RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF26 (Homo sapiens)

Ensembl gene IDs: ENSG00000114790

Ensembl transcript IDs: ENST00000356448.8, ENST00000465093.6, ENST00000465817.1, ENST00000483068.1, ENST00000496710.5, ENST00000614308.3, ENST00000618535.3, ENST00000629129.2, ENST00000630534.1, ENST00000630729.2

Found 825 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTaGGGGCAGGAGTTAAGAGACCATCCTGGCCAACATGATGAAACC +
Preference number: 1 (lower is better)
Translates to: PSTWGGRGSPLWWIT*GQELRDHPGQHDET
Trigger: GGTTTCATCATGTTGGCCAGGATGGTCTCTTAACTCCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR TCA 90 bp TCTGTGTACCTCAGGAGGTCTGCAAGTGTGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAG +
Preference number: 1 (lower is better)
Translates to: SVYLRRSASVWLGKN*AVQTHCIQALLMRE
Trigger: CTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCACACACTTGCAGACCTCCTGAGGTACACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR CCA 90 bp GGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTaGACCATTGCTATTACTTCATTAACACAGTTGCTCAGATCTCAA +
Preference number: 1 (lower is better)
Translates to: GDGMLVLQTPTHLSL*TIAITSLTQLLRSQ
Trigger: TTGAGATCTGAGCAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR TCA 90 bp AGGGACTCTGAATACAGCAAGTTAAGGCTTTTAGTGCAAATAGAATaGATTCCCACTAAGGTCAAAAGGTTTCAATTGGGTACCATGCTG +
Preference number: 1 (lower is better)
Translates to: RDSEYSKLRLLVQIE*IPTKVKRFQLGTML
Trigger: CAGCATGGTACCCAATTGAAACCTTTTGACCTTAGTGGGAATTCATTCTATTTGCACTAAAAGCCTTAACTTGCTGTATTCAGAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR GCA 90 bp AATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTaGTATTACTTCATTAACACAGTTGCTCAGATCTCAAGGTACTCA +
Preference number: 1 (lower is better)
Translates to: NACFANPNTSFTVDH*YYFINTVAQISRYS
Trigger: TGAGTACCTTGAGATCTGAGCAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: SQHLGRPRISSLVDHLRALGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 2 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 2 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 2 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGCCGAGGTGACAGGGTaGAGGCTGTGTGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLAEVTG*RLCEPG
Trigger: GCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 2 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR TCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGGCTCATTGCCGAGGTaGCAGGGTGCAGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLGSLPR*QGAGCV
Trigger: CACACAGCCTGCACCCTGTCACCTCGGCAATGAGCC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR TCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 2 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 2 (lower is better)
Translates to: CIQALLMREQNNLASLKASKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 2 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTCCCACACTGGCTCATTaGCGAGGTGACAGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIPTLAH*RGDRVQ
Trigger: CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGG...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 90 bp CGTGCAAATCTTGCAGTAACAAAAGACCATCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAGCGTCCCATTCTCTCCACATTCTTA +
Preference number: 2 (lower is better)
Translates to: RANLAVTKDHLRDYT*VSSPSKRPILSTFL
Trigger: TAAGAATGTGGAGAGAATGGGACGCTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAGATGGTCTTTTGTTACTGCAAGATTTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR-3UTR GCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: LGHVTYRFESSNNVHFARLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 2 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTGTTAGAAGTCCCCAGTaGCCCACACTGGCTCATTGC +
Preference number: 2 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIVRSPQ*PTLAHC
Trigger: GCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCTTAGCGGACAGTAGTTaGGACATGTCACATACAGAT +
Preference number: 2 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCLADSS*DMSHTD
Trigger: ATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCACCATGCTGACTTCTTaGTATCTTTTAAGGCCTAAT +
Preference number: 2 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCTMLTS*YLLRPN
Trigger: ATTAGGCCTTAAAAGATACCAAGAAGTCAGCATGGT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: CIQALLMREQNNLASLKALSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGCACTTACCCCTCAACTaGGCTTCTGTAGCTTTACAA +
Preference number: 2 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLHLPLN*ASVALQ
Trigger: TTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTG...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR TCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 2 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR TCA 90 bp TGTAGTGTGTTCCAGCTAATTTCTATTTGGAAACGAGTTGGAACAGCTGAAAACCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: CSVFQLISIWKRVGTAENQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...GTTTTCAGCTGTTCCAACTCGTTTCCAAATAGAAATTAGCTGGAACACACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR GCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: LGHVTYRFESSNNVHFARVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR GCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 2 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR CAA 90 bp TGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTaGCCAGGTTTTATCCCTTTGTTAAAGCAAATAGAACAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: WDMSHTDLSPPIMYT*PGFIPLLKQIEQRG
Trigger: CCCTCTCTGTTCTATTTGCTTTAACAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 2 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR CAA 90 bp GATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTaGTTAAAGCAAATAGAACAGAGAGGGAATATAGCTGCCAGTAAA +
Preference number: 2 (lower is better)
Translates to: DLSPPIMYTLPGFIP*LKQIEQRGNIAASK
Trigger: TTTACTGGCAGCTATATTCCCTCTCTGTTCTATTTGCTTTAACAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR TCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTACGAGTTGGAACAGCTaGAAACTAGGTATTATTGAA +
Preference number: 2 (lower is better)
Translates to: CFANPNTSFTVDHCYYFITSWNS*KLGIIE
Trigger: TTCAATAATACCTAGTTTTCAGCTGTTCCAACTCGT...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR CAA 90 bp ACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTaGCTCAGATCTCAAGGTACTCACGGTCTGAAATATATTTTACAA +
Preference number: 2 (lower is better)
Translates to: THLSLWTIAITSLTQ*LRSQGTHGLKYILQ
Trigger: TTGTAAAATATATTTCAGACCGTGAGTACCTTGAGATCTGAGCAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 2 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR CCA 72 bp GCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTaGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGT +
Preference number: 3 (lower is better)
Translates to: AIQGLEVPSAPH*LIAEVTGCRLC
Trigger: ACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAG +
Preference number: 3 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRLRDYT*VSSPSK
Trigger: CTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR TCA 72 bp TGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTaGGGGCAGGAGTTAAGAGACCATCCTGGCCAACAT +
Preference number: 3 (lower is better)
Translates to: WGGRGSPLWWIT*GQELRDHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCTTAACTCCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CAA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACTTATCAATTGTAGCTaGACATGTTATCTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRLINCS*TCYLLG
Trigger: GCCAAGGAGATAACATGTCAAGCTACAATTGATAAG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAG +
Preference number: 3 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSLRDYT*VSSPSK
Trigger: CTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR TCA 72 bp CTCAGGAGGTCTGCAAGTGTGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGTATCCAAGCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: LRRSASVWLGKN*AVQTHCIQALL
Trigger: GAGAAGAGCTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCACACACTTGCAGACCTCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CAA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCATGTCACATACAGATTaGAGTCCTCCAATAATGTAC +
Preference number: 3 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCMSHTD*SPPIMY
Trigger: GTACATTATTGGAGGACTCAAATCTGTATGTGACAT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTACAGATATACAATCTaGCTAATACTGGGAGAACCA +
Preference number: 3 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSYRYTI*LILGEP
Trigger: TGGTTCTCCCAGTATTAGCAAGATTGTATATCTGTA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR TCA 72 bp CTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTTGAAGTTAACGAAGCA +
Preference number: 3 (lower is better)
Translates to: LGRGLEKQQLTF*TLPVPFEVNEA
Trigger: TGCTTCGTTAACTTCAAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR TCA 72 bp CCAGCTAATTTCTATTTGGAAACGAGTTGGAACAGCTaGAAACTAGGTATTATTGAAGGCAAAGCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: PANFYLETSWNS*KLGIIEGKAAS
Trigger: TGAGGCTGCTTTGCCTTCAATAATACCTAGTTTTCAGCTGTTCCAACTCGTTTCCAAATAGAAATTAGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
3UTR CCA 72 bp ATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTaGACCATTGCTATTACTTCATTAACACAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: MLVLQTPTHLSL*TIAITSLTQLL
Trigger: GAGCAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTTATCAATTGTAGCTaGACATGTTATCTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELINCS*TCYLLG
Trigger: GCCAAGGAGATAACATGTCAAGCTACAATTGATAAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
3UTR TCA 72 bp GACCCCTGTCCTATATTCAGGTTTTTCTCACATATATaGACCCATCTAAATTCTACGTTGTTAAAGGTAGCT +
Preference number: 3 (lower is better)
Translates to: DPCPIFRFFSHI*THLNSTLLKVA
Trigger: AGCTACCTTTAACAACGTAGAATTTAGATGGGTTCATATATGTGAGAAAAACCTGAATATAGGACAGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTACAGATATACAATCTaGCTAATACTGGGAGAACCA +
Preference number: 3 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNYRYTI*LILGEP
Trigger: TGGTTCTCCCAGTATTAGCAAGATTGTATATCTGTA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
3UTR TCA 72 bp GAATACAGCAAGTTAAGGCTTTTAGTGCAAATAGAATaGATTCCCACTAAGGTCAAAAGGTTTCAATTGGGT +
Preference number: 3 (lower is better)
Translates to: EYSKLRLLVQIE*IPTKVKRFQLG
Trigger: ACCCAATTGAAACCTTTTGACCTTAGTGGGAATTCATTCTATTTGCACTAAAAGCCTTAACTTGCTGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRLSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRTGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRTWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAGAGGCGGTGGGCACCTaGGCGGGAATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQEAVGT*AGICAA
Trigger: CGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTC...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCAGAACCTGGTGGGGCTaGGGAATCGACCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTRTWWG*GIDRLR
Trigger: GCGGAGGCGGTCGATTCCTCAGCCCCACCAGGTTCT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGCCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRRARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGCCACAGGTTCGGTCTaGAGGCGGCTTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAATGSV*RRLPAA
Trigger: AGCAGCGGGAAGCCGCCTGCAGACCGAACCTGTGGC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRACCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCATCCTGGAGGTGCGTTaGAACCGAGAACGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTILEVR*NRERAA
Trigger: CGCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGAT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATTCCACCTGGGTCAGTaGGGTTCGGTCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAFHLGQ*GSVCRR
Trigger: CCGCCTGCAGACCGAACCTCACTGACCCAGGTGGAA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGGCGCGCGGGGTCGTTaGCGGGGGCACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRGARGR*RGHRVR
Trigger: TCTCACTCTGTGCCCCCGGCAACGACCCCGCGCGCC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAACCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRARARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCCACACTGGCTCATTaGCGAGGTGACAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPTLAH*RGDRVQ
Trigger: CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGAGGCGGTGGGCACCTaGGCGGGAATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDREAVGT*AGICAA
Trigger: CGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAATGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQCCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRARQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAACACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRASYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQSGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGCCCACACTGGCTCATTaGCGAGGTGACAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQPTLAH*RGDRVQ
Trigger: CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGG...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCTGAATCCTGGAGGTaGGTTGAAACCGAGAACGCG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPESWR*VETENA
Trigger: CGCGTTCTCGGTTTCAACGCACCTCCAGGATTCAGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACACACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATTCCACCTGGGTCAGTaGGGTTCGGTCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRFHLGQ*GSVCRR
Trigger: CCGCCTGCAGACCGAACCTCACTGACCCAGGTGGAA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGGCTCATTGCCGAGGTaGCAGGGTGCAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRGSLPR*QGAGCV
Trigger: CACACAGCCTGCACCCTGTCACCTCGGCAATGAGCC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGGCGCGCGGGGTCGTTaGCGGGGGCACAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCGARGR*RGHRVR
Trigger: TCTCACTCTGTGCCCCCGGCAACGACCCCGCGCGCC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRSGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGTCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGTGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRASPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGTTAGTCTTGCCTTCTaGGGCTTGCAATGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAVSLAF*GLQCPG
Trigger: CCCCGGACATTGCAAGCCCCAGAAGGCAAGACTAAC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGGCAGAGCTCTGTCTTaGATAGAGCATTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRGRALS*IEHCGA
Trigger: AGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAACCTGAATCCTGGAGGTaGGTTGAAACCGAGAACGCG +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQPESWR*VETENA
Trigger: CGCGTTCTCGGTTTCAACGCACCTCCAGGATTCAGG...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR GCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTRRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAATCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATACTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWILSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGGGCAGAGCTCTGTCTTaGATAGAGCATTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQGRALS*IEHCGA
Trigger: AGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCC...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCTWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTCTGCATGGGGAGAATaGGAAAAGAGATCATGGGTA +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRSAWGE*EKRSWV
Trigger: TACCCATGATCTCTTTTCTCATTCTCCCCATGCAGA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGTGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCTWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATCCGGGCGCCCTCATTaGATAGTCGAACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRSGRPH*IVEPTC
Trigger: GCAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGCCGAGGTGACAGGGTaGAGGCTGTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGAEVTG*RLCEPG
Trigger: GCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGCCACAGGTTCGGTCTaGAGGCGGCTTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGATGSV*RRLPAA
Trigger: AGCAGCGGGAAGCCGCCTGCAGACCGAACCTGTGGC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGCCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAAAAGTAGCTGGGCGTaGTGGCATACTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRKSSWA*WHTLTI
Trigger: GATTGTAAGAGTATGCCACCACGCCCAGCTACTTTT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTTTGGATGTCCTTCTTaGGAAAAGCACAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRFGCPS*EKHSVF
Trigger: GAAGACACTGTGCTTTTCTCAAGAAGGACATCCAAA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAAAACTAGGTATTATTaGAGGCAAAGCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRKTRYY*RQSSLT
Trigger: CGTGAGGCTGCTTTGCCTTCAATAATACCTAGTTTT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATTTGGGGCTAGAAGTTaGGGACTAGTAGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRFGARS*GLVAEA
Trigger: CGCCTCAGCTACTAGTCCGCAACTTCTAGCCCCAAA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATACCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGRARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATACAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIQAASR*CVPGQL
Trigger: TAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTG...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKACCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATTGAATAGAGCATTGTaGAGCTGTTCTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRALNRAL*SCSSLE
Trigger: CTCCAGGGAAGAACAGCTCCACAATGCTCTATTCAA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGACTTTCTCATTCGCGTaGTTACTAAGGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRTFSFA*LLRTVR
Trigger: TCTGACAGTCCTTAGTAACCACGCGAATGAGAAAGT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAATACAAAAAGTAGCTaGGCGTGGTGGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRNTKSS*AWWHTL
Trigger: AAGAGTATGCCACCACGCCCAGCTACTTTTTGTATT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCATCCTGGAGGTGCGTTaGAACCGAGAACGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSILEVR*NRERAA
Trigger: CGCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGAT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGCTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMLSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTSWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSSGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRLFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRLEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSRARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSQAASR*CVPGQL
Trigger: TAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTACGACGTCAGCCACCTaGAGGGAGAGTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCTTSAT*RESSSG
Trigger: GCCAGATGAACTCTCCCTGCAGGTGGCTGACGTCGT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCGAGGCGGTGGGCACCTaGGCGGGAATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIEAVGT*AGICAA
Trigger: CGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTC...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGAGGAGCTCGTTCTCCTaGGAGGGCAGCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKRSSFS*EGSLWR
Trigger: CCTCCAAAGGCTGCCCTCCCAGGAGAACGAGCTCCT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATAAGGAGCTCGTTCTCCTaGGAGGGCAGCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIRSSFS*EGSLWR
Trigger: CCTCCAAAGGCTGCCCTCCCAGGAGAACGAGCTCCT...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRATFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGCAGTATTTCACATATaGGTCAAATGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRAVFHI*VKCGCC
Trigger: ACAGCATCCACATTTGACCCATATGTGAAATACTGC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTTCCTACAGTCTTCATaGGACTCAATCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRFLQSS*DSILDN
Trigger: ATTGTCAAGGATTGAGTCCCATGAAGACTGTAGGAA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACAAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAAATACAAAAAGTAGCTaGGCGTGGTGGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRANTKSS*AWWHTL
Trigger: AAGAGTATGCCACCACGCCCAGCTACTTTTTGTATT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCCCAGTGCCCCACACTaGCTCATTGCCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKPSAPH*LIAEVT
Trigger: TGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGCCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGAGAACCTGGTGGGGCTaGGGAATCGACCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARRTWWG*GIDRLR
Trigger: GCGGAGGCGGTCGATTCCTCAGCCCCACCAGGTTCT...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGAGAACCTGGTGGGGCTaGGGAATCGACCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMRTWWG*GIDRLR
Trigger: GCGGAGGCGGTCGATTCCTCAGCCCCACCAGGTTCT...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCCTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHILSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTCAAGATCTCCAAGCTaGGTAAATATGAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRSRSPS*VNMNVQ
Trigger: CTGAACATTCATATTTACTCAGCTTGGAGATCTTGA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAATGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAITGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKASYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLSGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRALEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTCCGGGCGCCCTCATTaGATAGTCGAACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCSGRPH*IVEPTC
Trigger: GCAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTGCCGAGGTGACAGGGTaGAGGCTGTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIAEVTG*RLCEPG
Trigger: GCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGC...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNATALR*APRSRG
Trigger: CCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAGGAGCTCGTTCTCCTaGGAGGGCAGCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSRSSFS*EGSLWR
Trigger: CCTCCAAAGGCTGCCCTCCCAGGAGAACGAGCTCCT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAGGAGCTCGTTCTCCTaGGAGGGCAGCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKARSSFS*EGSLWR
Trigger: CCTCCAAAGGCTGCCCTCCCAGGAGAACGAGCTCCT...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGTCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAESWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATCAAGATCTCCAAGCTaGGTAAATATGAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRASRSPS*VNMNVQ
Trigger: CTGAACATTCATATTTACTCAGCTTGGAGATCTTGA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACATCTGCATGGGGAGAATaGGAAAAGAGATCATGGGTA +
Preference number: 4 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTSAWGE*EKRSWV
Trigger: TACCCATGATCTCTTTTCTCATTCTCCCCATGCAGA...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACACAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR TCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGGGCTCATTGCCGAGGTaGCAGGGTGCAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARGSLPR*QGAGCV
Trigger: CACACAGCCTGCACCCTGTCACCTCGGCAATGAGCC...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCRRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACCTTCAAGGCTCTTTTaGAGACTTCATACTTCGGAG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRPSRLF*RLHTSE
Trigger: CTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCCGGGCGCCCTCATTaGATAGTCGAACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSGRPH*IVEPTC
Trigger: GCAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCACGACGTCAGCCACCTaGAGGGAGAGTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSTTSAT*RESSSG
Trigger: GCCAGATGAACTCTCCCTGCAGGTGGCTGACGTCGT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCGCCGAGGTGACAGGGTaGAGGCTGTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIAEVTG*RLCEPG
Trigger: GCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGC...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAACGGAATGCTTGTTTTaGAAACCCCAACACATCTTT +
Preference number: 4 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQTECLF*KPQHIF
Trigger: AAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCTGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHICCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGCGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACCCAGTGCCCCACACTaGCTCATTGCCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLPSAPH*LIAEVT
Trigger: TGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCACACATCTTTCACTGTaGACCATTGCTATTACTTCA +
Preference number: 4 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTTHLSL*TIAITS
Trigger: TGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGTTAGTCTTGCCTTCTaGGGCTTGCAATGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKVSLAF*GLQCPG
Trigger: CCCCGGACATTGCAAGCCCCAGAAGGCAAGACTAAC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCGTTAGTCTTGCCTTCTaGGGCTTGCAATGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCVSLAF*GLQCPG
Trigger: CCCCGGACATTGCAAGCCCCAGAAGGCAAGACTAAC...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNLSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRSWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGGCAGAGCTCTGTCTTaGATAGAGCATTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCGRALS*IEHCGA
Trigger: AGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTTTGGGGCTAGAAGTTaGGGACTAGTAGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKFGARS*GLVAEA
Trigger: CGCCTCAGCTACTAGTCCGCAACTTCTAGCCCCAAA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATGGCGGGAATCTGCGCTaGGAGGAGCGTCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYGGNLR*EERPSV
Trigger: GACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCC...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCGTTCGGGGTCCTTTaGCTTCCGGCCGGACTGCGA +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPFGVL*LPAGLR
Trigger: TCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCLFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGRRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCCGGGCGCCCTCATTaGATAGTCGAACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKASGRPH*IVEPTC
Trigger: GCAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLRARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGGCCGAGGTGACAGGGTaGAGGCTGTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLAEVTG*RLCEPG
Trigger: GCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGC...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAAAAGAGGTGACGGAATaGTTGTTTTGCAAACCCCAA +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRKEVTE*LFCKPQ
Trigger: TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTTGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFICCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIECCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCTAACGATTTCCACCTaGGTCAGTGAGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCLTIST*VSEVRS
Trigger: AGACCGAACCTCACTGACCCAGGTGGAAATCGTTAG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR CCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATTAGCGGACAGTAGTTaGGACATGTCACATACAGAT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRLADSS*DMSHTD
Trigger: ATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKPLPRG*PGSGTE
Trigger: TTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
3UTR CAA 72 bp CTTGCAGTAACAAAAGACCATCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAGCGTCCCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LAVTKDHLRDYT*VSSPSKRPILS
Trigger: GGAGAGAATGGGACGCTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAGATGGTCTTTTGTTACTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKLSSPA*PRGPPR
Trigger: CCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGGCAGAGCTCTGTCTTaGATAGAGCATTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGGRALS*IEHCGA
Trigger: AGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAATTCCACCTGGGTCAGTaGGGTTCGGTCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQFHLGQ*GSVCRR
Trigger: CCGCCTGCAGACCGAACCTCACTGACCCAGGTGGAA...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGACGAGTTGGAACAGCTaGAAACTAGGTATTATTGAA +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAETSWNS*KLGIIE
Trigger: TTCAATAATACCTAGTTTTCAGCTGTTCCAACTCGT...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAAGGCTCATTGCCGAGGTaGCAGGGTGCAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQGSLPR*QGAGCV
Trigger: CACACAGCCTGCACCCTGTCACCTCGGCAATGAGCC...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNTGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATACTGGGGCCTCGGCTTaGTCCGGCCCAGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYTGASA*SGPEPG
Trigger: ACCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGT...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNTWAGI*AARSVP
Trigger: AGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAAGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAGCGGCAAGGCCATTTaGAGTGGGCGAAGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIESGKAI*SGRRHR
Trigger: CCGGTGCCTTCGCCCACTGCAAATGGCCTTGCCGCT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCLFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTCGGGCTCGCTCGCTCTaGGTCTCAGCTCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIRARSL*VSAPSS
Trigger: GCTACTAGGAGCTGAGACGCAGAGCGAGCGAGCCCG...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQQAASR*CVPGQL
Trigger: TAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTG...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCAGGATTCAAATAGTTaGTTTTTAGCTTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEQDSNS*FLASTG
Trigger: CCCAGTTGAAGCTAAAAAGCAACTATTTGAATCCTG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTGCTGTCCGAGGCGGTaGGCACCTGGGCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNCCPRR*APGRES
Trigger: AGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNHRAIC*GFRGAA
Trigger: GGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGCAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCAAGGCCATTTGCAGTaGGCGAAGGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEQGHLQ*AKAPGW
Trigger: CCAGCCCGGTGCCTTCGCCCACTGCAAATGGCCTTG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGCAGTATTTCACATATaGGTCAAATGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRAVFHI*VKCGCC
Trigger: ACAGCATCCACATTTGACCCATATGTGAAATACTGC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCTAACGATTTCCACCTaGGTCAGTGAGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGLTIST*VSEVRS
Trigger: AGACCGAACCTCACTGACCCAGGTGGAAATCGTTAG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGCCCAGTGCCCCACACTaGCTCATTGCCGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLPSAPH*LIAEVT
Trigger: TGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGG...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGCCATGCTGCGCACCTTaGGGAGTCTCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLPCCAP*GVSCGA
Trigger: AGCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGG...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACATTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTLSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGGTCACCGCGCCATTTaGTGGGGATTTCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNGHRAI*WGFRGA
Trigger: GGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKAFRPD*EPDPGE
Trigger: CTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKALFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNQAASR*CVPGQL
Trigger: TAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAATGCCGTCCCACCATTaGCCACCGCTCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKMPSHH*PPLSAG
Trigger: CCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCAT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTAGTGTGTTCCAGCTAATTTCTATTTGGAAACGAGTTGGAACAGCTGAAAACGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSVFQLISIWKRVGTAENGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...GTTTTCAGCTGTTCCAACTCGTTTCCAAATAGAAATTAGCTGGAACACACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGAGGAGCTCGTTCTCCTaGGAGGGCAGCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLRSSFS*EGSLWR
Trigger: CCTCCAAAGGCTGCCCTCCCAGGAGAACGAGCTCCT...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTTGAATAGAGCATTGTaGAGCTGTTCTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCLNRAL*SCSSLE
Trigger: CTCCAGGGAAGAACAGCTCCACAATGCTCTATTCAA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCACTTACCCCTCAACTaGGCTTCTGTAGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCHLPLN*ASVALQ
Trigger: TTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGGTTAGTCTTGCCTTCTaGGGCTTGCAATGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARVSLAF*GLQCPG
Trigger: CCCCGGACATTGCAAGCCCCAGAAGGCAAGACTAAC...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTTTGGGGAGCTTGGGTaGCTTGGGCCGTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNFGELG*LGPSKS
Trigger: CGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTCCAGACTCTTCGGAATaGTCTGCTGCTTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIPDSSE*SAASPL
Trigger: AAGTGGGGAAGCAGCAGATCATTCCGAAGAGTCTGG...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCTGCATGGGGAGAATaGGAAAAGAGATCATGGGTA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSAWGE*EKRSWV
Trigger: TACCCATGATCTCTTTTCTCATTCTCCCCATGCAGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATTCCACCTGGGTCAGTaGGGTTCGGTCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKFHLGQ*GSVCRR
Trigger: CCGCCTGCAGACCGAACCTCACTGACCCAGGTGGAA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR TCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNSYVPS*CPRRWA
Trigger: TGCCCACCGCCTCGGACAGCAGGACGGTACATAGGA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACCTGTACTCCGGGGATaGCGTCCCACCATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKPVLRG*RPTIGH
Trigger: GTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLLFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATACCTTCAAGGCTCTTTTaGAGACTTCATACTTCGGAG +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIPSRLF*RLHTSE
Trigger: CTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGG...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCTTCAAGGCTCTTTTaGAGACTTCATACTTCGGAG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPSRLF*RLHTSE
Trigger: CTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTACGACGTCAGCCACCTaGAGGGAGAGTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFITTSAT*RESSSG
Trigger: GCCAGATGAACTCTCCCTGCAGGTGGCTGACGTCGT...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMLGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCACACTGGCTCATTaGCGAGGTGACAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYPTLAH*RGDRVQ
Trigger: CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGG...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGTTAGAAGTCCCCAGTaGCCCACACTGGCTCATTGC +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLVRSPQ*PTLAHC
Trigger: GCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTGTTAGAAGTCCCCAGTaGCCCACACTGGCTCATTGC +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLVRSPQ*PTLAHC
Trigger: GCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGGAGCTTGGGTGACTTaGGCCGTCGAAGTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNGAWVT*AVEVEE
Trigger: CTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKRQAPL*GAWVTW
Trigger: CCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCCCTGCGATAAGACGTaGACCGCAAGCCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNPCDKT*TASLSA
Trigger: TGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTTGAATAGAGCATTGTaGAGCTGTTCTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKLNRAL*SCSSLE
Trigger: CTCCAGGGAAGAACAGCTCCACAATGCTCTATTCAA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACTAACGATTTCCACCTaGGTCAGTGAGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLLTIST*VSEVRS
Trigger: AGACCGAACCTCACTGACCCAGGTGGAAATCGTTAG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNAGLRT*PRRVVI
Trigger: AATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTCAAAATCAAAGCCACTaGCCACTGCCCTGCGATAAG +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIQNQSH*PLPCDK
Trigger: CTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTG...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCTGCATGGGGAGAATaGGAAAAGAGATCATGGGTA +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKASAWGE*EKRSWV
Trigger: TACCCATGATCTCTTTTCTCATTCTCCCCATGCAGA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTTTGGATGTCCTTCTTaGGAAAAGCACAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKFGCPS*EKHSVF
Trigger: GAAGACACTGTGCTTTTCTCAAGAAGGACATCCAAA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACTGCTTAGCAGTAAATaGCCTAACGATTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKALLSSK*PNDFHL
Trigger: CAGGTGGAAATCGTTAGGTCATTTACTGCTAAGCAG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCGGAGCCCTGCTGAATTaGAGCTTAGGAAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIGALLN*SLGSPE
Trigger: TTCAGGGCTTCCTAAGCTGCAATTCAGCAGGGCTCC...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTTTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGTTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGAGAGTTCATCTGGCTaGTTAGCAGTAAATGACCTA +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGESSSG*LAVNDL
Trigger: TAGGTCATTTACTGCTAAGCAGCCAGATGAACTCTC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATACGACGTCAGCCACCTaGAGGGAGAGTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNTTSAT*RESSSG
Trigger: GCCAGATGAACTCTCCCTGCAGGTGGCTGACGTCGT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATAAAAGAGGTGACGGAATaGTTGTTTTGCAAACCCCAA +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIKEVTE*LFCKPQ
Trigger: TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTT...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTGGAAGCCCTGAATCCTaGAGGTGCGTTGAAACCGAG +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIGSPES*RCVETE
Trigger: CTCGGTTTCAACGCACCTCCAGGATTCAGGGCTTCC...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGGAAGCCCTGAATCCTaGAGGTGCGTTGAAACCGAG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEGSPES*RCVETE
Trigger: CTCGGTTTCAACGCACCTCCAGGATTCAGGGCTTCC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGTCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATC +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLSPQRP*AIHVVI
Trigger: GATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGA...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKTFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGTFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTTCCTACAGTCTTCATaGGACTCAATCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCFLQSS*DSILDN
Trigger: ATTGTCAAGGATTGAGTCCCATGAAGACTGTAGGAA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGACTTTCTCATTCGCGTaGTTACTAAGGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKTFSFA*LLRTVR
Trigger: TCTGACAGTCCTTAGTAACCACGCGAATGAGAAAGT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCCACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAAAAGTAGCTGGGCGTaGTGGCATACTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSKSSWA*WHTLTI
Trigger: GATTGTAAGAGTATGCCACCACGCCCAGCTACTTTT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAAAAGTAGCTGGGCGTaGTGGCATACTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAKSSWA*WHTLTI
Trigger: GATTGTAAGAGTATGCCACCACGCCCAGCTACTTTT...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGTTAGTCTTGCCTTCTaGGGCTTGCAATGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEVSLAF*GLQCPG
Trigger: CCCCGGACATTGCAAGCCCCAGAAGGCAAGACTAAC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKASWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTCAAGATCTCCAAGCTaGGTAAATATGAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCSRSPS*VNMNVQ
Trigger: CTGAACATTCATATTTACTCAGCTTGGAGATCTTGA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAAAACTAGGTATTATTaGAGGCAAAGCAGCCTCACG +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSKTRYY*RQSSLT
Trigger: CGTGAGGCTGCTTTGCCTTCAATAATACCTAGTTTT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTACGAGTTGGAACAGCTaGAAACTAGGTATTATTGAA +
Preference number: 4 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCTSWNS*KLGIIE
Trigger: TTCAATAATACCTAGTTTTCAGCTGTTCCAACTCGT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGGTAGACTTTGTGAGATaGGTGGGCAGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLVDFVR*VGSSAE
Trigger: CTCTGCGCTACTGCCCACGCATCTCACAAAGTCTAC...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIERRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGAGAGTTCATCTGGCTaGTTAGCAGTAAATGACCTA +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAESSSG*LAVNDL
Trigger: TAGGTCATTTACTGCTAAGCAGCCAGATGAACTCTC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTAGGAAGCAGAGGTTaGAGTGGGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELGSRG*SGPRSH
Trigger: GTGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATGTTAGAAGTCCCCAGTaGCCCACACTGGCTCATTGC +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYVRSPQ*PTLAHC
Trigger: GCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATAACGGAATGCTTGTTTTaGAAACCCCAACACATCTTT +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWITECLF*KPQHIF
Trigger: AAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATAGCAGTATTTCACATATaGGTCAAATGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIAVFHI*VKCGCC
Trigger: ACAGCATCCACATTTGACCCATATGTGAAATACTGC...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGCAGTATTTCACATATaGGTCAAATGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKAVFHI*VKCGCC
Trigger: ACAGCATCCACATTTGACCCATATGTGAAATACTGC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATATTCCTACAGTCTTCATaGGACTCAATCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIFLQSS*DSILDN
Trigger: ATTGTCAAGGATTGAGTCCCATGAAGACTGTAGGAA...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCAAGATCTCCAAGCTaGGTAAATATGAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSRSPS*VNMNVQ
Trigger: CTGAACATTCATATTTACTCAGCTTGGAGATCTTGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTCAAGATCTCCAAGCTaGGTAAATATGAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGSRSPS*VNMNVQ
Trigger: CTGAACATTCATATTTACTCAGCTTGGAGATCTTGA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGGCAGAGCTCTGTCTTaGATAGAGCATTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEGRALS*IEHCGA
Trigger: AGCTCCACAATGCTCTATTCAAGACAGAGCTCTGCC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCTTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCLSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKLSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFISKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIESKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSLEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNRRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATCCGGGCGCCCTCATTaGATAGTCGAACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKSGRPH*IVEPTC
Trigger: GCAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATCCGAAGAACTTTTCTaGGGCCCAGGAAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKSEELF*GPGKSP
Trigger: GGGGCTCTTTCCTGGGCCCCAGAAAAGTTCTTCGGA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATGGGAGGGCAGCCTTTaGAGGGGGAGTTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKWEGSL*RGSFCS
Trigger: GGAACAAAAACTCCCCCTCCAAAGGCTGCCCTCCCA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTAACGATTTCCACCTaGGTCAGTGAGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELTIST*VSEVRS
Trigger: AGACCGAACCTCACTGACCCAGGTGGAAATCGTTAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR CCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGAAAAGTAGCTGGGCGTaGTGGCATACTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARKSSWA*WHTLTI
Trigger: GATTGTAAGAGTATGCCACCACGCCCAGCTACTTTT...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTAGCGGACAGTAGTTaGGACATGTCACATACAGAT +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLLADSS*DMSHTD
Trigger: ATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTCCAAGCTCTTCTCATaGGAGAGCAGAACAACCTGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNSKLFS*ESRTTW
Trigger: CCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGTAGACTTTGTGAGATaGGTGGGCAGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKVDFVR*VGSSAE
Trigger: CTCTGCGCTACTGCCCACGCATCTCACAAAGTCTAC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATTCGGAATGATCTGCTaGTTCCCCACTTTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKFGMIC*FPTLRA
Trigger: CGCCCTCAAAGTGGGGAAGCAGCAGATCATTCCGAA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCTCTTCGGAATGATCTaGTGCTTCCCCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYLFGMI*CFPTLR
Trigger: CCTCAAAGTGGGGAAGCAGCAGATCATTCCGAAGAG...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLLEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAAGGCGGGTCACCCTCTaGATGGGGAGAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKRRVTL*MGRMRK
Trigger: TTTTCTCATTCTCCCCATGCAGAGGGTGACCCGCCT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGAAAGAGGTGACGGAATaGTTGTTTTGCAAACCCCAA +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARKEVTE*LFCKPQ
Trigger: TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTT...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMTFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTTTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTTCTCATTCGCGTaGTTACTAAGGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAITFSFA*LLRTVR
Trigger: TCTGACAGTCCTTAGTAACCACGCGAATGAGAAAGT...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACACTATACTCTAGCCTaGGCGACAGAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKHYTLA*ATEVGK
Trigger: TTTCCCCACCTCTGTCGCCCAGGCTAGAGTATAGTG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATAAGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNKQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCCCACTGCAACCTCTGCTT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTAGCGGACAGTAGTTaGGACATGTCACATACAGAT +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARLADSS*DMSHTD
Trigger: ATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCCACTTACCCCTCAACTaGGCTTCTGTAGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIHLPLN*ASVALQ
Trigger: TTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTG...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 72 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTaGAGTCCTCCAATAATGTACACTTTGCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTD*SPPIMYTLPGF
Trigger: AAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 72 bp GCGTCCCATTCTCTCCACATTCTTATCAATTGTAGCTaGACATGTTATCTCCTTGGCACATTCCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASHSLHILINCS*TCYLLGTFHRK
Trigger: TTTCCTATGGAATGTGCCAAGGAGATAACATGTCAAGCTACAATTGATAAGAATGTGGAGAGAATGGGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR TCA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCTGCTTAGCAGTAAATaGCCTAACGATTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIELLSSK*PNDFHL
Trigger: CAGGTGGAAATCGTTAGGTCATTTACTGCTAAGCAG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CIQALLMREQNNLASLKAKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACCTTCAAGGCTCTTTTaGAGACTTCATACTTCGGAG +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQPSRLF*RLHTSE
Trigger: CTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGG...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGATCCCTGAAGTGAACTaGTCAGCTATTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEIPEVN*SAILCT
Trigger: GGTACACAGAATAGCTGAGCAGTTCACTTCAGGGAT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTAGTGTGTTCCAGCTAATTTCTATTTGGAAACGAGTTGGAACAGCTGAAAACAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: CSVFQLISIWKRVGTAENRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...GTTTTCAGCTGTTCCAACTCGTTTCCAAATAGAAATTAGCTGGAACACACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAGAGTTGGCTCCATGTaGATCTCAATGGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIRVGSM*ISMAYG
Trigger: ACCATAAGCCATTGAGATCCACATGGAGCCAACTCT...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTAATACAAAAAGTAGCTaGGCGTGGTGGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLNTKSS*AWWHTL
Trigger: AAGAGTATGCCACCACGCCCAGCTACTTTTTGTATT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGTTAGCGGACAGTAGTTaGGACATGTCACATACAGAT +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLLADSS*DMSHTD
Trigger: ATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTCACTTACCCCTCAACTaGGCTTCTGTAGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIHLPLN*ASVALQ
Trigger: TTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTG...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGCACTTACCCCTCAACTaGGCTTCTGTAGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLHLPLN*ASVALQ
Trigger: TTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTG...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTTGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTCCTGGCTTACTGTCTaGGATAATCCCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIESWLTV*DNPFLF
Trigger: GAAAAGAAAGGGATTATCTCAGACAGTAAGCCAGGA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTCTGCATGGGGAGAATaGGAAAAGAGATCATGGGTA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNSAWGE*EKRSWV
Trigger: TACCCATGATCTCTTTTCTCATTCTCCCCATGCAGA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAATTTGGATGTCCTTCTTaGGAAAAGCACAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQFGCPS*EKHSVF
Trigger: GAAGACACTGTGCTTTTCTCAAGAAGGACATCCAAA...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGTTTGGATGTCCTTCTTaGGAAAAGCACAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLFGCPS*EKHSVF
Trigger: GAAGACACTGTGCTTTTCTCAAGAAGGACATCCAAA...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCTGCTTAGCAGTAAATaGCCTAACGATTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYLLSSK*PNDFHL
Trigger: CAGGTGGAAATCGTTAGGTCATTTACTGCTAAGCAG...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGTGGTTAGGTAAAAACTaGGCTGTGCAAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEWLGKN*AVQTHC
Trigger: ACAGTGAGTTTGCACAGCTCAGTTTTTACCTAACCA...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCAACAGCTCACCTTCTaGACTCTACCAGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNQQLTF*TLPVPF
Trigger: AAAAGGAACTGGTAGAGTTCAGAAGGTGAGCTGTTG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTTTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLLEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCCTTCAAGGCTCTTTTaGAGACTTCATACTTCGGAG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNPSRLF*RLHTSE
Trigger: CTCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAAGAGAGTTCATCTGGCTaGTTAGCAGTAAATGACCTA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQESSSG*LAVNDL
Trigger: TAGGTCATTTACTGCTAAGCAGCCAGATGAACTCTC...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGACCTTTCTCTCTCTGTaGACTAGTGGAAAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMTFLSL*TSGKSK
Trigger: TTTACTTTTTCCACTAGTGCACAGAGAGAGAAAGGT...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACGGAATGCTTGTTTTaGAAACCCCAACACATCTTT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTECLF*KPQHIF
Trigger: AAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGAAAGAGGTGACGGAATaGTTGTTTTGCAAACCCCAA +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLKEVTE*LFCKPQ
Trigger: TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTT...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTCAGGATTCAAATAGTTaGTTTTTAGCTTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIQDSNS*FLASTG
Trigger: CCCAGTTGAAGCTAAAAAGCAACTATTTGAATCCTG...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATTCACCGCAGAGAGTTaGCTCCATGTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKFTAES*LHVDLN
Trigger: ATTGAGATCCACATGGAGCCAACTCTCTGCGGTGAA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGGAGCTGTTCTTCCCTaGAGAAGAATTAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNGAVLP*RRIKLF
Trigger: GAAGAGCTTAATTCTTCTCCAGGGAAGAACAGCTCC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACTTTCTCATTCGCGTaGTTACTAAGGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETFSFA*LLRTVR
Trigger: TCTGACAGTCCTTAGTAACCACGCGAATGAGAAAGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATAAAAGTAGCTGGGCGTaGTGGCATACTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNKSSWA*WHTLTI
Trigger: GATTGTAAGAGTATGCCACCACGCCCAGCTACTTTT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAAAATACAAAAAGTAGCTaGGCGTGGTGGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQNTKSS*AWWHTL
Trigger: AAGAGTATGCCACCACGCCCAGCTACTTTTTGTATT...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACACATCTTTCACTGTaGACCATTGCTATTACTTCA +
Preference number: 4 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAITHLSL*TIAITS
Trigger: TGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGT...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 72 bp TCACTGTGGACCATTGCTATTACTTCATTAACACAGTaGCTCAGATCTCAAGGTACTCACGGTCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: SLWTIAITSLTQ*LRSQGTHGLKY
Trigger: ATATTTCAGACCGTGAGTACCTTGAGATCTGAGCAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 72 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTaGTTTTGCAAACCCCAACACATCTTTCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTEC*FCKPQHIFHCG
Trigger: TCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTTGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTTTGGATGTCCTTCTTaGGAAAAGCACAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNFGCPS*EKHSVF
Trigger: GAAGACACTGTGCTTTTCTCAAGAAGGACATCCAAA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACTGCTTAGCAGTAAATaGCCTAACGATTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKLLSSK*PNDFHL
Trigger: CAGGTGGAAATCGTTAGGTCATTTACTGCTAAGCAG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR GCA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGTAAAAACTGAGCTGTaGAAACTCACTGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEVKTEL*KLTVSK
Trigger: CTTGGATACAGTGAGTTTGCACAGCTCAGTTTTTAC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCACCTTTCTCTCTCTGTaGACTAGTGGAAAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: CDIIKEVTECLFCKPQHITFLSL*TSGKSK
Trigger: TTTACTTTTTCCACTAGTGCACAGAGAGAGAAAGGT...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTCACTGTGGACCATTaGTATTACTTCATTAACACA +
Preference number: 4 (lower is better)
Translates to: LGHVTYRFESSNNVHFARFTVDH*YYFINT
Trigger: TGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAA...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTTCACTGTGGACCATTaGTATTACTTCATTAACACA +
Preference number: 4 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMFTVDH*YYFINT
Trigger: TGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAA...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGCAGGATTCAAATAGTTaGTTTTTAGCTTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLQDSNS*FLASTG
Trigger: CCCAGTTGAAGCTAAAAAGCAACTATTTGAATCCTG...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CCA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACACATCTTTCACTGTaGACCATTGCTATTACTTCA +
Preference number: 4 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTHLSL*TIAITS
Trigger: TGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp TGTAGTGTGTTCCAGCTAATTTCTATTTGGAAACGAGTTGGAACAGCTGAAAACTGGGGCTCCACATTTTaGTTGTTGGATTTACTTATT +
Preference number: 4 (lower is better)
Translates to: CSVFQLISIWKRVGTAENWGSTF*LLDLLI
Trigger: AATAAGTAAATCCAACAATCAAAATGTGGAGCCCCA...GTTTTCAGCTGTTCCAACTCGTTTCCAAATAGAAATTAGCTGGAACACACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATATGGGACTCAATCCTTaGCAATACTTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNMGLNP*QYFLKG
Trigger: TCCTTTAAGGAAGTATTGTCAAGGATTGAGTCCCAT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR TCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAATTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQLSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGAGAGTTCATCTGGCTaGTTAGCAGTAAATGACCTA +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKESSSG*LAVNDL
Trigger: TAGGTCATTTACTGCTAAGCAGCCAGATGAACTCTC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000614308.3
ENST00000618535.3
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAACTTTCAGAACAGGCTaGGACATTCTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKTFRTG*DILFFF
Trigger: GAAGAAGAACAGAATGTCCCAGCCTGTTCTGAAAGT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACCATGCTGACTTCTTaGTATCTTTTAAGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETMLTS*YLLRPN
Trigger: ATTAGGCCTTAAAAGATACCAAGAAGTCAGCATGGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGACACATCTTTCACTGTaGACCATTGCTATTACTTCA +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLTHLSL*TIAITS
Trigger: TGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGT...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
3UTR CAA 72 bp CCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTaGTTAAAGCAAATAGAACAGAGAGGGAATATAGCT +
Preference number: 4 (lower is better)
Translates to: PPIMYTLPGFIP*LKQIEQRGNIA
Trigger: AGCTATATTCCCTCTCTGTTCTATTTGCTTTAACAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR TCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATTTATCAATTGTAGCTTaGCATGTTATCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNLSIVA*HVISLA
Trigger: TGCCAAGGAGATAACATGTCAAGCTACAATTGATAA...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATTGGAGAAAAGATGGTaGCTCTCGGTTTTAGTCATT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKLEKRW*LSVLVI
Trigger: AATGACTAAAACCGAGAGGCACCATCTTTTCTCCAA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGTGTCGTGCAAATCTTaGAGTAACAAAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKVSCKS*SNKRPS
Trigger: AGATGGTCTTTTGTTACTGCAAGATTTGCACGACAC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGTTCACTGTGGACCATTaGTATTACTTCATTAACACA +
Preference number: 4 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLFTVDH*YYFINT
Trigger: TGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAA...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAATTCACTGTGGACCATTaGTATTACTTCATTAACACA +
Preference number: 4 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQFTVDH*YYFINT
Trigger: TGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAA...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR GCA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATCAGGATTCAAATAGTTaGTTTTTAGCTTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNQDSNS*FLASTG
Trigger: CCCAGTTGAAGCTAAAAAGCAACTATTTGAATCCTG...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGCAGTATTTCACATATaGGTCAAATGTGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKAVFHI*VKCGCC
Trigger: ACAGCATCCACATTTGACCCATATGTGAAATACTGC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAATTCCTACAGTCTTCATaGGACTCAATCCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKFLQSS*DSILDN
Trigger: ATTGTCAAGGATTGAGTCCCATGAAGACTGTAGGAA...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CCA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATACCATGCTGACTTCTTaGTATCTTTTAAGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: HVTYRFESSNNVHFARFYTMLTS*YLLRPN
Trigger: ATTAGGCCTTAAAAGATACCAAGAAGTCAGCATGGT...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGGTAGACTTCATTTGTaGAGTATTTCACATATGGGT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKGRLHL*SISHMG
Trigger: ACCCATATGTGAAATACTGCACAAATGAAGTCTACC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR GCA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAAAAGAACTTTTTGCTTaGCTCACAGACATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKKELFA*LTDICN
Trigger: ATTACAGATGTCTGTGAGGCAAGCAAAAAGTTCTTT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS CCA 90 bp AACCGGCGGCGGCGGCGGCGCAGGCAAGGTCACCGCGCCATTTGCTaGGGATTTCGGGGAGCCGCCAGGCACCGCTTTGGGGAGCTTGGG +
Preference number: 5 (lower is better)
Translates to: NRRRRRRRQGHRAIC*GFRGAARHRFGELG
Trigger: CCCAAGCTCCCCAAAGCGGTGCCTGGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCTTGCCTGCGCCGCCGCCGCCGCCGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS CCA 90 bp GGGCTTGCAATGTCCGGGGCCGAGGAGCACCCACTACCCCGTGGGTaGCCCGGGTCCGGGACCGAAGCGCAGCCGCGAGAGCTTAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLAMSGAEEHPLPRG*PGSGTEAQPRELRR
Trigger: TCTCCTAAGCTCTCGCGGCTGCGCTTCGGTCCCGGACCCGGGCCACCCACGGGGTAGTGGGTGCTCCTCGGCCCCGGACATTGCAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS GCA 90 bp CTCTCCGCTGGGCGCCCAGAAGCAGGGGGCTCCTATGTACCGTCCTaGTGTCCGAGGCGGTGGGCACCTGGGCGGGAATCTGCGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LSAGRPEAGGSYVPS*CPRRWAPGRESALR
Trigger: TCGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCAGGACGGTACATAGGAGCCCCCTGCTTCTGGGCGCCCAGCGGAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS CCA 90 bp AGGGGGCTCCTATGTACCGTCCTGCTGTCCGAGGCGGTGGGCACCTaGGCGGGAATCTGCGCTGCGAGGAGCGTCCCTCCGTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: RGLLCTVLLSEAVGT*AGICAARSVPPSST
Trigger: GGTGGAGGACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCAGGACGGTACATAGGAGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS GCA 90 bp CTTGGGCCGTCGAAGTCGAGGAGAGGCAGCCCTGTACTCCGGGGATaGCGTCCCACCATTGGCCACCGCTCTCCGCTGGGCGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LGPSKSRRGSPVLRG*RPTIGHRSPLGAQK
Trigger: CTTCTGGGCGCCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATCCCCGGAGTACAGGGCTGCCTCTCCTCGACTTCGACGGCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS GCA 90 bp TGTACCGTCCTGCTGTCCGAGGCGGTGGGCACCTGGGCGGGAATCTaGGCTGCGAGGAGCGTCCCTCCGTCCTCCACCGGGAAATCCGTA +
Preference number: 5 (lower is better)
Translates to: CTVLLSEAVGTWAGI*AARSVPPSSTGKSV
Trigger: TACGGATTTCCCGGTGGAGGACGGAGGGACGCTCCTCGCAGCGCAGATTCCCGCCCAGGTGCCCACCGCCTCGGACAGCAGGACGGTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS GCA 90 bp GAGGACGACGTCAGCCACAGGTTCGGTCTGCAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTATCCAGCGGGCTCGCTCGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: EDDVSHRFGLQAASR*CVPGQLSSGLARSA
Trigger: CGCAGAGCGAGCGAGCCCGCTGGATAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTGCAGACCGAACCTGTGGCTGACGTCGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS CCA 90 bp CTGTACTCCGGGGATGCCGTCCCACCATTGGCCACCGCTCTCCGCTaGGCGCCCAGAAGCAGGGGGCTCCTATGTACCGTCCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LYSGDAVPPLATALR*APRSRGLLCTVLLS
Trigger: GGACAGCAGGACGGTACATAGGAGCCCCCTGCTTCTGGGCGCCCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATCCCCGGAGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS CCA 90 bp CCGCGCCATTTGCTGGGGATTTCGGGGAGCCGCCAGGCACCGCTTTaGGGAGCTTGGGTGACTTGGGCCGTCGAAGTCGAGGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRHLLGISGSRQAPL*GAWVTWAVEVEERQ
Trigger: CTGCCTCTCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGGCTCCCCGAAATCCCCAGCAAATGGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS GCA 90 bp TTTCCACCTGGGTCAGTGAGGTTCGGTCTGCAGGCGGCTTCCCGCTaGTGTGTCCCAGGGCAGTTATCCAGCGGGCTCGCTCGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: FPPGSVRFGLQAASR*CVPGQLSSGLARSA
Trigger: CGCAGAGCGAGCGAGCCCGCTGGATAACTGCCCTGGGACACAGCAGCGGGAAGCCGCCTGCAGACCGAACCTCACTGACCCAGGTGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000483068.1
ENST00000614308.3
ENST00000618535.3
ENST00000630534.1
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS TCA 90 bp CCTGGGCTATCCACGTCGTTATCGACCTCACTCTCCTCCCCTGCGTaGCCCAGGGGTCCTCCTAGGCCCTCCACCATGCTGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: PGLSTSLSTSLSSPA*PRGPPRPSTMLRTL
Trigger: CAAGGTGCGCAGCATGGTGGAGGGCCTAGGAGGACCCCTGGGTCACGCAGGGGAGGAGAGTGAGGTCGATAACGACGTGGATAGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAACCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS TCA 90 bp GAGCCCCCGTTCGGGGTCCTTTGCCTTCCGGCCGGACTGCGAACCTaGCCCAGGAGAGTCGTTATTAGCGGCAAGGCCATTTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EPPFGVLCLPAGLRT*PRRVVISGKAICSG
Trigger: CCCACTGCAAATGGCCTTGCCGCTAATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS GCA 90 bp TTGCCTGAGCTGGGTTCTGAGCTCCAGCGTTTTGGGGCTAGAAGTTaGGGACTAGTAGCTGAGGCGGCACGGGAGTGTAGGCGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: LPELGSELQRFGARS*GLVAEAARECRRAG
Trigger: CCCCGCGCGCCTACACTCCCGTGCCGCCTCAGCTACTAGTCCGCAACTTCTAGCCCCAAAACGCTGGAGCTCAGAACCCAGCTCAGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAAGGCGCGCGGGGTCGTaGCCGGGGGCACAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRRRAGS*PGAQSE
Trigger: CTCACTCTGTGCCCCCGGCAACGACCCCGCGCGCCT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGCTTGCCTTCTGGGGCTaGCAATGTCCGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQLAFWG*QCPGPR
Trigger: CCTCGGCCCCGGACATTGCAAGCCCCAGAAGGCAAG...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS CCA 90 bp TGCCCTGCGATAAGACGTGGACCGCAAGCCTCTCCGCAGAGACCCTaGGCTATCCACGTCGTTATCGACCTCACTCTCCTCCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: CPAIRRGPQASPQRP*AIHVVIDLTLLPCV
Trigger: CACGCAGGGGAGGAGAGTGAGGTCGATAACGACGTGGATAGCCCAGGGTCTCTGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQTALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQRSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS GCA 90 bp CCAGGAAAGAGCCCCCGTTCGGGGTCCTTTGCCTTCCGGCCGGACTaGGAACCTGACCCAGGAGAGTCGTTATTAGCGGCAAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: PGKSPRSGSFAFRPD*EPDPGESLLAARPF
Trigger: AAATGGCCTTGCCGCTAATAACGACTCTCCTGGGTCAGGTTCGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGGGGCTCTTTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQRSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRATMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCTTGCCTTCTGGGGCTaGCAATGTCCGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAELAFWG*QCPGPR
Trigger: CCTCGGCCCCGGACATTGCAAGCCCCAGAAGGCAAG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCTGAGCTCCAGCGTTTaGGGGCTAGAAGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTLSSSV*GLEVAD
Trigger: GTCCGCAACTTCTAGCCCCAAAACGCTGGAGCTCAG...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAERSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCCTAGGAAGCAGAGGTaGCAGTGGGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRPRKQR*QWAKIT
Trigger: TGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAGG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACACTTGCCTTCTGGGGCTaGCAATGTCCGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTLAFWG*QCPGPR
Trigger: CCTCGGCCCCGGACATTGCAAGCCCCAGAAGGCAAG...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRRSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACAAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTRSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCTTCCGGGCGCCCTCATaGCATAGTCGAACCAACTTG +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTFRAPS*HSRTNL
Trigger: CAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGAA...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCATTCCGGGCGCCCTCATaGCATAGTCGAACCAACTTG +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAFRAPS*HSRTNL
Trigger: CAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGAA...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGGCCATCGCTGACACGTaGATAGATGAGGACGACGTC +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQAIADT*IDEDDV
Trigger: GACGTCGTCCTCATCTATCAACGTGTCAGCGATGGC...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGCCATCGCTGACACGTaGATAGATGAGGACGACGTC +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAAIADT*IDEDDV
Trigger: GACGTCGTCCTCATCTATCAACGTGTCAGCGATGGC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS GCA 90 bp TGCCGGGGGCACAGAGTGAGAACAAGCAAGGGAGCCCTGCTGAATTaGAGCTTAGGAAGCCCTGAATCCTGGAGGTGCGTTGAAACCGAG +
Preference number: 5 (lower is better)
Translates to: CRGHRVRTSKGALLN*SLGSPESWRCVETE
Trigger: CTCGGTTTCAACGCACCTCCAGGATTCAGGGCTTCCTAAGCTGCAATTCAGCAGGGCTCCCTTGCTTGTTCTCACTCTGTGCCCCCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRFHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTGGCAGAGCTCTGTCTaGAATAGAGCATTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRWQSSV*NRALWS
Trigger: GCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGAACACCGAGTTAGTCTaGCCTTCTGGGGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRNTELV*PSGACN
Trigger: ATTGCAAGCCCCAGAAGGCAAGACTAACTCGGTGTT...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS GCA 90 bp CTTCTTCGAGCTGGTAGGACTGTCAAAATCAAAGCCACTGACCACTaGCCTGCGATAAGACGTGGACCGCAAGCCTCTCCGCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: LLRAGRTVKIKATDH*PAIRRGPQASPQRP
Trigger: GGGTCTCTGCGGAGAGGCTTGCGGTCCACGTCTTATCGCAGGGCAGTGGTCAGTGGCTTTGATTTTGACAGTCCTACCAGCTCGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000629129.2
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKADWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGGTCTTGAATAGAGCATaGTGGAGCTGTTCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRVLNRA*WSCSSL
Trigger: CAGGGAAGAACAGCTCCACAATGCTCTATTCAAGAC...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRARQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCGAGGTGACGGAATGCTaGTTTTGCAAACCCCAACAC +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTEVTEC*FCKPQH
Trigger: GTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTC...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCAACACCGAGTTAGTCTaGCCTTCTGGGGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTNTELV*PSGACN
Trigger: ATTGCAAGCCCCAGAAGGCAAGACTAACTCGGTGTT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS GCA 90 bp GGAGCCCTGCTGAATTGCAGCTTAGGAAGCCCTGAATCCTGGAGGTaGGTTGAAACCGAGAACGCGCGGCGTAGTAGACTTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GALLNCSLGSPESWR*VETENARRSRLCEM
Trigger: CATCTCACAAAGTCTACTACGCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGATTCAGGGCTTCCTAAGCTGCAATTCAGCAGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS CCA 90 bp AGCAAGGGAGCCCTGCTGAATTGCAGCTTAGGAAGCCCTGAATCCTaGAGGTGCGTTGAAACCGAGAACGCGCGGCGTAGTAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: SKGALLNCSLGSPES*RCVETENARRSRLC
Trigger: ACAAAGTCTACTACGCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGATTCAGGGCTTCCTAAGCTGCAATTCAGCAGGGCTCCCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTAGGCGCGCGGGGTCGTaGCCGGGGGCACAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIRRAGS*PGAQSE
Trigger: CTCACTCTGTGCCCCCGGCAACGACCCCGCGCGCCT...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356448.8
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAAACACCGAGTTAGTCTaGCCTTCTGGGGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQNTELV*PSGACN
Trigger: ATTGCAAGCCCCAGAAGGCAAGACTAACTCGGTGTT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGGCTCATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCAAAGGGGTTATGCTGTaGCTAGAAAAATCCACCTCG +
Preference number: 5 (lower is better)
Translates to: WLIAEVTGCRLCEPGTLTKGVML*LEKSTS
Trigger: CGAGGTGGATTTTTCTAGCAACAGCATAACCCCTTT...GGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAATGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKTALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCTALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGCAGACATCTGTAATATaGGAGAAAAGATGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRQTSVI*EKRWCL
Trigger: GAGGCACCATCTTTTCTCCAATATTACAGATGTCTG...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCTTGCCTTCTGGGGCTaGCAATGTCCGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSLAFWG*QCPGPR
Trigger: CCTCGGCCCCGGACATTGCAAGCCCCAGAAGGCAAG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAAAAGGGGTTATGCTGTaGCTAGAAAAATCCACCTCG +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQKGVML*LEKSTS
Trigger: CGAGGTGGATTTTTCTAGCAACAGCATAACCCCTTT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTAACACAGTTGGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: TPTHLSLWTIAITSLTQLDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...CAACTGTGTTAATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAIDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKARSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTCTTGAATAGAGCATaGTGGAGCTGTTCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEVLNRA*WSCSSL
Trigger: CAGGGAAGAACAGCTCCACAATGCTCTATTCAAGAC...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp CAGCCTCTTTCTCCATCTCGTAGTCGTTCCCCCTCATACCAGCCATCGCTGACATGGCAGAGCTCTGTCTaGAATAGAGCATTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QPLSPSRSRSPSYQPSLTWQSSV*NRALWS
Trigger: GCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCA...TGTCAGCGATGGCTGGTATGAGGGGGAACGACTACGAGATGGAGAAAGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496710.5
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATGGCAGAGCTCTGTCTaGAATAGAGCATTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRWQSSV*NRALWS
Trigger: GCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAAATCCTGGAGGTGCGTaGAAACCGAGAACGCGCGGC +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKANPGGA*KPRTRG
Trigger: GCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGATT...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp TGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTCATTGACTGGGGCCTCGGCTaGCTCCGGCCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: CFANPNTSFTVDHCYYFIDWGLG*LRPRTW
Trigger: CCAGGTTCTGGGCCGGAGCAAGCCGAGGCCCCAGTC...AATGAAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGGTCTATAAAGAACTTTTaGCTTGCCTCACAGACATCT +
Preference number: 5 (lower is better)
Translates to: PALGEAEDLLSGGSLEGRSIKNF*LASQTS
Trigger: AGATGTCTGTGAGGCAAGCAAAAAGTTCTTTATAGA...CCTGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGTCCTTAGGTGTTTTTaGACAGATAGTATCCATCAG +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAVLRCF*TDSIHQ
Trigger: CTGATGGATACTATCTGTCAAAAAACACCTAAGGAC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGTCTTGAATAGAGCATaGTGGAGCTGTTCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRVLNRA*WSCSSL
Trigger: CAGGGAAGAACAGCTCCACAATGCTCTATTCAAGAC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCACTTATCAATTGTAGCTaGACATGTTATCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRALINCS*TCYLLG
Trigger: GCCAAGGAGATAACATGTCAAGCTACAATTGATAAG...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGACGGAATGCTTGTTTaGCAAACCCCAACACATCTT +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEDGMLV*QTPTHL
Trigger: AAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGTC...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTCTTGCCTTCTGGGGCTaGCAATGTCCGGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAILAFWG*QCPGPR
Trigger: CCTCGGCCCCGGACATTGCAAGCCCCAGAAGGCAAG...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: HVTYRFESSNNVHFARFYPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGTTGGTAGACTTCATTaGTGCAGTATTTCACATATG +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAVGRLH*CSISHM
Trigger: CATATGTGAAATACTGCACAAATGAAGTCTACCAAC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGACATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTTCCGGGCGCCCTCATaGCATAGTCGAACCAACTTG +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGFRAPS*HSRTNL
Trigger: CAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGAA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TCCCAGCACTTGGGGAGGCCGAGGATCTCCTCTCTGGTGGATCACTTGAGGGCAGAATTAAGCTCTTCATaGTCACAAGATTCCACCAAT +
Preference number: 5 (lower is better)
Translates to: SQHLGRPRISSLVDHLRAELSSS*SQDSTN
Trigger: ATTGGTGGAATCTTGTGACAATGAAGAGCTTAATTC...TGCCCTCAAGTGATCCACCAGAGAGGAGATCCTCGGCCTCCCCAAGTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGACAGGGTGCAGTACAGATATACAATCTaGCTAATACTGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: VRSPQCPTLAHCRGDRVQYRYTI*LILGEP
Trigger: TGGTTCTCCCAGTATTAGCAAGATTGTATATCTGTA...CTGCACCCTGTCACCTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCCCTAGGAAGCAGAGGTaGCAGTGGGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGPRKQR*QWAKIT
Trigger: TGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAGG...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGATGCCGTCCCACCATaGGCCACCGCTCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNDAVPP*ATALRW
Trigger: CCAGCGGAGAGCGGTGGCCAATGGTGGGACGGCATC...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACACATCGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: CDIIKEVTECLFCKPQHIGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...GATGTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTACTTACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: CLFCKPQHIFHCGPLLLLTALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...AAGTAATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATCCCTTTGCCGCCAGGCACCGCTTaGGGGAGCTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: HTDLSPPIMYTLPGFIPLPPGTA*GSLGDL
Trigger: CAAGTCACCCAAGCTCCCCAAAGCGGTGCCTGGCGG...CAAAGGGATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAACCCGTTCGGGGTCCTTaGCCTTCCGGCCGGACTGCG +
Preference number: 5 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKPVRGP*PSGRTA
Trigger: CGCAGTCCGGCCGGAAGGCAAAGGACCCCGAACGGG...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TTAGCGGACAGTAGTTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: LADSSWDMSHTDLSPPIMGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...CATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAACTACTGTCCGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGGTGGGGCTCCACATTTaGATTGTTGGATTTACTTAT +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAEVGLHI*IVGFTY
Trigger: ATAAGTAAATCCAACAATCAAAATGTGGAGCCCCAC...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATTCCGGGCGCCCTCATaGCATAGTCGAACCAACTTG +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAFRAPS*HSRTNL
Trigger: CAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGAA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTTCCGGGCGCCCTCATaGCATAGTCGAACCAACTTG +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSFRAPS*HSRTNL
Trigger: CAAGTTGGTTCGACTATGCAATGAGGGCGCCCGGAA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGCCATCGCTGACACGTaGATAGATGAGGACGACGTC +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAAIADT*IDEDDV
Trigger: GACGTCGTCCTCATCTATCAACGTGTCAGCGATGGC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCCCCACACTGGCTCATTGCCGAGCTTATCAATTGTAGCTaGACATGTTATCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RAIQGLEVPSAPHWLIAELINCS*TCYLLG
Trigger: GCCAAGGAGATAACATGTCAAGCTACAATTGATAAG...CTCGGCAATGAGCCAGTGTGGGGCACTGGGGACTTCTAACCCTTGGATTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKLRDYT*VSSPSK
Trigger: CTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCCTAGGAAGCAGAGGTaGCAGTGGGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSPRKQR*QWAKIT
Trigger: TGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAGG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAACCAGGTTTTATCCCTTaGTTAAAGCAAATAGAACAG +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQPGFIP*LKQIEQ
Trigger: CTGTTCTATTTGCTTTAACAAAGGGATAAAACCTGG...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ATTGCCGAGGTGACAGGGTGCAGGCTGTGTGAGCCAGGCACACTTACCCCTCAAATGTCACATACAGATTaGAGTCCTCCAATAATGTAC +
Preference number: 5 (lower is better)
Translates to: IAEVTGCRLCEPGTLTPQMSHTD*SPPIMY
Trigger: GTACATTATTGGAGGACTCAAATCTGTATGTGACAT...TTGAGGGGTAAGTGTGCCTGGCTCACACAGCCTGCACCCTGTCACCTCGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGTGGGGCTCCACATTTaGATTGTTGGATTTACTTAT +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRVGLHI*IVGFTY
Trigger: ATAAGTAAATCCAACAATCAAAATGTGGAGCCCCAC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATATTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIFHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAA...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGFHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGTCTTGAATAGAGCATaGTGGAGCTGTTCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCVLNRA*WSCSSL
Trigger: CAGGGAAGAACAGCTCCACAATGCTCTATTCAAGAC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATACCGCTTTGGGGAGCTaGGGTGACTTGGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNTALGS*GDLGRR
Trigger: TCGACGGCCCAAGTCACCCAAGCTCCCCAAAGCGGT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATAGGTCACCGCGCCATTaGCTGGGGATTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNRSPRH*LGISGS
Trigger: GCTCCCCGAAATCCCCAGCAAATGGCGCGGTGACCT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIETMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAAACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCATTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAFHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAA...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTTCCTTCAAGGCTCTTTaGCAGACTTCATACTTCGGA +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCSFKAL*QTSYFG
Trigger: TCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGGA...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGAGAATTAAGCTCTTCATaGTCACAAGATTCCACCAAT +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRELSSS*SQDSTN
Trigger: ATTGGTGGAATCTTGTGACAATGAAGAGCTTAATTC...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CAGAGGTTGCAGTGGGCCAAGATCACACCACTATACTCTAGCCTGGGCGACAGATACAGATATACAATCTaGCTAATACTGGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: QRLQWAKITPLYSSLGDRYRYTI*LILGEP
Trigger: TGGTTCTCCCAGTATTAGCAAGATTGTATATCTGTA...TCTGTCGCCCAGGCTAGAGTATAGTGGTGTGATCTTGGCCCACTGCAACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAGGCAGGAGAATCACTaGAACCTAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSRQENH*NLGSRG
Trigger: ACCTCTGCTTCCTAGGTTCAAGTGATTCTCCTGCCT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCAACACCGAGTTAGTCTaGCCTTCTGGGGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSNTELV*PSGACN
Trigger: ATTGCAAGCCCCAGAAGGCAAGACTAACTCGGTGTT...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTACTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLLHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAG...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATAATCCTGGAGGTGCGTaGAAACCGAGAACGCGCGGC +
Preference number: 5 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNNPGGA*KPRTRG
Trigger: GCCGCGCGTTCTCGGTTTCAACGCACCTCCAGGATT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000618535.3
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGAAAGGGGTTATGCTGTaGCTAGAAAAATCCACCTCG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKKGVML*LEKSTS
Trigger: CGAGGTGGATTTTTCTAGCAACAGCATAACCCCTTT...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGGGAGCTTGGGTGACTaGGGCCGTCGAAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKGSLGD*GRRSRG
Trigger: TCCTCGACTTCGACGGCCCAAGTCACCCAAGCTCCC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTTTTATGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: HVTYRFESSNNVHFARFYGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...ATAAAACCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp AATACTGGGAGAACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: NTGRTIQGCIKRDSHLSNTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...ATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGTTCTCCCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLFHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCAGACATCTGTAATATaGGAGAAAAGATGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCQTSVI*EKRWCL
Trigger: GAGGCACCATCTTTTCTCCAATATTACAGATGTCTG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AGAAGGTATGCACAGGTCAAAAAGAGCAATCCAAGGGTTAGAAGTCCCCAGTGCTCCTTCAAGGCTCTTTaGCAGACTTCATACTTCGGA +
Preference number: 5 (lower is better)
Translates to: RRYAQVKKSNPRVRSPQCSFKAL*QTSYFG
Trigger: TCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGGA...GCACTGGGGACTTCTAACCCTTGGATTGCTCTTTTTGACCTGTGCATACCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp CTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCTCCTTCAAGGCTCTTTaGCAGACTTCATACTTCGGA +
Preference number: 5 (lower is better)
Translates to: LYPSSSHERAEQPGKLKGSFKAL*QTSYFG
Trigger: TCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGGA...GCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GAGCCAGGCACACTTACCCCTCAACTGGGCTTCTGTAGCTTTACAATTTGGATACATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: EPGTLTPQLGFCSFTIWIHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...TATCCAAATTGTAAAGCTACAGAAGCCCAGTTGAGGGGTAAGTGTGCCTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCAGTCTTGAATAGAGCATaGTGGAGCTGTTCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAVLNRA*WSCSSL
Trigger: CAGGGAAGAACAGCTCCACAATGCTCTATTCAAGAC...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATGGCAGAGCTCTGTCTaGAATAGAGCATTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLWQSSV*NRALWS
Trigger: GCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCA...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGCTGAGAGACTACACGTaGGTCTCCAGTCCTAGCAAG +
Preference number: 5 (lower is better)
Translates to: LGHVTYRFESSNNVHFARLRDYT*VSSPSK
Trigger: CTTGCTAGGACTGGAGACCAACGTGTAGTCTCTCAG...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTGTCAAAAGGTTTCAATaGGGTACCATGCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCVKRFQ*GTMLTS
Trigger: AGAAGTCAGCATGGTACCCAATTGAAACCTTTTGAC...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp ACGGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTAGAGGTGACGGAATGCTaGTTTTGCAAACCCCAACAC +
Preference number: 5 (lower is better)
Translates to: TECLFCKPQHIFHCGPLLEVTEC*FCKPQH
Trigger: GTGTTGGGGTTTGCAAAACAAGCATTCCGTCACCTC...TAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp GGAATGCTTGTTTTGCAAACCCCAACACATCTTTCACTGTGGACCATTGCTATTCTTCACCGCAGAGAGTaGGCTCCATGTGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: GMLVLQTPTHLSLWTIAILHRRE*APCGSQ
Trigger: TTGAGATCCACATGGAGCCAACTCTCTGCGGTGAAG...AATAGCAATGGTCCACAGTGAAAGATGTGTTGGGGTTTGCAAAACAAGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465817.1
ENST00000629129.2
CDS-3UTR CAA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAGGGCGGCGGGGCTGTTaGTACTCAAAACCACGGAAG +
Preference number: 5 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKGRRGC*YSKPRK
Trigger: CTTCCGTGGTTTTGAGTACAAACAGCCCCGCCGCCC...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp ATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGAAAACCATGCTGCGCACCTaGAGGAGTCTCTTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: IQGCIKRDSHLSNARIEKTMLRT*RSLLWG
Trigger: GCCCCACAAGAGACTCCTCAAGGTGCGCAGCATGGT...TTTCTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCTCCTTCAAGGCTCTTTaGCAGACTTCATACTTCGGA +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSSFKAL*QTSYFG
Trigger: TCCGAAGTATGAAGTCTGCAAAAGAGCCTTGAAGGA...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGCTTAAAGGCACATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: CIQALLMREQNNLASLKAHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...TGCCTTTAAGCTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp CCTGGGAAGAGGTTTAGAAAAACAACAGCTCACCTTCTGAACTCTACCAGTTCCCATAGTCGAACCAACTaGCTAACTTCCTTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PGKRFRKTTAHLLNSTSSHSRTN*LTSFKA
Trigger: AGCCTTGAAGGAAGTTAGCAAGTTGGTTCGACTATG...GGAACTGGTAGAGTTCAGAAGGTGAGCTGTTGTTTTTCTAAACCTCTTCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp GCAAACTCACTGTATCCAAGCTCTTCTCATGAGAGAGCAGAACAACCTGGCAAGTCTTCACTCTTCTTCTaGGTGATAATGAGCACATCG +
Preference number: 5 (lower is better)
Translates to: ANSLYPSSSHERAEQPGKSSLFF*VIMSTS
Trigger: CGATGTGCTCATTATCACCAAGAAGAAGAGTGAAGA...CTTGCCAGGTTGTTCTGCTCTCTCATGAGAAGAGCTTGGATACAGTGAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp TTGGGACATGTCACATACAGATTTGAGTCCTCCAATAATGTACACTTTGCCAGGTGGCAGAGCTCTGTCTaGAATAGAGCATTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LGHVTYRFESSNNVHFARWQSSV*NRALWS
Trigger: GCTCCACAATGCTCTATTCAAGACAGAGCTCTGCCA...CCTGGCAAAGTGTACATTATTGGAGGACTCAAATCTGTATGTGACATGTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp AGGAGGAGCAGAGATGACCTGATCCCTGAAGTGAACTGCTCAGCTATTCTGTGTCTTATCAATTGTAGCTaGACATGTTATCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RRSRDDLIPEVNCSAILCLINCS*TCYLLG
Trigger: GCCAAGGAGATAACATGTCAAGCTACAATTGATAAG...ACACAGAATAGCTGAGCAGTTCACTTCAGGGATCAGGTCATCTCTGCTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3
ENST00000630729.2
CDS-3UTR CAA 90 bp AAAGTCTGTGACATTATTAAAGAGGTGACGGAATGCTTGTTTTGCAAACCCCAACCTAGGAAGCAGAGGTaGCAGTGGGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: KVCDIIKEVTECLFCKPQPRKQR*QWAKIT
Trigger: TGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAGG...TTGGGGTTTGCAAAACAAGCATTCCGTCACCTCTTTAATAATGTCACAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356448.8
ENST00000465093.6
CDS-3UTR CAA 90 bp ACCATACAAGGATGTATAAAGAGAGACAGTCACCTTAGTAATGCAAGGATAGAGCCTAGGAAGCAGAGGTaGCAGTGGGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: TIQGCIKRDSHLSNARIEPRKQR*QWAKIT
Trigger: TGTGATCTTGGCCCACTGCAACCTCTGCTTCCTAGG...CTCTATCCTTGCATTACTAAGGTGACTGTCTCTCTTTATACATCCTTGTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356448.8
ENST00000465093.6
ENST00000496710.5
ENST00000614308.3
ENST00000618535.3