RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF18 (Homo sapiens)

Ensembl gene IDs: ENSG00000104880

Ensembl transcript IDs: ENST00000319670.14, ENST00000359920.11, ENST00000594665.2, ENST00000595600.1, ENST00000617428.4, ENST00000668164.2, ENST00000671891.2

Found 1743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGATGCTGCCGACGCCACCTGGCCCCTCCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGG +
Preference number: 1 (lower is better)
Translates to: QMLPTPPGPSWCPNP*LHCRAAAVERGPGR
Trigger: CCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGGCGTCGGCAGCATCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTC +
Preference number: 1 (lower is better)
Translates to: GRQPWELISRGLRTL*PGCVPALAEARGPL
Trigger: GAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp CCTGGAAGGTGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTaGGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGGCTGAAGCTA +
Preference number: 1 (lower is better)
Translates to: PGRWDASPGSSFPGG*GPCAQGVYPPWLKL
Trigger: TAGCTTCAGCCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCTCTCTGCCCATGCCCCCGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: PNPQNLTGGPLMFPQ*ALPRGPLCPCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GTCTGTGATGTGCCAGCCCCCACCTGGAAGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGT +
Preference number: 1 (lower is better)
Translates to: VCDVPAPTWKVGRQP*ELISRGLRTLCPGC
Trigger: ACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTG +
Preference number: 1 (lower is better)
Translates to: WDMALSTVCDVPAPT*KVGRQPWELISRGL
Trigger: CAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp GTGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTGGAAGGTGGGACGCCAGCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: VHPLHALGHGALDSL*CASPHLEGGTPALG
Trigger: TCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGGCCACTTG +
Preference number: 1 (lower is better)
Translates to: PNTSFLHPSRERTVS*NSSLQARGPHSGHL
Trigger: CAAGTGGCCGCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGTCAGCCCCTTTCACGATGGGCTTCCAAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCCTCAGTGGGCCCTGCCCCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: GQPLSRWASKPTEPD*RATDVPSVGPAPWP
Trigger: GGGCCACGGGGCAGGGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCCGGGATCTGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACG +
Preference number: 1 (lower is better)
Translates to: PGICSSQDPGFGRRT*PWQGLTCTPLGTRT
Trigger: CGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCAGATCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCCCCGCCCCCT +
Preference number: 1 (lower is better)
Translates to: ATVFSGPCHQWAVWL*GSGSRLAPAPAPPP
Trigger: AGGGGGCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp GTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGG +
Preference number: 1 (lower is better)
Translates to: VPALAEARGPLPQTG*ACEQQRLPLGSRVW
Trigger: CCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCCCCG +
Preference number: 1 (lower is better)
Translates to: HLATVFSGPCHQWAV*LWGSGSRLAPAPAP
Trigger: CGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGGAGGGGACAG +
Preference number: 1 (lower is better)
Translates to: LQKQLQGPEHRQAGP*QAVISGLLGKRRGQ
Trigger: CTGTCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGT +
Preference number: 1 (lower is better)
Translates to: GPHSGHLSTCCNVSR*ILCMPWDMALSTVC
Trigger: ACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCT +
Preference number: 1 (lower is better)
Translates to: AWGHLATVFSGPCHQ*AVWLWGSGSRLAPA
Trigger: AGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CGGCAGCTCCTTCTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGG +
Preference number: 1 (lower is better)
Translates to: RQLLLKARSVLSSAP*RAGTVPHCLGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAGAAGGAGCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCTAACCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTaGCCCCTGCCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: ANPTETAARPRAPTG*PLPGGHQWFAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: LAATSLGASSACPGT*RSRQSVMCQPPPGR
Trigger: CCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTaGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGC +
Preference number: 1 (lower is better)
Translates to: SGEGLGPGRGSHVPH*EQGRSARTQSYHQC
Trigger: GCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp ATCTGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGC +
Preference number: 1 (lower is better)
Translates to: ICSSQDPGFGRRTWP*QGLTCTPLGTRTIS
Trigger: GCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: ATCPLAATSLGASSA*PGTWRSRQSVMCQP
Trigger: GGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GTGGCATCTCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTaGCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTA +
Preference number: 1 (lower is better)
Translates to: VASRRAGPAHAGSGG*QGLGMFSSQQNRNV
Trigger: TACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACC +
Preference number: 1 (lower is better)
Translates to: LSTCCNVSRCILCMP*DMALSTVCDVPAPT
Trigger: GGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: ALSPPELDRGWISPP*DVPAPLMLPNTSFL
Trigger: GAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATaGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCC +
Preference number: 1 (lower is better)
Translates to: QGLTWALSPPELDRG*ISPPWDVPAPLMLP
Trigger: GGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp AGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCA +
Preference number: 1 (lower is better)
Translates to: SGHLSTCCNVSRCIL*MPWDMALSTVCDVP
Trigger: TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGA +
Preference number: 1 (lower is better)
Translates to: QGRSARTQSYHQCLG*RTRLDMGPFSTGAG
Trigger: TCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAG +
Preference number: 1 (lower is better)
Translates to: GNKDDQPGPSPTTNA*GAEQGLTWALSPPE
Trigger: CTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: GGLDRHTPAQEGARV*ECSLHNRTGMYSQL
Trigger: AAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp CAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCT +
Preference number: 1 (lower is better)
Translates to: QDPVLPPMLGVQNKA*HGPFLHRSWIVDGS
Trigger: AGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GAGGCCCGCTCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTCAAAACCA +
Preference number: 1 (lower is better)
Translates to: EARSPRQAERVNSNG*PWEAEFGKQLVSKP
Trigger: TGGTTTTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACC +
Preference number: 1 (lower is better)
Translates to: HWEQGRSARTQSYHQ*LGCRTRLDMGPFST
Trigger: GGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTTGACATaGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCA +
Preference number: 1 (lower is better)
Translates to: PSPTTNAWGAEQGLT*ALSPPELDRGWISP
Trigger: TGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp AGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCT +
Preference number: 1 (lower is better)
Translates to: RTRLDMGPFSTGAGS*MDLTTLGCPSTFDA
Trigger: AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CGCTCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTaGGAAGCAGAGTTTGGGAAACAGCTGGTTTCAAAACCAATGCCA +
Preference number: 1 (lower is better)
Translates to: RSPRQAERVNSNGCP*EAEFGKQLVSKPMP
Trigger: TGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPEGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCACTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp AGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCC +
Preference number: 2 (lower is better)
Translates to: SCNSSLQARGPHSGH*STCCNVSRCILCMP
Trigger: GGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCACAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp CCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATC +
Preference number: 2 (lower is better)
Translates to: PGPSPTTNAWGAEQG*TWALSPPELDRGWI
Trigger: GATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCAGCTTCTGTAAAGTaGTCCGATACTCAGTACAAA +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSASVK*SDTQYK
Trigger: TTTGTACTGAGTATCGGAGCACTTTACAGAAGCTGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp TGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGA +
Preference number: 2 (lower is better)
Translates to: WEQGRSARTQSYHQC*GCRTRLDMGPFSTG
Trigger: TCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRADRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCISRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCISPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTESLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGILSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACGACTGAGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: AEGHWRGKGCRR*RPMPSTTETPL
Trigger: CAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp TGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTaGGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: WDASPGSSFPGG*GPCAQGVYPPW
Trigger: CCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTaGCCCCGGCCGGCAGCTCCTTCTCAAAGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: PLAPLSRGGCGA*PRPAAPSQSKV
Trigger: GACCTTGCTTTGAGAAGGAGCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp ACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCCCTCTGCCACATGGCG +
Preference number: 3 (lower is better)
Translates to: TGEGRAVGAAAR*LARLRPLCHMA
Trigger: CGCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGCTCCTGCCCCGCCCCC +
Preference number: 3 (lower is better)
Translates to: TLSPMGCMAVGL*FPVGTSSCPAP
Trigger: GGGGGCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTGGAAGGTGGGACGCCA +
Preference number: 3 (lower is better)
Translates to: LHALGHGALDSL*CASPHLEGGTP
Trigger: TGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: QLQGPEHRQAGP*QAVISGLLGKR
Trigger: CCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GVYPPWLKLEARSPRQAECVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: GEGRAVGAAARCLARLRPCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: LAEARGPLPQTG*ACEQQRLPLGS
Trigger: GCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp TCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCGAGGGGCCCGCACAGC +
Preference number: 3 (lower is better)
Translates to: SFLHPSRERTVS*NSSLQARGPHS
Trigger: GCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACATGTACCCCACTGGGA +
Preference number: 3 (lower is better)
Translates to: CSSQDPGFGRRT*PWQGLTCTPLG
Trigger: TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CCTGCGTGGGGCTCTGTTTGGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTGCCGACGCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: PAWGSVWEVDSA*FWGQMLPTPPG
Trigger: GCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTaGCCCCTGCCAGGCGGTCATCAGTGGTTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: TETAARPRAPTG*PLPGGHQWFAR
Trigger: CCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTaGGAACAAGGACGATCAGCCAGGACCCAGTCCTAC +
Preference number: 3 (lower is better)
Translates to: GLGPGRGSHVPH*EQGRSARTQSY
Trigger: GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACGTCTCTAGGTGCATCCTCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: TSLGASSACPGT*RSRQSVMCQPP
Trigger: TGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTGATGCTGCCCAACACC +
Preference number: 3 (lower is better)
Translates to: PPELDRGWISPP*DVPAPLMLPNT
Trigger: GGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTGGGATGTCCCAGCACC +
Preference number: 3 (lower is better)
Translates to: LDMGPFSTGAGS*MDLTTLGCPST
Trigger: GGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: FSGPCHQWAVWL*GSGSRLAPAPA
Trigger: GGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATaGATCTCACCACCCTGGGATGTCCCAGCACCTTTG +
Preference number: 3 (lower is better)
Translates to: TWALSPPELDRG*ISPPWDVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTG +
Preference number: 3 (lower is better)
Translates to: HLATVFSGPCHQ*AVWLWGSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: PELDRGWISPPWDVPAPLQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 3 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: YSASQECLCQHSGRRAESCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp GCGGGGTTCCCACCGCGTGGCCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAGGAATTGTGGCATCTC +
Preference number: 3 (lower is better)
Translates to: AGFPPRGRAEIP*TSPPSKELWHL
Trigger: GAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CTTCTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAA +
Preference number: 3 (lower is better)
Translates to: LLKARSVLSSAP*RAGTVPHCLGK
Trigger: TTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCTCGACAGTCTGTGATG +
Preference number: 3 (lower is better)
Translates to: PLAATSLGASSA*PGTWRSRQSVM
Trigger: CATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGGCTTGACATGGGCCCT +
Preference number: 3 (lower is better)
Translates to: QGRSARTQSYHQ*LGCRTRLDMGP
Trigger: AGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACAGTCTGTGATGTGCCA +
Preference number: 3 (lower is better)
Translates to: CCNVSRCILCMP*DMALSTVCDVP
Trigger: TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: TVFSGPCHQWAV*LWGSGSRLAPA
Trigger: AGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAACAGAACAGGAATGTAC +
Preference number: 3 (lower is better)
Translates to: DRHTPAQEGARV*ECSLHNRTGMY
Trigger: GTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAGCTCGGAGTTGATCTCCCCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTCCCTGGTTTAGTTCTG +
Preference number: 3 (lower is better)
Translates to: QLGVDLPATRMG*YDFRQLPGLVL
Trigger: CAGAACTAAACCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGAGATCAACTCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SPRQAERVNSNG*PWEAEFGKQLV
Trigger: AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: DDQPGPSPTTNA*GAEQGLTWALS
Trigger: AGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: PELDRGWISPPWDVPAPLLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCC +
Preference number: 3 (lower is better)
Translates to: ECPCSLYSASQE*LCQHSGRRAES
Trigger: GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: QKFLELLPHPRNCGISEGKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: QKFLELLPHPRNCGISEGCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAATGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 3 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GTGACTAAGATCATGACCACAACTGACAAAGACGTGTaGAGATCCCACGAAAATAGGAACATTTGCTCGACT +
Preference number: 3 (lower is better)
Translates to: VTKIMTTTDKDV*RSHENRNICST
Trigger: AGTCGAGCAAATGTTCCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGTTGTGGTCATGATCTTAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNCRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPLVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSLPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAAGCCCCGCTCCGACTaGGGCCGCAGCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEKPRSD*GRSTDR
Trigger: CCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGGCTT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTATCGGATTCCGTGCCTaGCGCCTCCACCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERIGFRA*RLHLRR
Trigger: TCGCCGCAGGTGGAGGCGCCAGGCACGGAATCCGAT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNTAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSSPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTELPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGGAGGCAGAGAGCCCTaGTCCCACCCCTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARGGREP*SHPSAL
Trigger: CAGGGCTGAGGGGTGGGAGCAGGGCTCTCTGCCTCC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQATAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGAGCTGGATCGTGGATaGATCTCACCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSELDRG*ISPPWD
Trigger: ATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGCCAGCGTTTCGAGCTaGCCCAAGGGAACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEASVSS*PKGTAG
Trigger: GCCAGCGGTTCCCTTGGGCCAGCTCGAAACGCTGGC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCTCCTGCAGCTCCCATaGCCTACGGCCAGCGTTTCG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQALLQLP*PTASVS
Trigger: CGAAACGCTGGCCGTAGGTCATGGGAGCTGCAGGAG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCGGGGCTGGCTGACATaGAAGCCCTCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLRGWLT*KPSAGP
Trigger: GGGCCCGGCAGAGGGCTTGCATGTCAGCCAGCCCCG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCTCCCGCCTCTCTCGTaGATCCTGGCCCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNLPPLS*ILALVL
Trigger: AAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCCGGGGGTGCTCCTTaGGCGAGGCTCGGCCCGATC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPGGAP*ARLGPI
Trigger: GATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCCGGGGGTGCTCCTTaGGCGAGGCTCGGCCCGATC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGGAP*ARLGPI
Trigger: GATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR TCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCILRQLL*HSRSRL
Trigger: GAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGATTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGLVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCTCAACTGCCTGCCTaGATGCTTGCCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSQLPA*MLATLL
Trigger: GAGCAGAGTGGCAAGCATGCAGGCAGGCAGTTGAGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGATGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGCGCGGCGCCAGGCTaGGCTGCGCCGTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGAAPG*AAPFLC
Trigger: GCATAAAAACGGCGCAGCCCAGCCTGGCGCCGCGCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGWGPPF*ETVIPT
Trigger: TGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLARPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCTCCGCCAGCTCTCTaGGCAGCTCCGCGACCTTTC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPPPAL*AAPRPF
Trigger: GAAAGGTCGCGGAGCTGCTCAGAGAGCTGGCGGAGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGCCAGAGAGACACCCTTaGGTCCAGGTCTTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEPERHP*VQVFSP
Trigger: AGGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGG...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTACTGTCGAAGTTCTTaGAGCACCTGCTGGACAATC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSYCRSS*STCWTI
Trigger: GATTGTCCAGCAGGTGCTTCAAGAACTTCGACAGTA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLRQLL*HSRSRL
Trigger: GAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTRVPRG*SLSEAR
Trigger: CCGAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTTACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAESSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTASWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCAGGTCAGGTTCGAGTaGGCTCCTCCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMQVRFE*APPGLA
Trigger: AGCCAGCCCCGGAGGAGCCCACTCGAACCTGACCTG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYRPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTAAGATCATGAAACGGTaGGCCTGGCGTGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERKIMKR*AWRASC
Trigger: GCATGAAGCACGCCAGGCTCACCGTTTCATGATCTT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCTGGCGCCTCCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPGAST*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGAGGCGCCAGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGGGATCGGATTCCGTaGCTGGCGCCTCCACCTGCG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGDRIP*LAPPPA
Trigger: CGCAGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTCRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTALVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTASGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGGCGCCAGGCTGGGCTaGGCCGTTTTTATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPGARLG*AVFMPR
Trigger: CCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGCATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAPSFAS*RRLHPR
Trigger: CCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTTAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACCTGGTTCTTCACCGGTaGGGCGGCTGTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHLVLHR*GGCLGS
Trigger: AGACCCCAGACAGCCGCCCCACCGGTGAAGAACCAG...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCILCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCCCGGGGGTGCTCCTTaGGCGAGGCTGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFPGGAP*ARLSSR
Trigger: TCTTGAGCTCAGCCTCGCTCAAGGAGCACCCCCGGG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCICRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLLSSS*CFRSKD
Trigger: GTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWALPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCGACCTTTCCCAGCTaGGCCGCCTTGACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMATFPS*AALTGL
Trigger: AAGACCTGTCAAGGCGGCGCAGCTGGGAAAGGTCGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACTGGCTAACAGCTCCTaGAGCTCCCATGACCTACGG +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGLANSS*SSHDLR
Trigger: CCGTAGGTCATGGGAGCTGCAGGAGCTGTTAGCCAG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRARVPRG*SLSEAE
Trigger: CTCAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLSWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCATGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLACSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCPCHP*WRPPAW
Trigger: CCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGAGCCTGGGGACACCTaGCCACTGTGTTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHEPGDT*PLCSQD
Trigger: GTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCTC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGCACAGACAGGATCTTaGAGGTCAGCAGCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERAQTGS*RSAARY
Trigger: ATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGGGCTCCTCCGGGGCTaGCTGACATGCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTGLLRG*LTCKPS
Trigger: AGAGGGCTTGCATGTCAGCCAGCCCCGGAGGAGCCC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCTTCTCCTTCTGCCTaGTCACTCGACTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPSPSA*SLDCGG
Trigger: GCCTCCGCAGTCGAGTGACCAGGCAGAAGGAGAAGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTCCCCATTTTCACCTaGAAACTGCTGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLPIFT*KLLNQE
Trigger: CTCCTGGTTCAGCAGTTTTCAGGTGAAAATGGGGAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIRSWPT*ELAPPA
Trigger: TGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAAGGGGCCTTGCACCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGRGLAP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCT...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCCTTGCTGTATTGGCTaGAGCAGCGGGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATPCCIG*SSGSGG
Trigger: CCCTCCAGACCCGCTGCTTCAGCCAATACAGCAAGG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGAGATACTCGCTGCCCTaGAGGGCCCCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERYSLP*RAPKSR
Trigger: CCTGGATTTGGGGGCCCTTCAGGGCAGCGAGTATCT...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
61% GC, longest homopolymer