RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116584

Ensembl transcript IDs: ENST00000313667.8, ENST00000313695.11, ENST00000361247.9, ENST00000368315.8, ENST00000423422.6, ENST00000462460.6, ENST00000465079.1, ENST00000470541.6, ENST00000470874.5, ENST00000470975.2, ENST00000471589.5, ENST00000474428.6, ENST00000476273.1, ENST00000477754.2, ENST00000487755.1, ENST00000495070.2, ENST00000497907.5, ENST00000608543.1, ENST00000609707.1, ENST00000673475.1

Found 1076 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGACTGTGGGGCGGAGACAGACGGCTGCTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGC +
Preference number: 1 (lower is better)
Translates to: VDCGAETDGCYLPPR*QCQGHCCLAAALRG
Trigger: GCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGCCCCACAGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR GCA 90 bp GGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGAT +
Preference number: 1 (lower is better)
Translates to: GSRVLWLQPLLQDGC*RGGPLGQEPSSCVD
Trigger: ATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 90 bp GCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTaGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCG +
Preference number: 1 (lower is better)
Translates to: ALPTALLYLKGSRVL*LQPLLQDGCCRGGP
Trigger: CGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 90 bp GGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAGTTTCGATGGACAGAGCGAGTAGTG +
Preference number: 1 (lower is better)
Translates to: GSLLSCSRSSGLPSS*LSRSSKFRWTERVV
Trigger: CACTACTCGCTCTGTCCATCGAAACTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR GCA 90 bp GACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATATACCCCAGTAGTGTTCAAGGACAAG +
Preference number: 1 (lower is better)
Translates to: DGCCRGGPLGQEPSS*VDEPEYTPVVFKDK
Trigger: CTTGTCCTTGAACACTACTGGGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 90 bp ATTTTCCTAAAGTTGCGGGAAGAAGGCATGAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCC +
Preference number: 1 (lower is better)
Translates to: IFLKLREEGMNHWHL*CSFRMSQGVLWPNS
Trigger: GGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCAACTTTAGGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTaGAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCC +
Preference number: 1 (lower is better)
Translates to: MAPGIQGSQELARTI*SSFKCSLIIGKLES
Trigger: GGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 90 bp GCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTT +
Preference number: 1 (lower is better)
Translates to: AGKDNLQFFQMFPHH*QIGVPKVSPLSNVL
Trigger: AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 2 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RDMALPTALLYLKGSRVLDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAATGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 2 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 2 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPELIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: MALPTALLYLKGSRVLWLEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 2 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPENPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLREEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTGCGGAGACAGACGGCTaGTACCTTCCTCCTCGCTGC +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCAETDG*YLPPRC
Trigger: GCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGC...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 2 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPENHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR TCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 2 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR TCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: RDMALPTALLYLKGSRVLSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 2 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 2 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTCAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: RDMALPTALLYLKGSRVLEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 2 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: RDMALPTALLYLKGSRVLMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: RDMALPTALLYLKGSRVLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: MALPTALLYLKGSRVLWLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: MKDGERENSSKRLRGEEKLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCCCAACAAACCATTATaGCCACCCCAACCTTTATTC +
Preference number: 2 (lower is better)
Translates to: MALPTALLYLKGSRVLWLPNKPL*PPQPLF
Trigger: GAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 2 (lower is better)
Translates to: PRASMKDGERENSSKRLRSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 2 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 2 (lower is better)
Translates to: MKDGERENSSKRLRGEEKQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 2 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CAA 90 bp GGTTTCAGGTCATGGTTGCTGAGGTGGAAGATGAGGTCAGGGCTCTaGGAGATTTTCCAACCCACCCTAGAACTTGTTTCTAAATGGCTG +
Preference number: 2 (lower is better)
Translates to: GFRSWLLRWKMRSGL*EIFQPTLELVSKWL
Trigger: CAGCCATTTAGAAACAAGTTCTAGGGTGGGTTGGAAAATCTCCAAGAGCCCTGACCTCATCTTCCACCTCAGCAACCATGACCTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: MAPGIQGSQELARTICSSMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR GCA 90 bp ATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCCACACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCAT +
Preference number: 2 (lower is better)
Translates to: ILLLHHLLFMLLQEAAVHTPRVS*KVLLIH
Trigger: ATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGT...GTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
3UTR-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CAA 90 bp AGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATaGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: RTICSSFKCSLIIGK*ESPRLAPSVMFFSG
Trigger: CCCACTGAAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp GGGGCGGAGACAGACGGCTGCTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGCTGTCTTGCAGCCGCT +
Preference number: 3 (lower is better)
Translates to: GAETDGCYLPPR*QCQGHCCLAAA
Trigger: AGCGGCTGCAAGACAGCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR CAA 90 bp ACAGCCTCCCCGTCGCGGCTCTCCGTCTCCTCCGGGATGTCCTGCATTCTGGTAAGGGTCACTGCTGTCTaGCAGCCGCTCTTCGGGGCT +
Preference number: 3 (lower is better)
Translates to: TASPSRLSVSSGMSCILVRVTAV*QPLFGA
Trigger: AGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCT...TACCAGAATGCAGGACATCCCGGAGGAGACGGAGAGCCGCGACGGGGAGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR GCA 72 bp GTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VLWLQPLLQDGC*RGGPLGQEPSS
Trigger: GCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGATGTCCCAGGGGGTGTaGTGGCCTAATTCCCCTAGC +
Preference number: 3 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGMSQGV*WPNSPS
Trigger: GCTAGGGGAATTAGGCCACAACACCCCCTGGGACAT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAATGTCCCAGGGGGTGTaGTGGCCTAATTCCCCTAGC +
Preference number: 3 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQMSQGV*WPNSPS
Trigger: GCTAGGGGAATTAGGCCACAACACCCCCTGGGACAT...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGTCTGATCCCTATGGCTaGGTTCCCATGTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLSDPYG*VPMSLV
Trigger: GACCAGGGACATGGGAACCAAGCCATAGGGATCAGA...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp CTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAGTTTCGATGGACAGAG +
Preference number: 3 (lower is better)
Translates to: LSCSRSSGLPSS*LSRSSKFRWTE
Trigger: CTCTGTCCATCGAAACTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
3UTR-3UTR CAA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGATGTCCCAGGGGGTGTaGTGGCCTAATTCCCCTAGC +
Preference number: 3 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVMSQGV*WPNSPS
Trigger: GCTAGGGGAATTAGGCCACAACACCCCCTGGGACAT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATATACCCCAGTAGTGTTC +
Preference number: 3 (lower is better)
Translates to: CRGGPLGQEPSS*VDEPEYTPVVF
Trigger: GAACACTACTGGGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGAATGTTCCCTCATCATaGGCAAATTGGAGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGNVPSS*ANWSPQ
Trigger: TTGGGGACTCCAATTTGCCAATGATGAGGGAACATT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAATGTTCCCTCATCATaGGCAAATTGGAGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCNVPSS*ANWSPQ
Trigger: TTGGGGACTCCAATTTGCCAATGATGAGGGAACATT...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAAATGTTCCCTCATCATaGGCAAATTGGAGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQNVPSS*ANWSPQ
Trigger: TTGGGGACTCCAATTTGCCAATGATGAGGGAACATT...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 72 bp AAGTTGCGGGAAGAAGGCATGAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGG +
Preference number: 3 (lower is better)
Translates to: KLREEGMNHWHL*CSFRMSQGVLW
Trigger: CCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 72 bp AGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCCTTTAAATCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: SVQGQGPLIPMA*FPCPWSFKSPL
Trigger: GAGGGGAGATTTAAAGGACCAGGGACATGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGAATGTTCCCTCATCATaGGCAAATTGGAGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: MALPTALLYLKGSRVLWLNVPSS*ANWSPQ
Trigger: TTGGGGACTCCAATTTGCCAATGATGAGGGAACATT...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp GCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCCAAGAGTCAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: ASSPPFYAAAGS*CPQQDSKSQLQ
Trigger: TTGCAGCTGACTCTTGGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
3UTR CCA 72 bp ATTTTCCTAAAGTTGCGGGAAGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: IFLKLREEGMNH*HLWCSFRMSQG
Trigger: CCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCAACTTTAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR TCA 72 bp GCAAGGGTTCCACTGAAAAATCCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTGCTGAGGTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: ARVPLKNPPNSR*GFRSWLLRWKM
Trigger: CATCTTCCACCTCAGCAACCATGACCTGAAACCTCAGCGTGAATTTGGGGGATTTTTCAGTGGAACCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTATGTCCCAGGGGGTGTaGTGGCCTAATTCCCCTAGC +
Preference number: 3 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGMSQGV*WPNSPS
Trigger: GCTAGGGGAATTAGGCCACAACACCCCCTGGGACAT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCTGATCCCTATGGCTaGGTTCCCATGTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSDPYG*VPMSLV
Trigger: GACCAGGGACATGGGAACCAAGCCATAGGGATCAGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp GAAGCTGCTGTCCACAGCAAGACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCATCTCAAAGTCACTCAT +
Preference number: 3 (lower is better)
Translates to: EAAVHSKTPRVS*KVLLIHLKVTH
Trigger: ATGAGTGACTTTGAGATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGTCTTGCTGTGGACAGCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470874.5
3UTR-3UTR CAA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTCTGATCCCTATGGCTaGGTTCCCATGTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANSDPYG*VPMSLV
Trigger: GACCAGGGACATGGGAACCAAGCCATAGGGATCAGA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTCTGATCCCTATGGCTaGGTTCCCATGTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSDPYG*VPMSLV
Trigger: GACCAGGGACATGGGAACCAAGCCATAGGGATCAGA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR CCA 72 bp CTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCC +
Preference number: 3 (lower is better)
Translates to: LKWPQVSKDPKS*QGQFAVLSNVP
Trigger: GGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR GCA 72 bp GGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTaGAGTTCTTTCAAATGTTCCCTCATCATTGGCAAA +
Preference number: 3 (lower is better)
Translates to: GIQGSQELARTI*SSFKCSLIIGK
Trigger: TTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
3UTR-3UTR CAA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTAATGTTCCCTCATCATaGGCAAATTGGAGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGNVPSS*ANWSPQ
Trigger: TTGGGGACTCCAATTTGCCAATGATGAGGGAACATT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCGGAGGCTACAGCCTCCCCGTCGCGGCTCTCCGTCTCCTCCGGGATGTCCTGCGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SEATASPSRLSVSSGMSCEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...GCAGGACATCCCGGAGGAGACGGAGAGCCGCGACGGGGAGGCTGTAGCCTCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp TCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGSLLSCSRSSGLPSSCLGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...GAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTACCCCGTGCCGCTTaGGCACGGCGGGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVPRAA*ARRGGS
Trigger: TGACCCGCCCCGCCGTGCTCAAGCGGCACGGGGTAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGTACAGGGCATCGCCTaGGGGGAGGCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLVQGIA*GEAAPP
Trigger: CGGCGGCGCAGCCTCCCCGCAGGCGATGCCCTGTAC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ACAGCCTCCCCGTCGCGGCTCTCCGTCTCCTCCGGGATGTCCTGCATTCTGGTATCGCCTGCGGGGAGCTaGGCCGCCGAGGATCCACAG +
Preference number: 4 (lower is better)
Translates to: TASPSRLSVSSGMSCILVSPAGS*AAEDPQ
Trigger: CTGTGGATCCTCGGCGGCGCAGCTCCCCGCAGGCGA...TACCAGAATGCAGGACATCCCGGAGGAGACGGAGAGCCGCGACGGGGAGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp TCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCGTACAGGGCATCGCCTaGGGGGAGCTGCGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: SGSLLSCSRSSGLPSSCLVQGIA*GELRRR
Trigger: TCGGCGGCGCAGCTCCCCGCAGGCGATGCCCTGTAC...GAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGCCTCAGCTGGGAGTaGCTCGGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGLSWE*LGLAQG
Trigger: GCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGGCCTCAGCTGGGAGTaGCTCGGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEGLSWE*LGLAQG
Trigger: GCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAGCCCAGGAGGGACTaGCGGAAGCTGTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQEPRRD*RKLSEG
Trigger: CCCCTCCGACAGCTTCCGGCAGTCCCTCCTGGGCTC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACACTCCTGTACCCCGTaGCGCTTGAGCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEHSCTP*RLSTAG
Trigger: CCCCGCCGTGCTCAAGCGGCACGGGGTACAGGAGTG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTGCTCGCCAGCTCTCTaGTCCGGTCGATCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCCSPAL*SGRSAP
Trigger: GGGCGCGGATCGACCGGAGCAGAGAGCTGGCGAGCA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361247.9
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCCAGGCACTGGGGTTTaGGCCCGAGGGTCCATGCGG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGPGTGV*ARGSMR
Trigger: CCGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAGCGGAAAAGGCCCCTaGGCAGGGTGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCSGKGP*AGWAGP
Trigger: TGGCCCTGCCCACCCTGCCCAGGGGCCTTTTCCGCT...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGGAGTCTGTGGACTGTaGGAGGATCCGGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLGVCGL*EDPAQP
Trigger: GGGCTGCGCCGGATCCTCTCACAGTCCACAGACTCC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGAGTCTGTGGACTGTaGGAGGATCCGGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGVCGL*EDPAQP
Trigger: GGGCTGCGCCGGATCCTCTCACAGTCCACAGACTCC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGGCCCGGAAAGCCCCTaGCCTTTGGAGGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLGPESP*PLEGYS
Trigger: GCTGTACCCCTCCAAAGGTCAGGGGCTTTCCGGGCC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGLTLQQ*PGLLTL
Trigger: GAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPELTLQQ*PGLLTL
Trigger: GAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGTACAGGGCATCGCCTaGGGGGAGGCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVVQGIA*GEAAPP
Trigger: CGGCGGCGCAGCCTCCCCGCAGGCGATGCCCTGTAC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGTACAGGGCATCGCCTaGGGGGAGGCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLVQGIA*GEAAPP
Trigger: CGGCGGCGCAGCCTCCCCGCAGGCGATGCCCTGTAC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATGTCGGAGGGGTAGATaGCCGAGCTTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPECRRGR*PSLAAP
Trigger: GGGAGCGGCCAAGCTCGGCCATCTACCCCTCCGACA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCCCCCATCCCGAGAGTTaGCTCGGCACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGSLLSCSRSSGLPSSCLPHPES*LGTASP
Trigger: GGGAGAAGCTGTGCCGAGCCAACTCTCGGGATGGGG...GAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGGCCTCCTTGGGGCCTaGGCATCCCGATGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEGLLGA*ASRCLQ
Trigger: CTGCAAGCATCGGGATGCCCAGGCCCCAAGGAGGCC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGGCCTCCTTGGGGCCTaGGCATCCCGATGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCGLLGA*ASRCLQ
Trigger: CTGCAAGCATCGGGATGCCCAGGCCCCAAGGAGGCC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGAAGAGGGCCTCCTTaGGGCCTGGGCATCCCGATG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGRGPP*GLGIPM
Trigger: CATCGGGATGCCCAGGCCCCAAGGAGGCCCTCTTCC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGTACCCCGTGCCGCTTaGGCACGGCGGGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRVPRAA*ARRGGS
Trigger: TGACCCGCCCCGCCGTGCTCAAGCGGCACGGGGTAC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGTGCGCACGCTCTGCTaGATGACCCGGATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQVRTLC*MTRIQV
Trigger: CACCTGGATCCGGGTCATTCAGCAGAGCGTGCGCAC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGCGCACGCTCTGCTaGATGACCCGGATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVRTLC*MTRIQV
Trigger: CACCTGGATCCGGGTCATTCAGCAGAGCGTGCGCAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAATGCCCGAGAGGAAGCTaGAGGTCTGTCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQCPRGS*RSVAGR
Trigger: CCTCCCTGCGACAGACCTTCAGCTTCCTCTCGGGCA...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGTCACGGATGGCATCCTaGAGCAGCCGCTCGCCACGA +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLSRMAS*SSRSPR
Trigger: TCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGA...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GCGGCTCTCCGTCTCCTCCGGGATGTCCTGCATTCTGGTAAAGTCTCGTGGACTGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: AALRLLRDVLHSGKVSWTAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...AGTCCACGAGACTTTACCAGAATGCAGGACATCCCGGAGGAGACGGAGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACCAGGGCACAGGGCCTaGCGTCGGCGTTCTAATAGC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEPGHRA*RRRSNS
Trigger: GCTATTAGAACGCCGACGCCAGGCCCTGTGCCCTGG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTAGCCCCAGTGCTGTaGTCAGGTCCTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLLAPVL*SGPGAP
Trigger: AGGAGCGCCAGGACCTGACCACAGCACTGGGGCTAG...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCTCCACCTCACGGATaGCATCCTGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLPPPHG*HPAAAA
Trigger: AGCGGCTGCTGCAGGATGCCATCCGTGAGGTGGAGG...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACCCCATCCCGAGAGTTaGCTCGGCACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEPHPES*LGTASP
Trigger: GGGAGAAGCTGTGCCGAGCCAACTCTCGGGATGGGG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCCCCATCCCGAGAGTTaGCTCGGCACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGPHPES*LGTASP
Trigger: GGGAGAAGCTGTGCCGAGCCAACTCTCGGGATGGGG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACAGGGTCTCACCTCGTaGACTGTGGGGCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQQGLTS*TVGRRQ
Trigger: CTGTCTCCGCCCCACAGTCCACGAGGTGAGACCCTG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470541.6
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGCCTACCCGGGTACCTaGATGTCCTTCCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGAYPGT*MSFQLA
Trigger: AGCCAGCTGGAAGGACATTCAGGTACCCGGGTAGGC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGGCCCGAGGGTCCATaGGGTTGTAGATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGPEGP*GCRSPA
Trigger: TGCAGGAGATCTACAACCGCATGGACCCTCGGGCCC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACAGCAGCTCCACCAGTaGCCGGTCCTTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQQQLHQ*PVLLLQ
Trigger: TTGCAGCAGAAGGACCGGGCACTGGTGGAGCTGCTG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCAGCAGCTCCACCAGTaGCCGGTCCTTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCQQLHQ*PVLLLQ
Trigger: TTGCAGCAGAAGGACCGGGCACTGGTGGAGCTGCTG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ACAGAGCGAGTAGTGACAGGTAGATCCAGGCGGTCAGTGCCTCGGCTGGGCTGTGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TERVVTGRSRRSVPRLGCASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...ACAGCCCAGCCGAGGCACTGACCGCCTGGATCTACCTGTCACTACTCGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGTTACCACCGCTGTCTaGTTCCAAGGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLVTTAV*FQGQGW
Trigger: CCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAAC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGCCTCAGCTGGGAGTaGCTCGGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRGLSWE*LGLAQG
Trigger: GCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGAAGTCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLKSRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGACTT...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGTATGGATGTCACTaGGCTCGTCCACGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVYGCH*ARPRRG
Trigger: TCCCCTGCGTGGACGAGCTCAGTGACATCCATACAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGTGTATGGATGTCACTaGGCTCGTCCACGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGVYGCH*ARPRRG
Trigger: TCCCCTGCGTGGACGAGCTCAGTGACATCCATACAC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACTCCGCACTAGGACCTaGGAACTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPELRTRT*ELADEQ
Trigger: CTGCTCATCAGCCAGTTCTCAGGTCCTAGTGCGGAG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCTCCCAGGGCTTCCATaGAGGACGGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGLPGLP*RTEKGR
Trigger: TCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGGAG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGAAAGS*CPQQDS
Trigger: GGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCAAAGTTCCGGGTGCTaGCAGGGCACAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVQSSGC*QGTGPG
Trigger: GCCAGGCCCTGTGCCCTGGCAGCACCCGGAACTTTG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCCTTGCTGTGGCGGCTaGAGAACTCCGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCPCCGG*RTPSRS
Trigger: AGACCTACTCGGAGTTCTGCAGCCGCCACAGCAAGG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCCGGTCATCCCGGGATaGTGTGTGCACCTCGTACAT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGPVIPG*CVHLVH
Trigger: ATGTACGAGGTGCACACAGCATCCCGGGATGACCGG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCTGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGSLLSCSRSSGLPSSCLCSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...GAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVRRSSS*SSACCR
Trigger: GCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLLTLQQ*PGLLTL
Trigger: GAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAATACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGTCGGAGGGGTAGATaGCCGAGCTTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLCRRGR*PSLAAP
Trigger: GGGAGCGGCCAAGCTCGGCCATCTACCCCTCCGACA...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGCTGTGGTCAGGTCCTaGCGCTCCTCCTCGATCCCG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLAVVRS*RSSSIP
Trigger: CGGGATCGAGGAGGAGCGCCAGGACCTGACCACAGC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGAGCGGAAAAGGCCCCTaGGCAGGGTGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRSGKGP*AGWAGP
Trigger: TGGCCCTGCCCACCCTGCCCAGGGGCCTTTTCCGCT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAATGCCAGTGGCCGAGTaGTCCAAAGGGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEMPVAE*SKGPAD
Trigger: ATCTGCTGGCCCTTTGGACCACTCGGCCACTGGCAT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGGACGGCTCTGTTCGTaGGAGACACACACAGACCAG +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLGRLCS*ETHTDQ
Trigger: CTGGTCTGTGTGTGTCTCCCACGAACAGAGCCGTCC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTGCTCAGAACACGTCTaGGACGGCTCTGTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGCSEHV*DGSVRG
Trigger: CCCACGAACAGAGCCGTCCCAGACGTGTTCTGAGCA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAGTACCCCGTGCCGCTTaGGCACGGCGGGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPVPRAA*ARRGGS
Trigger: TGACCCGCCCCGCCGTGCTCAAGCGGCACGGGGTAC...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAGGTGGGGCTGCGCTaGTCAGAAACATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLQVGLR*SETSLS
Trigger: AGAAAGGGATGTTTCTGATCAGCGCAGCCCCACCTG...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGCACGCTCTGCTGAATaGCCCGGATCCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLARSAE*PGSRCS
Trigger: GGAGCACCTGGATCCGGGTCATTCAGCAGAGCGTGC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGTGCGCACGCTCTGCTaGATGACCCGGATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLVRTLC*MTRIQV
Trigger: CACCTGGATCCGGGTCATTCAGCAGAGCGTGCGCAC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGTGCGCACGCTCTGCTaGATGACCCGGATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVVRTLC*MTRIQV
Trigger: CACCTGGATCCGGGTCATTCAGCAGAGCGTGCGCAC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCCTCTGCTTCGTCAATaGGGGATTCCACGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCPLLRQ*GIPRIG
Trigger: CCCTATCCGTGGAATCCCTCATTGACGAAGCAGAGG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGTCCAAGAGACAGTTaGTGCCACTCACGGGTACAG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGPRDS*CHSRVQ
Trigger: CTGTACCCGTGAGTGGCATCAACTGTCTCTTGGACC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGCCCGAGAGGAAGCTaGAGGTCTGTCGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLCPRGS*RSVAGR
Trigger: CCTCCCTGCGACAGACCTTCAGCTTCCTCTCGGGCA...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTGAGCCCAGGAGGGACTaGCGGAAGCTGTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCEPRRD*RKLSEG
Trigger: CCCCTCCGACAGCTTCCGGCAGTCCCTCCTGGGCTC...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACACTCCTGTACCCCGTaGCGCTTGAGCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLHSCTP*RLSTAG
Trigger: CCCCGCCGTGCTCAAGCGGCACGGGGTACAGGAGTG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATCCCGGGATGCTGTGTaGACCTCGTACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPESRDAV*TSYISG
Trigger: ACCTGAGATGTACGAGGTGCACACAGCATCCCGGGA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGCAGGGCCATCCCACTaGCACCATCCTCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLAGPSH*HHPLRP
Trigger: AGGCCGAAGAGGATGGTGGCAGTGGGATGGCCCTGC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGCAGGGCCATCCCACTaGCACCATCCTCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVAGPSH*HHPLRP
Trigger: AGGCCGAAGAGGATGGTGGCAGTGGGATGGCCCTGC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGTCACGGATGGCATCCTaGAGCAGCCGCTCGCCACGA +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLSRMAS*SSRSPR
Trigger: TCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGA...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPESACCR*SNASSV
Trigger: CACGGAACTGGCATTACTGCAGCGGCAACATGCGCT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPECSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ACAGAGCGAGTAGTGACAGGTAGATCCAGGCGGTCAGTGCCTCGGCTGGGCTGTTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TERVVTGRSRRSVPRLGCYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...ACAGCCCAGCCGAGGCACTGACCGCCTGGATCTACCTGTCACTACTCGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp GGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCTCTCAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: GHCCLAAALRGSPVPASLKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...GAGAGAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCACCTTGTCTCCACCTaGTCAGAACACGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGHLVST*SEHVWD
Trigger: GTCCCAGACGTGTTCTGAGCAGGTGGAGACAAGGTG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTGGAGGGGTACAGCATaGGAGCCATTCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCWRGTA*EPFPSF
Trigger: AAAGGAGGGGAATGGCTCGCATGCTGTACCCCTCCA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGTCGGTCCCGCCGGCTTaGAGGCGACCAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKSVPPA*RRPSPG
Trigger: ACCTGGGCTTGGTCGCCTCCAAGCCGGCGGGACCGA...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313695.11
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTTTAAGGCCTTGCTGTaGCGGCTGCAGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGFKALL*RLQNSE
Trigger: CTCGGAGTTCTGCAGCCGCCACAGCAAGGCCTTAAA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCACCAGGCACTGGGGTTTaGGCCCGAGGGTCCATGCGG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPPGTGV*ARGSMR
Trigger: CCGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGG...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAAGCAGGCAGCCATCGTaGATGAGTTTGCGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQSRQPS*MSLRLR
Trigger: TCTGAGGCGCAAACTCATCCACGATGGCTGCCTGCT...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGAGCGGAAAAGGCCCCTaGGCAGGGTGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKSGKGP*AGWAGP
Trigger: TGGCCCTGCCCACCCTGCCCAGGGGCCTTTTCCGCT...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCCCCATCCCGAGAGTTaGCTCGGCACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLPHPES*LGTASP
Trigger: GGGAGAAGCTGTGCCGAGCCAACTCTCGGGATGGGG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGTAATGCCAGTTCCGTaGCCTGCTTTTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEVMPVP*PAFQGP
Trigger: TGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTAC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTAATGCCAGTTCCGTaGCCTGCTTTTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVMPVP*PAFQGP
Trigger: TGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTCTGGTAAAGTCTCGTaGACTGTGGGGCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGSGKVS*TVGRRQ
Trigger: CTGTCTCCGCCCCACAGTCCACGAGACTTTACCAGA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTCGACATTTGGGGGCTaGTCGACATTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCSTFGG*STFGGK
Trigger: CTTGCCCCCAAATGTCGACCAGCCCCCAAATGTCGA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGGGCTTCCTTGGCTGTaGTGCTCTTGTTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEGLPWL*CSCYRH
Trigger: ATGCCTGTAACAAGAGCATCACAGCCAAGGAAGCCC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGGAGTCTGTGGACTGTaGGAGGATCCGGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPGVCGL*EDPAQP
Trigger: GGGCTGCGCCGGATCCTCTCACAGTCCACAGACTCC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCPPNSR*GFRSWL
Trigger: CAACCATGACCTGAAACCTCAGCGTGAATTTGGGGG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGCCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGPPNSR*GFRSWL
Trigger: CAACCATGACCTGAAACCTCAGCGTGAATTTGGGGG...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGAGAGCTTTAAGGCCTTaGTGTGGCGGCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGRALRP*CGGCRT
Trigger: AGTTCTGCAGCCGCCACAGCAAGGCCTTAAAGCTCT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGAGTCACCAGCAGGATaGACTCCTGTACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLESPAG*TPVPRA
Trigger: GGCACGGGGTACAGGAGTGCATCCTGCTGGTGACTC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGCAGGGCCATCCCACTaGCACCATCCTCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRAGPSH*HHPLRP
Trigger: AGGCCGAAGAGGATGGTGGCAGTGGGATGGCCCTGC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLRRSSS*SSACCR
Trigger: GCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGCGGAGACAGACGGCTaGTACCTTCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRAETDG*YLPPRC
Trigger: GCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGTAGATGGCCGAGCTTaGCCGCTCCCGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLVDGRA*PLPDGC
Trigger: ACAACCATCCGGGAGCGGCCAAGCTCGGCCATCTAC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCTGAGGAAGCGTGTATaGATGTCACTGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCLRKRV*MSLSSS
Trigger: GGACGAGCTCAGTGACATCCATACACGCTTCCTCAG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACGGCGTTCTAATAGCTaGCTGAGGAAGCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQRRSNS*LRKRVW
Trigger: CCATACACGCTTCCTCAGCCAGCTATTAGAACGCCG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTAGGACCTGAGAACTaGCTGATGAGCAGATCACCC +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLLGPEN*LMSRSP
Trigger: GGGTGATCTGCTCATCAGCCAGTTCTCAGGTCCTAG...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTCCAGGCACTGGGGTTTaGGCCCGAGGGTCCATGCGG +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSPGTGV*ARGSMR
Trigger: CCGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGG...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACCAGGCACTGGGGTTTaGGCCCGAGGGTCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLPGTGV*ARGSMR
Trigger: CCGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGCCCTTGCCAGGCACTaGGGTTTGGGCCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSALARH*GLGPRV
Trigger: GACCCTCGGGCCCAAACCCCAGTGCCTGGCAAGGGC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCTCGTACATCTCAGGTaGGGCTGCGCTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCLVHLR*GCADQK
Trigger: TTTCTGATCAGCGCAGCCCCACCTGAGATGTACGAG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGAAGTCCTCCCTGGATaGGCATGTGCGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVEVLPG*ACAHAL
Trigger: CAGAGCGTGCGCACATGCCCATCCAGGGAGGACTTC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGGGGGAAGTCCTCCCTaGATGGGCATGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPGGSPP*MGMCAR
Trigger: GCGTGCGCACATGCCCATCCAGGGAGGACTTCCCCC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACCATCCTCTTCGGCCTaGAAATGGGTCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQPSSSA*KWVISA
Trigger: TGCTGAGATGACCCATTTCCAGGCCGAAGAGGATGG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGTTACCACCGCTGTCTaGTTCCAAGGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLVTTAV*FQGQGW
Trigger: CCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAAC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCCCCATCCCGAGAGTTaGCTCGGCACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRPHPES*LGTASP
Trigger: GGGAGAAGCTGTGCCGAGCCAACTCTCGGGATGGGG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGAAGTCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLKSRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGACTT...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGAAGTCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVKSRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGACTT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCTCTCAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GHCCLAAALRGSPVPASLNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...GAGAGAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTCATGGTTGCTGAGGTaGAAGATGAGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGSWLLR*KMRSGL
Trigger: GAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAATCATGGTTGCTGAGGTaGAAGATGAGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQSWLLR*KMRSGL
Trigger: GAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGTGTATGGATGTCACTaGGCTCGTCCACGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLVYGCH*ARPRRG
Trigger: TCCCCTGCGTGGACGAGCTCAGTGACATCCATACAC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCTCCGCACTAGGACCTaGGAACTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVLRTRT*ELADEQ
Trigger: CTGCTCATCAGCCAGTTCTCAGGTCCTAGTGCGGAG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGGGTCACTTTCCGGATaGATTGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGGSLSG*IAGSVC
Trigger: ACAAACGCTTCCAGCAATTCATCCGGAAAGTGACCC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGCACTAGCACATCTTTaGAGCGCCCCGTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLALAHL*SAPSLS
Trigger: AGACAGCGACGGGGCGCTTCAAAGATGTGCTAGTGC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGCTGCAGCGATACCACTaGAGGCTTGTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLLQRYH*RLVQGR
Trigger: CCTACCCTGGACAAGCCTTCAGTGGTATCGCTGCAG...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTGCGGTGATCTCAGCTaGTTTCCATTTCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGCGDLS*FPFRSL
Trigger: GAGGGATCGAAATGGAAATCAGCTGAGATCACCGCA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAACGAAGAGAAACGGACTaGAAGGCGGTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQRRETD*KAVLFF
Trigger: GAAGAACAACACCGCCTTGCAGTCCGTTTCTCTTCG...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVAAAGS*CPQQDS
Trigger: GGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGC...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAGTGTCCTCACATGGTaGAGCTCTGTCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPESVLTW*SSVWIS
Trigger: GCTAATCCAGACAGAGCTGCACCATGTGAGGACACT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTCAAAGTTCCGGGTGCTaGCAGGGCACAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLQSSGC*QGTGPG
Trigger: GCCAGGCCCTGTGCCCTGGCAGCACCCGGAACTTTG...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTCGATCCCGTGGGAATaGTGCAGGATGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVSIPWE*CRMRLM
Trigger: CATCAGCCGCATCCTGCAGCATTCCCACGGGATCGA...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGGCCAAAGGGGCCCTTaGCAGGCACTGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLGQRGP*QALGFG
Trigger: CCCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTATCACGGATGGCATCCTaGAGCAGCCGCTCGCCACGA +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLSRMAS*SSRSPR
Trigger: TCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGA...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTCTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLLTLQQ*PGLLTL
Trigger: GAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAG...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGAGTCACATTGCAGGTTaGGCAGATGAGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLSHIAG*ADEGFL
Trigger: AAGGAAGCCCTCATCTGCCCAACCTGCAATGTGACT...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTGTCGGAGGGGTAGATaGCCGAGCTTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLCRRGR*PSLAAP
Trigger: GGGAGCGGCCAAGCTCGGCCATCTACCCCTCCGACA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTCCAGGGCACAGGGCCTaGCGTCGGCGTTCTAATAGC +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCPGHRA*RRRSNS
Trigger: GCTATTAGAACGCCGACGCCAGGCCCTGTGCCCTGG...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAAGATCACCCAAGCGATaGATGACAAAGTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQRSPKR*MTKFRV
Trigger: CACCCGGAACTTTGTCATCCATCGCTTGGGTGATCT...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGCTGTGGTCAGGTCCTaGCGCTCCTCCTCGATCCCG +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLAVVRS*RSSSIP
Trigger: CGGGATCGAGGAGGAGCGCCAGGACCTGACCACAGC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATACCCTCGTCCACATTaGACAGCAGCTCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEYPRPH*TAAPSL
Trigger: TAGTGAAGGAGCTGCTGTCCAATGTGGACGAGGGTA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAATACCCTCGTCCACATTaGACAGCAGCTCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQYPRPH*TAAPSL
Trigger: TAGTGAAGGAGCTGCTGTCCAATGTGGACGAGGGTA...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGTACCCTCGTCCACATTaGACAGCAGCTCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLYPRPH*TAAPSL
Trigger: TAGTGAAGGAGCTGCTGTCCAATGTGGACGAGGGTA...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGAAGTCCTCCCTGGATaGGCATGTGCGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLREVLPG*ACAHAL
Trigger: CAGAGCGTGCGCACATGCCCATCCAGGGAGGACTTC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGGGGGAAGTCCTCCCTaGATGGGCATGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLGGSPP*MGMCAR
Trigger: GCGTGCGCACATGCCCATCCAGGGAGGACTTCCCCC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGACAGTGCCCTTCCATaGCCAGCAGCCCCTACAATG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLDSALP*PAAPTM
Trigger: CATTGTAGGGGCTGCTGGCCATGGAAGGGCACTGTC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462460.6
CDS-3UTR TCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGGGGAGACTCATCATTaGAATGTCCAGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGGETHH*NVQQCW
Trigger: CCAACATTGCTGGACATTTCAATGATGAGTCTCCCC...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGGGGAGACTCATCATTaGAATGTCCAGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQGETHH*NVQQCW
Trigger: CCAACATTGCTGGACATTTCAATGATGAGTCTCCCC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCGGAGTCTGTGGACTGTaGGAGGATCCGGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLGVCGL*EDPAQP
Trigger: GGGCTGCGCCGGATCCTCTCACAGTCCACAGACTCC...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGTTCTAATAGCTGGCTaGGGAAGCGTGTATGGATGT +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQVLIAG*GSVYGC
Trigger: ACATCCATACACGCTTCCTCAGCCAGCTATTAGAAC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTTCTAATAGCTGGCTaGGGAAGCGTGTATGGATGT +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCVLIAG*GSVYGC
Trigger: ACATCCATACACGCTTCCTCAGCCAGCTATTAGAAC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTACTTGGTGATGCGCTaGGTCACCAGCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLYLVMR*VTSRMH
Trigger: GTGCATCCTGCTGGTGACTCAGCGCATCACCAAGTA...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGCAGGTGGGGCTGCGCTaGTCAGAAACATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLQVGLR*SETSLS
Trigger: AGAAAGGGATGTTTCTGATCAGCGCAGCCCCACCTG...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGCACGCTCTGCTGAATaGCCCGGATCCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSARSAE*PGSRCS
Trigger: GGAGCACCTGGATCCGGGTCATTCAGCAGAGCGTGC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGCACGCTCTGCTGAATaGCCCGGATCCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLARSAE*PGSRCS
Trigger: GGAGCACCTGGATCCGGGTCATTCAGCAGAGCGTGC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLEVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEEVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGTCCTTTTTATGCTGCTaGAGGAAGCTGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGSFLCC*RKLLST
Trigger: TGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGA...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTCCTTTTTATGCTGCTaGAGGAAGCTGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCSFLCC*RKLLST
Trigger: TGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCAAAGTTCCGGGTGCTaGCAGGGCACAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMQSSGC*QGTGPG
Trigger: GCCAGGCCCTGTGCCCTGGCAGCACCCGGAACTTTG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCCTTGCTGTGGCGGCTaGAGAACTCCGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRPCCGG*RTPSRS
Trigger: AGACCTACTCGGAGTTCTGCAGCCGCCACAGCAAGG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGAGTCACCAGCAGGATaGACTCCTGTACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPESPAG*TPVPRA
Trigger: GGCACGGGGTACAGGAGTGCATCCTGCTGGTGACTC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGATCCCGTGGGAATGCTaGAGGATGCGGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLIPWEC*RMRLMS
Trigger: ACTCATCAGCCGCATCCTGCAGCATTCCCACGGGAT...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGTCGATCCCGTGGGAATaGTGCAGGATGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRSIPWE*CRMRLM
Trigger: CATCAGCCGCATCCTGCAGCATTCCCACGGGATCGA...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGGGCCCGAGGGTCCATaGGGTTGTAGATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKGPEGP*GCRSPA
Trigger: TGCAGGAGATCTACAACCGCATGGACCCTCGGGCCC...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGCAGGGCCATCCCACTaGCACCATCCTCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSAGPSH*HHPLRP
Trigger: AGGCCGAAGAGGATGGTGGCAGTGGGATGGCCCTGC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLSACCR*SNASSV
Trigger: CACGGAACTGGCATTACTGCAGCGGCAACATGCGCT...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVCSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTACAGGGCATCGCCTaGGGGGAGGCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNVQGIA*GEAAPP
Trigger: CGGCGGCGCAGCCTCCCCGCAGGCGATGCCCTGTAC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGCGGAGACAGACGGCTaGTACCTTCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLAETDG*YLPPRC
Trigger: GCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAAAGCAGAGAGACAGTaGCCTTCCATGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLKAERQ*PSMASS
Trigger: GCTGCTGGCCATGGAAGGGCACTGTCTCTCTGCTTT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462460.6
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATATAGCGGGCATCCTTaGCTTCCTTCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEYSGHP*LPSSSP
Trigger: AGGAGAAGATGAAGGAAGCCAAGGATGCCCGCTATA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCATCCTCCTCGATCCCGTaGGAATGCTGCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPSSSIP*ECCRMR
Trigger: CCGCATCCTGCAGCATTCCCACGGGATCGAGGAGGA...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTGCCCTTGCCAGGCACTaGGGTTTGGGCCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLALARH*GLGPRV
Trigger: GACCCTCGGGCCCAAACCCCAGTGCCTGGCAAGGGC...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGAACATCCCTTTCTCCTaGTTGGCAATGTCTCGTACG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGNIPFS*LAMSRT
Trigger: CGTACGAGACATTGCCAACCAGGAGAAAGGGATGTT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAACATCCCTTTCTCCTaGTTGGCAATGTCTCGTACG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPENIPFS*LAMSRT
Trigger: CGTACGAGACATTGCCAACCAGGAGAAAGGGATGTT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGAAGTCCTCCCTGGATaGGCATGTGCGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKEVLPG*ACAHAL
Trigger: CAGAGCGTGCGCACATGCCCATCCAGGGAGGACTTC...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGGGGGAAGTCCTCCCTaGATGGGCATGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMGGSPP*MGMCAR
Trigger: GCGTGCGCACATGCCCATCCAGGGAGGACTTCCCCC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGTTACCACCGCTGTCTaGTTCCAAGGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLVTTAV*FQGQGW
Trigger: CCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAAC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGTAATGCCAGTTCCGTaGCCTGCTTTTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLVMPVP*PAFQGP
Trigger: TGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTAC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAAGTCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPKSRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGACTT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ACAGCCTCCCCGTCGCGGCTCTCCGTCTCCTCCGGGATGTCCTGCATTCTGGTAATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TASPSRLSVSSGMSCILVMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...TACCAGAATGCAGGACATCCCGGAGGAGACGGAGAGCCGCGACGGGGAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp TCAGGGTCACTGCTGTCTTGCAGCCGCTCTTCGGGGCTCCCCAGTTCCTGCCTCAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SGSLLSCSRSSGLPSSCLKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...GAGGCAGGAACTGGGGAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp CCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PPRRMLQGRAVRARTQQLEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...CAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTCGGCCCGCACGCGTTaGTCTCGGGGACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSARTR*SRGQEV
Trigger: GACTTCCTGTCCCCGAGACCAACGCGTGCGGGCCGA...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361247.9
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGGAAGAGGGCCTCCTTaGGGCCTGGGCATCCCGATG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKGRGPP*GLGIPM
Trigger: CATCGGGATGCCCAGGCCCCAAGGAGGCCCTCTTCC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAAGGCAGAGGCCAGTGTaGCCTCACGGGCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLRQRPV*PHGHLV
Trigger: GACAAGGTGCCCGTGAGGCCACACTGGCCTCTGCCT...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR TCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCAAACTGAAATGGTGGTaGAGAGGTGCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCKLKWW*RGAHWY
Trigger: ATACCAATGGGCACCTCTTCACCACCATTTCAGTTT...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGTGTATGGATGTCACTaGGCTCGTCCACGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLVYGCH*ARPRRG
Trigger: TCCCCTGCGTGGACGAGCTCAGTGACATCCATACAC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCGCCTCCTCTTGCGGTaGTCTCAGCTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLRLLLR*SQLISI
Trigger: AATGGAAATCAGCTGAGATCACCGCAAGAGGAGGCG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGCCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLPPNSR*GFRSWL
Trigger: CAACCATGACCTGAAACCTCAGCGTGAATTTGGGGG...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGGCTGCAGCGTTTCCTaGGGTCAATGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLGCSVS*GQWQRT
Trigger: AGTCCTCTGCCATTGACCTCAGGAAACGCTGCAGCC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGCCTACCCGGGTACCTaGATGTCCTTCCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLAYPGT*MSFQLA
Trigger: AGCCAGCTGGAAGGACATTCAGGTACCCGGGTAGGC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAACATAGCACATGGTCATaGCTGAAACTGAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEHSTWS*LKLKWW
Trigger: CCACCATTTCAGTTTCAGGCATGACCATGTGCTATG...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCACCTTGCTGTGGCGGCTaGAGAACTCCGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPPCCGG*RTPSRS
Trigger: AGACCTACTCGGAGTTCTGCAGCCGCCACAGCAAGG...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGAGTCACCAGCAGGATaGACTCCTGTACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLESPAG*TPVPRA
Trigger: GGCACGGGGTACAGGAGTGCATCCTGCTGGTGACTC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTCGATCCCGTGGGAATaGTGCAGGATGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCSIPWE*CRMRLM
Trigger: CATCAGCCGCATCCTGCAGCATTCCCACGGGATCGA...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGGGCCCGAGGGTCCATaGGGTTGTAGATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLGPEGP*GCRSPA
Trigger: TGCAGGAGATCTACAACCGCATGGACCCTCGGGCCC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCATCTCAGGTGGGGCTaGGCTGATCAGAAACATCCC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRHLRWG*ADQKHP
Trigger: GGGATGTTTCTGATCAGCGCAGCCCCACCTGAGATG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACCGGTCATCCCGGGATaGTGTGTGCACCTCGTACAT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLPVIPG*CVHLVH
Trigger: ATGTACGAGGTGCACACAGCATCCCGGGATGACCGG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGCCGGTCATCCCGGGATaGTGTGTGCACCTCGTACAT +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKPVIPG*CVHLVH
Trigger: ATGTACGAGGTGCACACAGCATCCCGGGATGACCGG...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGCCCGGTCCTTCTGCTaGAACTCCATCTTAATTCGC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLARSFC*NSILIR
Trigger: GCGAATTAAGATGGAGTTGCAGCAGAAGGACCGGGC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCTCACGGATGGCATCCTaGAGCAGCCGCTCGCCACGA +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLSRMAS*SSRSPR
Trigger: TCGTGGCGAGCGGCTGCTGCAGGATGCCATCCGTGA...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGCCAGTTCCGTGGCCTaGTTTTCAGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMASSVA*FSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLRRSSS*SSACCR
Trigger: GCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCTGAGGAAGCGTGTATaGATGTCACTGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVLRKRV*MSLSSS
Trigger: GGACGAGCTCAGTGACATCCATACACGCTTCCTCAG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGCGGCGTTCTAATAGCTaGCTGAGGAAGCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLRRSNS*LRKRVW
Trigger: CCATACACGCTTCCTCAGCCAGCTATTAGAACGCCG...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACTAGCCCCAGTGCTGTaGTCAGGTCCTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKLAPVL*SGPGAP
Trigger: AGGAGCGCCAGGACCTGACCACAGCACTGGGGCTAG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGTTACCACCGCTGTCTaGTTCCAAGGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSVTTAV*FQGQGW
Trigger: CCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAAC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGGCCTCAGCTGGGAGTaGCTCGGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNGLSWE*LGLAQG
Trigger: GCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RAVGCCGCSLSSKTDVAGMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...CCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ACAGAGCGAGTAGTGACAGGTAGATCCAGGCGGTCAGTGCCTCGGCTGGGCTGTGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: TERVVTGRSRRSVPRLGCEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...ACAGCCCAGCCGAGGCACTGACCGCCTGGATCTACCTGTCACTACTCGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR CCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAAAAATTCTTCGACATTTaGGGGCTGGTCGACATTTGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPEKFFDI*GLVDIW
Trigger: CCAAATGTCGACCAGCCCCCAAATGTCGAAGAATTT...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGACTCCAAGAGTCAGCTGCAAAGTCCTTCTCATCCATCTCAAAGTCACTCATCGGAGTCTGTGGACTGTaGGAGGATCCGGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLQESAAKSFSSISKSLIGVCGL*EDPAQP
Trigger: GGGCTGCGCCGGATCCTCTCACAGTCCACAGACTCC...GATGAGTGACTTTGAGATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTATTCGGTTCCGCATGTTaGGGGAGTCTGTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLFGSAC*GSLWTV
Trigger: CACAGTCCACAGACTCCCTCAACATGCGGAACCGAA...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCATACTTGGTGATGCGCTaGGTCACCAGCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPYLVMR*VTSRMH
Trigger: GTGCATCCTGCTGGTGACTCAGCGCATCACCAAGTA...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTACTTGGTGATGCGCTaGGTCACCAGCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCYLVMR*VTSRMH
Trigger: GTGCATCCTGCTGGTGACTCAGCGCATCACCAAGTA...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTCTGCAGCGATACCACTaGAGGCTTGTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLLQRYH*RLVQGR
Trigger: CCTACCCTGGACAAGCCTTCAGTGGTATCGCTGCAG...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTCAGGTGGGGCTGCGCTaGTCAGAAACATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCQVGLR*SETSLS
Trigger: AGAAAGGGATGTTTCTGATCAGCGCAGCCCCACCTG...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGTTCAATGGAGCCATTaGAGGTTCTGGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLVQWSH*RFWPHH
Trigger: ATGGTGAGGCCAGAACCTTCAATGGCTCCATTGAAC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGTTCAATGGAGCCATTaGAGGTTCTGGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLVQWSH*RFWPHH
Trigger: ATGGTGAGGCCAGAACCTTCAATGGCTCCATTGAAC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCGCCTCCTCTTGCGGTaGTCTCAGCTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRRLLLR*SQLISI
Trigger: AATGGAAATCAGCTGAGATCACCGCAAGAGGAGGCG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGCCCCGTTACTGCAGATaGAGGCAGAAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLPRYCR*RQKSFS
Trigger: AGAGAATGACTTCTGCCTTCATCTGCAGTAACGGGG...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGGTCCAAGAGACAGTTaGTGCCACTCACGGGTACAG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKGPRDS*CHSRVQ
Trigger: CTGTACCCGTGAGTGGCATCAACTGTCTCTTGGACC...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACCTTGCTGTGGCGGCTaGAGAACTCCGAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLPCCGG*RTPSRS
Trigger: AGACCTACTCGGAGTTCTGCAGCCGCCACAGCAAGG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCACTCCTGTACCCCGTaGCGCTTGAGCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNHSCTP*RLSTAG
Trigger: CCCCGCCGTGCTCAAGCGGCACGGGGTACAGGAGTG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGAGTCACCAGCAGGATaGACTCCTGTACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMESPAG*TPVPRA
Trigger: GGCACGGGGTACAGGAGTGCATCCTGCTGGTGACTC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTATCCCGTGGGAATGCTaGAGGATGCGGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCIPWEC*RMRLMS
Trigger: ACTCATCAGCCGCATCCTGCAGCATTCCCACGGGAT...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGCATCTCAGGTGGGGCTaGGCTGATCAGAAACATCCC +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKHLRWG*ADQKHP
Trigger: GGGATGTTTCTGATCAGCGCAGCCCCACCTGAGATG...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTATCCCGGGATGCTGTGTaGACCTCGTACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLSRDAV*TSYISG
Trigger: ACCTGAGATGTACGAGGTGCACACAGCATCCCGGGA...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACCGGTCATCCCGGGATaGTGTGTGCACCTCGTACAT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLPVIPG*CVHLVH
Trigger: ATGTACGAGGTGCACACAGCATCCCGGGATGACCGG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCAGCAGCTCCACCAGTaGCCGGTCCTTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMQQLHQ*PVLLLQ
Trigger: TTGCAGCAGAAGGACCGGGCACTGGTGGAGCTGCTG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPSACCR*SNASSV
Trigger: CACGGAACTGGCATTACTGCAGCGGCAACATGCGCT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGTACAGGGCATCGCCTaGGGGGAGGCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLVQGIA*GEAAPP
Trigger: CGGCGGCGCAGCCTCCCCGCAGGCGATGCCCTGTAC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGATCCAGGCGGTCAGTaGCTCGGCTGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLDPGGQ*LGWAVG
Trigger: CCCCACAGCCCAGCCGAGGCACTGACCGCCTGGATC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGCCTGGGCATCCCGATaGTTGCAGTCTCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPAWASR*LQSPRI
Trigger: AATACGAGGAGACTGCAAGCATCGGGATGCCCAGGC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGAGATCACCCAAGCGATaGATGACAAAGTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVRSPKR*MTKFRV
Trigger: CACCCGGAACTTTGTCATCCATCGCTTGGGTGATCT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCTAGGACCTGAGAACTaGCTGATGAGCAGATCACCC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRLGPEN*LMSRSP
Trigger: GGGTGATCTGCTCATCAGCCAGTTCTCAGGTCCTAG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATCCTCCTCGATCCCGTaGGAATGCTGCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPSSSIP*ECCRMR
Trigger: CCGCATCCTGCAGCATTCCCACGGGATCGAGGAGGA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAGCAGGCAGCCATCGTaGATGAGTTTGCGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLSRQPS*MSLRLR
Trigger: TCTGAGGCGCAAACTCATCCACGATGGCTGCCTGCT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGCCATCCTCTTCGGCCTaGAAATGGGTCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRPSSSA*KWVISA
Trigger: TGCTGAGATGACCCATTTCCAGGCCGAAGAGGATGG...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATAGCGGAAAAGGCCCCTaGGCAGGGTGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNSGKGP*AGWAGP
Trigger: TGGCCCTGCCCACCCTGCCCAGGGGCCTTTTCCGCT...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANGSGSV*PRAASC
Trigger: GCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGTCTGGTAAAGTCTCGTaGACTGTGGGGCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKSGKVS*TVGRRQ
Trigger: CTGTCTCCGCCCCACAGTCCACGAGACTTTACCAGA...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAGCCTCTCCTCCAAGACGGATGTTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: YLKGSRVLWLQPLLQDGCSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...ACATCCGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTACTGCCCTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGTGGATGAGCCTGAATTGTTTCTAAATGGCTaGGGAAGAGGTCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLGQEPSSCVDEPELFLNG*GRGQYR
Trigger: CCTATACTGACCTCTTCCCCAGCCATTTAGAAACAA...TTCAGGCTCATCCACGCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCAAAGGGCCAGCAGATaGATGACAGGAATCCTGATC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLQRASR*MTGILI
Trigger: GATCAGGATTCCTGTCATCCATCTGCTGGCCCTTTG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACTTTGTTTTCGGCCGTaGGCCCGGAAAGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKLCFRP*ARKAPD
Trigger: GTCAGGGGCTTTCCGGGCCCACGGCCGAAAACAAAG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAATCTCCTCGTATTCAGTaGGCCCTCGAGCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKSPRIQ*ALELPA
Trigger: GGCAGGGAGCTCGAGGGCCCACTGAATACGAGGAGA...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673475.1
3UTR CAA 72 bp CATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTaGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLWCSFRMSQGV*WPNSPSFLNGP
Trigger: GGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCGGTTCCGCATGTTaGGGGAGTCTGTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSFGSAC*GSLWTV
Trigger: CACAGTCCACAGACTCCCTCAACATGCGGAACCGAA...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGGCAGCCATCGTGGATaGGTTTGCGCCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSGSHRG*VCASEV
Trigger: AACTTCTGAGGCGCAAACTCATCCACGATGGCTGCC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCTGCAGCGATACCACTaGAGGCTTGTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMLQRYH*RLVQGR
Trigger: CCTACCCTGGACAAGCCTTCAGTGGTATCGCTGCAG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACTGCAGCGATACCACTaGAGGCTTGTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKLQRYH*RLVQGR
Trigger: CCTACCCTGGACAAGCCTTCAGTGGTATCGCTGCAG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGTGCGGTGATCTCAGCTaGTTTCCATTTCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRCGDLS*FPFRSL
Trigger: GAGGGATCGAAATGGAAATCAGCTGAGATCACCGCA...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCACTCCCAGGGCTTCCATaGAGGACGGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPLPGLP*RTEKGR
Trigger: TCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGGAG...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCTCCCAGGGCTTCCATaGAGGACGGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMLPGLP*RTEKGR
Trigger: TCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGGAG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCCTCCCAGGGCTTCCATaGAGGACGGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLLPGLP*RTEKGR
Trigger: TCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGGAG...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GACATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: DILLLHHLLFMLLQEAAVAAAGS*CPQQDS
Trigger: GGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGC...GACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGACTTTCCGGATGAATTaGTGGAAGCGTTTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVTFRMN*WKRLSR
Trigger: CCGAGACAAACGCTTCCAGCAATTCATCCGGAAAGT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTCACTCCTGTACCCCGTaGCGCTTGAGCACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGHSCTP*RLSTAG
Trigger: CCCCGCCGTGCTCAAGCGGCACGGGGTACAGGAGTG...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGGCCAAAGGGGCCCTTaGCAGGCACTGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLGQRGP*QALGFG
Trigger: CCCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCGTACGATTAGATTCTaGAGCGATACCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLRTIRF*SDTTEG
Trigger: GCCTTCAGTGGTATCGCTGCAGAATCTAATCGTACG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAGTGCCCGGTCCTTCTaGTGCAACTCCATCTTAATT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLSARSF*CNSILI
Trigger: AATTAAGATGGAGTTGCAGCAGAAGGACCGGGCACT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTATGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLCSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLCSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNRRSSS*SSACCR
Trigger: GCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCCGGGCCTCCAGGCTaGCAGCTTCGGTTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFAGPPG*QLRLPV
Trigger: AACGGGCAACCGAAGCTGGCAGCCTGGAGGCCCGGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGAGGATCCACAGGTCTaGGGGCCCAGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGEDPQV*GPRGPQ
Trigger: CTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CGGTCCTCAAAGTTTCGATGGACAGAGCGAGTAGTGACAGGTAGATCCAGGCGGCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RSSKFRWTERVVTGRSRRQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...CCGCCTGGATCTACCTGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368315.8
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGTATAGCGGGCATCCTTaGCTTCCTTCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLYSGHP*LPSSSP
Trigger: AGGAGAAGATGAAGGAAGCCAAGGATGCCCGCTATA...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATGTCGGAGGGGTAGATaGCCGAGCTTGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLCRRGR*PSLAAP
Trigger: GGGAGCGGCCAAGCTCGGCCATCTACCCCTCCGACA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCCCTTGCCAGGCACTaGGGTTTGGGCCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFALARH*GLGPRV
Trigger: GACCCTCGGGCCCAAACCCCAGTGCCTGGCAAGGGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTAGCAGGCAGCCATCGTaGATGAGTTTGCGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLSRQPS*MSLRLR
Trigger: TCTGAGGCGCAAACTCATCCACGATGGCTGCCTGCT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACTCGTACATCTCAGGTaGGGCTGCGCTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLLVHLR*GCADQK
Trigger: TTTCTGATCAGCGCAGCCCCACCTGAGATGTACGAG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCACCATCCTCTTCGGCCTaGAAATGGGTCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPPSSSA*KWVISA
Trigger: TGCTGAGATGACCCATTTCCAGGCCGAAGAGGATGG...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAGCGGAAAAGGCCCCTaGGCAGGGTGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFSGKGP*AGWAGP
Trigger: TGGCCCTGCCCACCCTGCCCAGGGGCCTTTTCCGCT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGTAATGCCAGTTCCGTaGCCTGCTTTTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSVMPVP*PAFQGP
Trigger: TGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTAC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANPGGLS*EWLGLA
Trigger: GGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGG...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTATCATGGTTGCTGAGGTaGAAGATGAGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLSWLLR*KMRSGL
Trigger: GAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTATCGACATTTGGGGGCTaGTCGACATTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLSTFGG*STFGGK
Trigger: CTTGCCCCCAAATGTCGACCAGCCCCCAAATGTCGA...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATGGAAAGCATGCCAGTaGCCGAGTGGTCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPWKACQ*PSGPKG
Trigger: GCCCTTTGGACCACTCGGCCACTGGCATGCTTTCCA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTGAATGTCCTTCCAGCTaGCTGCAGCGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLECPSS*LQRFLR
Trigger: CCTCAGGAAACGCTGCAGCCAGCTGGAAGGACATTC...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGGGAGACTCATCATTaGAATGTCCAGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRGETHH*NVQQCW
Trigger: CCAACATTGCTGGACATTTCAATGATGAGTCTCCCC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCGGTTCCGCATGTTaGGGGAGTCTGTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMFGSAC*GSLWTV
Trigger: CACAGTCCACAGACTCCCTCAACATGCGGAACCGAA...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCCATTCGGTTCCGCATGTTaGGGGAGTCTGTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: HLAASSPPFYAAAGSCCPFGSAC*GSLWTV
Trigger: CACAGTCCACAGACTCCCTCAACATGCGGAACCGAA...TGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR TCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCTCCGCACTAGGACCTaGGAACTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLLRTRT*ELADEQ
Trigger: CTGCTCATCAGCCAGTTCTCAGGTCCTAGTGCGGAG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGGGTCACTTTCCGGATaGATTGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPGSLSG*IAGSVC
Trigger: ACAAACGCTTCCAGCAATTCATCCGGAAAGTGACCC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGGCAGCCATCGTGGATaGGTTTGCGCCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMGSHRG*VCASEV
Trigger: AACTTCTGAGGCGCAAACTCATCCACGATGGCTGCC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTGCACTAGCACATCTTTaGAGCGCCCCGTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLALAHL*SAPSLS
Trigger: AGACAGCGACGGGGCGCTTCAAAGATGTGCTAGTGC...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCACAGGTGGGGCTGCGCTaGTCAGAAACATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPQVGLR*SETSLS
Trigger: AGAAAGGGATGTTTCTGATCAGCGCAGCCCCACCTG...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGTTCAATGGAGCCATTaGAGGTTCTGGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPVQWSH*RFWPHH
Trigger: ATGGTGAGGCCAGAACCTTCAATGGCTCCATTGAAC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTATGCGGTGATCTCAGCTaGTTTCCATTTCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLCGDLS*FPFRSL
Trigger: GAGGGATCGAAATGGAAATCAGCTGAGATCACCGCA...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLREVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCACCCCGTTACTGCAGATaGAGGCAGAAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPPRYCR*RQKSFS
Trigger: AGAGAATGACTTCTGCCTTCATCTGCAGTAACGGGG...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACCCCGTTACTGCAGATaGAGGCAGAAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLPRYCR*RQKSFS
Trigger: AGAGAATGACTTCTGCCTTCATCTGCAGTAACGGGG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCACCTCTGCTTCGTCAATaGGGGATTCCACGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPPLLRQ*GIPRIG
Trigger: CCCTATCCGTGGAATCCCTCATTGACGAAGCAGAGG...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGAGGGTTCTAGAACTCTaGAACCTTGGGACTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLRVLEL*NLGTRS
Trigger: ACTTCTAGTCCCAAGGTTTCAGAGTTCTAGAACCCT...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR GCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGCATAGCACATGGTCATaGCTGAAACTGAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVHSTWS*LKLKWW
Trigger: CCACCATTTCAGTTTCAGGCATGACCATGTGCTATG...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGTGGCTGCATAGCACATGGTCATaGCTGAAACTGAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: MALPTALLYLKGSRVLWLHSTWS*LKLKWW
Trigger: CCACCATTTCAGTTTCAGGCATGACCATGTGCTATG...CAGCCACAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAGGGCCGCTTTCTGTTaGTTCTGCTTGACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPRAAFC*FCLTLV
Trigger: TACCAAGGTCAAGCAGAAGCAACAGAAAGCGGCCCT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGAGCCCAGGAGGGACTaGCGGAAGCTGTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANEPRRD*RKLSEG
Trigger: CCCCTCCGACAGCTTCCGGCAGTCCCTCCTGGGCTC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAAGTGTCCTCACATGGTaGAGCTCTGTCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPSVLTW*SSVWIS
Trigger: GCTAATCCAGACAGAGCTGCACCATGTGAGGACACT...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTAGAGCTTTAAGGCCTTaGTGTGGCGGCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLRALRP*CGGCRT
Trigger: AGTTCTGCAGCCGCCACAGCAAGGCCTTAAAGCTCT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTAGAGCTTTAAGGCCTTaGTGTGGCGGCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSRALRP*CGGCRT
Trigger: AGTTCTGCAGCCGCCACAGCAAGGCCTTAAAGCTCT...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCGATCCCGTGGGAATaGTGCAGGATGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSIPWE*CRMRLM
Trigger: CATCAGCCGCATCCTGCAGCATTCCCACGGGATCGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCATCTCAGGTGGGGCTaGGCTGATCAGAAACATCCC +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMHLRWG*ADQKHP
Trigger: GGGATGTTTCTGATCAGCGCAGCCCCACCTGAGATG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACATCTCAGGTGGGGCTaGGCTGATCAGAAACATCCC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKHLRWG*ADQKHP
Trigger: GGGATGTTTCTGATCAGCGCAGCCCCACCTGAGATG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGCCCGGTCCTTCTGCTaGAACTCCATCTTAATTCGC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLARSFC*NSILIR
Trigger: GCGAATTAAGATGGAGTTGCAGCAGAAGGACCGGGC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKSACCR*SNASSV
Trigger: CACGGAACTGGCATTACTGCAGCGGCAACATGCGCT...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFRRSSS*SSACCR
Trigger: GCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCG...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTAGCAGTGCCCGGGCCTaGTCACTCTCCCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSSSARA*SLSRSR
Trigger: CCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCT...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCCAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGCGGAGACAGACGGCTaGTACCTTCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNAETDG*YLPPRC
Trigger: GCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAGATCACCCAAGCGATaGATGACAAAGTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLRSPKR*MTKFRV
Trigger: CACCCGGAACTTTGTCATCCATCGCTTGGGTGATCT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTTAAGGCCTTGCTGTaGCGGCTGCAGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMFKALL*RLQNSE
Trigger: CTCGGAGTTCTGCAGCCGCCACAGCAAGGCCTTAAA...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCTGTGGTCAGGTCCTaGCGCTCCTCCTCGATCCCG +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFAVVRS*RSSSIP
Trigger: CGGGATCGAGGAGGAGCGCCAGGACCTGACCACAGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTACTAGCCCCAGTGCTGTaGTCAGGTCCTGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLLAPVL*SGPGAP
Trigger: AGGAGCGCCAGGACCTGACCACAGCACTGGGGCTAG...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCAGCAGGCAGCCATCGTaGATGAGTTTGCGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLSRQPS*MSLRLR
Trigger: TCTGAGGCGCAAACTCATCCACGATGGCTGCCTGCT...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTCCCTTTCTCCTGGTTaGCAATGTCTCGTACGATTA +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVSLSPG*QCLVRL
Trigger: TAATCGTACGAGACATTGCCAACCAGGAGAAAGGGA...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTCTCGTACATCTCAGGTaGGGCTGCGCTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSLVHLR*GCADQK
Trigger: TTTCTGATCAGCGCAGCCCCACCTGAGATGTACGAG...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCCTCCACCTCACGGATaGCATCCTGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNPPPHG*HPAAAA
Trigger: AGCGGCTGCTGCAGGATGCCATCCGTGAGGTGGAGG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTACCTCCACCTCACGGATaGCATCCTGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLPPPHG*HPAAAA
Trigger: AGCGGCTGCTGCAGGATGCCATCCGTGAGGTGGAGG...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGTAATGCCAGTTCCGTaGCCTGCTTTTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMVMPVP*PAFQGP
Trigger: TGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTAC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGGCCTCAGCTGGGAGTaGCTCGGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSGLSWE*LGLAQG
Trigger: GCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATCTGGTAAAGTCTCGTaGACTGTGGGGCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPSGKVS*TVGRRQ
Trigger: CTGTCTCCGCCCCACAGTCCACGAGACTTTACCAGA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp GAAGGCATGAACCACTGGCATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EGMNHWHLWCSFRMSQGVMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...CACCCCCTGGGACATCCGAAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTCATGGTTGCTGAGGTaGAAGATGAGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSSWLLR*KMRSGL
Trigger: GAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAATCGACATTTGGGGGCTaGTCGACATTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKSTFGG*STFGGK
Trigger: CTTGCCCCCAAATGTCGACCAGCCCCCAAATGTCGA...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTGGAAAGCATGCCAGTaGCCGAGTGGTCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLWKACQ*PSGPKG
Trigger: GCCCTTTGGACCACTCGGCCACTGGCATGCTTTCCA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCACCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSPRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGGTGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470541.6
CDS-3UTR TCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTGGGTCACTTTCCGGATaGATTGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSGSLSG*IAGSVC
Trigger: ACAAACGCTTCCAGCAATTCATCCGGAAAGTGACCC...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCACGCTCTGCTGAATaGCCCGGATCCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFARSAE*PGSRCS
Trigger: GGAGCACCTGGATCCGGGTCATTCAGCAGAGCGTGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGTTCAATGGAGCCATTaGAGGTTCTGGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLVQWSH*RFWPHH
Trigger: ATGGTGAGGCCAGAACCTTCAATGGCTCCATTGAAC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTATGCGGTGATCTCAGCTaGTTTCCATTTCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLCGDLS*FPFRSL
Trigger: GAGGGATCGAAATGGAAATCAGCTGAGATCACCGCA...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCACGCCTCCTCTTGCGGTaGTCTCAGCTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPRLLLR*SQLISI
Trigger: AATGGAAATCAGCTGAGATCACCGCAAGAGGAGGCG...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLEVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKPPNSR*GFRSWL
Trigger: CAACCATGACCTGAAACCTCAGCGTGAATTTGGGGG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGCCCCCAAATTCACGCTaGGGTTTCAGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMPPNSR*GFRSWL
Trigger: CAACCATGACCTGAAACCTCAGCGTGAATTTGGGGG...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACGAAGAGAAACGGACTaGAAGGCGGTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLRRETD*KAVLFF
Trigger: GAAGAACAACACCGCCTTGCAGTCCGTTTCTCTTCG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRTPRVS*KVLLIH
Trigger: ATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGT...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTAGTGTCCTCACATGGTaGAGCTCTGTCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSSVLTW*SSVWIS
Trigger: GCTAATCCAGACAGAGCTGCACCATGTGAGGACACT...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGGCCAAAGGGGCCCTTaGCAGGCACTGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLGQRGP*QALGFG
Trigger: CCCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTACGTACGATTAGATTCTaGAGCGATACCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLRTIRF*SDTTEG
Trigger: GCCTTCAGTGGTATCGCTGCAGAATCTAATCGTACG...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCCCGGGATGCTGTGTaGACCTCGTACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSRDAV*TSYISG
Trigger: ACCTGAGATGTACGAGGTGCACACAGCATCCCGGGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGCCCGGTCCTTCTGCTaGAACTCCATCTTAATTCGC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKARSFC*NSILIR
Trigger: GCGAATTAAGATGGAGTTGCAGCAGAAGGACCGGGC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAGTGCCCGGTCCTTCTaGTGCAACTCCATCTTAATT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLSARSF*CNSILI
Trigger: AATTAAGATGGAGTTGCAGCAGAAGGACCGGGCACT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCAGTGTCAGGGTCACTaGTGTCTTGCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLQCQGH*CLAAAL
Trigger: AAGAGCGGCTGCAAGACAGCAGTGACCCTGACACTG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTACAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTAGGGTGCTGTGGCTaGAGCCTCTCCTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNVGCCG*SLSSKT
Trigger: CGTCTTGGAGGAGAGGCTGCAGCCACAGCACCCTAC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCTGCAGCCTCTCCTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGCTTCGATCTCTAATTaGCTACGATCTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: WLQPLLQDGCCRGGPLGQASISN*LRSLKN
Trigger: ATTTTTAAGAGATCGTAGGCAATTAGAGATCGAAGC...TTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAGGAGAGGCTGCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGGCCCTCGAGCTCCCTaGCAGGCCCCCAACTATGTC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLGPRAP*QAPNYV
Trigger: GACATAGTTGGGGGCCTGGCAGGGAGCTCGAGGGCC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAACTGAGGAAGCGTGTATaGATGTCACTGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKLRKRV*MSLSSS
Trigger: GGACGAGCTCAGTGACATCCATACACGCTTCCTCAG...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTTTAAGGCCTTGCTGTaGCGGCTGCAGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLFKALL*RLQNSE
Trigger: CTCGGAGTTCTGCAGCCGCCACAGCAAGGCCTTAAA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATTCCGGATGAATTGCTaGAAGCGTTTGTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPFRMNC*KRLSRA
Trigger: CGCCCGAGACAAACGCTTCCAGCAATTCATCCGGAA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGCCCTTGCCAGGCACTaGGGTTTGGGCCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSALARH*GLGPRV
Trigger: GACCCTCGGGCCCAAACCCCAGTGCCTGGCAAGGGC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGAAGTCCTCCCTGGATaGGCATGTGCGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLEVLPG*ACAHAL
Trigger: CAGAGCGTGCGCACATGCCCATCCAGGGAGGACTTC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCTTCGGCCTGGAAATaGGTCATCTCAGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLSSAWK*VISANS
Trigger: GCTGTTTGCTGAGATGACCCATTTCCAGGCCGAAGA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCCTTTTCCCGGGTCTTaGCCTTTCCGGTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNPFPGS*PFRSCP
Trigger: CGGGCATGACCGGAAAGGCCAAGACCCGGGAAAAGG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCCACTTACCTCTTCGTCAATaGGGGATTCCACGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ILLLHHLLFMLLQEAAVHLPLRQ*GIPRIG
Trigger: CCCTATCCGTGGAATCCCTCATTGACGAAGAGGTAA...GTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR TCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGATTAGCTCATAGATaGCATCTTGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRGLAHR*HLAASS
Trigger: TGATGAAGCAGCAAGATGTCATCTATGAGCTAATCC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAGTTCTAATAGCTGGCTaGGGAAGCGTGTATGGATGT +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLVLIAG*GSVYGC
Trigger: ACATCCATACACGCTTCCTCAGCCAGCTATTAGAAC...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAGGGTCACTTTCCGGATaGATTGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPGSLSG*IAGSVC
Trigger: ACAAACGCTTCCAGCAATTCATCCGGAAAGTGACCC...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGCACTAGCACATCTTTaGAGCGCCCCGTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNALAHL*SAPSLS
Trigger: AGACAGCGACGGGGCGCTTCAAAGATGTGCTAGTGC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCGCCTCCTCTTGCGGTaGTCTCAGCTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLRLLLR*SQLISI
Trigger: AATGGAAATCAGCTGAGATCACCGCAAGAGGAGGCG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCCCCCGTTACTGCAGATaGAGGCAGAAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLPRYCR*RQKSFS
Trigger: AGAGAATGACTTCTGCCTTCATCTGCAGTAACGGGG...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCGATCCGCGCCCGCGTaGGGGATTCGATCCGAGACA +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSRSAPA*GIRSET
Trigger: TGTCTCGGATCGAATCCCTCACGCGGGCGCGGATCG...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361247.9
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGGCTGCAGCGTTTCCTaGGGTCAATGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNGCSVS*GQWQRT
Trigger: AGTCCTCTGCCATTGACCTCAGGAAACGCTGCAGCC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCCACCGAAGAGAAACGGACTaGAAGGCGGTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ILLLHHLLFMLLQEAAVHRRETD*KAVLFF
Trigger: GAAGAACAACACCGCCTTGCAGTCCGTTTCTCTTCG...GTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNAAAGS*CPQQDS
Trigger: GGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCAAAGTTCCGGGTGCTaGCAGGGCACAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSQSSGC*QGTGPG
Trigger: GCCAGGCCCTGTGCCCTGGCAGCACCCGGAACTTTG...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTACTTTCCGGATGAATTaGTGGAAGCGTTTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLTFRMN*WKRLSR
Trigger: CCGAGACAAACGCTTCCAGCAATTCATCCGGAAAGT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGGGCCCGAGGGTCCATaGGGTTGTAGATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFGPEGP*GCRSPA
Trigger: TGCAGGAGATCTACAACCGCATGGACCCTCGGGCCC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGGCCAAAGGGGCCCTTaGCAGGCACTGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSGQRGP*QALGFG
Trigger: CCCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTAGTGCCCGGTCCTTCTaGTGCAACTCCATCTTAATT +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLSARSF*CNSILI
Trigger: AATTAAGATGGAGTTGCAGCAGAAGGACCGGGCACT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTCAGCAGCTCCACCAGTaGCCGGTCCTTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGQQLHQ*PVLLLQ
Trigger: TTGCAGCAGAAGGACCGGGCACTGGTGGAGCTGCTG...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSLTLQQ*PGLLTL
Trigger: GAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAG...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGGGTCACTGCTGTCTTaGAGCCGCTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLGSLLS*SRSSGL
Trigger: GAGCCCCGAAGAGCGGCTGCAAGACAGCAGTGACCC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGCGGAGACAGACGGCTaGTACCTTCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANAETDG*YLPPRC
Trigger: GCAGCGAGGAGGAAGGTAGCAGCCGTCTGTCTCCGC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGAGTCACATTGCAGGTTaGGCAGATGAGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSHIAG*ADEGFL
Trigger: AAGGAAGCCCTCATCTGCCCAACCTGCAATGTGACT...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGTAGATGGCCGAGCTTaGCCGCTCCCGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFVDGRA*PLPDGC
Trigger: ACAACCATCCGGGAGCGGCCAAGCTCGGCCATCTAC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCTGAGGAAGCGTGTATaGATGTCACTGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLLRKRV*MSLSSS
Trigger: GGACGAGCTCAGTGACATCCATACACGCTTCCTCAG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGATCACCCAAGCGATaGATGACAAAGTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPRSPKR*MTKFRV
Trigger: CACCCGGAACTTTGTCATCCATCGCTTGGGTGATCT...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGCTGTGGTCAGGTCCTaGCGCTCCTCCTCGATCCCG +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSAVVRS*RSSSIP
Trigger: CGGGATCGAGGAGGAGCGCCAGGACCTGACCACAGC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAATACCCTCGTCCACATTaGACAGCAGCTCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKYPRPH*TAAPSL
Trigger: TAGTGAAGGAGCTGCTGTCCAATGTGGACGAGGGTA...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCATCCCTTTCTCCTGGTTaGCAATGTCTCGTACGATTA +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPSLSPG*QCLVRL
Trigger: TAATCGTACGAGACATTGCCAACCAGGAGAAAGGGA...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCCACCCCTCAACTTCTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAAACATCCCTTTCTCCTaGTTGGCAATGTCTCGTACG +
Preference number: 4 (lower is better)
Translates to: SPTPQLLQRCGDRRLRSLNIPFS*LAMSRT
Trigger: CGTACGAGACATTGCCAACCAGGAGAAAGGGATGTT...TAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAGAAGTTGAGGGGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCTCGTACATCTCAGGTaGGGCTGCGCTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLLVHLR*GCADQK
Trigger: TTTCTGATCAGCGCAGCCCCACCTGAGATGTACGAG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGGGGGAAGTCCTCCCTaGATGGGCATGTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSGGSPP*MGMCAR
Trigger: GCGTGCGCACATGCCCATCCAGGGAGGACTTCCCCC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAATCTTCGGCCTGGAAATaGGTCATCTCAGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKSSAWK*VISANS
Trigger: GCTGTTTGCTGAGATGACCCATTTCCAGGCCGAAGA...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATCCTCCACCTCACGGATaGCATCCTGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANPPPHG*HPAAAA
Trigger: AGCGGCTGCTGCAGGATGCCATCCGTGAGGTGGAGG...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: SPSFLNGPRYPRIPRAGKSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...CTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAAGTCTCGTGGACTGTaGGGCGGAGACAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFKSRGL*GGDRRL
Trigger: CAGCCGTCTGTCTCCGCCCCACAGTCCACGAGACTT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGAGGAGAAAGGGACATaGCCCTGCCCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANEEKGT*PCPQPS
Trigger: GGAGGGCTGTGGGCAGGGCCATGTCCCTTTCTCCTC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGTTGTTTCTAAATGGCTaGGGAAGAGGTCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRLFLNG*GRGQYR
Trigger: CCTATACTGACCTCTTCCCCAGCCATTTAGAAACAA...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCCAGGGCTTCCATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGAACTTGTTTCTAAATaGCTGGGGAAGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PRASMKDGERENSSKRLRELVSK*LGKRSV
Trigger: TACTGACCTCTTCCCCAGCCATTTAGAAACAAGTTC...CCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAAAATTCTTCGACATTTaGGGGCTGGTCGACATTTGG +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLKFFDI*GLVDIW
Trigger: CCAAATGTCGACCAGCCCCCAAATGTCGAAGAATTT...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGGATTAGCTCATAGATaGCATCTTGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLGLAHR*HLAASS
Trigger: TGATGAAGCAGCAAGATGTCATCTATGAGCTAATCC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGGCAGCCATCGTGGATaGGTTTGCGCCTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNGSHRG*VCASEV
Trigger: AACTTCTGAGGCGCAAACTCATCCACGATGGCTGCC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGCACTAGCACATCTTTaGAGCGCCCCGTCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGALAHL*SAPSLS
Trigger: AGACAGCGACGGGGCGCTTCAAAGATGTGCTAGTGC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMEVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAAGGACAAGGCCCTCTaGTCCCTATGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLKDKAL*SLWLGS
Trigger: GGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCCCCGTTACTGCAGATaGAGGCAGAAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLPRYCR*RQKSFS
Trigger: AGAGAATGACTTCTGCCTTCATCTGCAGTAACGGGG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCCTCTGCTTCGTCAATaGGGGATTCCACGGATAGGG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNPLLRQ*GIPRIG
Trigger: CCCTATCCGTGGAATCCCTCATTGACGAAGCAGAGG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLTPRVS*KVLLIH
Trigger: ATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGT...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSTPRVS*KVLLIH
Trigger: ATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGT...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCCACTCCTTTTTATGCTGCTaGAGGAAGCTGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ILLLHHLLFMLLQEAAVHSFLCC*RKLLST
Trigger: TGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGA...GTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATATCCCGTGGGAATGCTaGAGGATGCGGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNIPWEC*RMRLMS
Trigger: ACTCATCAGCCGCATCCTGCAGCATTCCCACGGGAT...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGAGTCTGAGTCAGCTCTaGAGAGTTCAATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMSLSQL*RVQWSH
Trigger: ATGGCTCCATTGAACTCTGCAGAGCTGACTCAGACT...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCAGTCTGAGTCAGCTCTaGAGAGTTCAATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLSLSQL*RVQWSH
Trigger: ATGGCTCCATTGAACTCTGCAGAGCTGACTCAGACT...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSACCR*SNASSV
Trigger: CACGGAACTGGCATTACTGCAGCGGCAACATGCGCT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGGGCTCCCCAGTTCCTaGCTCTCTCGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLGLPSS*LSRSSK
Trigger: CTTTGAGGACCGAGAGAGGCAGGAACTGGGGAGCCC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCTCCAAGACGGATGTTaGAGGGGAGGGCCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLLQDGC*RGGPLG
Trigger: CCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTACAGACTTGGAAAGCATaGCAGTGGCCGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLQTWKA*QWPSGP
Trigger: TGGACCACTCGGCCACTGGCATGCTTTCCAAGTCTG...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGCCTGGGCATCCCGATaGTTGCAGTCTCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLAWASR*LQSPPE
Trigger: CTCTGGAGGAGACTGCAAGCATCGGGATGCCCAGGC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462460.6
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATATAGCGGGCATCCTTaGCTTCCTTCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPYSGHP*LPSSSP
Trigger: AGGAGAAGATGAAGGAAGCCAAGGATGCCCGCTATA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCTATAGCGGGCATCCTTaGCTTCCTTCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLYSGHP*LPSSSP
Trigger: AGGAGAAGATGAAGGAAGCCAAGGATGCCCGCTATA...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCATCTTTACAGCGGTTGTaGATAGTCACATTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPSLQRL*IVTLQV
Trigger: AACCTGCAATGTGACTATCCACAACCGCTGTAAAGA...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCAGGGCACAGGGCCTaGCGTCGGCGTTCTAATAGC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSPGHRA*RRRSNS
Trigger: GCTATTAGAACGCCGACGCCAGGCCCTGTGCCCTGG...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTCCTCCTCGATCCCGTaGGAATGCTGCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSSSIP*ECCRMR
Trigger: CCGCATCCTGCAGCATTCCCACGGGATCGAGGAGGA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCCCTTTCTCCTGGTTaGCAATGTCTCGTACGATTA +
Preference number: 4 (lower is better)
Translates to: WPQVSKDPKSWQGQFAVLSLSPG*QCLVRL
Trigger: TAATCGTACGAGACATTGCCAACCAGGAGAAAGGGA...AAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGAACATCCCTTTCTCCTaGTTGGCAATGTCTCGTACG +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMNIPFS*LAMSRT
Trigger: CGTACGAGACATTGCCAACCAGGAGAAAGGGATGTT...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCTTCGGCCTGGAAATaGGTCATCTCAGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSSAWK*VISANS
Trigger: GCTGTTTGCTGAGATGACCCATTTCCAGGCCGAAGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGTTACCACCGCTGTCTaGTTCCAAGGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLVTTAV*FQGQGW
Trigger: CCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAAC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATTCTGGTAAAGTCTCGTaGACTGTGGGGCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNSGKVS*TVGRRQ
Trigger: CTGTCTCCGCCCCACAGTCCACGAGACTTTACCAGA...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGGCCCCAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: MAPGIQGSQELARTICSSKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...AGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTGGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TACCCCAGTAGTGTTCAAGGACAAGGCCCTCTGATCCCTATGGCTTGGTTCCCAGAACTTGTTTCTAAATaGCTGGGGAAGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: YPSSVQGQGPLIPMAWFPELVSK*LGKRSV
Trigger: TACTGACCTCTTCCCCAGCCATTTAGAAACAAGTTC...TGGGAACCAAGCCATAGGGATCAGAGGGCCTTGTCCTTGAACACTACTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCGACATTTGGGGGCTaGTCGACATTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSTFGG*STFGGK
Trigger: CTTGCCCCCAAATGTCGACCAGCCCCCAAATGTCGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATCCTTTTCCCGGGTCTTaGCCTTTCCGGTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANPFPGS*PFRSCP
Trigger: CGGGCATGACCGGAAAGGCCAAGACCCGGGAAAAGG...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCACCTCCAGTTGTTCTCTaGATTCAACTGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPPPVVL*IQLQKG
Trigger: GCCTTTCTGCAGTTGAATCCAGAGAACAACTGGAGG...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATAAAGCCCCTGACCTTTaGAGGGGTACAGCATGCGAG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNKAPDL*RGTACE
Trigger: CTCGCATGCTGTACCCCTCCAAAGGTCAGGGGCTTT...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673475.1
3UTR CAA 72 bp TCATGGTTGCTGAGGTGGAAGATGAGGTCAGGGCTCTaGGAGATTTTCCAACCCACCCTAGAACTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SWLLRWKMRSGL*EIFQPTLELVS
Trigger: AGAAACAAGTTCTAGGGTGGGTTGGAAAATCTCCAAGAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCTACTTGGTGATGCGCTaGGTCACCAGCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFYLVMR*VTSRMH
Trigger: GTGCATCCTGCTGGTGACTCAGCGCATCACCAAGTA...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCGCCTCCTCTTGCGGTaGTCTCAGCTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNRLLLR*SQLISI
Trigger: AATGGAAATCAGCTGAGATCACCGCAAGAGGAGGCG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCTCCCAGGGCTTCCATaGAGGACGGAGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLLPGLP*RTEKGR
Trigger: TCTCCCTTTCTCCGTCCTTCATGGAAGCCCTGGGAG...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp GACATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCACTCCAAGAGTCAGCTaGAAAGTCCTTCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: DILLLHHLLFMLLQEAAVTPRVS*KVLLIH
Trigger: ATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGT...GACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp AGACTCCAAGAGTCAGCTGCAAAGTCCTTCTCATCCATCTCAAAGTCACTCATCAGTGTCCTCACATGGTaGAGCTCTGTCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: RLQESAAKSFSSISKSLISVLTW*SSVWIS
Trigger: GCTAATCCAGACAGAGCTGCACCATGTGAGGACACT...GATGAGTGACTTTGAGATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCGTACGATTAGATTCTaGAGCGATACCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLRTIRF*SDTTEG
Trigger: GCCTTCAGTGGTATCGCTGCAGAATCTAATCGTACG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTCCCGGGATGCTGTGTaGACCTCGTACATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGSRDAV*TSYISG
Trigger: ACCTGAGATGTACGAGGTGCACACAGCATCCCGGGA...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTAGTCTGAGTCAGCTCTaGAGAGTTCAATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSLSQL*RVQWSH
Trigger: ATGGCTCCATTGAACTCTGCAGAGCTGACTCAGACT...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTACCTTCCTCCTCGCTaGCAGTGTCAGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLYLPPR*QCQGHC
Trigger: GCAGTGACCCTGACACTGGCAGCGAGGAGGAAGGTA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGGGACATGGCCCTGCCCACAGCCCTCCTTTATTTAAAGGGCAGTAGGGTGCTGGCTTCGATCTCTAATTaGCTACGATCTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: RDMALPTALLYLKGSRVLASISN*LRSLKN
Trigger: ATTTTTAAGAGATCGTAGGCAATTAGAGATCGAAGC...CAGCACCCTACTGCCCTTTAAATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCAGACTTGGAAAGCATaGCAGTGGCCGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFQTWKA*QWPSGP
Trigger: TGGACCACTCGGCCACTGGCATGCTTTCCAAGTCTG...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGTAGATGGCCGAGCTTaGCCGCTCCCGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSVDGRA*PLPDGC
Trigger: ACAACCATCCGGGAGCGGCCAAGCTCGGCCATCTAC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCTAGGACCTGAGAACTaGCTGATGAGCAGATCACCC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNLGPEN*LMSRSP
Trigger: GGGTGATCTGCTCATCAGCCAGTTCTCAGGTCCTAG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCTTTAAGGCCTTGCTGTaGCGGCTGCAGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFFKALL*RLQNSE
Trigger: CTCGGAGTTCTGCAGCCGCCACAGCAAGGCCTTAAA...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATTTCCGGATGAATTGCTaGAAGCGTTTGTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNFRMNC*KRLSRA
Trigger: CGCCCGAGACAAACGCTTCCAGCAATTCATCCGGAA...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAATCCCTTTCTCCTGGTTaGCAATGTCTCGTACGATTA +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKSLSPG*QCLVRL
Trigger: TAATCGTACGAGACATTGCCAACCAGGAGAAAGGGA...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCATCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCCCCAACAAACCATTATaGCCACCCCAACCTTTATTC +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLPNKPL*PPQPLF
Trigger: GAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGG...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCATGGTTGCTGAGGTaGAAGATGAGGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSWLLR*KMRSGL
Trigger: GAGCCCTGACCTCATCTTCCACCTCAGCAACCATGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTCGACATTTGGGGGCTaGTCGACATTTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGSTFGG*STFGGK
Trigger: CTTGCCCCCAAATGTCGACCAGCCCCCAAATGTCGA...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp ATGAAGGACGGAGAAAGGGAGAACAGCAGTAAGAGGTTGAGGGGAGAGGAGAAAAAATTCTTCGACATTTaGGGGCTGGTCGACATTTGG +
Preference number: 4 (lower is better)
Translates to: MKDGERENSSKRLRGEEKKFFDI*GLVDIW
Trigger: CCAAATGTCGACCAGCCCCCAAATGTCGAAGAATTT...TTTCTCCTCTCCCCTCAACCTCTTACTGCTGTTCTCCCTTTCTCCGTCCTTCAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATATGCCAGTGGCCGAGTaGTCCAAAGGGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANMPVAE*SKGPAD
Trigger: ATCTGCTGGCCCTTTGGACCACTCGGCCACTGGCAT...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGAATGTCCTTCCAGCTaGCTGCAGCGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGECPSS*LQRFLR
Trigger: CCTCAGGAAACGCTGCAGCCAGCTGGAAGGACATTC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTTCGGTTCCGCATGTTaGGGGAGTCTGTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLFGSAC*GSLWTV
Trigger: CACAGTCCACAGACTCCCTCAACATGCGGAACCGAA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGGGATTAGCTCATAGATaGCATCTTGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: CSLIIGKLESPRLAPSVMGLAHR*HLAASS
Trigger: TGATGAAGCAGCAAGATGTCATCTATGAGCTAATCC...CATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp GACATCTTGCTGCTTCATCACCTCCTTTTTATGCTGCTGCAGGAAGCTGCTGTCGGATTAGCTCATAGATaGCATCTTGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: DILLLHHLLFMLLQEAAVGLAHR*HLAASS
Trigger: TGATGAAGCAGCAAGATGTCATCTATGAGCTAATCC...GACAGCAGCTTCCTGCAGCAGCATAAAAAGGAGGTGATGAAGCAGCAAGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR TCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCGGATTAGCTCATAGATaGCATCTTGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLGLAHR*HLAASS
Trigger: TGATGAAGCAGCAAGATGTCATCTATGAGCTAATCC...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCTCCGCACTAGGACCTaGGAACTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSLRTRT*ELADEQ
Trigger: CTGCTCATCAGCCAGTTCTCAGGTCCTAGTGCGGAG...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCGGGAAGAAGGCATaGACCACTGGCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANCGKKA*TTGICG
Trigger: ACCACAGATGCCAGTGGTTCATGCCTTCTTCCCGCA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATAGGGCCGCTTTCTGTTaGTTCTGCTTGACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNRAAFC*FCLTLV
Trigger: TACCAAGGTCAAGCAGAAGCAACAGAAAGCGGCCCT...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCGAAGAGAAACGGACTaGAAGGCGGTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNRRETD*KAVLFF
Trigger: GAAGAACAACACCGCCTTGCAGTCCGTTTCTCTTCG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGCTGCTGCAGGAAGCTaGTGTCCACAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSAAAGS*CPQQDS
Trigger: GGAGTCTTGCTGTGGACAGCAGCTTCCTGCAGCAGC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGATCCCGTGGGAATGCTaGAGGATGCGGCTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLIPWEC*RMRLMS
Trigger: ACTCATCAGCCGCATCCTGCAGCATTCCCACGGGAT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGCCCGGTCCTTCTGCTaGAACTCCATCTTAATTCGC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFARSFC*NSILIR
Trigger: GCGAATTAAGATGGAGTTGCAGCAGAAGGACCGGGC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTTCCATCAGAGTGTCCTaGTGGGCCACAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSSIRVS*WATAAC
Trigger: ACAGGCAGCTGTGGCCCAGCAGGACACTCTGATGGA...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCAGCAGCGCATGTTaGCGCTGCAGTAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANCSSAC*RCSNAS
Trigger: ACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTACAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATCAAGAACCCAGCAGCTaGGTGGATGAGCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNQEPSS*VDEPEY
Trigger: ATATTCAGGCTCATCCACGCAGCTGCTGGGTTCTTG...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAGTCACATTGCAGGTTaGGCAGATGAGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSHIAG*ADEGFL
Trigger: AAGGAAGCCCTCATCTGCCCAACCTGCAATGTGACT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATAGTCACATTGCAGGTTaGGCAGATGAGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNSHIAG*ADEGFL
Trigger: AAGGAAGCCCTCATCTGCCCAACCTGCAATGTGACT...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTCGGCGTTCTAATAGCTaGCTGAGGAAGCGTGTATGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGRRSNS*LRKRVW
Trigger: CCATACACGCTTCCTCAGCCAGCTATTAGAACGCCG...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTGCCTCGGCTGGGCTGTaGGGGGTTGAAACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSASAGL*GVETQV
Trigger: TACTTGAGTTTCAACCCCCCACAGCCCAGCCGAGGC...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTCCCAGGGGGTGTTGTaGCCTAATTCCCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANSQGVL*PNSPSF
Trigger: GAAGCTAGGGGAATTAGGCCACAACACCCCCTGGGA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATCTGATCCCTATGGCTTaGTTCCCATGTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANLIPMA*FPCPWS
Trigger: GGACCAGGGACATGGGAACCAAGCCATAGGGATCAG...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTAACCCAGCAGCTGCGTaGATGAGCCTGAATATACCC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGNPAAA*MSLNIP
Trigger: GGGTATATTCAGGCTCATCCACGCAGCTGCTGGGTT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTCCCAACAAACCATTATaGCCACCCCAACCTTTATTC +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLPNKPL*PPQPLF
Trigger: GAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGG...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TCCCTCACCCCCAACAAACCATTATGGCCACCCCAACCTTTATTCCATCAACTCTTGTTTCTAAATGGCTaGGGAAGAGGTCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: SLTPNKPLWPPQPLFHQLLFLNG*GRGQYR
Trigger: CCTATACTGACCTCTTCCCCAGCCATTTAGAAACAA...GAGTTGATGGAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGGGGTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTGTGGCCTAATTCCCCTAGCTTCTTAAATGGCCCCAGGTATCCAAGGATCCCAGAACTTGTTTCTAAATaGCTGGGGAAGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LWPNSPSFLNGPRYPRIPELVSK*LGKRSV
Trigger: TACTGACCTCTTCCCCAGCCATTTAGAAACAAGTTC...TGGGATCCTTGGATACCTGGGGCCATTTAAGAAGCTAGGGGAATTAGGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTCACGGGTACAGACTTaGAAAGCATGCCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSRVQT*KACQWP
Trigger: CGGCCACTGGCATGCTTTCCAAGTCTGTACCCGTGA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTTACCTCTTCGTCAATaGGGGATTCCACGGATAGGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGLPLRQ*GIPRIG
Trigger: CCCTATCCGTGGAATCCCTCATTGACGAAGAGGTAA...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313695.11
CDS-3UTR TCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCGTTCAATGGAGCCATTaGAGGTTCTGGCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFVQWSH*RFWPHH
Trigger: ATGGTGAGGCCAGAACCTTCAATGGCTCCATTGAAC...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCTGCGGTGATCTCAGCTaGTTTCCATTTCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFCGDLS*FPFRSL
Trigger: GAGGGATCGAAATGGAAATCAGCTGAGATCACCGCA...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATCCTTTTTATGCTGCTaGAGGAAGCTGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLSFLCC*RKLLST
Trigger: TGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp ATCTGTGGTGTAGCTTTCGGATGTCCCAGGGGGTGTTGTGGCCTAATTCCCCTAGCTTCGATCTCTAATTaGCTACGATCTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ICGVAFGCPRGCCGLIPLASISN*LRSLKN
Trigger: ATTTTTAAGAGATCGTAGGCAATTAGAGATCGAAGC...TAGGGGAATTAGGCCACAACACCCCCTGGGACATCCGAAAGCTACACCACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATTCTCTGGATTCAACTaGAGAAAGGCAGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLFSGFN*RKAEAS
Trigger: ACTGGCCTCTGCCTTTCTGCAGTTGAATCCAGAGAA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673475.1
CDS-3UTR CCA 90 bp CCTCATCATTGGCAAATTGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTCTTTCTTTACAGCGGTTGTaGATAGTCACATTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PHHWQIGVPKVSPLSNVLSLQRL*IVTLQV
Trigger: AACCTGCAATGTGACTATCCACAACCGCTGTAAAGA...AAGAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCTAGGACCTGAGAACTaGCTGATGAGCAGATCACCC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLLGPEN*LMSRSP
Trigger: GGGTGATCTGCTCATCAGCCAGTTCTCAGGTCCTAG...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTTCCGGATGAATTGCTaGAAGCGTTTGTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANFRMNC*KRLSRA
Trigger: CGCCCGAGACAAACGCTTCCAGCAATTCATCCGGAA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTAACCACTGGCATCTGTaGTGTAGCTTTCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGNHWHL*CSFRMS
Trigger: GGACATCCGAAAGCTACACCACAGATGCCAGTGGTT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAGGTATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGAAGGCATGAACCACTaGCATCTGTGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: QVSKDPKSWQGQFAVLSNEGMNH*HLWCSF
Trigger: AAAGCTACACCACAGATGCCAGTGGTTCATGCCTTC...ATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCAAAGGGCCAGCAGATaGATGACAGGAATCCTGATC +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFQRASR*MTGILI
Trigger: GATCAGGATTCCTGTCATCCATCTGCTGGCCCTTTG...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTTCACGGGTACAGACTTaGAAAGCATGCCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSSRVQT*KACQWP
Trigger: CGGCCACTGGCATGCTTTCCAAGTCTGTACCCGTGA...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462460.6
ENST00000673475.1
3UTR CAA 72 bp TGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATaGGAGTCCCCAAGGTTAGCCCCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: CSSFKCSLIIGK*ESPRLAPSVMF
Trigger: GAACATTACTGAGGGGGCTAACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAAACTGAAATGGTGGTaGAGAGGTGCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLKLKWW*RGAHWY
Trigger: ATACCAATGGGCACCTCTTCACCACCATTTCAGTTT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGTTCTAATAGCTGGCTaGGGAAGCGTGTATGGATGT +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGVLIAG*GSVYGC
Trigger: ACATCCATACACGCTTCCTCAGCCAGCTATTAGAAC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTGAAGTCCATAGAGATTaGCCAATCGCTGTAACGCCT +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGEVHRD*PIAVTP
Trigger: AGGCGTTACAGCGATTGGTCAATCTCTATGGACTTC...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGACTCCAAGAGTCAGCTGCAAAGTCCTTCTCATCCATCTCAAAGTCACTCATCGGGGAGACTCATCATTaGAATGTTCTTACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: RLQESAAKSFSSISKSLIGETHH*NVLTSK
Trigger: CTTCGAAGTAAGAACATTTCAATGATGAGTCTCCCC...GATGAGTGACTTTGAGATGGATGAGAAGGACTTTGCAGCTGACTCTTGGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470874.5
CDS-3UTR GCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATCGAAGAGAAACGGACTaGAAGGCGGTGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANRRETD*KAVLFF
Trigger: GAAGAACAACACCGCCTTGCAGTCCGTTTCTCTTCG...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTTCCTTTTTATGCTGCTaGAGGAAGCTGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGSFLCC*RKLLST
Trigger: TGTGGACAGCAGCTTCCTGCAGCAGCATAAAAAGGA...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGAGTGTCCTCACATGGTaGAGCTCTGTCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSVLTW*SSVWIS
Trigger: GCTAATCCAGACAGAGCTGCACCATGTGAGGACACT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTACTTTCCGGATGAATTaGTGGAAGCGTTTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGTFRMN*WKRLSR
Trigger: CCGAGACAAACGCTTCCAGCAATTCATCCGGAAAGT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTCGTACGATTAGATTCTaGAGCGATACCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGRTIRF*SDTTEG
Trigger: GCCTTCAGTGGTATCGCTGCAGAATCTAATCGTACG...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAGTCTGAGTCAGCTCTaGAGAGTTCAATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFSLSQL*RVQWSH
Trigger: ATGGCTCCATTGAACTCTGCAGAGCTGACTCAGACT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTAAAGGGACATGGCCCTaGCCACAGCCCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSKGTWP*PQPSFI
Trigger: AATAAAGGAGGGCTGTGGGCAGGGCCATGTCCCTTT...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAAAATTCTTCGACATTTaGGGGCTGGTCGACATTTGG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLKFFDI*GLVDIW
Trigger: CCAAATGTCGACCAGCCCCCAAATGTCGAAGAATTT...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCAAACTGAAATGGTGGTaGAGAGGTGCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFKLKWW*RGAHWY
Trigger: ATACCAATGGGCACCTCTTCACCACCATTTCAGTTT...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATGGGGAGACTCATCATTaGAATGTCCAGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANGETHH*NVQQCW
Trigger: CCAACATTGCTGGACATTTCAATGATGAGTCTCCCC...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGACTTTCCGGATGAATTaGTGGAAGCGTTTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLTFRMN*WKRLSR
Trigger: CCGAGACAAACGCTTCCAGCAATTCATCCGGAAAGT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGAGTGCCCGGTCCTTCTaGTGCAACTCCATCTTAATT +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSARSF*CNSILI
Trigger: AATTAAGATGGAGTTGCAGCAGAAGGACCGGGCACT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGAGTCTGAGTCAGCTCTaGAGAGTTCAATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSLSQL*RVQWSH
Trigger: ATGGCTCCATTGAACTCTGCAGAGCTGACTCAGACT...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTCCCCAAGGTATGTTCCCTCATCATTaGCAAATTGGAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FAVLSNVPSSLANWSPQGMFPHH*QIGVPK
Trigger: CTTGGGGACTCCAATTTGCCAATGATGAGGGAACAT...ACCTTGGGGACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTATTGTTTCTAAATGGCTaGGGAAGAGGTCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLLFLNG*GRGQYR
Trigger: CCTATACTGACCTCTTCCCCAGCCATTTAGAAACAA...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR TCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATAAACTGAAATGGTGGTaGAGAGGTGCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANKLKWW*RGAHWY
Trigger: ATACCAATGGGCACCTCTTCACCACCATTTCAGTTT...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTCCTCAAAGTTTCGATaGACAGAGCGAGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSSKFR*TERVVT
Trigger: TGTCACTACTCGCTCTGTCCATCGAAACTTTGAGGA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp AGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATAAGGATCCCAAGAGCTaGCAAGGACAATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SWQGQFAVLSNVPSSLANKDPKS*QGQFAV
Trigger: AACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTT...ATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGCCCAACAAACCATTATaGCCACCCCAACCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLPNKPL*PPQPLF
Trigger: GAATAAAGGTTGGGGTGGCCATAATGGTTTGTTGGG...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp TATCCAAGGATCCCAAGAGCTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCTTGTTTCTAAATGGCTaGGGAAGAGGTCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: YPRIPRAGKDNLQFFQMFLFLNG*GRGQYR
Trigger: CCTATACTGACCTCTTCCCCAGCCATTTAGAAACAA...GAACATTTGAAAGAACTGCAAATTGTCCTTGCCAGCTCTTGGGATCCTTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGTCTTTACAGCGGTTGTaGATAGTCACATTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLSLQRL*IVTLQV
Trigger: AACCTGCAATGTGACTATCCACAACCGCTGTAAAGA...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CTGGCAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAACTTGTTTCTAAATaGCTGGGGAAGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LARTICSSFKCSLIIGKLELVSK*LGKRSV
Trigger: TACTGACCTCTTCCCCAGCCATTTAGAAACAAGTTC...CAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR GCA 90 bp CTTCAGAGATGTGGAGATAGGAGGCTTCGATCTCTAATTGCCTACGATCTCTTAGCTTCGATCTCTAATTaGCTACGATCTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LQRCGDRRLRSLIAYDLLASISN*LRSLKN
Trigger: ATTTTTAAGAGATCGTAGGCAATTAGAGATCGAAGC...TAAGAGATCGTAGGCAATTAGAGATCGAAGCCTCCTATCTCCACATCTCTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CCA 90 bp CAAGGACAATTTGCAGTTCTTTCAAATGTTCCCTCATCATTGGCAAATTGGAGTTCTTTACAGCGGTTGTaGATAGTCACATTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QGQFAVLSNVPSSLANWSSLQRL*IVTLQV
Trigger: AACCTGCAATGTGACTATCCACAACCGCTGTAAAGA...ACTCCAATTTGCCAATGATGAGGGAACATTTGAAAGAACTGCAAATTGTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS CCA 90 bp GCGCCGCCGAGGATCCACAGGTCTGCGGGCCCAGGGGGCCTCAGCTaGGAGTGGCTCGGTCTGGCCCAGGGCGGCCAGCTGCCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: APPRIHRSAGPGGLS*EWLGLAQGGQLPSS
Trigger: GCTCGAAGGCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGGGCCCGCAGACCTGTGGATCCTCGGCGGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS GCA 90 bp GGCGGCCAGCTGCCTTCGAGCCTCTTCGGCCTCACGCTCCAGCAGTaGCCGGGCCTGCTCACTCTCCCGGAGCCGGGCCTCCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GGQLPSSLFGLTLQQ*PGLLTLPEPGLQAA
Trigger: GGCAGCCTGGAGGCCCGGCTCCGGGAGAGTGAGCAGGCCCGGGCACTGCTGGAGCGTGAGGCCGAAGAGGCTCGAAGGCAGCTGGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS CCA 90 bp ACAGGTCTGCGGGCCCAGGGGGCCTCAGCTGGGAGTGGCTCGGTCTaGCCCAGGGCGGCCAGCTGCCTTCGAGCCTCTTCGGCCTCACGC +
Preference number: 5 (lower is better)
Translates to: TGLRAQGASAGSGSV*PRAASCLRASSASR
Trigger: GCGTGAGGCCGAAGAGGCTCGAAGGCAGCTGGCCGCCCTGGGCCAGACCGAGCCACTCCCAGCTGAGGCCCCCTGGGCCCGCAGACCTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS GCA 90 bp ACCGTCTGTATCCAGTGGCCAGTGACGGGCACCAGGGAGGAACACTaGCTCGCCTCAGCCCAGCCCTGTTGCTTGCCCCCAGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TVCIQWPVTGTREEH*LASAQPCCLPPAQP
Trigger: GGGCTGGGCTGGGGGCAAGCAACAGGGCTGGGCTGAGGCGAGGCAGTGTTCCTCCCTGGTGCCCGTCACTGGCCACTGGATACAGACGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495070.2
CDS GCA 90 bp CGCCGGCAGCGCCGTAGCTCCTCCTGCAGCAGCGCATGTTGCCGCTaGAGTAATGCCAGTTCCGTGGCCTGCTTTTCAGGGGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: RRQRRSSSCSSACCR*SNASSVACFSGATG
Trigger: CCCTGTGGCCCCTGAAAAGCAGGCCACGGAACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCGCTGCCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS-3UTR CAA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCGCCAGGCACTGGGGTTaGGGCCCGAGGGTCCATGCG +
Preference number: 5 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCARHWG*GPRVHA
Trigger: CGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGGC...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS GCA 90 bp GTTGCCCGTTCTTCACCTAGCCGCCGGCAGCGCCGTAGCTCCTCCTaGAGCAGCGCATGTTGCCGCTGCAGTAATGCCAGTTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: VARSSPSRRQRRSSS*SSACCRCSNASSVA
Trigger: GGCCACGGAACTGGCATTACTGCAGCGGCAACATGCGCTGCTGCAGGAGGAGCTACGGCGCTGCCGGCGGCTAGGTGAAGAACGGGCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000470541.6
ENST00000673475.1
CDS CCA 90 bp AGCAACTTTCTTTCAAGCGGCCTAAAGCACTCGGTCCCGCCGGCTTaGAGGCGACCAAGCCCAGGTCCGCTCCGCTCCCTCCCGGGATCC +
Preference number: 5 (lower is better)
Translates to: SNFLSSGLKHSVPPA*RRPSPGPLRSLPGS
Trigger: GGATCCCGGGAGGGAGCGGAGCGGACCTGGGCTTGGTCGCCTCCAAGCCGGCGGGACCGAGTGCTTTAGGCCGCTTGAAAGAAAGTTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313695.11
ENST00000497907.5
CDS-3UTR CAA 90 bp CTCCAAGACGGATGTTGCAGGGGAGGGCCGTTAGGGCAAGAACCCAGCAGCTGCCGGCCAAAGGGGCCCTaGCCAGGCACTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LQDGCCRGGPLGQEPSSCRPKGP*PGTGVW
Trigger: CCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCCG...GCAGCTGCTGGGTTCTTGCCCTAACGGCCCTCCCCTGCAACATCCGTCTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000673475.1
CDS CCA 90 bp GCGCCTCAGAAGTTCCTCTCGGCCAAAGGGGCCCTTGCCAGGCACTaGGGTTTGGGCCCGAGGGTCCATGCGGTTGTAGATCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: APQKFLSAKGALARH*GLGPRVHAVVDLLQ
Trigger: CTGCAGGAGATCTACAACCGCATGGACCCTCGGGCCCAAACCCCAGTGCCTGGCAAGGGCCCCTTTGGCCGAGAGGAACTTCTGAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000462460.6
ENST00000470975.2
ENST00000474428.6
ENST00000673475.1
CDS CCA 90 bp CAAGGGCAGGGCTGGCTCTCGGGGTGTCAAGAGCAGTTCCACTCCTaGCCCCACCAGCAGGTCTTTCAGACCCTCCACCTCACGGATGGC +
Preference number: 5 (lower is better)
Translates to: QGQGWLSGCQEQFHS*PHQQVFQTLHLTDG
Trigger: GCCATCCGTGAGGTGGAGGGTCTGAAAGACCTGCTGGTGGGGCCAGGAGTGGAACTGCTCTTGACACCCCGAGAGCCAGCCCTGCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS CCA 90 bp CCCAGGACTCGTGTTACCACCGCTGTCTGGTTCCAAGGGCAGGGCTaGCTCTCGGGGTGTCAAGAGCAGTTCCACTCCTGGCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: PRTRVTTAVWFQGQG*LSGCQEQFHSWPHQ
Trigger: CTGGTGGGGCCAGGAGTGGAACTGCTCTTGACACCCCGAGAGCCAGCCCTGCCCTTGGAACCAGACAGCGGTGGTAACACGAGTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313667.8
ENST00000313695.11
ENST00000361247.9
ENST00000368315.8
ENST00000462460.6
ENST00000673475.1
CDS CCA 90 bp CCTCGTCCACATTGGACAGCAGCTCCTTCACTAGCCCCAGTGCTGTaGTCAGGTCCTGGCGCTCCTCCTCGATCCCTGGCACCGGGGGTT +
Preference number: 5 (lower is better)
Translates to: PRPHWTAAPSLAPVL*SGPGAPPRSLAPGV
Trigger: AACCCCCGGTGCCAGGGATCGAGGAGGAGCGCCAGGACCTGACCACAGCACTGGGGCTAGTGAAGGAGCTGCTGTCCAATGTGGACGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcri