RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF25 (Homo sapiens)

Ensembl gene IDs: ENSG00000240771

Ensembl transcript IDs: ENST00000286494.9, ENST00000333972.11, ENST00000466399.1, ENST00000469072.5, ENST00000471370.5, ENST00000484357.1, ENST00000616622.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGGGGAATAGGCGGCTaGGTCAGCACCACCCCCATG +
Preference number: 2 (lower is better)
Translates to: PALPTLQTHQEGGILEQCWGIGG*VSTTPM
Trigger: CATGGGGGTGGTGCTGACTCAGCCGCCTATTCCCCA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
3UTR-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGGGGAATAGGCGGCTaGGTCAGCACCACCCCCATG +
Preference number: 2 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAWGIGG*VSTTPM
Trigger: CATGGGGGTGGTGCTGACTCAGCCGCCTATTCCCCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGCCACTGACGGGCCCTaGGGGGCCTTGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCATDGP*GALPQL
Trigger: GAGCTGGGGCAAGGCCCCCCAGGGCCCGTCAGTGGC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCAGTATCCGGTCAGTaGGGCCAGGGGCGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPVSGQ*GQGRGG
Trigger: ACCGCCCCGCCCCTGGCCGCACTGACCGGATACTGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCGACCCCCGAGCCACTaGCGCTGTGCGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARPPSH*RCAGPS
Trigger: GCTGGGACCCGCACAGCGCCAGTGGCTCGGGGGTCG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGATGGTAGGGGAGGCTaGGCCGGGATGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCDGRGG*AGMRQP
Trigger: CGGCTGCCGCATCCCGGCCCAGCCTCCCCTACCATC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGAGCCACTGGCGCTGTaGGGGTCCCAGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAEPLAL*GSQRSG
Trigger: TCCGCTCCGCTGGGACCCGCACAGCGCCAGTGGCTC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACGAGGCTGGGCCGGGATaGGGCAGCCGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDEAGPG*GSRSSC
Trigger: ACAGCTGGAGCGGCTGCCGCATCCCGGCCCAGCCTC...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCTCTCGGGGACCCCCTaGGCAGCCATGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCLSGTP*AAMVAI
Trigger: TATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCAGGCGGTGCCCCAGCTaGTGCCGGAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCRRCPS*CRSSSK
Trigger: CTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCGCCT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCAGGAGGTCGTTCAGCTaGAGGCGGTGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCRRSFS*RRCPSC
Trigger: GCAGCTGGGGCACCGCCTGCAGCTGAACGACCTCCT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCTCTCGGGGACCCCCTaGGCAGCCATGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLSGTP*AAMVAI
Trigger: TATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGCCTCAGGCTCGGTaGCCCAGAAAGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCQPQAR*PRKCPG
Trigger: GCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCACCTCCCCTTTGGGTaGCAGCAGCAGAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCHLPFG*QQQRGE
Trigger: CTCCCCTCTCTGCTGCTGTCACCCAAAGGGGAGGTG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCGGGGGCTTCATACTaGACCCCCACCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPGASY*TPTLLQ
Trigger: TTGGAGCAGGGTGGGGGTTCAGTATGAAGCCCCCGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCAGGCGGTGCCCCAGCTaGTGCCGGAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARRCPS*CRSSSK
Trigger: CTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCGCCT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGAGGCGGTGCCCCAGCTaGTGCCGGAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRRRCPS*CRSSSK
Trigger: CTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCGCCT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGAGGAGGTCGTTCAGCTaGAGGCGGTGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRRRSFS*RRCPSC
Trigger: GCAGCTGGGGCACCGCCTGCAGCTGAACGACCTCCT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCAGGAGGTCGTTCAGCTaGAGGCGGTGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARRSFS*RRCPSC
Trigger: GCAGCTGGGGCACCGCCTGCAGCTGAACGACCTCCT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCGGCAAGGGTCACCTTaGAGGTTCCCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCRQGSP*RFPSSP
Trigger: GGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCACCCTCTGGCCCTCTaGAGGTCAGTGCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCHPLAL*RSVQSG
Trigger: GCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCTGGATCCCACCCTCTaGCCCTCTGGAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCLDPTL*PSGGQC
Trigger: GCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCACTCCAGGCCCTCTTaGCCGCCCCAGGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAHSRPS*PPQAVG
Trigger: ACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTGGCAAGAGGGCTCTaGCCACCTCCCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVARGL*PPPLWV
Trigger: CACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGAGTCATGGGGAGCCTaGGGGATGTCACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCESWGA*GMSPRA
Trigger: GGCCCTTGGTGACATCCCCCAGGCTCCCCATGACTC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCAGCCTCAGGCTCGGTaGCCCAGAAAGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRQPQAR*PRKCPG
Trigger: GCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCAGCCTCAGGCTCGGTaGCCCAGAAAGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDQPQAR*PRKCPG
Trigger: GCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCACCTCCCCTTTGGGTaGCAGCAGCAGAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDHLPFG*QQQRGE
Trigger: CTCCCCTCTCTGCTGCTGTCACCCAAAGGGGAGGTG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGGGGAATAGGCGGCTaGGTCAGCACCACCCCCATG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDWGIGG*VSTTPM
Trigger: CATGGGGGTGGTGCTGACTCAGCCGCCTATTCCCCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCCTCTGGAGGTCAGTaGAAAGCGGCAAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPSGGQ*KAARVT
Trigger: GGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGCTGTCTCCGGCCTCTaGTTAGGGGTGGCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAAVSGL*LGVALG
Trigger: GCCTAGAGCCACCCCTAACCAGAGGCCGGAGACAGC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCGGCAAGGGTCACCTTaGAGGTTCCCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARQGSP*RFPSSP
Trigger: GGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCACCCTCTGGCCCTCTaGAGGTCAGTGCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAHPLAL*RSVQSG
Trigger: GCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCACCCTCTGGCCCTCTaGAGGTCAGTGCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDHPLAL*RSVQSG
Trigger: GCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCTGGATCCCACCCTCTaGCCCTCTGGAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTALDPTL*PSGGQC
Trigger: GCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCTGGATCCCACCCTCTaGCCCTCTGGAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLDPTL*PSGGQC
Trigger: GCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGTGGCAAGAGGGCTCTaGCCACCTCCCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRVARGL*PPPLWV
Trigger: CACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCAC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGTGGCAAGAGGGCTCTaGCCACCTCCCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAVARGL*PPPLWV
Trigger: CACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCAC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCCAAGAGCTTCCCCTaGGCAGTCAGTTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPKSFP*AVSLPS
Trigger: TGAGGGCAAACTGACTGCTCAGGGGAAGCTCTTGGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCCTCTGGAGGTCAGTaGAAAGCGGCAAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPSGGQ*KAARVT
Trigger: GGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCCTCTGGAGGTCAGTaGAAAGCGGCAAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPSGGQ*KAARVT
Trigger: GGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGGGTGTGTGTGTGCTaGCCTGGGCCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCWVCVC*PGPDLQ
Trigger: TTGGAGATCAGGCCCAGGGCAGCACACACACACCCA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTATCCCTCCCAGCCTTaGCCACCCTCCAGACACACC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDYPSQP*PPSRHT
Trigger: GGTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTATCCCTCCCAGCCTTaGCCACCCTCCAGACACACC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAYPSQP*PPSRHT
Trigger: GGTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGCCCTCCAACAGTGTaGTCAGCAAGGTCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGPPTV*SARSVP
Trigger: CGGAACTGACCTTGCTGACCACACTGTTGGAGGGCC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCCCCTGAGCAGCCATaGTGGCCATATAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPPEQP*WPYNPP
Trigger: TGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGGCCACCTCCCCTTTaGGTGACAGCAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDWPPPL*VTAAER
Trigger: CCTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGGCCACCTCCCCTTTaGGTGACAGCAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAWPPPL*VTAAER
Trigger: CCTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTGGCCACCTCCCCTTTaGGTGACAGCAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRWPPPL*VTAAER
Trigger: CCTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGCCTGTTTATCCAGTaGCAAGAGGGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGLFIQ*QEGSGH
Trigger: GTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCACTGGAGGAGAGTCATaGGGAGCCTGGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCTGGES*GAWGMS
Trigger: TGACATCCCCCAGGCTCCCCATGACTCTCCTCCAGT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCAGCTTGGCAAGTCTaGCTTGGCAGGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPAWQV*LGREGF
Trigger: AAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCCAAGAGCTTCCCCTaGGCAGTCAGTTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPKSFP*AVSLPS
Trigger: TGAGGGCAAACTGACTGCTCAGGGGAAGCTCTTGGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCCAAGAGCTTCCCCTaGGCAGTCAGTTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPKSFP*AVSLPS
Trigger: TGAGGGCAAACTGACTGCTCAGGGGAAGCTCTTGGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGCTTGATCCAGGCCTaGCTGATAGCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCCLIQA*LIAGSA
Trigger: TGCAGACCCTGCTATCAGTCAGGCCTGGATCAAGCA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTGACTGCAATGCGTTaGGGAAGTCCCGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVTAMR*GSPVGS
Trigger: AGAGCCAACGGGACTTCCTCAACGCATTGCAGTCAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGAGGGGAGAGAGCCATTaGTGGGTGTGTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRRGESH*WVCVCC
Trigger: GCAGCACACACACACCCATCAATGGCTCTCTCCCCT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCAGGGGAGAGAGCCATTaGTGGGTGTGTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARGESH*WVCVCC
Trigger: GCAGCACACACACACCCATCAATGGCTCTCTCCCCT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCACTGATAGCAGGGTCTaGAGCCTGCAGGACATAGCG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCTDSRV*SLQDIA
Trigger: CGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGGGTGTGTGTGTGCTaGCCTGGGCCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAWVCVC*PGPDLQ
Trigger: TTGGAGATCAGGCCCAGGGCAGCACACACACACCCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTGGGTGTGTGTGTGCTaGCCTGGGCCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRWVCVC*PGPDLQ
Trigger: TTGGAGATCAGGCCCAGGGCAGCACACACACACCCA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCAGTGCCAGAAGGACTaGCCTGAAGCTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDQCQKD*PEAPWG
Trigger: TCCCCAAGGAGCTTCAGGGCAGTCCTTCTGGCACTG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCAGTGCCAGAAGGACTaGCCTGAAGCTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAQCQKD*PEAPWG
Trigger: TCCCCAAGGAGCTTCAGGGCAGTCCTTCTGGCACTG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACGGCCCTCCAACAGTGTaGTCAGCAAGGTCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDGPPTV*SARSVP
Trigger: CGGAACTGACCTTGCTGACCACACTGTTGGAGGGCC...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGGCCCTCCAACAGTGTaGTCAGCAAGGTCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRGPPTV*SARSVP
Trigger: CGGAACTGACCTTGCTGACCACACTGTTGGAGGGCC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCCCCTGAGCAGCCATaGTGGCCATATAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPPEQP*WPYNPP
Trigger: TGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGGCCTGTTTATCCAGTaGCAAGAGGGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRGLFIQ*QEGSGH
Trigger: GTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGGAGGAGAGTCATaGGGAGCCTGGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRTGGES*GAWGMS
Trigger: TGACATCCCCCAGGCTCCCCATGACTCTCCTCCAGT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCACTGGAGGAGAGTCATaGGGAGCCTGGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTATGGES*GAWGMS
Trigger: TGACATCCCCCAGGCTCCCCATGACTCTCCTCCAGT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCAGCTTGGCAAGTCTaGCTTGGCAGGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPAWQV*LGREGF
Trigger: AAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCAGCTTGGCAAGTCTaGCTTGGCAGGGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPAWQV*LGREGF
Trigger: AAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCAATAATTTCTATCTaGCCCCTGCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPIISI*PLPQPS
Trigger: GGAGGGCTGGGGCAGGGGCCAGATAGAAATTATTGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCGTACGTTCAGACTCTaGCTCGGTACCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTARTFRL*LGTHQP
Trigger: GGGTTGGTGGGTACCGAGCCAGAGTCTGAACGTACG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCTCACTGCCCGCAATaGAATAGGATTCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPHCPQ*NRIRAA
Trigger: TGCAGCCCGAATCCTATTCCATTGCGGGCAGTGAGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTCATATGGTCCTGCCTaGCCACTGTCTGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCSYGPA*PLSASV
Trigger: AACTGAGGCAGACAGTGGTCAGGCAGGACCATATGA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCTTGATCCAGGCCTaGCTGATAGCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDCLIQA*LIAGSA
Trigger: TGCAGACCCTGCTATCAGTCAGGCCTGGATCAAGCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGCTTGATCCAGGCCTaGCTGATAGCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTACLIQA*LIAGSA
Trigger: TGCAGACCCTGCTATCAGTCAGGCCTGGATCAAGCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGGCTCTCCAAGATCTaGGCCACATGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCWLSKI*ATCLIQ
Trigger: CTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGTGACTGCAATGCGTTaGGGAAGTCCCGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRVTAMR*GSPVGS
Trigger: AGAGCCAACGGGACTTCCTCAACGCATTGCAGTCAC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGTGACTGCAATGCGTTaGGGAAGTCCCGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAVTAMR*GSPVGS
Trigger: AGAGCCAACGGGACTTCCTCAACGCATTGCAGTCAC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTCGCGATCCCTTCTGTaGTCTCCCTCCGTACGTTCA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRSRSLL*SPSVRS
Trigger: TGAACGTACGGAGGGAGATCACAGAAGGGATCGCGA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGCCTGACCACTGTCTaGCTCAGTTTCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCCLTTV*LSFHTE
Trigger: CTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTTCTCATATGGTCCTaGCTGACCACTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVLIWS*LTTVCL
Trigger: GAGGCAGACAGTGGTCAGGCAGGACCATATGAGAAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGATAGCAGGGTCTaGAGCCTGCAGGACATAGCG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRTDSRV*SLQDIA
Trigger: CGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACACTGATAGCAGGGTCTaGAGCCTGCAGGACATAGCG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDTDSRV*SLQDIA
Trigger: CGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGAATTCTGGAGCAGTaGCAGAAGGACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGILEQ*QKDCPE
Trigger: TTCAGGGCAGTCCTTCTGGCACTGCTCCAGAATTCC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGGGACCATGATGCATaGATAGGGATGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGDHDA*IGMGAE
Trigger: TTCAGCTCCCATCCCTATGCATGCATCATGGTCCCC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCACTGAACCCCCACCCTaGTCCAAGTTTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTATEPPP*SKFQGR
Trigger: TCGACCCTGAAACTTGGAGCAGGGTGGGGGTTCAGT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCTCACTGCCCGCAATaGAATAGGATTCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPHCPQ*NRIHVP
Trigger: GGGGACGTGAATCCTATTCCATTGCGGGCAGTGAGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGGCTCTCCCGTCTCTaGTACTCAATGGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDWLSRL*YSMGDC
Trigger: GCAGTCACCCATTGAGTACCAGAGACGGGAGAGCCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGGCTCTCCCGTCTCTaGTACTCAATGGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAWLSRL*YSMGDC
Trigger: GCAGTCACCCATTGAGTACCAGAGACGGGAGAGCCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTTGGCAAGTCTGGCTTaGCAGGGAGGGGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCLASLA*QGGVFG
Trigger: TCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCAATAATTTCTATCTaGCCCCTGCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPIISI*PLPQPS
Trigger: GGAGGGCTGGGGCAGGGGCCAGATAGAAATTATTGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCAATAATTTCTATCTaGCCCCTGCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPIISI*PLPQPS
Trigger: GGAGGGCTGGGGCAGGGGCCAGATAGAAATTATTGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGGCTCTCCAAGATCTaGGCCACATGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDWLSKI*ATCLIQ
Trigger: CTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGGCTCTCCAAGATCTaGGCCACATGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAWLSKI*ATCLIQ
Trigger: CTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCATAGGGATGGGAGCTaGAGGAAACTGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCHRDGS*RKLCSL
Trigger: CAAGGAACACAGTTTCCTTCAGCTCCCATCCCTATG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTGACCACTGTCTaGCTCAGTTTCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDCLTTV*LSFHTE
Trigger: CTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGTTCTCATATGGTCCTaGCTGACCACTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRVLIWS*LTTVCL
Trigger: GAGGCAGACAGTGGTCAGGCAGGACCATATGAGAAC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGTTCTCATATGGTCCTaGCTGACCACTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAVLIWS*LTTVCL
Trigger: GAGGCAGACAGTGGTCAGGCAGGACCATATGAGAAC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGCGTCATCATATCGTTaGAGCGCTTGGGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRASSYR*SAWAQS
Trigger: GCTTTGTGCCCAAGCGCTGCAACGATATGATGACGC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACGCGTCATCATATCGTTaGAGCGCTTGGGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDASSYR*SAWAQS
Trigger: GCTTTGTGCCCAAGCGCTGCAACGATATGATGACGC...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCTGAGCAGTCAGTTTaGCCTCAAATCCCCGCAATC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPEQSV*PQIPAI
Trigger: GATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCTGAGCAGTCAGTTTaGCCTCAAATCCCCGCAATC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPEQSV*PQIPAI
Trigger: GATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGGAATTCTGGAGCAGTaGCAGAAGGACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAGILEQ*QKDCPE
Trigger: TTCAGGGCAGTCCTTCTGGCACTGCTCCAGAATTCC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGGGGACCATGATGCATaGATAGGGATGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAGDHDA*IGMGAE
Trigger: TTCAGCTCCCATCCCTATGCATGCATCATGGTCCCC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGGGGACCATGATGCATaGATAGGGATGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRGDHDA*IGMGAE
Trigger: TTCAGCTCCCATCCCTATGCATGCATCATGGTCCCC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTCACTCTCAGGGGCTTaGGACAAAGTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCSLSGA*DKVSSS
Trigger: TGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCTGAGCAGCCATGGTaGCCATATAACCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPEQPW*PYNPPQ
Trigger: TTGTGGAGGGTTATATGGCCACCATGGCTGCTCAGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCTGAGCAGCCATGGTaGCCATATAACCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPEQPW*PYNPPQ
Trigger: TTGTGGAGGGTTATATGGCCACCATGGCTGCTCAGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCTGAGCAGCCATGGTaGCCATATAACCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPEQPW*PYNPPQ
Trigger: TTGTGGAGGGTTATATGGCCACCATGGCTGCTCAGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTTGGCAAGTCTGGCTTaGCAGGGAGGGGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLASLA*QGGVFG
Trigger: TCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTTGGCAAGTCTGGCTTaGCAGGGAGGGGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDLASLA*QGGVFG
Trigger: TCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCATCTTCATCCAGCTTaGCAAGTCTGGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDHLHPA*QVWLGR
Trigger: CCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCATCTTCATCCAGCTTaGCAAGTCTGGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRHLHPA*QVWLGR
Trigger: CCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCATCTTCATCCAGCTTaGCAAGTCTGGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAHLHPA*QVWLGR
Trigger: CCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTCAGCACCACCCCCATaGTTTTCACCAGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCSAPPP*FSPVTA
Trigger: AGCTGTAACTGGTGAAAACCATGGGGGTGGTGCTGA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCTGGTACTCAATGGGTaGCTGCAATGCGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTALVLNG*LQCVEE
Trigger: TTCCTCAACGCATTGCAGTCACCCATTGAGTACCAG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCTGGTACTCAATGGGTaGCTGCAATGCGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDLVLNG*LQCVEE
Trigger: TTCCTCAACGCATTGCAGTCACCCATTGAGTACCAG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCTGGTACTCAATGGGTaGCTGCAATGCGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLVLNG*LQCVEE
Trigger: TTCCTCAACGCATTGCAGTCACCCATTGAGTACCAG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCATAGGGATGGGAGCTaGAGGAAACTGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRHRDGS*RKLCSL
Trigger: CAAGGAACACAGTTTCCTTCAGCTCCCATCCCTATG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCATAGGGATGGGAGCTaGAGGAAACTGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDHRDGS*RKLCSL
Trigger: CAAGGAACACAGTTTCCTTCAGCTCCCATCCCTATG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTACACCACATACATATaGAGCCGGCGCTCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDYTTYI*SRRSCL
Trigger: CAAACACGAGCGCCGGCTGCATATGTATGTGGTGTA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTACACCACATACATATaGAGCCGGCGCTCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRYTTYI*SRRSCL
Trigger: CAAACACGAGCGCCGGCTGCATATGTATGTGGTGTA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCATCCAGTTCTCATATaGTCCTGCCTGACCACTGTC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRHPVLI*SCLTTV
Trigger: GACAGTGGTCAGGCAGGACCATATGAGAACTGGATG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTCACTCTCAGGGGCTTaGGACAAAGTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRSLSGA*DKVSSS
Trigger: TGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTCACTCTCAGGGGCTTaGGACAAAGTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTASLSGA*DKVSSS
Trigger: TGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTCAGCACCACCCCCATaGTTTTCACCAGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDSAPPP*FSPVTA
Trigger: AGCTGTAACTGGTGAAAACCATGGGGGTGGTGCTGA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCACATATCCTCCTTTTaGGGGGACCATGATGCATGC +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDHISSF*GDHDAC
Trigger: GCATGCATCATGGTCCCCCCAAAAGGAGGATATGTG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCACATATCCTCCTTTTaGGGGGACCATGATGCATGC +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRHISSF*GDHDAC
Trigger: GCATGCATCATGGTCCCCCCAAAAGGAGGATATGTG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCACATATCCTCCTTTTaGGGGGACCATGATGCATGC +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAHISSF*GDHDAC
Trigger: GCATGCATCATGGTCCCCCCAAAAGGAGGATATGTG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCAGACAATGTTTGGAATaGTCCAACCATCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCRQCLE*SNHLLR
Trigger: CCTGAGGAGATGGTTGGATCATTCCAAACATTGTCT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTGTTTGATGAATAGCTaGGCCAGCCAATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCCLMNS*ASQSGS
Trigger: AGATCCTGATTGGCTGGCTCAGCTATTCATCAAACA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCATATACTCCCCTCACTaGCCGCAATGGAATAGGATT +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCIYSPH*PQWNRI
Trigger: AATCCTATTCCATTGCGGGCAGTGAGGGGAGTATAT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286494.9
ENST00000333972.11
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACAAGGGCTCACTCTCTTaGCATCCTCATTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDKGSLS*HPHLSW
Trigger: CCAACTCAAATGAGGATGGCAAGAGAGTGAGCCCTT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR CCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCACATGCTCTGACTTaGGCTTATTCTGACAGTACA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPHALT*AYSDST
Trigger: TGTACTGTCAGAATAAGCCCAAGTCAGAGCATGTGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACAGACAATGTTTGGAATaGTCCAACCATCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDRQCLE*SNHLLR
Trigger: CCTGAGGAGATGGTTGGATCATTCCAAACATTGTCT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGTGTTTGATGAATAGCTaGGCCAGCCAATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRCLMNS*ASQSGS
Trigger: AGATCCTGATTGGCTGGCTCAGCTATTCATCAAACA...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGACTTGGGCTTATTCTaGCAGTACACCACATACATA +
Preference number: 4 (lower is better)
Translates to: PALPTLQTHQEGGILEQCDLGLF*QYTTYI
Trigger: TATGTATGTGGTGTACTGTCAGAATAAGCCCAAGTC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCTTGCCATCCTCATTTaGGTTGGCCAGGATAGAAAA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDLAILI*VGQDRK
Trigger: TTTTCTATCCTGGCCAACTCAAATGAGGATGGCAAG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTATTTCATGATCCGCTaGACAGGTTTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAYFMIR*TGLMRR
Trigger: CCTCCTCATCAAACCTGTGCAGCGGATCATGAAATA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR GCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTATTTCATGATCCGCTaGACAGGTTTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDYFMIR*TGLMRR
Trigger: CCTCCTCATCAAACCTGTGCAGCGGATCATGAAATA...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCCACATGCTCTGACTTaGGCTTATTCTGACAGTACA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRPHALT*AYSDST
Trigger: TGTACTGTCAGAATAAGCCCAAGTCAGAGCATGTGG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCACATGCTCTGACTTaGGCTTATTCTGACAGTACA +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPHALT*AYSDST
Trigger: TGTACTGTCAGAATAAGCCCAAGTCAGAGCATGTGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCCTCAGTTTCCACACTaGGACAATGTTTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAPQFPH*DNVWND
Trigger: ATCATTCCAAACATTGTCTCAGTGTGGAAACTGAGG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCCTCAGTTTCCACACTaGGACAATGTTTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDPQFPH*DNVWND
Trigger: ATCATTCCAAACATTGTCTCAGTGTGGAAACTGAGG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGACTTGGGCTTATTCTaGCAGTACACCACATACATA +
Preference number: 4 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRDLGLF*QYTTYI
Trigger: TATGTATGTGGTGTACTGTCAGAATAAGCCCAAGTC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR TCA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGACTTGGGCTTATTCTaGCAGTACACCACATACATA +
Preference number: 4 (lower is better)
Translates to: PSRHTKKEEFWSSARRTADLGLF*QYTTYI
Trigger: TATGTATGTGGTGTACTGTCAGAATAAGCCCAAGTC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS CCA 90 bp AGGCTGGGCCGGGATGCGGCAGCCGCTCCAGCTGTCTCCGGCCTCTaGTTAGGGGTGGCTCTAGGCCCGGGCCGGGGAGGAGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: RLGRDAAAAPAVSGL*LGVALGPGRGGGEG
Trigger: GCCCTCGCCTCCTCCCCGGCCCGGGCCTAGAGCCACCCCTAACCAGAGGCCGGAGACAGCTGGAGCGGCTGCCGCATCCCGGCCCAGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS CCA 90 bp AGGTCGTTCAGCTGCAGGCGGTGCCCCAGCTGCTGCCGGAGCTCCTaGGGACAGGGACAGGGTGGTTATGCAGCCTGGAAAGCCCCAGTT +
Preference number: 5 (lower is better)
Translates to: RSFSCRRCPSCCRSS*GQGQGGYAAWKAPV
Trigger: AACTGGGGCTTTCCAGGCTGCATAACCACCCTGTCCCTGTCCCCAGGAGCTCCGGCAGCAGCTGGGGCACCGCCTGCAGCTGAACGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471370.5
ENST00000484357.1
CDS GCA 90 bp GGGCAGCCAGACCGGAGGCAGCAGAAGCCGATATACTCCCCTCACTaGCCGCAATGGAATAGGATTCGGGCTGCAGAGCCCCGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: GQPDRRQQKPIYSPH*PQWNRIRAAEPRRG
Trigger: TCCTCGCCGGGGCTCTGCAGCCCGAATCCTATTCCATTGCGGGCAGTGAGGGGAGTATATCGGCTTCTGCTGCCTCCGGTCTGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGCCGCCCCAGGCTGTaGGTCTGGCTCTCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGRPRL*VWLSRL
Trigger: GAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS GCA 90 bp CAGGACATAGCGCTGGATCCCACCCTCTGGCCCTCTGGAGGTCAGTaGAAAGCGGCAAGGGTCACCTTGGAGGTTCCCCTCCAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QDIALDPTLWPSGGQ*KAARVTLEVPLQSQ
Trigger: CTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 90 bp CTGCAGCCTGCAGGACATAGCGCTGGATCCCACCCTCTGGCCCTCTaGAGGTCAGTGCAAAGCGGCAAGGGTCACCTTGGAGGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: LQPAGHSAGSHPLAL*RSVQSGKGHLGGSP
Trigger: AGGGGAACCTCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 90 bp AGCAGGGTCTGCAGCCTGCAGGACATAGCGCTGGATCCCACCCTCTaGCCCTCTGGAGGTCAGTGCAAAGCGGCAAGGGTCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SRVCSLQDIALDPTL*PSGGQCKAARVTLE
Trigger: CTCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACGGCCGCCCCAGGCTGTaGGTCTGGCTCTCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDGRPRL*VWLSRL
Trigger: GAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCC...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS TCA 90 bp GGCTGCAGAGCCCCGGCGAGGACCTCATGTTCGCGATCCCTTCTGTaGTCTCCCTCCGTACGTTCAGACTCTGGCTCGGTACCCACCAAC +
Preference number: 5 (lower is better)
Translates to: GCRAPARTSCSRSLL*SPSVRSDSGSVPTN
Trigger: GTTGGTGGGTACCGAGCCAGAGTCTGAACGTACGGAGGGAGATCACAGAAGGGATCGCGAACATGAGGTCCTCGCCGGGGCTCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS CCA 90 bp GGCCCTCTTGGCCGCCCCAGGCTGTTGGTCTGGCTCTCCCGTCTCTaGTACTCAATGGGTGACTGCAATGCGTTGAGGAAGTCCCGTTGG +
Preference number: 5 (lower is better)
Translates to: GPLGRPRLLVWLSRL*YSMGDCNALRKSRW
Trigger: CCAACGGGACTTCCTCAACGCATTGCAGTCACCCATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 90 bp CCCTCTGGCCCTCTGGAGGTCAGTGCAAAGCGGCAAGGGTCACCTTaGAGGTTCCCCTCCAGTCCCAGGCAGCTCACCTTAATGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PSGPLEVSAKRQGSP*RFPSSPRQLTLMLF
Trigger: GAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGCGGCAAGGGTCACCTaGGAGGTTCCCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRAARVT*EVPLQS
Trigger: GGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCGC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS GCA 90 bp GATCTGAGCCACATGCTTGATCCAGGCCTGACTGATAGCAGGGTCTaGAGCCTGCAGGACATAGCGCTGGATCCCACCCTCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: DLSHMLDPGLTDSRV*SLQDIALDPTLWPS
Trigger: AGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGTCAGGCCTGGATCAAGCATGTGGCTCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGGCGGAAGTCTAGTCTaGAGGAGGGCTGGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRGGSLV*RRAGGS
Trigger: AGAGCCCCCAGCCCTCCTCAAGACTAGACTTCCGCC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCTGGCCACCTCCCCTTaGGGTGACAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDLATSP*GDSSRE
Trigger: CTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCAG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCTGGCCACCTCCCCTTaGGGTGACAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTALATSP*GDSSRE
Trigger: CTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCAG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCTGGCCACCTCCCCTTaGGGTGACAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLATSP*GDSSRE
Trigger: CTCTCTGCTGCTGTCACCCAAAGGGGAGGTGGCCAG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCATATCCCTCCCAGCCTaGCCCACCCTCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCISLPA*PTLQTH
Trigger: GTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATAT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGGTGACTGCAATGCGTaGAGGAAGTCCCGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCGDCNA*RKSRWL
Trigger: GAGCCAACGGGACTTCCTCAACGCATTGCAGTCACC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACATATCCCTCCCAGCCTaGCCCACCCTCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDISLPA*PTLQTH
Trigger: GTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATAT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCTCACTCTCAGGGGCTaGGGACAAAGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCLTLRG*GQSLLF
Trigger: GAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTTGAGGAAGTCCCGTaGGCTCTCCAAGATCTGAGC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVEEVP*ALQDLS
Trigger: GCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGGTGACTGCAATGCGTaGAGGAAGTCCCGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRGDCNA*RKSRWL
Trigger: GAGCCAACGGGACTTCCTCAACGCATTGCAGTCACC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGAGGGGAGAGAGCCATaGATGGGTGTGTGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARREGREP*MGVCVL
Trigger: CAGCACACACACACCCATCAATGGCTCTCTCCCCTC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGAGGGGAGAGAGCCATaGATGGGTGTGTGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAEGREP*MGVCVL
Trigger: CAGCACACACACACCCATCAATGGCTCTCTCCCCTC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACGAGGGGAGAGAGCCATaGATGGGTGTGTGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDEGREP*MGVCVL
Trigger: CAGCACACACACACCCATCAATGGCTCTCTCCCCTC...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGCTTGGCAAGTCTGGCTaGGCAGGGAGGGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRLGKSG*AGRGFW
Trigger: CCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAG...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCTTGGCAAGTCTGGCTaGGCAGGGAGGGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTALGKSG*AGRGFW
Trigger: CCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACCTTGGCAAGTCTGGCTaGGCAGGGAGGGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDLGKSG*AGRGFW
Trigger: CCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAG...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCCTCACTCTCAGGGGCTaGGGACAAAGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTALTLRG*GQSLLF
Trigger: GAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAG...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCATATCGTTGCAGCGCTaGGGCACAAAGCACATGACC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCISLQR*GTKHMT
Trigger: GGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATAT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCAGCGTCATCATATCGTaGCAGCGCTTGGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCSVIIS*QRLGTK
Trigger: CTTTGTGCCCAAGCGCTGCAACGATATGATGACGCT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGTTGAGGAAGTCCCGTaGGCTCTCCAAGATCTGAGC +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRVEEVP*ALQDLS
Trigger: GCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAAC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTGTTCTCCTCCAAGTaGATATCCCTCCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVFSSK*ISLPAL
Trigger: CAAGGCTGGGAGGGATATCAACTTGGAGGAGAACAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS TCA 90 bp GCTCAGCCTCTCTCTCCAAGGGCTCACTCTCTTGCCATCCTCATTTaGGTTGGCCAGGATAGAAAATTTCACCAGGGCACCCCACGTCCC +
Preference number: 5 (lower is better)
Translates to: AQPLSPRAHSLAILI*VGQDRKFHQGTPRP
Trigger: GGGACGTGGGGTGCCCTGGTGAAATTTTCTATCCTGGCCAACTCAAATGAGGATGGCAAGAGAGTGAGCCCTTGGAGAGAGAGGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGAGCAGCAGCCGCATTTaGCCAGCACTTTTCGGATCA +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRSSSRI*PALFGS
Trigger: TGATCCGAAAAGTGCTGGCAAAATGCGGCTGCTGCT...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286494.9
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACAGCAGCAGCCGCATTTaGCCAGCACTTTTCGGATCA +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDSSSRI*PALFGS
Trigger: TGATCCGAAAAGTGCTGGCAAAATGCGGCTGCTGCT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286494.9
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCATATCGTTGCAGCGCTaGGGCACAAAGCACATGACC +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAISLQR*GTKHMT
Trigger: GGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATAT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACAGCGTCATCATATCGTaGCAGCGCTTGGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDSVIIS*QRLGTK
Trigger: CTTTGTGCCCAAGCGCTGCAACGATATGATGACGCT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp TGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGGTGTTCTCCTCCAAGTaGATATCCCTCCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: CPPSRHTKKEEFWSSARRVFSSK*ISLPAL
Trigger: CAAGGCTGGGAGGGATATCAACTTGGAGGAGAACAC...CCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAAGGGCTCACTCTCTaGCCATCCTCATTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCQGLTL*PSSFEL
Trigger: CAACTCAAATGAGGATGGCAAGAGAGTGAGCCCTTG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCGTGCCACTCATAGATTaGCTGGATATTCCCAAACAC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCVPLID*LDIPKH
Trigger: GTGTTTGGGAATATCCAGCAAATCTATGAGTGGCAC...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS TCA 90 bp AAAGCCCCAGTTCTGTCCTCCTTCCCACCAAGACATCTCAGCTACTaGCCTCAAAGTAGCTGTCCCCAAACTCTGACACCACATGCTCTG +
Preference number: 5 (lower is better)
Translates to: KAPVLSSFPPRHLSY*PQSSCPQTLTPHAL
Trigger: CAGAGCATGTGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGTCAGTAGCTGAGATGTCTTGGTGGGAAGGAGGACAGAACTGGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471370.5
CDS CCA 90 bp TTCACCAGTTACAGCTCATCTTCATCCAGCTTGGCAAGTCTGGCTTaGCAGGGAGGGGTTTTTGGAGTTGGAGAGACTGGAGGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: FTSYSSSSSSLASLA*QGGVFGVGETGGES
Trigger: TGACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATGAGCTGTAACTGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCGTGCCACTCATAGATTaGCTGGATATTCCCAAACAC +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAVPLID*LDIPKH
Trigger: GTGTTTGGGAATATCCAGCAAATCTATGAGTGGCAC...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCTACTTGAGAAAATCCTaGAGCAGCAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCYLRKS*SSSWYF
Trigger: GAAATACCAGCTGCTGCTCAAGGATTTTCTCAAGTA...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCCATCCTCATTTGAGTaGGCCAGGATAGAAAATTTC +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCPSSFE*ARIENF
Trigger: GAAATTTTCTATCCTGGCCAACTCAAATGAGGATGG...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCTACTTGAGAAAATCCTaGAGCAGCAGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTAYLRKS*SSSWYF
Trigger: GAAATACCAGCTGCTGCTCAAGGATTTTCTCAAGTA...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCAGCCTTGCCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCACCTTAATGCTGTTCTaGTATACATATCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PALPTLQTHQEGGILEQCTLMLF*YTYPGC
Trigger: ACAGCCTGGATATGTATACAAGAACAGCATTAAGGT...GCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCACCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACACCTTAATGCTGTTCTaGTATACATATCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PTLQTHQEGGILEQCQKDTLMLF*YTYPGC
Trigger: ACAGCCTGGATATGTATACAAGAACAGCATTAAGGT...GTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS-3UTR CAA 90 bp CCCTCCAGACACACCAAGAAGGAGGAATTCTGGAGCAGTGCCAGAAGGACTGCCACCTTAATGCTGTTCTaGTATACATATCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PSRHTKKEEFWSSARRTATLMLF*YTYPGC
Trigger: ACAGCCTGGATATGTATACAAGAACAGCATTAAGGT...GGCAGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS GCA 90 bp TGGCTCCAACATCCAGTTCTCATATGGTCCTGCCTGACCACTGTCTaGCTCAGTTTCCACACTGAGACAATGTTTGGAATGATCCAACCA +
Preference number: 5 (lower is better)
Translates to: WLQHPVLIWSCLTTV*LSFHTETMFGMIQP
Trigger: TGGTTGGATCATTCCAAACATTGTCTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCAGGACCATATGAGAACTGGATGTTGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS CCA 72 bp CGGGATGCGGCAGCCGCTCCAGCTGTCTCCGGCCTCTaGTTAGGGGTGGCTCTAGGCCCGGGCCGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: RDAAAAPAVSGL*LGVALGPGRGG
Trigger: TCCTCCCCGGCCCGGGCCTAGAGCCACCCCTAACCAGAGGCCGGAGACAGCTGGAGCGGCTGCCGCATCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS CCA 72 bp TGCAGCCTGCAGGACATAGCGCTGGATCCCACCCTCTaGCCCTCTGGAGGTCAGTGCAAAGCGGCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: CSLQDIALDPTL*PSGGQCKAARV
Trigger: GACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CAA 72 bp GGGAGGAGGTGTCCAGGGGTAGGCGGAAGTCTAGTCTaGAGGAGGGCTGGGGGCTCTAGAGAGAGAGAGGCG +
Preference number: 6 (lower is better)
Translates to: GRRCPGVGGSLV*RRAGGSREREA
Trigger: CGCCTCTCTCTCTCTAGAGCCCCCAGCCCTCCTCAAGACTAGACTTCCGCCTACCCCTGGACACCTCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286494.9
CDS CCA 72 bp GCAGGACATAGCGCTGGATCCCACCCTCTGGCCCTCTaGAGGTCAGTGCAAAGCGGCAAGGGTCACCTTGGA +
Preference number: 6 (lower is better)
Translates to: AGHSAGSHPLAL*RSVQSGKGHLG
Trigger: TCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS TCA 72 bp GCCCCGGCGAGGACCTCATGTTCGCGATCCCTTCTGTaGTCTCCCTCCGTACGTTCAGACTCTGGCTCGGTA +
Preference number: 6 (lower is better)
Translates to: APARTSCSRSLL*SPSVRSDSGSV
Trigger: TACCGAGCCAGAGTCTGAACGTACGGAGGGAGATCACAGAAGGGATCGCGAACATGAGGTCCTCGCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS GCA 72 bp GACCGGAGGCAGCAGAAGCCGATATACTCCCCTCACTaGCCGCAATGGAATAGGATTCGGGCTGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: DRRQQKPIYSPH*PQWNRIRAAEP
Trigger: GGGCTCTGCAGCCCGAATCCTATTCCATTGCGGGCAGTGAGGGGAGTATATCGGCTTCTGCTGCCTCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS CCA 72 bp CCTCTGGAGGTCAGTGCAAAGCGGCAAGGGTCACCTTaGAGGTTCCCCTCCAGTCCCAGGCAGCTCACCTTA +
Preference number: 6 (lower is better)
Translates to: PLEVSAKRQGSP*RFPSSPRQLTL
Trigger: TAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCGCTTTGCACTGACCTCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 72 bp GGCCGCCCCAGGCTGTTGGTCTGGCTCTCCCGTCTCTaGTACTCAATGGGTGACTGCAATGCGTTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GRPRLLVWLSRL*YSMGDCNALRK
Trigger: CTTCCTCAACGCATTGCAGTCACCCATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 72 bp CAGCAGAAGCCGATATACTCCCCTCACTGCCCGCAATaGAATAGGATTCGGGCTGCAGAGCCCCGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: QQKPIYSPHCPQ*NRIRAAEPRRG
Trigger: TCCTCGCCGGGGCTCTGCAGCCCGAATCCTATTCCATTGCGGGCAGTGAGGGGAGTATATCGGCTTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333972.11
CDS GCA 72 bp CACATGCTTGATCCAGGCCTGACTGATAGCAGGGTCTaGAGCCTGCAGGACATAGCGCTGGATCCCACCCTC +
Preference number: 6 (lower is better)
Translates to: HMLDPGLTDSRV*SLQDIALDPTL
Trigger: GAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGTCAGGCCTGGATCAAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS CCA 72 bp GGCCTCGAAGACTCTCGGGGACCCCCTGAGCAGCCATaGTGGCCATATAACCCTGTGGGAAAGTTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GLEDSRGPPEQP*WPYNPVGKLRL
Trigger: CAACCTCAACTTTCCCACAGGGTTATATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAGTCTTCGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471370.5
CDS GCA 72 bp CCCCACCTCGCCCACTCCCAGCAGTTTCGAGCTGTCTaGCCTGGTAGTGTGCCCTACAAAACTTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: PHLAHSQQFRAV*PGSVPYKTSPN
Trigger: GTTTGGAGAAGTTTTGTAGGGCACACTACCAGGGCAGACAGCTCGAAACTGCTGGGAGTGGGCGAGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471370.5
CDS CAA 72 bp CGCAATCTCCCCAGCGTCATCATATCGTTGCAGCGCTaGGGCACAAAGCACATGACCTCCACAGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: RNLPSVIISLQR*GTKHMTSTACS
Trigger: AGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS CAA 90 bp TCAAATCCCCGCAATCTCCCCAGCGTCATCATATCGTTGCAGCGCTaGGGCACAAAGCACATGACCTCCACAGCTTGCTCTAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SNPRNLPSVIISLQR*GTKHMTSTACSRSA
Trigger: TGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS CAA 90 bp AGTTTGCCCTCAAATCCCCGCAATCTCCCCAGCGTCATCATATCGTaGCAGCGCTTGGGCACAAAGCACATGACCTCCACAGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: SLPSNPRNLPSVIIS*QRLGTKHMTSTACS
Trigger: AGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGAGGGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS CAA 72 bp TCAAATCCCCGCAATCTCCCCAGCGTCATCATATCGTaGCAGCGCTTGGGCACAAAGCACATGACCTCCACA +
Preference number: 6 (lower is better)
Translates to: SNPRNLPSVIIS*QRLGTKHMTST
Trigger: TGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS TCA 72 bp CCTGCCCCCTCAAGCCTCACGTGTTTGATGAATAGCTaGGCCAGCCAATCAGGATCTTTCAGACACCGTTGT +
Preference number: 6 (lower is better)
Translates to: PAPSSLTCLMNS*ASQSGSFRHRC
Trigger: ACAACGGTGTCTGAAAGATCCTGATTGGCTGGCTCAGCTATTCATCAAACACGTGAGGCTTGAGGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471370.5
CDS CAA 90 bp TTTCACCAGTTACAGCTCATCTTCATCCAGCTTGGCAAGTCTGGCTaGGCAGGGAGGGGTTTTTGGAGTTGGAGAGACTGGAGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: FHQLQLIFIQLGKSG*AGRGFWSWRDWRRV
Trigger: GACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATGAGCTGTAACTGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000471370.5
ENST00000616622.1
CDS TCA 72 bp TCATCATATCGTTGCAGCGCTTGGGCACAAAGCACATaGCCTCCACAGCTTGCTCTAGGTCTGCAGTATCCA +
Preference number: 6 (lower is better)
Translates to: SSYRCSAWAQST*PPQLALGLQYP
Trigger: TGGATACTGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS TCA 72 bp GTTCTGTCCTCCTTCCCACCAAGACATCTCAGCTACTaGCCTCAAAGTAGCTGTCCCCAAACTCTGACACCA +
Preference number: 6 (lower is better)
Translates to: VLSSFPPRHLSY*PQSSCPQTLTP
Trigger: TGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGTCAGTAGCTGAGATGTCTTGGTGGGAAGGAGGACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471370.5
ENST00000484357.1
CDS CAA 72 bp GAGTTCCACCACTCACTCTCGGTGCCACTCATAGATTaGCTGGATATTCCCAAACACAATCCTGTCACGGCC +
Preference number: 6 (lower is better)
Translates to: EFHHSLSVPLID*LDIPKHNPVTA
Trigger: GGCCGTGACAGGATTGTGTTTGGGAATATCCAGCAAATCTATGAGTGGCACCGAGAGTGAGTGGTGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471370.5
CDS TCA 72 bp TACATATGCAGCCGGCGCTCGTGTTTGATGAATAGCTaGGCCAGCCAATCAGGATCTTTCAGACACCGTTGT +
Preference number: 6 (lower is better)
Translates to: YICSRRSCLMNS*ASQSGSFRHRC
Trigger: ACAACGGTGTCTGAAAGATCCTGATTGGCTGGCTCAGCTATTCATCAAACACGAGCGCCGGCTGCATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS GCA 72 bp CATCCAGTTCTCATATGGTCCTGCCTGACCACTGTCTaGCTCAGTTTCCACACTGAGACAATGTTTGGAATG +
Preference number: 6 (lower is better)
Translates to: HPVLIWSCLTTV*LSFHTETMFGM
Trigger: CATTCCAAACATTGTCTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCAGGACCATATGAGAACTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS CCA 72 bp AGCTGTCCCCAAACTCTGACACCACATGCTCTGACTTaGGCTTATTCTGACAGTACACCACATACATATGCA +
Preference number: 6 (lower is better)
Translates to: SCPQTLTPHALT*AYSDSTPHTYA
Trigger: TGCATATGTATGTGGTGTACTGTCAGAATAAGCCCAAGTCAGAGCATGTGGTGTCAGAGTTTGGGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000466399.1
ENST00000469072.5
ENST00000471370.5
ENST00000616622.1
CDS CAA 72 bp CTCTTGCAAGAAATAGTCTCGGTGCCACTCATAGATTaGCTGGATATTCCCAAACACAATCCTGTCACGGCC +
Preference number: 6 (lower is better)
Translates to: LLQEIVSVPLID*LDIPKHNPVTA
Trigger: GGCCGTGACAGGATTGTGTTTGGGAATATCCAGCAAATCTATGAGTGGCACCGAGACTATTTCTTGCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286494.9
ENST00000333972.11
ENST00000616622.1
CDS CCA 72 bp CCTACAAAACTTCTCCAAACATTCCTTAAGTCGCAATaGGCTGATGTTAGGATACAGGACAACCAGATGAGG +
Preference number: 6 (lower is better)
Translates to: PTKLLQTFLKSQ*ADVRIQDNQMR
Trigger: CCTCATCTGGTTGTCCTGTATCCTAACATCAGCCCATTGCGACTTAAGGAATGTTTGGAGAAGTTTTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471370.5