RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF18 (Homo sapiens)

Ensembl gene IDs: ENSG00000104880

Ensembl transcript IDs: ENST00000319670.14, ENST00000359920.11, ENST00000594665.2, ENST00000595600.1, ENST00000617428.4, ENST00000668164.2, ENST00000671891.2

Found 1743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGATGCTGCCGACGCCACCTGGCCCCTCCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGG +
Preference number: 1 (lower is better)
Translates to: QMLPTPPGPSWCPNP*LHCRAAAVERGPGR
Trigger: CCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGGCGTCGGCAGCATCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTC +
Preference number: 1 (lower is better)
Translates to: GRQPWELISRGLRTL*PGCVPALAEARGPL
Trigger: GAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp CCTGGAAGGTGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTaGGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGGCTGAAGCTA +
Preference number: 1 (lower is better)
Translates to: PGRWDASPGSSFPGG*GPCAQGVYPPWLKL
Trigger: TAGCTTCAGCCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCTCTCTGCCCATGCCCCCGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: PNPQNLTGGPLMFPQ*ALPRGPLCPCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GTCTGTGATGTGCCAGCCCCCACCTGGAAGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGT +
Preference number: 1 (lower is better)
Translates to: VCDVPAPTWKVGRQP*ELISRGLRTLCPGC
Trigger: ACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTG +
Preference number: 1 (lower is better)
Translates to: WDMALSTVCDVPAPT*KVGRQPWELISRGL
Trigger: CAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp GTGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTGGAAGGTGGGACGCCAGCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: VHPLHALGHGALDSL*CASPHLEGGTPALG
Trigger: TCCCAGGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGGCCACTTG +
Preference number: 1 (lower is better)
Translates to: PNTSFLHPSRERTVS*NSSLQARGPHSGHL
Trigger: CAAGTGGCCGCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGTCAGCCCCTTTCACGATGGGCTTCCAAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCCTCAGTGGGCCCTGCCCCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: GQPLSRWASKPTEPD*RATDVPSVGPAPWP
Trigger: GGGCCACGGGGCAGGGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCCGGGATCTGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACG +
Preference number: 1 (lower is better)
Translates to: PGICSSQDPGFGRRT*PWQGLTCTPLGTRT
Trigger: CGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCAGATCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCCCCGCCCCCT +
Preference number: 1 (lower is better)
Translates to: ATVFSGPCHQWAVWL*GSGSRLAPAPAPPP
Trigger: AGGGGGCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp GTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGG +
Preference number: 1 (lower is better)
Translates to: VPALAEARGPLPQTG*ACEQQRLPLGSRVW
Trigger: CCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCCCCG +
Preference number: 1 (lower is better)
Translates to: HLATVFSGPCHQWAV*LWGSGSRLAPAPAP
Trigger: CGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGGAGGGGACAG +
Preference number: 1 (lower is better)
Translates to: LQKQLQGPEHRQAGP*QAVISGLLGKRRGQ
Trigger: CTGTCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGT +
Preference number: 1 (lower is better)
Translates to: GPHSGHLSTCCNVSR*ILCMPWDMALSTVC
Trigger: ACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCT +
Preference number: 1 (lower is better)
Translates to: AWGHLATVFSGPCHQ*AVWLWGSGSRLAPA
Trigger: AGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CGGCAGCTCCTTCTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGG +
Preference number: 1 (lower is better)
Translates to: RQLLLKARSVLSSAP*RAGTVPHCLGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAGAAGGAGCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCTAACCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTaGCCCCTGCCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: ANPTETAARPRAPTG*PLPGGHQWFAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: LAATSLGASSACPGT*RSRQSVMCQPPPGR
Trigger: CCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTaGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGC +
Preference number: 1 (lower is better)
Translates to: SGEGLGPGRGSHVPH*EQGRSARTQSYHQC
Trigger: GCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp ATCTGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGC +
Preference number: 1 (lower is better)
Translates to: ICSSQDPGFGRRTWP*QGLTCTPLGTRTIS
Trigger: GCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: ATCPLAATSLGASSA*PGTWRSRQSVMCQP
Trigger: GGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GTGGCATCTCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTaGCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTA +
Preference number: 1 (lower is better)
Translates to: VASRRAGPAHAGSGG*QGLGMFSSQQNRNV
Trigger: TACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp TTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCACC +
Preference number: 1 (lower is better)
Translates to: LSTCCNVSRCILCMP*DMALSTVCDVPAPT
Trigger: GGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: ALSPPELDRGWISPP*DVPAPLMLPNTSFL
Trigger: GAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATaGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCC +
Preference number: 1 (lower is better)
Translates to: QGLTWALSPPELDRG*ISPPWDVPAPLMLP
Trigger: GGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp AGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCA +
Preference number: 1 (lower is better)
Translates to: SGHLSTCCNVSRCIL*MPWDMALSTVCDVP
Trigger: TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGA +
Preference number: 1 (lower is better)
Translates to: QGRSARTQSYHQCLG*RTRLDMGPFSTGAG
Trigger: TCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAG +
Preference number: 1 (lower is better)
Translates to: GNKDDQPGPSPTTNA*GAEQGLTWALSPPE
Trigger: CTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: GGLDRHTPAQEGARV*ECSLHNRTGMYSQL
Trigger: AAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 90 bp CAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCT +
Preference number: 1 (lower is better)
Translates to: QDPVLPPMLGVQNKA*HGPFLHRSWIVDGS
Trigger: AGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp GAGGCCCGCTCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTCAAAACCA +
Preference number: 1 (lower is better)
Translates to: EARSPRQAERVNSNG*PWEAEFGKQLVSKP
Trigger: TGGTTTTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 90 bp CACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACC +
Preference number: 1 (lower is better)
Translates to: HWEQGRSARTQSYHQ*LGCRTRLDMGPFST
Trigger: GGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTTGACATaGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCA +
Preference number: 1 (lower is better)
Translates to: PSPTTNAWGAEQGLT*ALSPPELDRGWISP
Trigger: TGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp AGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCT +
Preference number: 1 (lower is better)
Translates to: RTRLDMGPFSTGAGS*MDLTTLGCPSTFDA
Trigger: AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 90 bp CGCTCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTaGGAAGCAGAGTTTGGGAAACAGCTGGTTTCAAAACCAATGCCA +
Preference number: 1 (lower is better)
Translates to: RSPRQAERVNSNGCP*EAEFGKQLVSKPMP
Trigger: TGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 2 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPEGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCACTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp AGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCC +
Preference number: 2 (lower is better)
Translates to: SCNSSLQARGPHSGH*STCCNVSRCILCMP
Trigger: GGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCACAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp CCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATC +
Preference number: 2 (lower is better)
Translates to: PGPSPTTNAWGAEQG*TWALSPPELDRGWI
Trigger: GATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: SASQECLCQHSGRRAESPQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCAGCTTCTGTAAAGTaGTCCGATACTCAGTACAAA +
Preference number: 2 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSASVK*SDTQYK
Trigger: TTTGTACTGAGTATCGGAGCACTTTACAGAAGCTGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 90 bp TGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCTCCACCGGA +
Preference number: 2 (lower is better)
Translates to: WEQGRSARTQSYHQC*GCRTRLDMGPFSTG
Trigger: TCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRADRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 2 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCISRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCISPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTESLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 2 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGILSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 2 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 2 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: SLYSASQECLCQHSGRRAHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: YSASQECLCQHSGRRAESHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 2 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 2 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 2 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR TCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 2 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 2 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACGACTGAGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: AEGHWRGKGCRR*RPMPSTTETPL
Trigger: CAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp TGGGACGCCAGCCCTGGGAGCTCATTTCCCGGGGGCTaGGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: WDASPGSSFPGG*GPCAQGVYPPW
Trigger: CCAGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTaGCCCCGGCCGGCAGCTCCTTCTCAAAGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: PLAPLSRGGCGA*PRPAAPSQSKV
Trigger: GACCTTGCTTTGAGAAGGAGCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp ACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCCCTCTGCCACATGGCG +
Preference number: 3 (lower is better)
Translates to: TGEGRAVGAAAR*LARLRPLCHMA
Trigger: CGCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGCTCCTGCCCCGCCCCC +
Preference number: 3 (lower is better)
Translates to: TLSPMGCMAVGL*FPVGTSSCPAP
Trigger: GGGGGCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTGGAAGGTGGGACGCCA +
Preference number: 3 (lower is better)
Translates to: LHALGHGALDSL*CASPHLEGGTP
Trigger: TGGCGTCCCACCTTCCAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGTTTGCTAGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: QLQGPEHRQAGP*QAVISGLLGKR
Trigger: CCTCTTCCCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GVYPPWLKLEARSPRQAECVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: GEGRAVGAAARCLARLRPCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: LAEARGPLPQTG*ACEQQRLPLGS
Trigger: GCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp TCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCGAGGGGCCCGCACAGC +
Preference number: 3 (lower is better)
Translates to: SFLHPSRERTVS*NSSLQARGPHS
Trigger: GCTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TGCAGTTCCCAGGACCCTGGGTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACATGTACCCCACTGGGA +
Preference number: 3 (lower is better)
Translates to: CSSQDPGFGRRT*PWQGLTCTPLG
Trigger: TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp CCTGCGTGGGGCTCTGTTTGGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTGCCGACGCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: PAWGSVWEVDSA*FWGQMLPTPPG
Trigger: GCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTaGCCCCTGCCAGGCGGTCATCAGTGGTTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: TETAARPRAPTG*PLPGGHQWFAR
Trigger: CCTAGCAAACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTaGGAACAAGGACGATCAGCCAGGACCCAGTCCTAC +
Preference number: 3 (lower is better)
Translates to: GLGPGRGSHVPH*EQGRSARTQSY
Trigger: GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACGTCTCTAGGTGCATCCTCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTGATGTGCCAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: TSLGASSACPGT*RSRQSVMCQPP
Trigger: TGGGGGCTGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTaGGATGTCCCAGCACCTTTGATGCTGCCCAACACC +
Preference number: 3 (lower is better)
Translates to: PPELDRGWISPP*DVPAPLMLPNT
Trigger: GGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CTTGACATGGGCCCTTTCTCCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTGGGATGTCCCAGCACC +
Preference number: 3 (lower is better)
Translates to: LDMGPFSTGAGS*MDLTTLGCPST
Trigger: GGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: FSGPCHQWAVWL*GSGSRLAPAPA
Trigger: GGCAGGAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 3 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACATGGGCCCTTTCTCCACCGGAGCTGGATCGTGGATaGATCTCACCACCCTGGGATGTCCCAGCACCTTTG +
Preference number: 3 (lower is better)
Translates to: TWALSPPELDRG*ISPPWDVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp CACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTG +
Preference number: 3 (lower is better)
Translates to: HLATVFSGPCHQ*AVWLWGSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 3 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: PELDRGWISPPWDVPAPLQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 3 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: YSASQECLCQHSGRRAESCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR TCA 72 bp GCGGGGTTCCCACCGCGTGGCCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAGGAATTGTGGCATCTC +
Preference number: 3 (lower is better)
Translates to: AGFPPRGRAEIP*TSPPSKELWHL
Trigger: GAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CTTCTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAA +
Preference number: 3 (lower is better)
Translates to: LLKARSVLSSAP*RAGTVPHCLGK
Trigger: TTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CCACTTGCTGCAACGTCTCTAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCTCGACAGTCTGTGATG +
Preference number: 3 (lower is better)
Translates to: PLAATSLGASSA*PGTWRSRQSVM
Trigger: CATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGGCTTGACATGGGCCCT +
Preference number: 3 (lower is better)
Translates to: QGRSARTQSYHQ*LGCRTRLDMGP
Trigger: AGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp TGCTGCAACGTCTCTAGGTGCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACAGTCTGTGATGTGCCA +
Preference number: 3 (lower is better)
Translates to: CCNVSRCILCMP*DMALSTVCDVP
Trigger: TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp ACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: TVFSGPCHQWAV*LWGSGSRLAPA
Trigger: AGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAACAGAACAGGAATGTAC +
Preference number: 3 (lower is better)
Translates to: DRHTPAQEGARV*ECSLHNRTGMY
Trigger: GTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp CAGCTCGGAGTTGATCTCCCCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTCCCTGGTTTAGTTCTG +
Preference number: 3 (lower is better)
Translates to: QLGVDLPATRMG*YDFRQLPGLVL
Trigger: CAGAACTAAACCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGAGATCAACTCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SPRQAERVNSNG*PWEAEFGKQLV
Trigger: AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CCA 72 bp GACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTGACATGGGCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: DDQPGPSPTTNA*GAEQGLTWALS
Trigger: AGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: PELDRGWISPPWDVPAPLLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCC +
Preference number: 3 (lower is better)
Translates to: ECPCSLYSASQE*LCQHSGRRAES
Trigger: GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 3 (lower is better)
Translates to: QKFLELLPHPRNCGISEGKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: QKFLELLPHPRNCGISEGCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR-3UTR CAA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAATGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 3 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR GCA 72 bp GTGACTAAGATCATGACCACAACTGACAAAGACGTGTaGAGATCCCACGAAAATAGGAACATTTGCTCGACT +
Preference number: 3 (lower is better)
Translates to: VTKIMTTTDKDV*RSHENRNICST
Trigger: AGTCGAGCAAATGTTCCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGTTGTGGTCATGATCTTAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNCRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPLVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSLPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAAGCCCCGCTCCGACTaGGGCCGCAGCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEKPRSD*GRSTDR
Trigger: CCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGGCTT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTATCGGATTCCGTGCCTaGCGCCTCCACCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERIGFRA*RLHLRR
Trigger: TCGCCGCAGGTGGAGGCGCCAGGCACGGAATCCGAT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNTAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSSPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTELPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGGAGGCAGAGAGCCCTaGTCCCACCCCTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARGGREP*SHPSAL
Trigger: CAGGGCTGAGGGGTGGGAGCAGGGCTCTCTGCCTCC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQATAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGAGCTGGATCGTGGATaGATCTCACCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSELDRG*ISPPWD
Trigger: ATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGCCAGCGTTTCGAGCTaGCCCAAGGGAACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEASVSS*PKGTAG
Trigger: GCCAGCGGTTCCCTTGGGCCAGCTCGAAACGCTGGC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCTCCTGCAGCTCCCATaGCCTACGGCCAGCGTTTCG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQALLQLP*PTASVS
Trigger: CGAAACGCTGGCCGTAGGTCATGGGAGCTGCAGGAG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCGGGGCTGGCTGACATaGAAGCCCTCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLRGWLT*KPSAGP
Trigger: GGGCCCGGCAGAGGGCTTGCATGTCAGCCAGCCCCG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCTCCCGCCTCTCTCGTaGATCCTGGCCCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNLPPLS*ILALVL
Trigger: AAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCCGGGGGTGCTCCTTaGGCGAGGCTCGGCCCGATC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPGGAP*ARLGPI
Trigger: GATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR TCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCCGGGGGTGCTCCTTaGGCGAGGCTCGGCCCGATC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGGAP*ARLGPI
Trigger: GATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR TCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGCGGACAGCGTCGCTaGTGGCCAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGGQRR*WPGTGL
Trigger: CAGCCCGGTCCCTGGCCATCAGCGACGCTGTCCGCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCILRQLL*HSRSRL
Trigger: GAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPRSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGATTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGLVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCTCAACTGCCTGCCTaGATGCTTGCCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSQLPA*MLATLL
Trigger: GAGCAGAGTGGCAAGCATGCAGGCAGGCAGTTGAGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLSWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGATGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGCGCGGCGCCAGGCTaGGCTGCGCCGTTTTTATGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGAAPG*AAPFLC
Trigger: GCATAAAAACGGCGCAGCCCAGCCTGGCGCCGCGCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGWGPPF*ETVIPT
Trigger: TGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLARPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCTCCGCCAGCTCTCTaGGCAGCTCCGCGACCTTTC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPPPAL*AAPRPF
Trigger: GAAAGGTCGCGGAGCTGCTCAGAGAGCTGGCGGAGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGCCAGAGAGACACCCTTaGGTCCAGGTCTTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEPERHP*VQVFSP
Trigger: AGGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGG...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTACTGTCGAAGTTCTTaGAGCACCTGCTGGACAATC +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSYCRSS*STCWTI
Trigger: GATTGTCCAGCAGGTGCTTCAAGAACTTCGACAGTA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLRQLL*HSRSRL
Trigger: GAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTRVPRG*SLSEAR
Trigger: CCGAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTTACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAESSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTASWAGL*SCLRLP
Trigger: CGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRSQPS*AGLWSC
Trigger: GCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCTGTCAGCTGGCGGTaGGCTCGGGGCGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQAVSWR*ARGGEA
Trigger: GGCTTCCCCGCCCCGAGCCCACCGCCAGCTGACAGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCAGGTCAGGTTCGAGTaGGCTCCTCCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMQVRFE*APPGLA
Trigger: AGCCAGCCCCGGAGGAGCCCACTCGAACCTGACCTG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYLCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCGTCCTCCTTGGCGCTaGGTGGTGTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYRPPWR*VVWPAV
Trigger: CACTGCCGGCCACACCACTCAGCGCCAAGGAGGACG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTAAGATCATGAAACGGTaGGCCTGGCGTGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERKIMKR*AWRASC
Trigger: GCATGAAGCACGCCAGGCTCACCGTTTCATGATCTT...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCTGGCGCCTCCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPGAST*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGAGGCGCCAGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGGGATCGGATTCCGTaGCTGGCGCCTCCACCTGCG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGDRIP*LAPPPA
Trigger: CGCAGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTCRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRSQRC*SCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCGCTCCAGCTCCTGGTaGTGCCACTGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIRSSSW*CHWRSR
Trigger: GCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGCCGGATGGCAGCATaGTCACACGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRRMAA*SHEGPP
Trigger: TGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTALVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTASGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGGCGCCAGGCTGGGCTaGGCCGTTTTTATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPGARLG*AVFMPR
Trigger: CCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGCATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAEHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAPSFAS*RRLHPR
Trigger: CCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGGGTGGCTTGGGGGCTaGGCCTCGGCCAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMGWLGG*ASASVS
Trigger: CGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTTAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGGCATCTCGGAGGGCTaGACCGGCACACGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAGISEG*TGTRRL
Trigger: GAGCCGGCGTGTGCCGGTCCAGCCCTCCGAGATGCC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACCTGGTTCTTCACCGGTaGGGCGGCTGTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHLVLHR*GGCLGS
Trigger: AGACCCCAGACAGCCGCCCCACCGGTGAAGAACCAG...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPGGAP*AERGSG
Trigger: GCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCTGTGCCCCCGGCCTTaGGAGAGAAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCILCPRP*ERSPRR
Trigger: CCTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCCCGGGGGTGCTCCTTaGGCGAGGCTGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFPGGAP*ARLSSR
Trigger: TCTTGAGCTCAGCCTCGCTCAAGGAGCACCCCCGGG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGCATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTGCCGCAGCTGGCTCTaGAGCTTCTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCICRSWL*SFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTCCAGCTCCTGGTGCTaGCACTGGCGCTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSSSWC*HWRSRS
Trigger: GGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLLSSS*CFRSKD
Trigger: GTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAA...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGCAGGGAGGGGCCTTaGACCTTGAGTCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFGREGP*TLSHGP
Trigger: AGGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCC...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVRQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWALPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGGGCTGAGGACCCTGTaGCCAGGGTGTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQGLRTL*PGCVPA
Trigger: GGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFGDRIP*LAPPPP
Trigger: AGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCC...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCGACCTTTCCCAGCTaGGCCGCCTTGACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMATFPS*AALTGL
Trigger: AAGACCTGTCAAGGCGGCGCAGCTGGGAAAGGTCGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACTGGCTAACAGCTCCTaGAGCTCCCATGACCTACGG +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGLANSS*SSHDLR
Trigger: CCGTAGGTCATGGGAGCTGCAGGAGCTGTTAGCCAG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRARVPRG*SLSEAE
Trigger: CTCAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GEGRAVGAAARCLARLRPSASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLSWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCATGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLACSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCPCHP*WRPPAW
Trigger: CCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGTGGGACGCCAGCCCTaGGAGCTCATTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMVGRQP*ELISRG
Trigger: CCCCCGGGAAATGAGCTCCCAGGGCTGGCGTCCCAC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCTTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGAGCCTGGGGACACCTaGCCACTGTGTTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHEPGDT*PLCSQD
Trigger: GTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCTC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGTGGCCGAGGGGCACTaGCGAGGGAAGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQVAEGH*RGKGCR
Trigger: CCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGCCAC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGCACAGACAGGATCTTaGAGGTCAGCAGCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERAQTGS*RSAARY
Trigger: ATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGGGCTCCTCCGGGGCTaGCTGACATGCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTGLLRG*LTCKPS
Trigger: AGAGGGCTTGCATGTCAGCCAGCCCCGGAGGAGCCC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCTTCTCCTTCTGCCTaGTCACTCGACTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPSPSA*SLDCGG
Trigger: GCCTCCGCAGTCGAGTGACCAGGCAGAAGGAGAAGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCCTCCCCATTTTCACCTaGAAACTGCTGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGLPIFT*KLLNQE
Trigger: CTCCTGGTTCAGCAGTTTTCAGGTGAAAATGGGGAG...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIRSWPT*ELAPPA
Trigger: TGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCG...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAAGGGGCCTTGCACCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGRGLAP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCT...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCCTTGCTGTATTGGCTaGAGCAGCGGGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATPCCIG*SSGSGG
Trigger: CCCTCCAGACCCGCTGCTTCAGCCAATACAGCAAGG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGAGATACTCGCTGCCCTaGAGGGCCCCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAERYSLP*RAPKSR
Trigger: CCTGGATTTGGGGGCCCTTCAGGGCAGCGAGTATCT...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELRQLL*HSRSRL
Trigger: GAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
CDS-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAARKWL*VSSRSS
Trigger: TGACGACCTGCTGGAGACGCACAGCCACTTCCTCGC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSSSSIA*PPGGAA
Trigger: GGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSSSIA*PPGGAA
Trigger: GGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGTACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLAASRS*VAAPAP
Trigger: TGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFQRCCS*RSWLCS
Trigger: GCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQPGAVF*FLRRRS
Trigger: GCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMLVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRALVGIC*CTAACL
Trigger: GAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLCRPCP*HPWWRP
Trigger: CGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGGGCCCTCTCTGCCCATaGCCCCGTGCCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLGPLCP*PRAWLI
Trigger: AATGAGCCAGGCACGGGGGCATGGGCAGAGAGGGCC...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCAGCTTCTGTAAAGTaGTCCGATACTCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSASVK*SDTQYK
Trigger: TTTGTACTGAGTATCGGAGCACTTTACAGAAGCTGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACGACTGAGACCCCTCTaGCACATGGCGGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAERLRPL*HMAGTR
Trigger: CCGCGTCCCCGCCATGTGGCAGAGGGGTCTCAGTCG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACACGGTGAGCCTGGCGTaGTTCATGCCAAAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHTVSLA*FMPKPR
Trigger: GCGAGGTTTTGGCATGAAGCACGCCAGGCTCACCGT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGRVPRG*SLSEAV
Trigger: CACAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617428.4
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTTCCCCTTCTCCTTCTaGCTGGTCACTCGACTGCGG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLFPFSF*LVTRLR
Trigger: CCGCAGTCGAGTGACCAGGCAGAAGGAGAAGGGGAA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAACTGCCTGCCTGCATaGTTGCCACTCTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMNCLPA*LPLCSQ
Trigger: CTGGGAGCAGAGTGGCAAGCATGCAGGCAGGCAGTT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCAAGTCCGGGCTGTTTaGGGGGCCTCGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLQVRAV*GASPVS
Trigger: CGAGACTGGCGAGGCCCCCCAAACAGCCCGGACTTG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGTGCTTCTCCCGCTCCTaGATGGCAGCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQCFSRS*MAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCA...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSWPHAG*QHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGTGGCGCTGAGCAGCTaGATGGGCACATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPVALSS*MGTSLL
Trigger: CAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCAC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQTAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRATAACL*NWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQRPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDARPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLCPCHP*WRPPAW
Trigger: CCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLLMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCTGATGTTCCCTCAGTaGGCCCTGCCCCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDALMFPQ*ALPRGP
Trigger: AGGGCCACGGGGCAGGGCCCACTGAGGGAACATCAG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGAGCCTGGGGACACCTaGCCACTGTGTTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHEPGDT*PLCSQD
Trigger: GTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCTC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCGGCCAGGGACCGGGCTaGGCAGAGTTGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGGQGPG*AELRSS
Trigger: CGACGACCTCAACTCTGCCCAGCCCGGTCCCTGGCC...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCGCCTTGACAGGTCTTaGGACCCTGCCAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRLDRS*DPAKLE
Trigger: CTCCAGCTTGGCAGGGTCCCAAGACCTGTCAAGGCG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGTCCTTCAGATGTGCTaGGCTCTTCCCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARVLQMC*ALPLLL
Trigger: AAGGAGAAGGGGAAGAGCCCAGCACATCTGAAGGAC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
3UTR CAA 72 bp AGCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGTPGHCVLRT*SPMGCMAVGLW
Trigger: CCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACA +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEWGPPF*ETVIPT
Trigger: TGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCA...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAELPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATLPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIRCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDARCSAS*GGAAAP
Trigger: TGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTCCTTTTAGAAGAAGATaGCGTCTTCTTTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GGLDRHTPAQEGARVWECPFRRR*RLLCWR
Trigger: ACGCCAGCAAAGAAGACGTCATCTTCTTCTAAAAGG...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGGGCCTTGCACCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: SRERTVSCNSSLQARGPHRGLAP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCT...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCTCCCCCAGACAGGCTaGGCGTGTGAACAGCAACGG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESLPQTG*ACEQQR
Trigger: CCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGAG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGCTCTCGACAGTCTGTaGTGTGCCAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQALDSL*CASPHL
Trigger: CAGGTGGGGGCTGGCACATCACAGACTGTCGAGAGC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTGGACAGGGCCGGGCTaGCATCGGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCWTGPG*HRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAARKWL*VSSRSS
Trigger: TGACGACCTGCTGGAGACGCACAGCCACTTCCTCGC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPQVHLP*DLPEAL
Trigger: CAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSSSIA*PPGGAA
Trigger: GGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLLRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEAASRS*VAAPAP
Trigger: TGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATAASRS*VAAPAP
Trigger: TGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGCGCGCTCCTCCCGCTaGTTCTCGAAGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIARSSR*FSKLRC
Trigger: GCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACGACAGGCTGGCCCCTaGCAGGCGGTCATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAERQAGP*QAVISG
Trigger: ACCACTGATGACCGCCTGGCAGGGGCCAGCCTGTCG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCTGGCCCCTCCTGGTaGCCTAACCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPGPSW*PNPWLH
Trigger: GTGGAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGATTCTGGGGACAGATaGTGCCGACGCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMDSGDR*CRRHLA
Trigger: GGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGAATC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWASASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCCCAGTGGGCGCCTCTaGCCAGGGGAGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVPSGRL*PGEHFL
Trigger: CAGGAAGTGCTCCCCTGGGCAGAGGCGCCCACTGGG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAAGCCCCGCTCCGACTaGGGCCGCAGCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCKPRSD*GRSTDR
Trigger: CCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGGCTT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGGGCTGTCACATTCCTTaGCTGGGCTCTCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQGCHIP*LGSLRG
Trigger: CCCCCGCAGAGAGCCCAGGCAAGGAATGTGACAGCC...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCACTCTTCTCGTTCTTaGCAGCACCGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPHSSRS*QHRPRS
Trigger: AGAGCGAGGACGGTGCTGGCAAGAACGAGAAGAGTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCCGGAGAAGGTCCCTTaGAACAGCTGGTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLPEKVP*NSWCPL
Trigger: CAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEISLRR*PFSHSL
Trigger: CAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGAT...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCACAGCCCTTTGGATGTaGGCCATCCAGGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATTALWM*AIQAFL
Trigger: CAGGAACGCCTGGATGGCCCACATCCAAAGGGCTGT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAESWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAGGTTCAGGAGCAGCTaGGACAGTGTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRFRSS*DSVWIR
Trigger: GCGGATCCAGACACTGTCCCAGCTGCTCCTGAACCT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGGTTCAGGAGCAGCTaGGACAGTGTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRFRSS*DSVWIR
Trigger: GCGGATCCAGACACTGTCCCAGCTGCTCCTGAACCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTAGGTTCAGGAGCAGCTaGGACAGTGTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARFRSS*DSVWIR
Trigger: GCGGATCCAGACACTGTCCCAGCTGCTCCTGAACCT...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACCAGCCGGTTCTCGGTaGGGGCGCTGTCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTPAGSR*GRCPGE
Trigger: CTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGTGGCGCTGAGCAGCTaGATGGGCACATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVVALSS*MGTSLL
Trigger: CAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCAC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGCCTGCCTCTGGAACTaGTTGGTGGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLACLWN*LVALSS
Trigger: GCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTTGGAGGCCGCCAGCTTaGTGGGGATCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAWRPPA*WGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCA...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPCHPW*RPPAWW
Trigger: CCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSCPCHP*WRPPAW
Trigger: CCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATGGTGTGGCCGGCAGTaGCGAGGGAGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTWCGRQ*RGSWGP
Trigger: GGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCACCTGGCCCCTCCTaGTGCCCTAACCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPPGPS*CPNPWL
Trigger: GAGCCAAGGGTTAGGGCACCAGGAGGGGCCAGGTGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGCTCTGGTTCCCGGTTaGCACCAGCTCCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCALVPG*HQLLPR
Trigger: GCGGGGCAGGAGCTGGTGCCAACCGGGAACCAGAGC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: GPGRGSHVPHWEQGRSAREGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCCATGCACTCCAGCACTaGAGGTTCCAGGCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSHALQH*RFQALN
Trigger: GTTCAAGGCCTGGAACCTCCAGTGCTGGAGTGCATG...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGTCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPLPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGATGACGGGTGGCTTTaGGTCCACAGAAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCDDGWL*VHRSKD
Trigger: GTCTTTGCTTCTGTGGACTCAAAGCCACCCGTCATC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGCTTTTGTAACGAGATaGCGGGTGGCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGAFVTR*RVALSP
Trigger: TGGACTCAAAGCCACCCGTCATCTCGTTACAAAAGC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCAGGGGCCTTGCACCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPRGLAP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCT...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGTGCAGAACAAGGCTTaGCATGGGCCCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSVQNKA*HGPFLH
Trigger: GTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCAC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTACAGCTGGTGCCCATTaGCACACTCCCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLTAGAH*HTPASL
Trigger: GAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGT...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMARKWL*VSSRSS
Trigger: TGACGACCTGCTGGAGACGCACAGCCACTTCCTCGC...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQARKWL*VSSRSS
Trigger: TGACGACCTGCTGGAGACGCACAGCCACTTCCTCGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLARKWL*VSSRSS
Trigger: TGACGACCTGCTGGAGACGCACAGCCACTTCCTCGC...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVSSSIA*PPGGAA
Trigger: GGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTTCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPSAGLS*STALES
Trigger: ACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGA...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHRSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSRSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCCTGGCCGTTGGCGCTaGCCAGCTGCCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVPGRWR*PAACRS
Trigger: TGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLLRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQLRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAAGCTCGGCCCGCTCCTaGTCCAGCCGCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTSSARS*SSRSRS
Trigger: GCTACGCGAGCGGCTGGAGCAGGAGCGGGCCGAGCT...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCTGTCCTCAGCTCCGTaGAGAGCCGGCACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQLSSAP*RAGTVP
Trigger: AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGGTGCATCCTCTGCATaGCCTGGGACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLGASSA*PGTWRS
Trigger: AGAGCGCCATGTCCCAGGGCATGCAGAGGATGCACC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCTAGGTGCATCCTCTaGATGCCCTGGGACATGGCG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSRCIL*MPWDMA
Trigger: CGCCATGTCCCAGGGCATGCAGAGGATGCACCTAGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCTGCGCCGTTTTTATaGCTCGGTGGGATCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMAAPFL*LGGILL
Trigger: TAGAAGGATCCCACCGAGGCATAAAAACGGCGCAGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGAGGCAGCTCAGCCTaGGCTTCACACTGGTACTCT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGGSSA*ASHWYS
Trigger: AGAGTACCAGTGTGAAGCGCAGGCTGAGCTGCCTCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLSYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACACATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALPSFAS*RRLHPR
Trigger: CCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHPSFAS*RRLHPR
Trigger: CCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACCAGCTTCCGTGTTCTaGATGATGCGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVPASVF*MMRSTS
Trigger: GCTGGTGGAGCGCATCATCCAGAACACGGAAGCTGG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSSSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAACTCTGTGCGATCAGCTaGTCTTTCATGCTCAACCGC +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKLCAIS*SFMLNR
Trigger: GCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAG...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCTCTGTGCGATCAGCTaGTCTTTCATGCTCAACCGC +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQLCAIS*SFMLNR
Trigger: GCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTLPPGR*RCPAAC
Trigger: GCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGALCVL*PHAGWQ
Trigger: CTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGTGGCGCTGAGCAGCTaGATGGGCACATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSVALSS*MGTSLL
Trigger: CAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCAC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGAGCTGGATCGTGGATaGATCTCACCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATELDRG*ISPPWD
Trigger: ATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGAGCTGGATCGTGGATaGATCTCACCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPELDRG*ISPPWD
Trigger: ATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTC...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 4 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTGGGCTGTATGGCTGTaGGGCTCTGGTTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIWAVWL*GSGSRL
Trigger: CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAGCCTGGGGACACCTaGCCACTGTGTTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAEPGDT*PLCSQD
Trigger: GTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCTC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGAGCCTGGGGACACCTaGCCACTGTGTTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIEPGDT*PLCSQD
Trigger: GTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGCTC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCEGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACA +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSWGPPF*ETVIPT
Trigger: TGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACATCCATCTCTCCTGTaGTTGGTCCGAGTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPHPSLL*LVRVAS
Trigger: GGACGCAACTCGGACCAATCACAGGAGAGATGGATG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSSPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCATCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPSPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTCACCTGAAAACTGCTaGACCAGGAGGTCGCCGATT +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTASPENC*TRRSPI
Trigger: AATCGGCGACCTCCTGGTTCAGCAGTTTTCAGGTGA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCTTCCGTGTTCTGGATaGTGCGCTCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESLPCSG*CAPPAL
Trigger: CAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGATGACGGGTGGCTTTaGGTCCACAGAAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPDDGWL*VHRSKD
Trigger: GTCTTTGCTTCTGTGGACTCAAAGCCACCCGTCATC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGGCTTTTGTAACGAGATaGCGGGTGGCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMAFVTR*RVALSP
Trigger: TGGACTCAAAGCCACCCGTCATCTCGTTACAAAAGC...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRSWPT*ELAPPA
Trigger: TGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAATGTCACTGTCACTaGGCTTCAAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTECHCH*ASSPGC
Trigger: ACAGCCCGGACTTGAAGCTCAGTGACAGTGACATTC...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQPALPR*SWEGGL
Trigger: CAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCGGATGGGGTGCTATaGTTTCAGACAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLPDGVL*FQTAPW
Trigger: CCAGGGAGCTGTCTGAAATCATAGCACCCCATCCGG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGACAGGCTGAGCGTGTaGACAGCAACGGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSDRLSV*TATVAL
Trigger: AAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGAAAAGGCTGGACACATaGCTTGGGCTCAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLKRLDT*LGLRAR
Trigger: TCTGGCTCTGAGCCCAAGTCATGTGTCCAGCCTTTT...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTGCCTTGCTGCTGAACTaGAGCTCCTCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVALLLN*SSSCRA
Trigger: GGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGC...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMRISSP*RVSDGS
Trigger: GGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCT...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGAGATCAGGCTCTGGATaGCCTCGATCTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLRSGSG*PRSRSW
Trigger: CCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCT...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCRCPAA*RSGSGC
Trigger: GCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTTCCCACGCGTCGACTaGAGCCGGAACTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQFPRVD*SRNCFS
Trigger: GGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAATTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELRCRS*SSSRFP
Trigger: TGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAA...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPLLSSS*CFRSKD
Trigger: GTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALLLSSS*CFRSKD
Trigger: GTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTCTGGGGACAGATGCTaGCGACGCCACCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSGDRC*RRHLAP
Trigger: AGGGGCCAGGTGGCGTCGGCAGCATCTGTCCCCAGA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGILPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTCAGCGTCACAGGAGTaGCTCTGCCAGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSASQE*LCQHSG
Trigger: CCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTCAGCTTCTGTAAAGTaGTCCGATACTCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSASVK*SDTQYK
Trigger: TTTGTACTGAGTATCGGAGCACTTTACAGAAGCTGA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGCCTGGCGTGCTTCATaGCAAAACCTCGCACATGAT +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPAWRAS*QNLAHD
Trigger: ATCATGTGCGAGGTTTTGGCATGAAGCACGCCAGGC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCTGCAGATACTCGCTaGCCTGAAGGGCCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLPADTR*PEGPPN
Trigger: ATTTGGGGGCCCTTCAGGGCAGCGAGTATCTGCAGG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGCCTGGTCACTCGACTaGGGAGGCAGCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIAWSLD*GGSSAC
Trigger: GCAGGCTGAGCTGCCTCCGCAGTCGAGTGACCAGGC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCTTGTCCTTCAGATGTaGTGGGCTCTTCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLLVLQM*WALPLL
Trigger: GAGAAGGGGAAGAGCCCAGCACATCTGAAGGACAAG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCISYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYPSFAS*RRLHPR
Trigger: CCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCTTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTTGAGCGTCCGCACGTaGTGCACCTCTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLLSVRT*CTSVCI
Trigger: GATGCAGACAGAGGTGCACCACGTGCGGACGCTCAA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCAAGCCGCCGCACGATaGAGAAGTTGCCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPQAAAR*RSCQFS
Trigger: AGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATSSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATT +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPTPGR*ADGDRI
Trigger: AATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTAGGTTCAGGAGCAGCTaGGACAGTGTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRARFRSS*DSVWIR
Trigger: GCGGATCCAGACACTGTCCCAGCTGCTCCTGAACCT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCTCCCGCTCCTGGATaGCAGCCCGCTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSPAPG*QPAASP
Trigger: TGGAGACGCAGCGGGCTGCCATCCAGGAGCGGGAGA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTGCTCGTGCCGCAGCTaGCTCTGCAGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCCSCRS*LCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGTGGCGCTGAGCAGCTaGATGGGCACATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQVALSS*MGTSLL
Trigger: CAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCAC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGTGGCGCTGAGCAGCTaGATGGGCACATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFVALSS*MGTSLL
Trigger: CAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCAC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIRPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGILLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCTCCTTGGCGCTGAGTaGTGTGGCCGGCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGLLGAE*CGRQWR
Trigger: TCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCCCACAGAACCTGACTaGAGGGCCACTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAPTEPD*RATDVP
Trigger: GGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCCAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACAGCCCCTTTCACGATaGGCTTCCAAACCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAQPLSR*ASKPTE
Trigger: TTCTGTGGGTTTGGAAGCCCATCGTGAAAGGGGCTG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGACCGGAGCTGGATCGTaGATGGATCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQTGAGS*MDLTTL
Trigger: CAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGGACCTTGTCACCAATaGGCTGTATGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLGPCHQ*AVWLWG
Trigger: GCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAEGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCTCCAACCCAGGAGTaGCCGAGGGGCACTGGCGAG +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTAPTQE*PRGTGE
Trigger: CTCGCCAGTGCCCCTCGGCCACTCCTGGGTTGGAGC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTATCCACTGCTGCTCTTaGTGGCTGAAGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFIHCCS*WLKPQL
Trigger: GAGCTGTGGCTTCAGCCACCAAGAGCAGCAGTGGAT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGGTTCAAAGCAAGGCTaGCCAGTGTTCGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAGSKQG*PVFGGD
Trigger: GTCTCCCCCGAACACTGGCCAGCCTTGCTTTGAACC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCCTGCGCTTCACACTaGTACTCTTGTCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCACASH*YSCHSS
Trigger: AGAAGAGTGACAAGAGTACCAGTGTGAAGCGCAGGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTCCCTTGCAACAGCTaGTGCCCATTGACACACTCC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVPCNS*CPLTHS
Trigger: GGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTGGCTGGGTAGAGCCTaGGATAACCACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPWLGRA*DNHRMT
Trigger: GGTCATTCTGTGGTTATCCCAGGCTCTACCCAGCCA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACGCTGGACACATGACTTaGGCTCAGAGCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHAGHMT*AQSQIE
Trigger: CTCTATCTGGCTCTGAGCCCAAGTCATGTGTCCAGC...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
3UTR CAA 72 bp GGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTTGACATGGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GRSARTQSYHQC*GCRTRLDMGPF
Trigger: GAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
3UTR CAA 72 bp CGCGGGGTTCCCACCGCGTGGCCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAAGGAATTGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: RGVPTAWPSRNS*NFSPIQGIVAS
Trigger: AGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCGCCGATTTTCTGGATaGCATAATTCCGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTRRFSG*HNSGHC
Trigger: GCAGTGACCGGAATTATGTCATCCAGAAAATCGGCG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCCCCATTTTCACCTaGAAACTGCTGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLALPIFT*KLLNQE
Trigger: CTCCTGGTTCAGCAGTTTTCAGGTGAAAATGGGGAG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCTTCTCACACTCACTaGCCTTGGCGTCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPSHTH*PWRPLV
Trigger: CACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGCTTTTGTAACGAGATaGCGGGTGGCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALAFVTR*RVALSP
Trigger: TGGACTCAAAGCCACCCGTCATCTCGTTACAAAAGC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFRSWPT*ELAPPA
Trigger: TGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAAGGGGCCTTGCACCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQRGLAP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCT...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCAGGGGAGCACTTCCTaGTGGAGTTTCCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQQGSTS*WSFPSL
Trigger: AAGGGAGGGGAAACTCCATCAGGAAGTGCTCCCCTG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTTACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQAASRS*VAAPAP
Trigger: TGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGAGAGCCCCTGCTCTTaGCGCCCTTGTCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQESPCS*RPCPCH
Trigger: GTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTC...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTAHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTCACAGGAGTGCCTCTaGCAGCACAGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSQECL*QHSGRR
Trigger: CCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGACATGCAAGCCCTCTaGCGGGCCCCATGGTACTGT +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCDMQAL*RAPWYC
Trigger: ACAGTACCATGGGGCCCGGCAGAGGGCTTGCATGTC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCCTGCCTGCATGCTTaGCACTCTGCTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGACLHA*HSAPSC
Trigger: GCAGCTGGGAGCAGAGTGGCAAGCATGCAGGCAGGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCATCTCTCCTGTGATTaGTCCGAGTTGCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSHLSCD*SELRPR
Trigger: CCTGGGACGCAACTCGGACCAATCACAGGAGAGATG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCTCTGCCACATGGCGATCTTCTACAAAAATaGACTCGGTGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CRRCRPMPSTTETPLPHGDLLQK*TRCLEM
Trigger: CATCTCCAAACACCGAGTCCATTTTTGTAGAAGATC...GCCATGTGGCAGAGGGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGAGTGTCTGGATCCGCTaGACAAGCTCCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQSVWIR*TSSDSR
Trigger: CCTGGAGTCGGAGCTTGTCCAGCGGATCCAGACACT...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQCPCHP*WRPPAW
Trigger: CCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTGGATCTCACCACCCTaGGATGTCCCAGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLWISPP*DVPAPL
Trigger: CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTGAGCTGGATCGTGGATaGATCTCACCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLELDRG*ISPPWD
Trigger: ATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTC...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTCTCCAGGCTCTCCCTTaGTCTTTGCAGGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTLQALP*SLQGVK
Trigger: TTTTACACCCTGCAAAGACCAAGGGAGAGCCTGGAG...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCTTGAACAGGTGGAGTaGGCACTTCCAAACCCGGAG +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLLEQVE*ALPNPE
Trigger: CTCCGGGTTTGGAAGTGCCCACTCCACCTGTTCAAG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
3UTR CAA 72 bp AGTCCTACCACCAATGCTTGGGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCACCGGAGCTGGATCGT +
Preference number: 4 (lower is better)
Translates to: SPTTNAWGAEQG*TWALSPPELDR
Trigger: ACGATCCAGCTCCGGTGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACTCCCCATTTTCACCTaGAAACTGCTGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVLPIFT*KLLNQE
Trigger: CTCCTGGTTCAGCAGTTTTCAGGTGAAAATGGGGAG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLLGVHL*DDIFDE
Trigger: CTCATCAAAGATATCATCTCACAAGTGGACGCCAAG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQRWSCR*SMSSLR
Trigger: CCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCT...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGATGACGGGTGGCTTTaGGTCCACAGAAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQDDGWL*VHRSKD
Trigger: GTCTTTGCTTCTGTGGACTCAAAGCCACCCGTCATC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCCTTTTAGAAGAAGATaGCGTCTTCTTTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPPFRRR*RLLCWR
Trigger: ACGCCAGCAAAGAAGACGTCATCTTCTTCTAAAAGG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGATCATGACCACAACTaGCAAAGACGTGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPDHDHN*QRRVQI
Trigger: GATCTGCACACGTCTTTGTCAGTTGTGGTCATGATC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCGATCATGACCACAACTaGCAAAGACGTGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATDHDHN*QRRVQI
Trigger: GATCTGCACACGTCTTTGTCAGTTGTGGTCATGATC...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCGATCATGACCACAACTaGCAAAGACGTGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSDHDHN*QRRVQI
Trigger: GATCTGCACACGTCTTTGTCAGTTGTGGTCATGATC...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAAATAGTCTAAGATCATaGAACGGTGAGCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTNSLRS*NGEPGV
Trigger: CACGCCAGGCTCACCGTTTCATGATCTTAGACTATT...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTGGACAATCAGCACGTaGTCTGGTTCCACATGGTCT +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFWTIST*SGSTWS
Trigger: AGACCATGTGGAACCAGATCACGTGCTGATTGTCCA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGGATAACCACAGAATaGCCCAATAGCACCTCGACT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGITTE*PNSTST
Trigger: AGTCGAGGTGCTATTGGGTCATTCTGTGGTTATCCC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQLLGVG*IHGEAP
Trigger: TGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSLLSSS*CFRSKD
Trigger: GTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCCCTACAGAAACAGCTaGAAGGCCCAGAGCACCGAC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVPYRNS*KAQSTD
Trigger: GTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCCCCGTGGCCCTCTCTaGCCATGCCCCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSPRGPL*PCPRAW
Trigger: CCAGGCACGGGGGCATGGGCAGAGAGGGCCACGGGG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGTGAACAGCAACGGTTaGCCTTGGGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRVNSNG*PWEAEF
Trigger: AAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCAC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAATGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAECNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCTGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCACTTGTCCACTTGCTaGAACGTCTCTAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWAHLSTC*NVSRCI
Trigger: GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: SLYSASQECLCQHSGRRAQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGTTTCCAGGATCCACTaGTGCTCTTGGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIVSRIH*CSWWLK
Trigger: CTTCAGCCACCAAGAGCAGCAGTGGATCCTGGAAAC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCAATGGACTCGGTGTTTaGAGATGTAAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPNGLGV*RCKGQR
Trigger: TCTCTGTCCCTTACATCTCCAAACACCGAGTCCATT...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTACAAGCCGCCGCACGATaGAGAAGTTGCCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVQAAAR*RSCQFS
Trigger: AGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTG...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCAAGCCGCCGCACGATaGAGAAGTTGCCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRQAAAR*RSCQFS
Trigger: AGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCTCTGTGCGATCAGCTaGTCTTTCATGCTCAACCGC +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESLCAIS*SFMLNR
Trigger: GCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCTGCAGATCAGGCTCTaGATGCCCTCGATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCLQIRL*MPSISL
Trigger: GAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTCCCCGCCACCCGGATaGGGTGCTATGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSPPPG*GAMISD
Trigger: GTCTGAAATCATAGCACCCCATCCGGGTGGCGGGGA...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTATCCTCTGCATGCCCTaGGACATGGCGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCILCMP*DMALST
Trigger: TGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGAT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTCACATGTACCCCACTaGGAACAAGGACGATCAGCC +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSHVPH*EQGRSA
Trigger: GGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAGAAGGACTTGGCCCTaGCAGGGGCTCACATGTACC +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCRRTWP*QGLTCT
Trigger: GGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCACCAATGGGCTGTATaGCTGTGGGGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVHQWAV*LWGSGS
Trigger: GGAACCAGAGCCCCACAGCCATACAGCCCATTGGTG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTCTCGCTCCATTTCCTaGGGAAAGAGCCGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAESRSIS*GKSRKK
Trigger: CTTTTTACGGCTCTTTCCCCAGGAAATGGAGCGAGA...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTCTCTCGTGCATCCTaGCCCTTGTCCTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMLSRAS*PLSFRC
Trigger: ACATCTGAAGGACAAGGGCCAGGATGCACGAGAGAG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTAAGGGAACCGCTGGCTaGGTAGAGCCTGGGATAACC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVKGTAG*VEPGIT
Trigger: GGTTATCCCAGGCTCTACCCAGCCAGCGGTTCCCTT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCGCCGATTTTCTGGATaGCATAATTCCGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLRRFSG*HNSGHC
Trigger: GCAGTGACCGGAATTATGTCATCCAGAAAATCGGCG...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCGCCGATTTTCTGGATaGCATAATTCCGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSRRFSG*HNSGHC
Trigger: GCAGTGACCGGAATTATGTCATCCAGAAAATCGGCG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACGCCGATTTTCTGGATaGCATAATTCCGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQRRFSG*HNSGHC
Trigger: GCAGTGACCGGAATTATGTCATCCAGAAAATCGGCG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCGCCGATTTTCTGGATaGCATAATTCCGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLRRFSG*HNSGHC
Trigger: GCAGTGACCGGAATTATGTCATCCAGAAAATCGGCG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: SPRQAERVNSNGCPWEAELGVHL*DDIFDE
Trigger: CTCATCAAAGATATCATCTCACAAGTGGACGCCAAG...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATLGVHL*DDIFDE
Trigger: CTCATCAAAGATATCATCTCACAAGTGGACGCCAAG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAGATGACGGGTGGCTTTaGGTCCACAGAAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEDDGWL*VHRSKD
Trigger: GTCTTTGCTTCTGTGGACTCAAAGCCACCCGTCATC...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCGATGACGGGTGGCTTTaGGTCCACAGAAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFDDGWL*VHRSKD
Trigger: GTCTTTGCTTCTGTGGACTCAAAGCCACCCGTCATC...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGCTTTTGTAACGAGATaGCGGGTGGCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIAFVTR*RVALSP
Trigger: TGGACTCAAAGCCACCCGTCATCTCGTTACAAAAGC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCAAAACAGCTCGGAGTTaGTCTCCCCGCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIKTARS*SPRHPD
Trigger: ATCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGAAGTGGATTCTGCCTaGTTCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQEVDSA*FWGQML
Trigger: CAGCATCTGTCCCCAGAATCAGGCAGAATCCACTTC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTATGTCCCAGCACCTTTaGTGCTGCCCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVMSQHL*CCPTPP
Trigger: AGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACAT...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCGAGCAGAAATTCCTTaGACTTCTCCCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMRAEIP*TSPPSK
Trigger: CTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAGATCATGACCACAACTaGCAAAGACGTGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: CILCMPWDMALSTVCDVPDHDHN*QRRVQI
Trigger: GATCTGCACACGTCTTTGTCAGTTGTGGTCATGATC...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCTATTGGTCCCCACTGTaGCCATTTACTGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: SASQECLCQHSGRRAESPYWSPL*PFTVEI
Trigger: AATTTCCACAGTAAATGGTCACAGTGGGGACCAATA...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTTCCTCATCCACAGCTaGGGCATCGAGGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQFLIHS*GIEAEP
Trigger: AGGCTCAGCCTCGATGCCTCAGCTGTGGATGAGGAA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSRVPRG*SLSEAR
Trigger: CCGAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAAGCGTCCGCACGTGGTaGACCTCTGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTSVRTW*TSVCIS
Trigger: GCTGATGCAGACAGAGGTGCACCACGTGCGGACGCT...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGISSSIA*PPGGAA
Trigger: GGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGA...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCTCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATSAGLS*STALES
Trigger: ACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGA...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHSAGLS*STALES
Trigger: ACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACACCTCGGGGCGCTCTaGGTACTCTGGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQHLGAL*VLWPHA
Trigger: GGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCAGTCCTACCACCAATaGTTGGGGTGCAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQQSYHQ*LGCRTR
Trigger: CCTTGTTCTGCACCCCAAGCATTGGTGGTAGGACTG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAAAATAGGAACATTTaGTCGACTGTCAACTTTACA +
Preference number: 4 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAENRNI*STVNFT
Trigger: TGTAAAGTTGACAGTCGAGCAAATGTTCCTATTTTC...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTACTGACAAAGACGTGTaGAGATCCCACGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPTDKDV*RSHENR
Trigger: CCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAACTGACAAAGACGTGTaGAGATCCCACGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: GTRRLRRVPGSGNVLFTTTDKDV*RSHENR
Trigger: CCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGT...TGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAACTGACAAAGACGTGTaGAGATCCCACGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLATDKDV*RSHENR
Trigger: CCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGT...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCATGCTTGCCACTCTaGTCCCAGCTGCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGACLPL*SQLQAN
Trigger: ATTGGCCTGCAGCTGGGAGCAGAGTGGCAAGCATGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCTCAGTTCTTCAACCTaGAGGCACCTAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGLSSST*RHLAWL
Trigger: TAGCCAGGCTAGGTGCCTGCAGGTTGAAGAACTGAG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTAATGGACTCGGTGTTTaGAGATGTAAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPNGLGV*RCKGQR
Trigger: TCTCTGTCCCTTACATCTCCAAACACCGAGTCCATT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCAAGCCGCCGCACGATaGAGAAGTTGCCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLQAAAR*RSCQFS
Trigger: AGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAAGCCGCCGCACGATaGAGAAGTTGCCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIQAAAR*RSCQFS
Trigger: AGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVPPSSA*PLALPS
Trigger: GCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCAGCTGGGACAGTGTCTaGATCCGCTGGACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSWDSV*IRWTSS
Trigger: GGAGCTTGTCCAGCGGATCCAGACACTGTCCCAGCT...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCAGGTTCAGGAGCAGCTaGGACAGTGTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGRFRSS*DSVWIR
Trigger: GCGGATCCAGACACTGTCCCAGCTGCTCCTGAACCT...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAATCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQSWCCH*RSRSQR
Trigger: GCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGGTGCCAGCCCCCACCTaGAAGGTGGGACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVVPAPT*KVGRQP
Trigger: GGGCTGGCGTCCCACCTTCCAGGTGGGGGCTGGCAC...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCATGCCCTGGGACATaGCGCTCTCGACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTACPGT*RSRQSV
Trigger: CACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCCTACCACCAATGCTTaGGGTGCAGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQPTTNA*GAEQGL
Trigger: CAAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATTCGGGAGAAGGACTTaGCCCTGGCAGGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTFGRRT*PWQGLT
Trigger: TGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCTTCAGCCCTCCTCCTaGCAGGTTCAAAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVLQPSS*QVQSKA
Trigger: AGCCTTGCTTTGAACCTGCCAGGAGGAGGGCTGAAG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGCTTTTGTAACGAGATaGCGGGTGGCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQAFVTR*RVALSP
Trigger: TGGACTCAAAGCCACCCGTCATCTCGTTACAAAAGC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCGATCATGACCACAACTaGCAAAGACGTGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: YSASQECLCQHSGRRAESDHDHN*QRRVQI
Trigger: GATCTGCACACGTCTTTGTCAGTTGTGGTCATGATC...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSAGLS*STALES
Trigger: ACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGTGGGGATCTGCTGCTaGACGGCCGCCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSVGICC*TAACLW
Trigger: CCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCAC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAAAGGGCTGTCGGCGCTaGCGCCCGATGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQKGCRR*RPMPST
Trigger: CGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCCTACAGAAACAGCTGCAAGGCCCAGAGCACCGACAGGCTGGCCCCTGCCAGGGAAAATAGGAACATTTaGTCGACTGTCAACTTTACA +
Preference number: 4 (lower is better)
Translates to: PYRNSCKAQSTDRLAPARENRNI*STVNFT
Trigger: TGTAAAGTTGACAGTCGAGCAAATGTTCCTATTTTC...CCTGGCAGGGGCCAGCCTGTCGGTGCTCTGGGCCTTGCAGCTGTTTCTGTAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACACTGACAAAGACGTGTaGAGATCCCACGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYTDKDV*RSHENR
Trigger: CCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGT...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSRVPRG*SLSEAV
Trigger: CACAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR GCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCATGGTCTTTTTCCATaGACTCCAGCACTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLHGLFP*TPALEV
Trigger: AACCTCCAGTGCTGGAGTGCATGGAAAAAGACCATG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAATGGACTCGGTGTTTaGAGATGTAAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFNGLGV*RCKGQR
Trigger: TCTCTGTCCCTTACATCTCCAAACACCGAGTCCATT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSSASNS*PSDSIS
Trigger: TGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCT +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVSPGVS*RGPRPP
Trigger: AGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACT...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCTCTGTGCGATCAGCTaGTCTTTCATGCTCAACCGC +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVLCAIS*SFMLNR
Trigger: GCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVGRQRA*RGVLLL
Trigger: AAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCC...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGGGGAAGCCAGGGTCTaGTGGGGGCGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQGEARV*WGRRTV
Trigger: CACAGTCCTGCGCCCCCACCAGACCCTGGCTTCCCC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCATGGTGAACCTGCGTaGGGCTCTGTTTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQHGEPA*GSVWEV
Trigger: CACTTCCCAAACAGAGCCCCACGCAGGTTCACCATG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACAGTTCCCAGGACCCTaGGTTCGGGAGAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTQFPGP*VREKDL
Trigger: CAAGTCCTTCTCCCGAACCCAGGGTCCTGGGAACTG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCCATCCAAGGAATTGTaGCATCTCGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQPSKEL*HLGGLD
Trigger: GTCCAGCCCTCCGAGATGCCACAATTCCTTGGATGG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCTTTTAGAAGAAGATaGCGTCTTCTTTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPFRRR*RLLCWR
Trigger: ACGCCAGCAAAGAAGACGTCATCTTCTTCTAAAAGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGTGATTGGTCCGAGTTaGGTCCCAGGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQVIGPS*VPGPAG
Trigger: CCCGGCTGGCCCTGGGACGCAACTCGGACCAATCAC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASAGLS*STALES
Trigger: ACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCAGCTTCTGTAAAGTaGTCCGATACTCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSASVK*SDTQYK
Trigger: TTTGTACTGAGTATCGGAGCACTTTACAGAAGCTGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCTAGAAAACAGAGCTaGGTCTTCCCTTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSRKQS*VFPCCI
Trigger: AATACAGCAAGGGAAGACGCAGCTCTGTTTTCTAGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGGGCGCCTCCACCACCTaGGGCGATTCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVGASTT*GDSSEL
Trigger: GAGCTCTGAGGAATCGCCGCAGGTGGTGGAGGCGCC...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSSRARC*LGTPFL
Trigger: CAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTAATGGACTCGGTGTTTaGAGATGTAAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDANGLGV*RCKGQR
Trigger: TCTCTGTCCCTTACATCTCCAAACACCGAGTCCATT...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGATCTTCTACAAAAATaGACTCGGTGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPDLLQK*TRCLEM
Trigger: CATCTCCAAACACCGAGTCCATTTTTGTAGAAGATC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTCAAGCGCCCTGATGTaGTCTTCCAGCATAGCATGC +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSSALM*SSSIAC
Trigger: GCATGCTATGCTGGAAGACCACATCAGGGCGCTTGA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQRPPAW*GSAAAR
Trigger: CCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCTGGTGCCCTAACCCTTaGCTCCACTGTCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSWCPNP*LHCRAA
Trigger: CGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCA...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLASLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTTTTTATGCCTCGGTaGGATCCTTCTAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFVFMPR*DPSRKQ
Trigger: CTGTTTTCTAGAAGGATCCCACCGAGGCATAAAAAC...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGCACAGACAGGATCTTaGAGGTCAGCAGCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCAQTGS*RSAARY
Trigger: ATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGC...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCCAGAGTCAAAAGGCTaGACACATGACTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVPESKG*THDLGS
Trigger: TGAGCCCAAGTCATGTGTCCAGCCTTTTGACTCTGG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCTCCCCATTTTCACCTaGAAACTGCTGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QKFLELLPHPRNCGISEGLPIFT*KLLNQE
Trigger: CTCCTGGTTCAGCAGTTTTCAGGTGAAAATGGGGAG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACTTGGCGTCCACTTGTaGGATGATATCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELGVHL*DDIFDE
Trigger: CTCATCAAAGATATCATCTCACAAGTGGACGCCAAG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGAGCTCTCCCAGCGCTaGGAGCCCCTGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNELSQR*EPLLLP
Trigger: CGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: APFLTASEKQLGVDLPATRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSSAESP*SCRPCP
Trigger: AGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCACCAATGCTTGGGGTaGAGAACAAGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQHQCLG*RTRLDM
Trigger: CATGTCAAGCCTTGTTCTGCACCCCAAGCATTGGTG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGGCGCTGCCGCCCGATaGCTAGCACGACTGAGACCC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNGAAAR*LARLRP
Trigger: GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSQVVSA*EEAANG
Trigger: GCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTG...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACACTCTGTGCGATCAGCTaGTCTTTCATGCTCAACCGC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTLCAIS*SFMLNR
Trigger: GCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAG...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGTGGGCACATCGCTCTTaGCCAGCCGGTTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVWAHRS*PAGSRW
Trigger: CCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCA...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGAAGCCAGGGTCTGGTaGGGGCGCAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSEARVW*GRRTVS
Trigger: AGACACAGTCCTGCGCCCCCACCAGACCCTGGCTTC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTAGTTTGGGAAACAGCTaGTTTCAAAACCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFSLGNS*FQNQCQ
Trigger: TTGGCATTGGTTTTGAAACCAGCTGTTTCCCAAACT...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGAGGGTGCCAGGGTCTaGGAATGTTCTCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTEGARV*ECSLHN
Trigger: GTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTC...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGTCACATTCCTTGCCTaGGCTCTCTGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQVTFLA*ALCGGP
Trigger: GGGACCCCCGCAGAGAGCCCAGGCAAGGAATGTGAC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVLGVHL*DDIFDE
Trigger: CTCATCAAAGATATCATCTCACAAGTGGACGCCAAG...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCTTTTAGAAGAAGATaGCGTCTTCTTTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPFRRR*RLLCWR
Trigger: ACGCCAGCAAAGAAGACGTCATCTTCTTCTAAAAGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCATTAAAAACTTTCCTTaGGTCACGGCCCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTIKNFP*VTALLE
Trigger: TTCTAAAAGGGCCGTGACTCAAGGAAAGTTTTTAAT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGTGGTGGGGCTGTTTGTaGAGTCGTAGCCCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVWWGCL*SRSPRR
Trigger: CCTTCGCGGGCTACGACTGCACAAACAGCCCCACCA...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQDCSRN*FSRSWM
Trigger: CATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNSLVGI*CCTAAC
Trigger: GCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCT...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACCTGCCCATGCCCCCGTaGCTGGCTCATTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNLPMPP*LAHSLT
Trigger: GGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAG...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGAAAATAGGAACATTTaGTCGACTGTCAACTTTACA +
Preference number: 4 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALENRNI*STVNFT
Trigger: TGTAAAGTTGACAGTCGAGCAAATGTTCCTATTTTC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATTCCTCTTTCTCAACTaGCTGCCTGCATGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTFLFLN*LPACLP
Trigger: TGGCAAGCATGCAGGCAGGCAGTTGAGAAAGAGGAA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGGTGTGTACCCGCCCTaGCTGAAGCTAGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNGVYPP*LKLEAR
Trigger: GCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCAATCAGCACGTGATCTaGTTCCACATGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFNQHVI*FHMVFF
Trigger: GAAAAAGACCATGTGGAACCAGATCACGTGCTGATT...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVRSWPT*ELAPPA
Trigger: TGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNRAAVP*GALIFP
Trigger: GGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCG...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCCTTTTAGAAGAAGATaGCGTCTTCTTTGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIPFRRR*RLLCWR
Trigger: ACGCCAGCAAAGAAGACGTCATCTTCTTCTAAAAGG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNRRMHS*TPSRRT
Trigger: CGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCT...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVAASRS*VAAPAP
Trigger: TGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGC...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNCCTAA*LWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCA...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGGCACCGTTCCTCACTaGCTCGGAAAAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQGTVPH*LGKTAR
Trigger: CCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGAAAATAGGAACATTTaGTCGACTGTCAACTTTACA +
Preference number: 4 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVENRNI*STVNFT
Trigger: TGTAAAGTTGACAGTCGAGCAAATGTTCCTATTTTC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCTCATACCGACATTCCTaGACAGGGCCGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSSYRHS*TGPGCH
Trigger: ATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGA...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNSRARK*LCVSSR
Trigger: CCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCT...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACCATCTGTCCCCGAGTaGCGGGAATGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQPSVPE*RECPCS
Trigger: TGAACAGGGACATTCCCGCCACTCGGGGACAGATGG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACATGGCTGTGGGGCTCTaGTTCCCGGTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNMAVGL*FPVGTS
Trigger: GCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCAT...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACTGAAGCAGCGGGTCTaGAGGGCAGGATATTGGTCC +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQLKQRV*RAGYWS
Trigger: GGACCAATATCCTGCCCTCCAGACCCGCTGCTTCAG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR TCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGGAGGTTCCAGGCCTTaGACAGGTGGAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNGGSRP*TGGVGT
Trigger: AGTGCCCACTCCACCTGTTCAAGGCCTGGAACCTCC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCATAATTCCGGTCACTaGCCTCCTCCAGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHNSGH*PPPGTP
Trigger: AGGAGTCCCTGGAGGAGGGCAGTGACCGGAATTATG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAATACATCTCCGGCCCTTaGAAGGAGGCGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQYISGP*KEALIR
Trigger: TCTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTA...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGGCCACCCGGATGGGGTaGTATGATTTCAGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVATRMG*YDFRQL
Trigger: GAGCTGTCTGAAATCATAGCACCCCATCCGGGTGGC...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAATGCAACGTCTCTAGGTaGATCCTCTGCATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQCNVSR*ILCMPW
Trigger: CCAGGGCATGCAGAGGATGCACCTAGAGACGTTGCA...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGTTTCCCCTCCCTTGTaGCCATCTGTCCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNVSPPL*PSVPEW
Trigger: CCACTCGGGGACAGATGGGCACAAGGGAGGGGAAAC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTGATCTTCTACAAAAATaGACTCGGTGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVDLLQK*TRCLEM
Trigger: CATCTCCAAACACCGAGTCCATTTTTGTAGAAGATC...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAACCAGGCGGTCATCAGTaGTTTGCTAGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQPGGHQ*FAREEE
Trigger: CTCCTCTTCCCTAGCAAACCACTGATGACCGCCTGG...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGGGGTTCCCACCGCGTaGCCGAGCAGAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNGVPTA*PSRNSL
Trigger: CAAGGAATTTCTGCTCGGCCACGCGGTGGGAACCCC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVKLVAV*LNLTPQ
Trigger: CTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTT...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNFSKLR*RSCSSS
Trigger: GCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAA...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGAACGGACCGTAAGCTaGAACAGCTCACTACAAGCG +
Preference number: 4 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQERTVS*NSSLQA
Trigger: CGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCAGGTCTTGGGACCCTaGCAAGCTGGAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVQVLGP*QAGEKR
Trigger: TCTCTTTTCTCCAGCTTGGCAGGGTCCCAAGACCTG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGATCTTCTACAAAAATaGACTCGGTGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIDLLQK*TRCLEM
Trigger: CATCTCCAAACACCGAGTCCATTTTTGTAGAAGATC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSALHQH*VFGYAL
Trigger: CAACGCATAACCAAATACCCAGTGCTGGTGGAGCGC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCAGAAATATCCCGCAGTaGGGAAATGTTGTAATCATT +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIRNIPQ*GNVVII
Trigger: AATGATTACAACATTTCCTCACTGCGGGATATTTCT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR TCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACCCTCCATACTCTCGCTaGGCCGCCTGGGAAAATCAT +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNPPYSR*AAWENH
Trigger: ATGATTTTCCCAGGCGGCTCAGCGAGAGTATGGAGG...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGGCAGAGAAGAAGTCTaGGTTCTCAGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSGREEV*VLRFPG
Trigger: TCCTGGAAACCTGAGAACCCAGACTTCTTCTCTGCC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR GCA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGAAAATAGGAACATTTaGTCGACTGTCAACTTTACA +
Preference number: 4 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIENRNI*STVNFT
Trigger: TGTAAAGTTGACAGTCGAGCAAATGTTCCTATTTTC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACTTTCTCCACCGGAGCTaGATCGTGGATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNFLHRS*IVDGSH
Trigger: GTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAA...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR GCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCACTGACAAAGACGTGTaGAGATCCCACGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSTDKDV*RSHENR
Trigger: CCTATTTTCGTGGGATCTGCACACGTCTTTGTCAGT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGAATGGACTCGGTGTTTaGAGATGTAAGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVNGLGV*RCKGQR
Trigger: TCTCTGTCCCTTACATCTCCAAACACCGAGTCCATT...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGTTTCAGACAGCTCCCTaGTTTAGTTCTGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVFQTAP*FSSGST
Trigger: AGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAA...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CCA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCTGTGACCATTTACTGTaGAAATTGCAGTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSCDHLL*KLQYLL
Trigger: CAGCAAATACTGCAATTTCCACAGTAAATGGTCACA...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CCA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGATCTTCTACAAAAATaGACTCGGTGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNDLLQK*TRCLEM
Trigger: CATCTCCAAACACCGAGTCCATTTTTGTAGAAGATC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TCCTGCAGCCGCGCGCCCGCACGCTCCAGCTCCTGGTGCTGCCACTaGCGCTCGCGCTCCCAGCGCTGCTGCTCGTGCCGCAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SCSRAPARSSSWCCH*RSRSQRCCSCRSWL
Trigger: GAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCGTGCGGGCGCGCGGCTGCAGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp CCAGTGTGTCGGGCGGCAGCGCGCCTGGCGCGGTGTTCTGCTTCTTaGGGCGGCGCAGCAGCTCCAGGCGCTCCCGCTCGCGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: PVCRAAARLARCSAS*GGAAAPGAPARAPR
Trigger: CCGTGGAGCGCGAGCGGGAGCGCCTGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGACACACTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp GCTTGGGGGCTGGGCCTCGGCCAGTGTGTCGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTTGAGGCGGCGCAGCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AWGLGLGQCVGRQRA*RGVLLLEAAQQLQA
Trigger: CGCCTGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGACACACTGGCCGAGGCCCAGCCCCCAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp TCCAGCTCCTGGTGCTGCCACTGGCGCTCGCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTCTGCAGCTTCTCCAGGGCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: SSSWCCHWRSRSQRC*SCRSWLCSFSRAAR
Trigger: GCGCGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp CGCTCCAGCTCCTGGTGCTGCCACTGGCGCTCGCGCTCCCAGCGCTaGTGCTCGTGCCGCAGCTGGCTCTGCAGCTTCTCCAGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RSSSWCCHWRSRSQR*CSCRSWLCSFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGAGCTGGAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp GTCCTCCTTGGCGCTGAGTGGTGTGGCCGGCAGTGGCGAGGGAGCTaGGGGCCCGGGCAGGAGGGCTGTGCCCCCGGCCTTGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VLLGAEWCGRQWRGS*GPGQEGCAPGLERE
Trigger: TTCTCTCTCAAGGCCGGGGGCACAGCCCTCCTGCCCGGGCCCCCAGCTCCCTCGCCACTGCCGGCCACACCACTCAGCGCCAAGGAGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGCCTCTGGAACTGGTaGGTGGCGCTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSCLWNW*VALSSW
Trigger: CCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TGCAGTCGTAGCCCGCGAAGGTCTCAGCCCTCCTGGGCGGGCCTGTaGAGCTGCCTCCGTCTTCCGCCTGGCCGTTGGCGCTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CSRSPRRSQPSWAGL*SCLRLPPGRWRCPA
Trigger: AGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCTTCGCGGGCTACGACTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCAGGCGGCCAATGGCCTaGCTGCTGAACTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSRRPMA*LLNCSS
Trigger: GGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCT...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNSSAWP*ALPSCL
Trigger: CAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGA...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 5 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TCCTGGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGCAGATCAGGCTCTGGATGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: SWAGLWSCLRLPPGR*RCPAACRSGSGCPR
Trigger: TCGAGGGCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TCAGCCCTCCTGGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGCTGCCTGCAGATCAGGCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: SALLGGPVELPPSSA*PLALPSCLQIRLWM
Trigger: CATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGAGGGCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GEGRAVGAAARCLARLRPAVFCF*RRRSSS
Trigger: GGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGC...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp CGGATGGCAGCATGCTCACACGAGGGCCCTCCAGCCCTTCCCCGTTaGAGCTGGGAGGGTGGCTTGGGGGCTGGGCCTCGGCCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: RMAACSHEGPPALPR*SWEGGLGAGPRPVC
Trigger: ACACACTGGCCGAGGCCCAGCCCCCAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGAGGGCCCTCGTGTGAGCATGCTGCCATCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp GCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCACGCGTCGACTGCAGCCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: AARSSRCFSKLRCRS*SSSRFPRVDCSRNC
Trigger: GCAGTTCCGGCTGCAGTCGACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TGGGGCTGTTTGTGCAGTCGTAGCCCGCGAAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTTGG +
Preference number: 5 (lower is better)
Translates to: WGCLCSRSPRRSQPS*AGLWSCLRLPPGRW
Trigger: CCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCTTCGCGGGCTACGACTGCACAAACAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp AGCGCTGAGAGCCCCTGCTCTTGCCGCCCTTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTGCTGCACGGCCG +
Preference number: 5 (lower is better)
Translates to: SAESPCSCRPCPCHP*WRPPAWWGSAAARP
Trigger: CGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACCCCGGGGGTGCTCCTaGAGCGAGGCTCGGCCCGAT +
Preference number: 5 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGPRGCS*SEARPD
Trigger: ATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGGG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCACCACCTCCCTCTTTaGCTTCTTGGCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSHHLPL*LLGVGC
Trigger: GCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCATCGCTTTCTCCTCGTaGGCCACTTCCCTCACGATG +
Preference number: 5 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSIAFSS*ATSLTM
Trigger: CATCGTGAGGGAAGTGGCCAACGAGGAGAAAGCGAT...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp GTCCCAGGGCCAGCCGGGCTCGGTGTTGGCTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACATTCCTGGACAGGGCCGGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: VPGPAGLGVGWGPPF*ETVIPTFLDRAGLP
Trigger: TGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTGGCCCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp GTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTTGGCGCTGCCCAGCTaGCTGCAGATCAGGCTCTGGATGCCCTCGATCTCGCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: VELPPSSAWPLALPS*LQIRLWMPSISLMA
Trigger: GGCCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp TTCTCCAGGGCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGCAGGTTCCCACGCGTCGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: FSRAARSSRCFSKLR*RSCSSSRFPRVDCS
Trigger: GCTGCAGTCGACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGCCCTGGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp GCAGCTTCTCCAGGGCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCAGCAGCAGGTTCCCACGCGTCGACT +
Preference number: 5 (lower is better)
Translates to: AASPGPRAPPAASRS*VAAPAPAAGSHAST
Trigger: AGTCGACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGCCCTGGAGAAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp GTGGAGGCCGCCAGCTTGGTGGGGATCTGCTGCTGCACGGCCGCCTaGCTCTGGAACTGGTTGGTGGCGCTGAGCAGCTGGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: VEAASLVGICCCTAA*LWNWLVALSSWMGT
Trigger: TGTGCCCATCCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp TCCTTGCCACCCTTGGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTCTGGAACTGGTTGGTGGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLPPLVEAASLVGIC*CTAACLWNWLVALS
Trigger: GCTCAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp CTGGACAGGGCCGGGCTGCCATCGGACAGGAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGTGACAGAGGCAAGGACAGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LDRAGLPSDRRVPRG*SLSEAVTEARTELV
Trigger: CACCAACTCTGTCCTTGCCTCTGTCACAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS CCA 90 bp TCCTCCAGGGACTCCTGGCGGCGCTCCTTGAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGGTCGTCAGCGCATGGGAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SSRDSWRRSLSRARK*LCVSSRSSAHGKRR
Trigger: CCGCCTCTTCCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTCCCTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp GCCGCCAGCTTGGTGGGGATCTGCTGCTGCACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTGAGCAGCTGGATGGGCACATCGCTC +
Preference number: 5 (lower is better)
Translates to: AASLVGICCCTAACL*NWLVALSSWMGTSL
Trigger: GAGCGATGTGCCCATCCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TGCCGCCCTTGTCCTTGCCACCCTTGGTGGAGGCCGCCAGCTTGGTaGGGATCTGCTGCTGCACGGCCGCCTGCCTCTGGAACTGGTTGG +
Preference number: 5 (lower is better)
Translates to: CRPCPCHPWWRPPAW*GSAAARPPASGTGW
Trigger: CCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGTGCCTCTGGAACTGGTaGGTGGCGCTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTECLWNW*VALSSW
Trigger: CCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCA...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCCAGAGAGACACCCTaGAGTCCAGGTCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPRETP*SPGLQP
Trigger: GGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS TCA 90 bp TCTGCTGCTGCACGGCCGCCTGCCTCTGGAACTGGTTGGTGGCGCTaGGCAGCTGGATGGGCACATCGCTCTTGGCCAGCCGGTTCTCGG +
Preference number: 5 (lower is better)
Translates to: SAAARPPASGTGWWR*AAGWAHRSWPAGSR
Trigger: CCGAGAACCGGCTGGCCAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp AGGGACTCCTGGCGGCGCTCCTTGAGCCGAGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCAGCGCATGGGAAGAGGCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: RDSWRRSLSRARKWL*VSSRSSAHGKRRPM
Trigger: CATTGGCCGCCTCTTCCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp AGCTGCCTCCGTCTTCCGCCTGGCCGTTGGCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGCCCTCGATCTCGCTCATGGCCGACT +
Preference number: 5 (lower is better)
Translates to: SCLRLPPGRWRCPAA*RSGSGCPRSRSWPT
Trigger: AGTCGGCCATGAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp TTGTCCTTGCCACCCTTGGTGGAGGCCGCCAGCTTGGTGGGGATCTaGTGCTGCACGGCCGCCTGCCTCTGGAACTGGTTGGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSLPPLVEAASLVGI*CCTAACLWNWLVAL
Trigger: CAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp AGCTCTCCCAGCGCTGAGAGCCCCTGCTCTTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSPSAESPCSCRPCP*HPWWRPPAWWGSAA
Trigger: AGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp GCTTCAGGTCGAAGGACGCTGAGCTCTCCCAGCGCTGAGAGCCCCTaGTCTTGCCGCCCTTGTCCTTGCCACCCTTGGTGGAGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: ASGRRTLSSPSAESP*SCRPCPCHPWWRPP
Trigger: TGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCTGGGAGAGCTCAGCGTCCTTCGACCTGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp CACAGGGGGCAGCTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTaGTGCCCATTGACACACTCCCGCCTCTCTCGTGCATCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: HRGQLEGPEKVPCNS*CPLTHSRLSRASWP
Trigger: GGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTGCCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGCAGCCGGGCTCGGTGTaGGCTGGGGACCCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARQPGSV*AGDPLS
Trigger: AGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTG...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCTCACACTCACTGACCTaGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSSHSLT*ASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGA...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLSSAWP*ALPSCL
Trigger: CAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGA...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNLLEVA*PLLLQQ
Trigger: CTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTELLEVA*PLLLQQ
Trigger: CTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAG...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCGCTGCTTCTCGAAGTaGCGTTGCCGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPRCFSK*RCRSCS
Trigger: GGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTTTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QGVYPPWLKLEARSPRQALSLPP*VEAASL
Trigger: CAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGCTGTGCCCCCGGCCTaGAGAGAGAAGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARAVPPA*REKPSE
Trigger: CTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAGC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 5 (lower is better)
Translates to: SRERTVSCNSSLQARGPHGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 5 (lower is better)
Translates to: SASQECLCQHSGRRAESPGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp AATTCCGGTCACTGCCCTCCTCCAGGGACTCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGCTGTGCGTCTCCAGCAGGTCGTCAG +
Preference number: 5 (lower is better)
Translates to: NSGHCPPPGTPGGAP*AERGSGCASPAGRQ
Trigger: CTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTCCCTGGAGGAGGGCAGTGACCGGAATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp AGGGGGCAGCTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTGGTaGCCATTGACACACTCCCGCCTCTCTCGTGCATCCTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: RGQLEGPEKVPCNSW*PLTHSRLSRASWPL
Trigger: CAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPSSAWP*ALPSCL
Trigger: CAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTTCTTGGTGGGGCTGTTaGTGCAGTCGTAGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPSWWGC*CSRSPR
Trigger: TCGCGGGCTACGACTGCACAAACAGCCCCACCAAGA...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTGGAGGCCGCCAGCTaGGTGGGGATCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVEAAS*VGICCC
Trigger: GCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTGGAGGCCGCCAGCTaGGTGGGGATCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVEAAS*VGICCC
Trigger: GCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGGAGGGGCCTTGCACCTaGAGTCACGGCCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: HWRGKGCRRCRPMPSTTEEGPCT*SHGPFR
Trigger: TCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCTC...CTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTCCCCCATCCAAGGAATaGTGGCATCTCGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPPPSKE*WHLGGL
Trigger: CAGCCCTCCGAGATGCCACAATTCCTTGGATGGGGG...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCCCAGCTGCGCCGCCTaGACAGGTCTTGGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMPSCAA*TGLGTL
Trigger: CAGGGTCCCAAGACCTGTCAAGGCGGCGCAGCTGGG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAGGGCTGTCACATTCCTaGCCTGGGCTCTCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGGLSHS*PGLSAG
Trigger: CCCCGCAGAGAGCCCAGGCAAGGAATGTGACAGCCC...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCACTCTTCTCGTTCTaGCCAGCACCGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: GGLDRHTPAQEGARVWECSLFSF*PAPSSL
Trigger: GAGCGAGGACGGTGCTGGCAAGAACGAGAAGAGTGA...ACATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS TCA 90 bp TTGCCTGGGCTCTCTGCGGGGGTCCCGCCCCCAGAGAGACACCCTTaGGTCCAGGTCTTCAGCCCTCCTCCTGGCAGGTTCAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LPGLSAGVPPPERHP*VQVFSPPPGRFKAR
Trigger: CCTTGCTTTGAACCTGCCAGGAGGAGGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGGGGGCGGGACCCCCGCAGAGAGCCCAGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 90 bp GCTCCGGGACCCGGCGCGGCGCCAGGCTGGGCTGCGCCGTTTTTATaGCTCGGTGGGATCCTTCTAGAAAACAGAGCTGCGTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: APGPGAAPGWAAPFL*LGGILLENRAASSL
Trigger: AAGGGAAGACGCAGCTCTGTTTTCTAGAAGGATCCCACCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCCGCGCCGGGTCCCGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS GCA 90 bp GGTTTGCCACACAGGGGGCAGCTGGAGGGGCCGGAGAAGGTCCCTTaGAACAGCTGGTGCCCATTGACACACTCCCGCCTCTCTCGTGCA +
Preference number: 5 (lower is better)
Translates to: GLPHRGQLEGPEKVP*NSWCPLTHSRLSRA
Trigger: TGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTGCCCCCTGTGTGGCAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 90 bp CCGAGCGAGGAAGTGGCTGTGCGTCTCCAGCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGCCTTGCTGCTGAACTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PSEEVAVRLQQVVSA*EEAANGLAAELQLL
Trigger: GAGGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTGGCCCCGGCCGGCAGCCGCACGATGGAGAAGTaGCCAATTTTCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: TLGSTVARRLWSVAPAGSRTMEK*PIFLIK
Trigger: CTTGATCAAGAAAATTGGCAACTTCTCCATCGTGCG...GCTGCCGGCCGGGGCCACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQAVFCF*RRRSSS
Trigger: GGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGC...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGATCCAGCCCTTCCCCGTaGAAGCTGGGAGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGSSPSP*KLGGWL
Trigger: AAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGA...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAGTGGAGGCCGCCAGCTaGGTGGGGATCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAVEAAS*VGICCC
Trigger: GCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCCTGCTCTTGCCGCCCTaGTCCTTGCCACCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLLLLPP*SLPPLV
Trigger: CACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAG...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCGCTGTGCCCCCGGCCTaGAGAGAGAAGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPAVPPA*REKPSE
Trigger: CTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAGC...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCTTGCTGGCGTCCTCCTaGGCGCTGAGTGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCILLASS*ALSGVA
Trigger: GGCCACACCACTCAGCGCCAAGGAGGACGCCAGCAA...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATAAGATGACGTCTTCTTaGCTGGCGTCCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNKMTSS*LASSLA
Trigger: CGCCAAGGAGGACGCCAGCAAAGAAGACGTCATCTT...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 5 (lower is better)
Translates to: QGVYPPWLKLEARSPRQAKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCTCCTGGTGCCCTAACCCTTGGCTCCACTGTCGCGCGGCGGCTGTGGAGCGTCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: PSWCPNPWLHCRAAAVERQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...ACGCTCCACAGCCGCCGCGCGACAGTGGAGCCAAGGGTTAGGGCACCAGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SASQECLCQHSGRRAESPVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp GCCCCCAGAGAGACACCCTTGAGTCCAGGTCTTCAGCCCTCCTCCTaGCAGGTTCAAAGCAAGGCTGGCCAGTGTTCGGGGGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: APRETPLSPGLQPSS*QVQSKAGQCSGETG
Trigger: CCCTGTCTCCCCCGAACACTGGCCAGCCTTGCTTTGAACCTGCCAGGAGGAGGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCCCCGGGGGTGCTCCTaGAGCGAGGCTCGGCCCGAT +
Preference number: 5 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQPRGCS*SEARPD
Trigger: ATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGGG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS-3UTR CAA 90 bp GCCGAGGGGCACTGGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCCTCATAAAGGACATCTaGTCTTTTCACCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: AEGHWRGKGCRRCRPMPSLIKDI*SFHHLP
Trigger: AGGGAGGTGGTGAAAAGACAAGATGTCCTTTATGAG...GCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCCAGTGCCCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCCGCTGCTTCTCGAAGTaGCGTTGCCGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SASQECLCQHSGRRAESPRCFSK*RCRSCS
Trigger: GGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCG...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEAVFCF*RRRSSS
Trigger: GGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGTGGAGGCCGCCAGCTaGGTGGGGATCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYVEAAS*VGICCC
Trigger: GCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTTGCCGCCCTTGTCCTaGCCACCCTTGGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLPPLS*PPLVEA
Trigger: GGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTTGCCGCCCTTGTCCTaGCCACCCTTGGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALLPPLS*PPLVEA
Trigger: GGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGTCTTTCCCCATGAGCTaGTTGAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GVYPPWLKLEARSPRQAESFPMS*LSSSCC
Trigger: GCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGA...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCCCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: GEGRAVGAAARCLARLRPPSRNS*NFSPIQ
Trigger: TTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGG...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp AGCTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTGGTGCCCATTaGCACACTCCCGCCTCTCTCGTGCATCCTGGCCCTTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SWRGRRRSLATAGAH*HTPASLVHPGPCPS
Trigger: TGAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 90 bp GGGAAGAGGCGGCCAATGGCCTTGCTGCTGAACTGCAGCTCCTCCTaGAGGGCCCTGGAGTACACCTTCAGCATGATCTTGAGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: GKRRPMALLLNCSSS*RALEYTFSMILSVR
Trigger: GCGGACGCTCAAGATCATGCTGAAGGTGTACTCCAGGGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp TGTGATTGGTCCGAGTTGCGTCCCAGGGCCAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTGAGAGACCGTCATACCGACATTCCT +
Preference number: 5 (lower is better)
Translates to: CDWSELRPRASRARC*LGTPFLRDRHTDIP
Trigger: AGGAATGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCAGCCGGGCTCGGTGTaGGCTGGGGACCCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLQPGSV*AGDPLS
Trigger: AGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGTGTGATTGGTCCGAGTaGCGTCCCAGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLCDWSE*RPRASR
Trigger: CCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTGTGATTGGTCCGAGTaGCGTCCCAGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFCDWSE*RPRASR
Trigger: CCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCACCTTCAGCATGATCTaGAGCGTCCGCACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLTFSMI*SVRTWC
Trigger: GCACCACGTGCGGACGCTCAAGATCATGCTGAAGGT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAAGGCGGCCAATGGCCTaGCTGCTGAACTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PCHQWAVWLWGSGSRLAPRRPMA*LLNCSS
Trigger: GGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCT...TGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTAGGCGGCCAATGGCCTaGCTGCTGAACTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTARRPMA*LLNCSS
Trigger: GGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCT...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCGAGGGAAGGGCTGTCGGCGCTGCCGCCCGATGCCTAGCACGACTGAGACCCACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: GEGRAVGAAARCLARLRPTSTGY*VMRCVT
Trigger: GGTTACACAACGCATAACCAAATACCCAGTGCTGGT...GGGTCTCAGTCGTGCTAGGCATCGGGCGGCAGCGCCGACAGCCCTTCCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFSSAWP*ALPSCL
Trigger: CAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGA...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCCCTCTTGGTGGGGCTGTTaGTGCAGTCGTAGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: SASQECLCQHSGRRAESPSWWGC*CSRSPR
Trigger: TCGCGGGCTACGACTGCACAAACAGCCCCACCAAGA...GGGGGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACTCTTGGTGGGGCTGTTaGTGCAGTCGTAGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: SRERTVSCNSSLQARGPHSWWGC*CSRSPR
Trigger: TCGCGGGCTACGACTGCACAAACAGCCCCACCAAGA...GTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQLLEVA*PLLLQQ
Trigger: CTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCCGCTGCTTCTCGAAGTaGCGTTGCCGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: APFLTASEKQLGVDLPATRCFSK*RCRSCS
Trigger: GGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCG...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATCCAGCCCTTCCCCGTaGAAGCTGGGAGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLASSPSP*KLGGWL
Trigger: AAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSMGTSL*ASRFSV
Trigger: CACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCAT...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPMGTSL*ASRFSV
Trigger: CACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCAT...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTTGCCTCTGGAACTGGTaGGTGGCGCTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTACLWNW*VALSSW
Trigger: CCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCA...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGCCTCTGGAACTGGTaGGTGGCGCTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHCLWNW*VALSSW
Trigger: CCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTTTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPLSLPP*VEAASL
Trigger: CAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCATTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLALSLPP*VEAASL
Trigger: CAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTGCTCTTGCCGCCCTaGTCCTTGCCACCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLLLPP*SLPPLV
Trigger: CACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGCTGCTCTTGCCGCCCTaGTCCTTGCCACCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PELDRGWISPPWDVPAPLLLLPP*SLPPLV
Trigger: CACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAG...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGCTGTGCCCCCGGCCTaGAGAGAGAAGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SLYSASQECLCQHSGRRAAVPPA*REKPSE
Trigger: CTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAGC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCTGTGCCCCCGGCCTaGAGAGAGAAGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAAVPPA*REKPSE
Trigger: CTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAGC...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCATTGCTGGCGTCCTCCTaGGCGCTGAGTGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CILCMPWDMALSTVCDVPLLASS*ALSGVA
Trigger: GGCCACACCACTCAGCGCCAAGGAGGACGCCAGCAA...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 5 (lower is better)
Translates to: RSVLSSAPCRAGTVPHCLKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGCCCCCATCCAAGGAATaGTGGCATCTCGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLPPSKE*WHLGGL
Trigger: CAGCCCTCCGAGATGCCACAATTCCTTGGATGGGGG...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp ACTGTGTCTGCCGGGCAGGATAGGGCTCAGCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCCCATGAGCTTGTTGAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TVSAGQDRAQRAAVP*GALIFPHELVEQQL
Trigger: CAGCTGCTGCTCAACAAGCTCATGGGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCGCTGAGCCCTATCCTGCCCGGCAGACACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp CGCGGAAGCCCCGCTCCGACTGCGGCCGCAGCACAGACAGGATCTTaGAGGTCAGCAGCTCGTTATCCAAGAAGACGTTCTCGCTCCATT +
Preference number: 5 (lower is better)
Translates to: RGSPAPTAAAAQTGS*RSAARYPRRRSRSI
Trigger: AATGGAGCGAGAACGTCTTCTTGGATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGGCTTCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS CCA 90 bp ACAGGAATTCAAACCAGGTCAGGTTCGAGTGGGCTCCTCCGGGGCTaGCTGACATGCAAGCCCTCTGCCGGGCCCCATGGTACTGTCGAA +
Preference number: 5 (lower is better)
Translates to: TGIQTRSGSSGLLRG*LTCKPSAGPHGTVE
Trigger: TTCGACAGTACCATGGGGCCCGGCAGAGGGCTTGCATGTCAGCCAGCCCCGGAGGAGCCCACTCGAACCTGACCTGGTTTGAATTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCAGCCGGGCTCGGTGTaGGCTGGGGACCCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGQPGSV*AGDPLS
Trigger: AGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGTGTGATTGGTCCGAGTaGCGTCCCAGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLCDWSE*RPRASR
Trigger: CCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCACCTTCAGCATGATCTaGAGCGTCCGCACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCITFSMI*SVRTWC
Trigger: GCACCACGTGCGGACGCTCAAGATCATGCTGAAGGT...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGACATGCTCAACCGCTCTaGAAAGTCCCGGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGHAQPL*KVPESR
Trigger: ACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATG...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTTTGAAACTGCCATTCTaGGTGGGGCTGTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: QGVYPPWLKLEARSPRQALKLPF*VGLFVQ
Trigger: CTGCACAAACAGCCCCACCAAGAATGGCAGTTTCAA...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSAVFCF*RRRSSS
Trigger: GGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGC...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTTCCAAACCCACAGAACCTGACTGGAGGGCCACTGATGTTCCCTCAGTGGGCCCTGCTCTTGCCGCCCTaGTCCTTGCCACCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LPNPQNLTGGPLMFPQWALLLPP*SLPPLV
Trigger: CACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAG...GGCCCACTGAGGGAACATCAGTGGCCCTCCAGTCAGGTTCTGTGGGTTTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGGCTGTGCCCCCGGCCTaGAGAGAGAAGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQAVPPA*REKPSE
Trigger: CTCCGAGGGCTTCTCTCTCAAGGCCGGGGGCACAGC...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATTGCTGGCGTCCTCCTaGGCGCTGAGTGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQLLASS*ALSGVA
Trigger: GGCCACACCACTCAGCGCCAAGGAGGACGCCAGCAA...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAGAGGGGCCTTGCACCTaGAGTCACGGCCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKEGPCT*SHGPFR
Trigger: TCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCTC...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGAGGGGCCTTGCACCTaGAGTCACGGCCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCEGPCT*SHGPFR
Trigger: TCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCTC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCGGAGGGCTGGACCGGCACACGCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SEGWTGTRRLRRVPGSGNLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...ATTCCCAGACCCTGGCACCCTCCTGAGCCGGCGTGTGCCGGTCCAGCCCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 5 (lower is better)
Translates to: SGPCHQWAVWLWGSGSRLPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...CAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GPGRGSHVPHWEQGRSARGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...CCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAAGTTCGGGAGAAGGACTaGGCCCTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQVREKD*ALAGAH
Trigger: GTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAAC...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGCCTGTCCCCGCTTTaGGAGTGCGCATTCCCCATG +
Preference number: 5 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCLSPL*ECAFPM
Trigger: CATGGGGAATGCGCACTCCAAAAGCGGGGACAGGCA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS GCA 90 bp GATGTGCTGGGCTCTTCCCCTTCTCCTTCTGCCTGGTCACTCGACTaGGGAGGCAGCTCAGCCTGCGCTTCACACTGGTACTCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: DVLGSSPSPSAWSLD*GGSSACASHWYSCH
Trigger: GTGACAAGAGTACCAGTGTGAAGCGCAGGCTGAGCTGCCTCCGCAGTCGAGTGACCAGGCAGAAGGAGAAGGGGAAGAGCCCAGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 90 bp CCCTTGCAACAGCTGGTGCCCATTGACACACTCCCGCCTCTCTCGTaGATCCTGGCCCTTGTCCTTCAGATGTGCTGGGCTCTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PLQQLVPIDTLPPLS*ILALVLQMCWALPL
Trigger: AAGGGGAAGAGCCCAGCACATCTGAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 90 bp ACCCGGCGCGGCGCCAGGCTGGGCTGCGCCGTTTTTATGCCTCGGTaGGATCCTTCTAGAAAACAGAGCTGCGTCTTCCCTTGCTGTATT +
Preference number: 5 (lower is better)
Translates to: TRRGARLGCAVFMPR*DPSRKQSCVFPCCI
Trigger: AATACAGCAAGGGAAGACGCAGCTCTGTTTTCTAGAAGGATCCCACCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCCGCGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS CCA 90 bp TTTCCCAGCTGCGCCGCCTTGACAGGTCTTGGGACCCTGCCAAGCTaGAGAAAAGAGAATCTCTTCCTGGTTCTTCACCGGTGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: FPSCAALTGLGTLPS*RKENLFLVLHRWGG
Trigger: GCCGCCCCACCGGTGAAGAACCAGGAAGAGATTCTCTTTTCTCCAGCTTGGCAGGGTCCCAAGACCTGTCAAGGCGGCGCAGCTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCTGTGATTGGTCCGAGTaGCGTCCCAGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFCDWSE*RPRASR
Trigger: CCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCACCACCTCCCTCTTTaGCTTCTTGGCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHHHLPL*LLGVGC
Trigger: GCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAAAACAGCTACCTTCAGCATGATCTaGAGCGTCCGCACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: SSAPCRAGTVPHCLGKTATFSMI*SVRTWC
Trigger: GCACCACGTGCGGACGCTCAAGATCATGCTGAAGGT...AGCTGTTTTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCATCGCTTTCTCCTCGTaGGCCACTTCCCTCACGATG +
Preference number: 5 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCIIAFSS*ATSLTM
Trigger: CATCGTGAGGGAAGTGGCCAACGAGGAGAAAGCGAT...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATACATCTCCGGCCCTaGCAAGGAGGCGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: PELDRGWISPPWDVPAPLIHLRP*QGGADQ
Trigger: CTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTAT...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCATACATCTCCGGCCCTaGCAAGGAGGCGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPIHLRP*QGGADQ
Trigger: CTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTAT...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTCATGCTCAACCGCTCTaGAAAGTCCCGGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PLPCAHLSPSGGNVPVHCHAQPL*KVPESR
Trigger: ACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATG...ACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCATGCTCAACCGCTCTaGAAAGTCCCGGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQHAQPL*KVPESR
Trigger: ACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGTCGCTCATGGCCGACTaGAGAATTAGCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALSLMAD*RISSPC
Trigger: GCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGA...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTCGCTCATGGCCGACTaGAGAATTAGCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPSLMAD*RISSPC
Trigger: GCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSSAWP*ALPSCL
Trigger: CAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTCTTGGTGGGGCTGTTaGTGCAGTCGTAGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFSWWGC*CSRSPR
Trigger: TCGCGGGCTACGACTGCACAAACAGCCCCACCAAGA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTCTTGGTGGGGCTGTTaGTGCAGTCGTAGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTSWWGC*CSRSPR
Trigger: TCGCGGGCTACGACTGCACAAACAGCCCCACCAAGA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRLLEVA*PLLLQQ
Trigger: CTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAG...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCCAGCCCTTCCCCGTaGAAGCTGGGAGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASSPSP*KLGGWL
Trigger: AAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTCCAGCCCTTCCCCGTaGAAGCTGGGAGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSSPSP*KLGGWL
Trigger: AAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMLSLPP*VEAASL
Trigger: CAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAATTGCCGCCCTTGTCCTaGCCACCCTTGGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELPPLS*PPLVEA
Trigger: GGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAA...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCTGCTCTTGCCGCCCTaGTCCTTGCCACCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: YSASQECLCQHSGRRAESLLLPP*SLPPLV
Trigger: CACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCTCTTTCCCCATGAGCTaGTTGAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLSFPMS*LSSSCC
Trigger: GCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGA...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCCAGACAGGCTGAGCGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SPRQAERVNSNGCPWEAEAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...CTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACGCTCAGCCTGTCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAACCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 5 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 5 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDAPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 5 (lower is better)
Translates to: SLYSASQECLCQHSGRRAPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCCCCCATCCAAGGAATaGTGGCATCTCGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFPPSKE*WHLGGL
Trigger: CAGCCCTCCGAGATGCCACAATTCCTTGGATGGGGG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGCCGGAGAAGGTCCCTaGCAACAGCTGGTGCCCATT +
Preference number: 5 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVAGEGP*QQLVPI
Trigger: AATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS CCA 90 bp CTGCTGCTCTTGGTGGCTGAAGCCACAGCTCCAGAGTCAAAAGGCTaGACACATGACTTGGGCTCAGAGCCTCTCTTGAAGGCCCACCGC +
Preference number: 5 (lower is better)
Translates to: LLLLVAEATAPESKG*THDLGSEPLLKAHR
Trigger: GCGGTGGGCCTTCAAGAGAGGCTCTGAGCCCAAGTCATGTGTCCAGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671891.2
CDS CCA 90 bp GAGCAGCTCCGCGACCTTTCCCAGCTGCGCCGCCTTGACAGGTCTTaGGACCCTGCCAAGCTGGAGAAAAGAGAATCTCTTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: EQLRDLSQLRRLDRS*DPAKLEKRESLPGS
Trigger: AGAACCAGGAAGAGATTCTCTTTTCTCCAGCTTGGCAGGGTCCCAAGACCTGTCAAGGCGGCGCAGCTGGGAAAGGTCGCGGAGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp GGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTGAGCTCATAAAGGACATCTaGTCTTTTCACCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: GVYPPWLKLEARSPRQAELIKDI*SFHHLP
Trigger: AGGGAGGTGGTGAAAAGACAAGATGTCCTTTATGAG...CTCAGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGTGTGTACCCGCCCTGGCTGAAGCTAGAGGCCCGCTCCCCCAGACAGGCTTGTGAGATGATATCTTaGATGAGGTTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QGVYPPWLKLEARSPRQACEMIS*MRFKAW
Trigger: CCAGGCCTTGAACCTCATCAAAGATATCATCTCACA...AGCCTGTCTGGGGGAGCGGGCCTCTAGCTTCAGCCAGGGCGGGTACACACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCACACTCACTGACCTaGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSHSLT*ASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGA...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGAGCCCGTTCTTGAGTTaGCTGGAAGACTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMSPFLS*LEDFRS
Trigger: GGACCTGAAGTCTTCCAGCAAACTCAAGAACGGGCT...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGATACATCTCCGGCCCTaGCAAGGAGGCGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRIHLRP*QGGADQ
Trigger: CTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTAT...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCGCTGCTTCTCGAAGTaGCGTTGCCGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGRCFSK*RCRSCS
Trigger: GGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCGTGGAGGCCGCCAGCTaGGTGGGGATCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIVEAAS*VGICCC
Trigger: GCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCAC...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCTTTCCCCATGAGCTaGTTGAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSFPMS*LSSSCC
Trigger: GCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTCTTTCCCCATGAGCTaGTTGAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTSFPMS*LSSSCC
Trigger: GCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTTGCTGGCGTCCTCCTaGGCGCTGAGTGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVLLASS*ALSGVA
Trigger: GGCCACACCACTCAGCGCCAAGGAGGACGCCAGCAA...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCAAAGATGACGTCTTCTTaGCTGGCGTCCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GPCHQWAVWLWGSGSRLAKMTSS*LASSLA
Trigger: CGCCAAGGAGGACGCCAGCAAAGAAGACGTCATCTT...TGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGAGGGGCCTTGCACCTaGAGTCACGGCCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNREGPCT*SHGPFR
Trigger: TCTAAAAGGGCCGTGACTCAAGGTGCAAGGCCCCTC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGCGTGGGGCTCTGTTaGGGAAGTGGATTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTCVGLC*GSGFCL
Trigger: CAGGCAGAATCCACTTCCCAAACAGAGCCCCACGCA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCAACACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PNTSFLHPSRERTVSCNSSYHQC*GCRTRL
Trigger: AAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGA...GCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTCCCCCATCCAAGGAATaGTGGCATCTCGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSPPSKE*WHLGGL
Trigger: CAGCCCTCCGAGATGCCACAATTCCTTGGATGGGGG...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp ATCCACGGCGAGGCTCCAGGACTCAGCTTCAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAGCGAGGCGGTGTAGGGATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: IHGEAPGLSFKLVAV*LNLTPQRGGVGIFY
Trigger: GTAGAAGATCCCTACACCGCCTCGCTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGAGTCCTGGAGCCTCGCCGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp CTGGAAGACTTCAGGTCCATCTTCCCTGCGATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTGACCTTGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LEDFRSIFPAISLRR*PFSHSLTLASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTGAAGTCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTCACCACCTCCCTCTTTaGCTTCTTGGCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLYSASQECLCQHSGRRAHHLPL*LLGVGC
Trigger: GCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTG...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGTTCGGGAGAAGGACTTGGCCCTGGCAGGGGCTCACATGTACCCCACTGGGAACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: GFGRRTWPWQGLTCTPLGTSTGY*VMRCVT
Trigger: GGTTACACAACGCATAACCAAATACCCAGTGCTGGT...TCCCAGTGGGGTACATGTGAGCCCCTGCCAGGGCCAAGTCCTTCTCCCGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGTCACACTCACTGACCTaGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: PELDRGWISPPWDVPAPLSHSLT*ASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGA...CAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGATACATCTCCGGCCCTaGCAAGGAGGCGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMIHLRP*QGGADQ
Trigger: CTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTAT...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTTCGCTCATGGCCGACTaGAGAATTAGCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSSLMAD*RISSPC
Trigger: GCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGA...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTTCGCTCATGGCCGACTaGAGAATTAGCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDASLMAD*RISSPC
Trigger: GCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGA...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGGGCCCGCACAGCGGCCACTTGTCCACTTGCTGCAACGTCTCTAGGTGCATCTTGAAACTGCCATTCTaGGTGGGGCTGTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: RGPHSGHLSTCCNVSRCILKLPF*VGLFVQ
Trigger: CTGCACAAACAGCCCCACCAAGAATGGCAGTTTCAA...GATGCACCTAGAGACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELLEVA*PLLLQQ
Trigger: CTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QKFLELLPHPRNCGISEGAVFCF*RRRSSS
Trigger: GGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGC...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCMGTSL*ASRFSV
Trigger: CACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCAT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCLSLPP*VEAASL
Trigger: CAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTTGCCGCCCTTGTCCTaGCCACCCTTGGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGILPPLS*PPLVEA
Trigger: GGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAA...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAAAGATGACGTCTTCTTaGCTGGCGTCCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVKMTSS*LASSLA
Trigger: CGCCAAGGAGGACGCCAGCAAAGAAGACGTCATCTT...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCGATGTCCCAGCACCTTaGATGCTGCCCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: YSASQECLCQHSGRRAESDVPAP*MLPNTS
Trigger: GGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATC...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTAGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGTGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 5 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGCTCATTTCCCGGGGGCTGAGGACCCTGTGCCCAGGGTGTGTACCCGCCCTTCTCGGACACGTTTATaGCTAGAATCAGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GAHFPGAEDPVPRVCTRPSRTRL*LESGLK
Trigger: CTTAAGACCTGATTCTAGCAATAAACGTGTCCGAGA...AGGGCGGGTACACACCCTGGGCACAGGGTCCTCAGCCCCCGGGAAATGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCTGGAGGGCAGGATATaGGTCCCCACTGTGACCATT +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYLEGRI*VPTVTI
Trigger: AATGGTCACAGTGGGGACCAATATCCTGCCCTCCAG...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACTCTTCCCTTGCTGTATaGGCTGAAGCAGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYSSLAV*AEAAGL
Trigger: CAGACCCGCTGCTTCAGCCAATACAGCAAGGGAAGA...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCACACAGGAACGGACCTaGACCTCCCTCTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPTQERT*TSLFSW
Trigger: CCAAGAAAAGAGGGAGGTCAAGGTCCGTTCCTGTGT...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGCGTGCATCCTGGCCCTaGTCCTTCAGATGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQRASWP*SFRCAG
Trigger: CCCAGCACATCTGAAGGACAAGGGCCAGGATGCACG...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTAACAGCTGGTGCCCATaGACACACTCCCGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSNSWCP*THSRLS
Trigger: AGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTT...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS TCA 90 bp GATGTGGTCTTCCAGCATAGCATGCCCTCCAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGGAAGGTGAGCCCGTTCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: DVVFQHSMPSRWSCR*SMSSLRKVSPFLSL
Trigger: CAAACTCAAGAACGGGCTCACCTTCCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGACCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp CCCAAGGGAACCGCTGGCTGGGTAGAGCCTGGGATAACCACAGAATaGCCCAATAGCACCTCGACTTCCTCTTTCTCAACTGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PKGTAGWVEPGITTE*PNSTSTSSFSTACL
Trigger: CAGGCAGGCAGTTGAGAAAGAGGAAGTCGAGGTGCTATTGGGTCATTCTGTGGTTATCCCAGGCTCTACCCAGCCAGCGGTTCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS GCA 90 bp GAGCCCGTTCTTGAGTTTGCTGGAAGACTTCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTGGCCCTTCTCACACTCACTGACCTT +
Preference number: 5 (lower is better)
Translates to: EPVLEFAGRLQVHLP*DLPEALALLTLTDL
Trigger: AAGGTCAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTGAAGTCTTCCAGCAAACTCAAGAACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp CCAGGATATCTTTCAAGCGCCCTGATGTGGTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCCGCTGAAGCATGTCTTCCTTGCGGA +
Preference number: 5 (lower is better)
Translates to: PGYLSSALMWSSSIA*PPGGAAAEACLPCG
Trigger: TCCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGACCACATCAGGGCGCTTGAAAGATATCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp AATGACCCAATAGCACCTCGACTTCCTCTTTCTCAACTGCCTGCCTaGATGCTTGCCACTCTGCTCCCAGCTGCAGGCCAATCTAGGGGC +
Preference number: 5 (lower is better)
Translates to: NDPIAPRLPLSQLPA*MLATLLPAAGQSRG
Trigger: GCCCCTAGATTGGCCTGCAGCTGGGAGCAGAGTGGCAAGCATGCAGGCAGGCAGTTGAGAAAGAGGAAGTCGAGGTGCTATTGGGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS GCA 90 bp CACATGACTTGGGCTCAGAGCCAGATAGAGCTCAGTTCTTCAACCTaGAGGCACCTAGCCTGGCTAACAGCTCCTGCAGCTCCCATGACC +
Preference number: 5 (lower is better)
Translates to: HMTWAQSQIELSSST*RHLAWLTAPAAPMT
Trigger: GGTCATGGGAGCTGCAGGAGCTGTTAGCCAGGCTAGGTGCCTGCAGGTTGAAGAACTGAGCTCTATCTGGCTCTGAGCCCAAGTCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GCACCGTTCCTCACTGCCTCGGAAAAACAGCTCGGAGTTGATCTCCCCGCCACCAAGGTGAGCCCGTTCTaGAGTTTGCTGGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: APFLTASEKQLGVDLPATKVSPF*SLLEDF
Trigger: GAAGTCTTCCAGCAAACTCAAGAACGGGCTCACCTT...GGTGGCGGGGAGATCAACTCCGAGCTGTTTTTCCGAGGCAGTGAGGAACGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTATCGCTTTCTCCTCGTaGGCCACTTCCCTCACGATG +
Preference number: 5 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLIAFSS*ATSLTM
Trigger: CATCGTGAGGGAAGTGGCCAACGAGGAGAAAGCGAT...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTATCGCTTTCTCCTCGTaGGCCACTTCCCTCACGATG +
Preference number: 5 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIIAFSS*ATSLTM
Trigger: CATCGTGAGGGAAGTGGCCAACGAGGAGAAAGCGAT...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCCATGCTCAACCGCTCTaGAAAGTCCCGGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: YSASQECLCQHSGRRAESHAQPL*KVPESR
Trigger: ACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATG...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCCTCCACCCTTGAAACTGCCATTCTaGGTGGGGCTGTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: TLGCPSTFDAAQHLLPPPLKLPF*VGLFVQ
Trigger: CTGCACAAACAGCCCCACCAAGAATGGCAGTTTCAA...GGGTGGAGGAAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGTCTTTCCCCATGAGCTaGTTGAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQSFPMS*LSSSCC
Trigger: GCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGA...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACATTGCTGGCGTCCTCCTaGGCGCTGAGTGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RRVPGSGNVLFTTEQECTLLASS*ALSGVA
Trigger: GGCCACACCACTCAGCGCCAAGGAGGACGCCAGCAA...TGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTAAGATGACGTCTTCTTaGCTGGCGTCCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSKMTSS*LASSLA
Trigger: CGCCAAGGAGGACGCCAGCAAAGAAGACGTCATCTT...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 5 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGCCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: GPFLHRSWIVDGSHHPGMLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...CATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCATGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CILCMPWDMALSTVCDVPCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCCCGCACAGCGGCCACTaGTCCACTTGCTGCAACGTC +
Preference number: 5 (lower is better)
Translates to: QKFLELLPHPRNCGISEGPHSGH*STCCNV
Trigger: GACGTTGCAGCAAGTGGACAAGTGGCCGCTGTGCGG...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCTGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 5 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTCCCCCATCCAAGGAATaGTGGCATCTCGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCPPSKE*WHLGGL
Trigger: CAGCCCTCCGAGATGCCACAATTCCTTGGATGGGGG...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAGCACAGACAGGATCTaGGAGGTCAGCAGCTCGTTA +
Preference number: 5 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTSTDRI*EVSSSL
Trigger: TAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGCT...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS-3UTR CAA 90 bp CAGGGAACGGACCGTAAGCTGCAACAGCTCACTACAAGCGAGGGGCCCGCACAGCGCACGATGGAGAAGTaGCCAATTTTCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: QGTDRKLQQLTTSEGPAQRTMEK*PIFLIK
Trigger: CTTGATCAAGAAAATTGGCAACTTCTCCATCGTGCG...CTGTGCGGGCCCCTCGCTTGTAGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALTSTGY*VMRCVT
Trigger: GGTTACACAACGCATAACCAAATACCCAGTGCTGGT...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCTCACACTCACTGACCTaGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: YSASQECLCQHSGRRAESSHSLT*ASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGA...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGAGCCCGTTCTTGAGTTaGCTGGAAGACTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMSPFLS*LEDFRS
Trigger: GGACCTGAAGTCTTCCAGCAAACTCAAGAACGGGCT...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGAGCCCGTTCTTGAGTTaGCTGGAAGACTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RVAGMSLFTVFSVTGVPLSPFLS*LEDFRS
Trigger: GGACCTGAAGTCTTCCAGCAAACTCAAGAACGGGCT...CAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCCCGCCACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACAAGGTGAGCCCGTTCTaGAGTTTGCTGGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYKVSPF*SLLEDF
Trigger: GAAGTCTTCCAGCAAACTCAAGAACGGGCTCACCTT...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCCATGCTCAACCGCTCTaGAAAGTCCCGGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGHAQPL*KVPESR
Trigger: ACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATG...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAAAAGATGACGTCTTCTTaGCTGGCGTCCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEKMTSS*LASSLA
Trigger: CGCCAAGGAGGACGCCAGCAAAGAAGACGTCATCTT...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: DLVTNGLYGCGALVPGWHLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...GTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCCTTTCTCCACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: PFLHRSWIVDGSHHPGMSLGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...GGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGTGGAGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: HVPHWEQGRSARTQSYHQCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...TTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATTCAGAAAGTGACCCCGGCACCACCGCTAACCCTACAGAAACAGCTGCAAGGCGGTGCAGAACAAGGCTaGACATGGGCCCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IQKVTPAPPLTLQKQLQGGAEQG*TWALSP
Trigger: TGGAGAAAGGGCCCATGTCAAGCCTTGTTCTGCACC...GCCTTGCAGCTGTTTCTGTAGGGTTAGCGGTGGTGCCGGGGTCACTTTCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCAGTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PCAHLSPSGGNVPVHCIQSYHQC*GCRTRL
Trigger: AAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGA...CTGAATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSYHQC*GCRTRL
Trigger: AAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGA...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCTGGGGACACCTGGCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 5 (lower is better)
Translates to: AWGHLATVFSGPCHQWAVCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...TACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGCCAGGTGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCTGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 5 (lower is better)
Translates to: HMYPTGNKDDQPGPSPTTCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...GGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCACCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: CILCMPWDMALSTVCDVPPSRNS*NFSPIQ
Trigger: TTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGG...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGCTCACATGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACGCTCTCCCTTGGTCTTaGCAGGGTGTAAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: GSHVPHWEQGRSARTQSYALPWS*QGVKSK
Trigger: CTTGCTTTTTACACCCTGCAAAGACCAAGGGAGAGC...GTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACATGTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CAA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTAGCACAGACAGGATCTaGGAGGTCAGCAGCTCGTTA +
Preference number: 5 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLSTDRI*EVSSSL
Trigger: TAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGCT...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS TCA 90 bp GAGGCGCTGGCCCTTCTCACACTCACTGACCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAGGTTCAAGGCCTGGGTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: EALALLTLTDLGVHL*DDIFDEVQGLGQVF
Trigger: GAAGACCTGACCCAGGCCTTGAACCTCATCAAAGATATCATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGGGCCAGCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp CCATGGCAGAGAAGAAGTCTGGGTTCTCAGGTTTCCAGGATCCACTaGTGCTCTTGGTGGCTGAAGCCACAGCTCCAGAGTCAAAAGGCT +
Preference number: 5 (lower is better)
Translates to: PWQRRSLGSQVSRIH*CSWWLKPQLQSQKA
Trigger: AGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAGTGGATCCTGGAAACCTGAGAACCCAGACTTCTTCTCTGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 90 bp GCTGGACAATCAGCACGTGATCTGGTTCCACATGGTCTTTTTCCATaGACTCCAGCACTGGAGGTTCCAGGCCTTGAACAGGTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: AGQSARDLVPHGLFP*TPALEVPGLEQVEW
Trigger: CCACTCCACCTGTTCAAGGCCTGGAACCTCCAGTGCTGGAGTGCATGGAAAAAGACCATGTGGAACCAGATCACGTGCTGATTGTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 90 bp CTGCTGCTCTTGGTGGCTGAAGCCACAGCTCCAGAGTCAAAAGGCTaGACACATGACTTGGGCTCAGAGCCAGATAGAGCTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLLLVAEATAPESKG*THDLGSEPDRAQFF
Trigger: GAAGAACTGAGCTCTATCTGGCTCTGAGCCCAAGTCATGTGTCCAGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCCACCACCTCCCTCTTTaGCTTCTTGGCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIHHLPL*LLGVGC
Trigger: GCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTG...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGCTCATAAAGGACATCTaGTCTTTTCACCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALLIKDI*SFHHLP
Trigger: AGGGAGGTGGTGAAAAGACAAGATGTCCTTTATGAG...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCAAAGCAAGGTCTGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCGCACGATGGAGAAGTaGCCAATTTTCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: LKARSVLSSAPCRAGTVPRTMEK*PIFLIK
Trigger: CTTGATCAAGAAAATTGGCAACTTCTCCATCGTGCG...AGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACAGACCTTGCTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCCCGGTTGGCACCAGCTCGTATTTGGTTATGCGTaGTGTAACCAGGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: VTNGLYGCGALVPGWHQLVFGYA*CNQENA
Trigger: TGCATTCTCCTGGTTACACAACGCATAACCAAATAC...GAGCTGGTGCCAACCGGGAACCAGAGCCCCACAGCCATACAGCCCATTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCCCCTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGGTATTTGGTTATGCGTaGTGTAACCAGGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: SPPLCPSVPEWRECPCSLVFGYA*CNQENA
Trigger: TGCATTCTCCTGGTTACACAACGCATAACCAAATAC...CAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCATCCTCTGCATGCCCTGGGACATGGCGCTCTCGACAGTCTGTGATGTGCCAACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: CILCMPWDMALSTVCDVPTSTGY*VMRCVT
Trigger: GGTTACACAACGCATAACCAAATACCCAGTGCTGGT...TGGCACATCACAGACTGTCGAGAGCGCCATGTCCCAGGGCATGCAGAGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCTCCTTCCTCCACCCCTCCAGGGAACGGACCGTAAGCTGCAACAGCTCACTTGTGAGATGATATCTTaGATGAGGTTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HLLPPPLQGTDRKLQQLTCEMIS*MRFKAW
Trigger: CCAGGCCTTGAACCTCATCAAAGATATCATCTCACA...AGTGAGCTGTTGCAGCTTACGGTCCGTTCCCTGGAGGGGTGGAGGAAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTAAGGTGAGCCCGTTCTaGAGTTTGCTGGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: SLYSASQECLCQHSGRRAKVSPF*SLLEDF
Trigger: GAAGTCTTCCAGCAAACTCAAGAACGGGCTCACCTT...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGAATCCAAGGTGAGCCCGTTCTaGAGTTTGCTGGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: YSASQECLCQHSGRRAESKVSPF*SLLEDF
Trigger: GAAGTCTTCCAGCAAACTCAAGAACGGGCTCACCTT...GGATTCAGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCACTGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTAAGGTGAGCCCGTTCTaGAGTTTGCTGGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: ATVFSGPCHQWAVWLWGSKVSPF*SLLEDF
Trigger: GAAGTCTTCCAGCAAACTCAAGAACGGGCTCACCTT...AGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAGGGCAGGGAGGGGCCTaGCACCTTGAGTCACGGCCC +
Preference number: 5 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQGQGGA*HLESRP
Trigger: GGGCCGTGACTCAAGGTGCAAGGCCCCTCCCTGCCC...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCAAAAACAGCTCGGAGTaGATCTCCCCGCCACCCGGA +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGIKNSSE*ISPPPG
Trigger: TCCGGGTGGCGGGGAGATCAACTCCGAGCTGTTTTT...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTACCCCACTGGGAACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: CTPLGTRTISQDPVLPPMPSRNS*NFSPIQ
Trigger: TTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGG...CATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTTCCCAGTGGGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CTCCCTTGTGCCCATCTGTCCCCGAGTGGCGGGAATGTCCCTGTTCACTGTATTCCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: LPCAHLSPSGGNVPVHCIPSRNS*NFSPIQ
Trigger: TTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGG...AATACAGTGAACAGGGACATTCCCGCCACTCGGGGACAGATGGGCACAAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTCCTGTCCTCAGCTCCGTGCAGAGCCGGCACCGTTCCTCACTGCCTCGGAAATCTCGGACACGTTTATaGCTAGAATCAGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: CPVLSSVQSRHRSSLPRKSRTRL*LESGLK
Trigger: CTTAAGACCTGATTCTAGCAATAAACGTGTCCGAGA...TTTCCGAGGCAGTGAGGAACGGTGCCGGCTCTGCACGGAGCTGAGGACAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp AGAAGAAGTCTGGGTTCTCAGGTTTCCAGGATCCACTGCTGCTCTTaGTGGCTGAAGCCACAGCTCCAGAGTCAAAAGGCTGGACACATG +
Preference number: 5 (lower is better)
Translates to: RRSLGSQVSRIHCCS*WLKPQLQSQKAGHM
Trigger: CATGTGTCCAGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAGTGGATCCTGGAAACCTGAGAACCCAGACTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTCTCATAAAGGACATCTaGTCTTTTCACCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFLIKDI*SFHHLP
Trigger: AGGGAGGTGGTGAAAAGACAAGATGTCCTTTATGAG...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGCCTGGCTCATTCCCTGACCCTGAGGTTCATGGTGAACCTGCGTGGGGCTCTGGTATTTGGTTATGCGTaGTGTAACCAGGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: CLAHSLTLRFMVNLRGALVFGYA*CNQENA
Trigger: TGCATTCTCCTGGTTACACAACGCATAACCAAATAC...CAGAGCCCCACGCAGGTTCACCATGAACCTCAGGGTCAGGGAATGAGCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTAGCCCGTTCTTGAGTTaGCTGGAAGACTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCSPFLS*LEDFRS
Trigger: GGACCTGAAGTCTTCCAGCAAACTCAAGAACGGGCT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CGTGTGAACAGCAACGGTTGCCCTTGGGAAGCAGAGTTTGGGAAACAGCTGGTTTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RVNSNGCPWEAEFGKQLVSYHQC*GCRTRL
Trigger: AAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGA...AACCAGCTGTTTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TGTGTTCTCAGGACCTTGTCACCAATGGGCTGTATGGCTGTGGGGCTCTGGTTCTGTGTTCTCAGGACCTaGTCACCAATGGGCTGTATG +
Preference number: 5 (lower is better)
Translates to: CVLRTLSPMGCMAVGLWFCVLRT*SPMGCM
Trigger: CATACAGCCCATTGGTGACAAGGTCCTGAGAACACA...GAACCAGAGCCCCACAGCCATACAGCCCATTGGTGACAAGGTCCTGAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACCGAGCAGAAATTCCTaGAACTTCTCCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAEPSRNS*NFSPIQ
Trigger: TTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 90 bp CATAAAGGACATCTTGTCTTTTCACCACCTCCCTCTTTTGCTTCTTaGCGTAGGCTGCATCCACGGCGAGGCTCCAGGACTCAGCTTCAA +
Preference number: 5 (lower is better)
Translates to: HKGHLVFSPPPSFAS*RRLHPRRGSRTQLQ
Trigger: TTGAAGCTGAGTCCTGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTGAAAAGACAAGATGTCCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTGCCCAACACCTCCTTCGCACGATGGAGAAGTaGCCAATTTTCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: DLTTLGCPSTFDAAQHLLRTMEK*PIFLIK
Trigger: CTTGATCAAGAAAATTGGCAACTTCTCCATCGTGCG...AAGGAGGTGTTGGGCAGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTGATGCTCGCACGATGGAGAAGTaGCCAATTTTCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: AGSWMDLTTLGCPSTFDARTMEK*PIFLIK
Trigger: CTTGATCAAGAAAATTGGCAACTTCTCCATCGTGCG...AGCATCAAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GCCGGCTCAGGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGGTATTTGGTTATGCGTaGTGTAACCAGGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: AGSGGCQGLGMFSSQQNRVFGYA*CNQENA
Trigger: TGCATTCTCCTGGTTACACAACGCATAACCAAATAC...CCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCCTGAGCCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCGGAGGGCTCACACTCACTGACCTaGGCGTCCACTTGTGAGATG +
Preference number: 5 (lower is better)
Translates to: QKFLELLPHPRNCGISEGSHSLT*ASTCEM
Trigger: CATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGA...GCCCTCCGAGATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp AACAAGGACGATCAGCCAGGACCCAGTCCTACCACCAATGCTTGGGGTGCAGAACTTGGGAAGCAGAGTTaGGGAAACAGCTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: NKDDQPGPSPTTNAWGAELGKQS*GNSWFQ
Trigger: TTGAAACCAGCTGTTTCCCAAACTCTGCTTCCCAAG...TTCTGCACCCCAAGCATTGGTGGTAGGACTGGGTCCTGGCTGATCGTCCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGICEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTGGCATCTCCTACCACCAATGCTaGGGGTGCAGAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VAEQKFLELLPHPRNCGISYHQC*GCRTRL
Trigger: AAGCCTTGTTCTGCACCCCAAGCATTGGTGGTAGGA...GATGCCACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACCGGAGCTGGATCGTGGATGGATCTCACCACCCTGGGATGTCCCAGCACCTTTTCTCGGACACGTTTATaGCTAGAATCAGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: TGAGSWMDLTTLGCPSTFSRTRL*LESGLK
Trigger: CTTAAGACCTGATTCTAGCAATAAACGTGTCCGAGA...AAAGGTGCTGGGACATCCCAGGGTGGTGAGATCCATCCACGATCCAGCTCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000617428.4
ENST00000668164.2
CDS GCA 90 bp ACTGGGTATTTGGTTATGCGTTGTGTAACCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACGATGGAGAAGTTGCCAATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TGYLVMRCVTRRMHS*TPSRRTMEKLPIFL
Trigger: CAAGAAAATTGGCAACTTCTCCATCGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCTGGTTACACAACGCATAACCAAATACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGGGAGAAGGGCTGTATTTGGTTATGCGTaGTGTAACCAGGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: SLYSASQECLCQHSGRRAVFGYA*CNQENA
Trigger: TGCATTCTCCTGGTTACACAACGCATAACCAAATAC...AGCCCTTCTCCCACTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCTSTGY*VMRCVT
Trigger: GGTTACACAACGCATAACCAAATACCCAGTGCTGGT...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAATGTCCCTGTTCACTGTATTCAGCGTCACAGGAGTGCCTCTGCCAGCACAGTGTGAGATGATATCTTaGATGAGGTTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GMSLFTVFSVTGVPLPAQCEMIS*MRFKAW
Trigger: CCAGGCCTTGAACCTCATCAAAGATATCATCTCACA...CTGTGCTGGCAGAGGCACTCCTGTGACGCTGAATACAGTGAACAGGGACATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTTGAAACTGCCATTCTaGGTGGGGCTGTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQLKLPF*VGLFVQ
Trigger: CTGCACAAACAGCCCCACCAAGAATGGCAGTTTCAA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQMGTSL*ASRFSV
Trigger: CACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCAT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSMGTSL*ASRFSV
Trigger: CACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCAT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCTGCCTCTGGAACTGGTaGGTGGCGCTGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSCLWNW*VALSSW
Trigger: CCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCA...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACTGTGATTGGTCCGAGTaGCGTCCCAGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNCDWSE*RPRASR
Trigger: CCGGCTGGCCCTGGGACGCAACTCGGACCAATCACA...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp CACCGCGTGGCCGAGCAGAAATTCCTTGAACTTCTCCCCCATCCAAGGAATTGTTGTGAGATGATATCTTaGATGAGGTTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HRVAEQKFLELLPHPRNCCEMIS*MRFKAW
Trigger: CCAGGCCTTGAACCTCATCAAAGATATCATCTCACA...ACAATTCCTTGGATGGGGGAGAAGTTCAAGGAATTTCTGCTCGGCCACGCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCACCACCTCCCTCTTTaGCTTCTTGGCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVHHLPL*LLGVGC
Trigger: GCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGCTCATAAAGGACATCTaGTCTTTTCACCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQLIKDI*SFHHLP
Trigger: AGGGAGGTGGTGAAAAGACAAGATGTCCTTTATGAG...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGACCTTCAGCATGATCTaGAGCGTCCGCACGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVTFSMI*SVRTWC
Trigger: GCACCACGTGCGGACGCTCAAGATCATGCTGAAGGT...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACAGGCGGCCAATGGCCTaGCTGCTGAACTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNRRPMA*LLNCSS
Trigger: GGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCT...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTGTGAGATGATATCTTaGATGAGGTTCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQCEMIS*MRFKAW
Trigger: CCAGGCCTTGAACCTCATCAAAGATATCATCTCACA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGATACTCAGTACAAATACATCTCCGGCCCTaGCAAGGAGGCGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: TEQECTVSFCKVLRYSVQIHLRP*QGGADQ
Trigger: CTGATCAGCGCCTCCTTGCAAGGGCCGGAGATGTAT...TTGTACTGAGTATCGGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACCGCTGCTTCTCGAAGTaGCGTTGCCGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNRCFSK*RCRSCS
Trigger: GGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCG...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCATCGCTTTCTCCTCGTaGGCCACTTCCCTCACGATG +
Preference number: 5 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSIAFSS*ATSLTM
Trigger: CATCGTGAGGGAAGTGGCCAACGAGGAGAAAGCGAT...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCAGCAACGGTTGCCCTaGGGAAGCAGAGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: GNVLFTTEQECTVSFCKVQQRLP*GSRVWE
Trigger: TTCCCAAACTCTGCTTCCCAAGGGCAACCGTTGCTG...CACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp GGAGGGTGCCAGGGTCTGGGAATGTTCTCTTCACAACAGAACAGGAATGTACAGTCTCGGACACGTTTATaGCTAGAATCAGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GGCQGLGMFSSQQNRNVQSRTRL*LESGLK
Trigger: CTTAAGACCTGATTCTAGCAATAAACGTGTCCGAGA...CTGTACATTCCTGTTCTGTTGTGAAGAGAACATTCCCAGACCCTGGCACCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGCGGTCATCAGTGGTTaGCTAGGGAAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNAVISG*LGKRRG
Trigger: TCCCCTCCTCTTCCCTAGCAAACCACTGATGACCGC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319670.14
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCTGTGAACAGCAACGGTaGCCCTTGGGAAGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSCEQQR*PLGSRV
Trigger: AACTCTGCTTCCCAAGGGCAACCGTTGCTGTTCACA...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 90 bp AAAGCAAGTGAGCTGTTTGAGTTTGCTGTAAATAGTCTAAGATCATaGAACGGTGAGCCTGGCGTGCTTCATGCCAAAACCTCGCACATG +
Preference number: 5 (lower is better)
Translates to: KASELFEFAVNSLRS*NGEPGVLHAKTSHM
Trigger: CATGTGCGAGGTTTTGGCATGAAGCACGCCAGGCTCACCGTTTCATGATCTTAGACTATTTACAGCAAACTCAAACAGCTCACTTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACGAGCTGCGTCTTCCCTaGCTGTATTGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNELRLP*LYWLKQ
Trigger: CTGCTTCAGCCAATACAGCAAGGGAAGACGCAGCTC...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS-3UTR CAA 90 bp ATGTTCTCTTCACAACAGAACAGGAATGTACAGTCAGCTTCTGTAAAGTGCTCCGTACTGTCGAAGTTCTaGAAGCACCTGCTGGACAAT +
Preference number: 5 (lower is better)
Translates to: MFSSQQNRNVQSASVKCSVLSKF*KHLLDN
Trigger: ATTGTCCAGCAGGTGCTTCAAGAACTTCGACAGTAC...GGAGCACTTTACAGAAGCTGACTGTACATTCCTGTTCTGTTGTGAAGAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS-3UTR CAA 90 bp TATGATTTCAGACAGCTCCCTGGTTTAGTTCTGGCTCAACTTTCCATTAAAAACTTGAAACTGCCATTCTaGGTGGGGCTGTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: YDFRQLPGLVLAQLSIKNLKLPF*VGLFVQ
Trigger: CTGCACAAACAGCCCCACCAAGAATGGCAGTTTCAA...GTTTTTAATGGAAAGTTGAGCCAGAACTAAACCAGGGAGCTGTCTGAAATCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CGCTCGCGTAGCTGCCGCGCCTCGCCCTCGCGCTCCTaGAGCCGCGCGCCCGCACGCTCCAGCTCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: RSRSCRASPSRS*SRAPARSSSWC
Trigger: GCACCAGGAGCTGGAGCGTGCGGGCGCGCGGCTGCAGGAGCGCGAGGGCGAGGCGCGGCAGCTACGCGAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp GCCGGGCTGCCATCGGACAGGAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTCGGCCCGATCGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: AGLPSDRRVPRG*SLSEARPDRPQ
Trigger: CTGCGGGCGATCGGGCCGAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCTCCTGTCCGATGGCAGCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS GCA 72 bp CCCGATCGCCCGCAGGCCGCTCTCCGCCAGCTCCTCTaGCACTCTCGCAGCCGCCTCCGATGCCTCCGTCCG +
Preference number: 6 (lower is better)
Translates to: PDRPQAALRQLL*HSRSRLRCLRP
Trigger: CGGACGGAGGCATCGGAGGCGGCTGCGAGAGTGGCAGAGGAGCTGGCGGAGAGCGGCCTGCGGGCGATCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319670.14
ENST00000594665.2
CDS CAA 72 bp TCGGGCGGCAGCGCGCCTGGCGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCCAGGCGCTCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: SGGSAPGAVFCF*RRRSSSRRSRS
Trigger: CGAGCGGGAGCGCCTGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp GCCAGTGTGTCGGGCGGCAGCGCGCCTGGCGCGGTGTTCTGCTTCTaGAGGCGGCGCAGCAGCTCCAGGCGCTCCCGCTCGCGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ASVSGGSAPGAVFCF*RRRSSSRRSRSRST
Trigger: CGTGGAGCGCGAGCGGGAGCGCCTGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGACACACTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TGCCACTGGCGCTCGCGCTCCCAGCGCTGCTGCTCGTaGCGCAGCTGGCTCTGCAGCTTCTCCAGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: CHWRSRSQRCCS*RSWLCSFSRAA
Trigger: CGCGGCCCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CTGGGCCTCGGCCAGTGTGTCGGGCGGCAGCGCGCCTaGCGCGGTGTTCTGCTTCTTGAGGCGGCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LGLGQCVGRQRA*RGVLLLEAAQQ
Trigger: CTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGACACACTGGCCGAGGCCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp GGGCCCTCCAGCCCTTCCCCGTTGAAGCTGGGAGGGTaGCTTGGGGGCTGGGCCTCGGCCAGTGTGTCGGGC +
Preference number: 6 (lower is better)
Translates to: GPSSPSPLKLGG*LGGWASASVSG
Trigger: GCCCGACACACTGGCCGAGGCCCAGCCCCCAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGAGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp AGTGTGTCGGGCGGCAGCGCGCCTGGCGCGGTGTTCTaGTTCTTGAGGCGGCGCAGCAGCTCCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SVSGGSAPGAVF*FLRRRSSSRRS
Trigger: GGAGCGCCTGGAGCTGCTGCGCCGCCTCAAGAAGCAGAACACCGCGCCAGGCGCGCTGCCGCCCGACACACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CTGGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTaGCCGTTGGCGCTGCCCAGCTGCCTGCAGATCAGG +
Preference number: 6 (lower is better)
Translates to: LGGPVELPPSSA*PLALPSCLQIR
Trigger: CCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp GTCCCGGCGAGCCACCTCGGGGCGCTCTGCGTACTCTaGCCCCACGCCGGATGGCAGCATGCTCACACGAGG +
Preference number: 6 (lower is better)
Translates to: VPASHLGALCVL*PHAGWQHAHTR
Trigger: CCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAGGTGGCTCGCCGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp CTCCTGGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTGCAGATCAGGCTCTGGATGCCCTCG +
Preference number: 6 (lower is better)
Translates to: LLGGPVELPPSSAWP*ALPSCLQIRLWMPS
Trigger: CGAGGGCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TGGTGCTGCCACTGGCGCTCGCGCTCCCAGCGCTGCTaGTCGTGCCGCAGCTGGCTCTGCAGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WCCHWRSRSQRC*SCRSWLCSFSR
Trigger: CCTGGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TCCTGGTGCTGCCACTGGCGCTCGCGCTCCCAGCGCTaGTGCTCGTGCCGCAGCTGGCTCTGCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SWCCHWRSRSQR*CSCRSWLCSFS
Trigger: GGAGAAGCTGCAGAGCCAGCTGCGGCACGAGCAGCAGCGCTGGGAGCGCGAGCGCCAGTGGCAGCACCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CTCGGGGCGCTCTGCGTACTCTGGCCCCACGCCGGATaGCAGCATGCTCACACGAGGGCCCTCCAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LGALCVLWPHAG*QHAHTRALQPF
Trigger: GAAGGGCTGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGGCGTGGGGCCAGAGTACGCAGAGCGCCCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp GGGCCTGTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTaGGCGCTGCCCAGCTGCCTGCAGATCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GPVELPPSSAWP*ALPSCLQIRLW
Trigger: CCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp CCGGATGGCAGCATGCTCACACGAGGGCCCTCCAGCCCTTCCCCGTaGAAGCTGGGAGGGTGGCTTGGGGGCTGGGCCTCGGCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: PDGSMLTRGPSSPSP*KLGGWLGGWASASV
Trigger: CACACTGGCCGAGGCCCAGCCCCCAAGCCACCCTCCCAGCTTCAACGGGGAAGGGCTGGAGGGCCCTCGTGTGAGCATGCTGCCATCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp TGGAACTGGTTGGTGGCGCTGAGCAGCTGGATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTGGGGGCGCTGTCCCGGCGAGCCACC +
Preference number: 6 (lower is better)
Translates to: WNWLVALSSWMGTSL*ASRFSVGALSRRAT
Trigger: GGTGGCTCGCCGGGACAGCGCCCCCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCACCAACCAGTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp GCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTGCGTTaGCGCTCCTGCTCCAGCAGCAGGTTCCCACGCGTC +
Preference number: 6 (lower is better)
Translates to: AARSSRCFSKLR*RSCSSSRFPRV
Trigger: GACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CCAGGGCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTaGGTTGCCGCTCCTGCTCCAGCAGCAGGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: PGPRAPPAASRS*VAAPAPAAGSH
Trigger: GTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGCCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp GCCGGGCTGCCATCGGACAGGAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGTGACAGAGGCAAGGACA +
Preference number: 6 (lower is better)
Translates to: AGLPSDRRVPRG*SLSEAVTEART
Trigger: TGTCCTTGCCTCTGTCACAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCTCCTGTCCGATGGCAGCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS CCA 72 bp GGCCTGTGGAGCTGCCTCCGTCTTCCGCCTGGCCGTTaGCGCTGCCCAGCTGCCTGCAGATCAGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: GLWSCLRLPPGR*RCPAACRSGSG
Trigger: TCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACGGAGGCAGCTCCACAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp GGCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAGCAGGTTCCCACGCGT +
Preference number: 6 (lower is better)
Translates to: GRALLPLLLEVA*PLLLQQQVPTR
Trigger: ACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp TTGGTGGCGCTGAGCAGCTGGATGGGCACATCGCTCTaGGCCAGCCGGTTCTCGGTGGGGGCGCTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LVALSSWMGTSL*ASRFSVGALSR
Trigger: CCGGGACAGCGCCCCCACCGAGAACCGGCTGGCCAAGAGCGATGTGCCCATCCAGCTGCTCAGCGCCACCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp CTTCTCCAGGGCCGCGCGCTCCTCCCGCTGCTTCTCGAAGTTGCGTaGCCGCTCCTGCTCCAGCAGCAGGTTCCCACGCGTCGACTGCAG +
Preference number: 6 (lower is better)
Translates to: LLQGRALLPLLLEVA*PLLLQQQVPTRRLQ
Trigger: CTGCAGTCGACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGAGCGCGCGGCCCTGGAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp CACTGCCCTCCTCCAGGGACTCCTGGCGGCGCTCCTTaGGCCGAGCGAGGAAGTGGCTGTGCGTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: HCPPPGTPGGAP*AERGSGCASPA
Trigger: TGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTCCCTGGAGGAGGGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp ACTCCAGGACGGTGGGCAGACGGGGATCGGATTCCGTaGCTGGCGCCTCCACCTGCGGCGATTCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: TPGRWADGDRIP*LAPPPAAIPQS
Trigger: GCTCTGAGGAATCGCCGCAGGTGGAGGCGCCAGGCACGGAATCCGATCCCCGTCTGCCCACCGTCCTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319670.14
CDS GCA 72 bp AGCAGCAGGTTCCCACGCGTCGACTGCAGCCGGAACTaGTTCTCCCGCTCCTGGATGGCAGCCCGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: SSRFPRVDCSRN*FSRSWMAARCV
Trigger: GACGCAGCGGGCTGCCATCCAGGAGCGGGAGAAGCAGTTCCGGCTGCAGTCGACGCGTGGGAACCTGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CCCTTGGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTaGTGCACGGCCGCCTGCCTCTGGAACTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PLVEAASLVGIC*CTAACLWNWLV
Trigger: CACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp AGCGCTGAGAGCCCCTGCTCTTGCCGCCCTTGTCCTTaGCACCCTTGGTGGAGGCCGCCAGCTTGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: SAESPCSCRPCP*HPWWRPPAWWG
Trigger: TCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTCTCAGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp ACTCCAGGACGGTGGGCAGACGGGGATCGGATTCCGTaGCTGGCGCCTCCACCACCTGCGGCGATTCCTCAG +
Preference number: 6 (lower is better)
Translates to: TPGRWADGDRIP*LAPPPPAAIPQ
Trigger: CTGAGGAATCGCCGCAGGTGGTGGAGGCGCCAGGCACGGAATCCGATCCCCGTCTGCCCACCGTCCTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp GACTCCTGGCGGCGCTCCTTGAGCCGAGCGAGGAAGTaGCTGTGCGTCTCCAGCAGGTCGTCAGCGCATGGG +
Preference number: 6 (lower is better)
Translates to: DSWRRSLSRARK*LCVSSRSSAHG
Trigger: CCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TTGTGCAGTCGTAGCCCGCGAAGGTCTCAGCCCTCCTaGGCGGGCCTGTGGAGCTGCCTCCGTCTTCCGCCT +
Preference number: 6 (lower is better)
Translates to: LCSRSPRRSQPS*AGLWSCLRLPP
Trigger: AGGCGGAAGACGGAGGCAGCTCCACAGGCCCGCCCAGGAGGGCTGAGACCTTCGCGGGCTACGACTGCACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp TCACTGCCCTCCTCCAGGGACTCCTGGCGGCGCTCCTaGAGCCGAGCGAGGAAGTGGCTGTGCGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLPSSRDSWRRS*SRARKWLCVSS
Trigger: GCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCAGGAGTCCCTGGAGGAGGGCAGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp GAGCCCCTGCTCTTGCCGCCCTTGTCCTTGCCACCCTaGGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: EPLLLPPLSLPP*VEAASLVGICC
Trigger: GCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp AGGGCCGGGCTGCCATCGGACAGGAGGGTGCCCCGGGGGTGCTCCTaGAGCGAGGCTGTGACAGAGGCAAGGACAGAGTTGGTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: RAGLPSDRRVPRGCS*SEAVTEARTELVLR
Trigger: TCTCAGCACCAACTCTGTCCTTGCCTCTGTCACAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCTCCTGTCCGATGGCAGCCCGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS TCA 72 bp CTCTCTGCGGGGGTCCCGCCCCCAGAGAGACACCCTTaGGTCCAGGTCTTCAGCCCTCCTCCTGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LSAGVPPPERHP*VQVFSPPPGRF
Trigger: GAACCTGCCAGGAGGAGGGCTGAAGACCTGGACTCAAGGGTGTCTCTCTGGGGGCGGGACCCCCGCAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 72 bp TGGCGGCGCTCCTTGAGCCGAGCGAGGAAGTGGCTGTaGGTCTCCAGCAGGTCGTCAGCGCATGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: WRRSLSRARKWL*VSSRSSAHGKR
Trigger: CCTCTTCCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CGTCTTCCGCCTGGCCGTTGGCGCTGCCCAGCTGCCTaGAGATCAGGCTCTGGATGCCCTCGATCTCGCTCA +
Preference number: 6 (lower is better)
Translates to: RLPPGRWRCPAA*RSGSGCPRSRS
Trigger: TGAGCGAGATCGAGGGCATCCAGAGCCTGATCTGCAGGCAGCTGGGCAGCGCCAACGGCCAGGCGGAAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp GCCGGGCTGCCATCGGACAGGAGGGTGCCCCGGGGGTaGTCCTTGAGCGAGGCTGAGCTCAAGAAAGGTTTG +
Preference number: 6 (lower is better)
Translates to: AGLPSDRRVPRG*SLSEAELKKGL
Trigger: CAAACCTTTCTTGAGCTCAGCCTCGCTCAAGGAGCACCCCCGGGGCACCCTCCTGTCCGATGGCAGCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS CCA 72 bp TCCGAGTTGCGTCCCAGGGCCAGCCGGGCTCGGTGTTaGCTGGGGACCCCCTTTCTGAGAGACCGTCATACC +
Preference number: 6 (lower is better)
Translates to: SELRPRASRARC*LGTPFLRDRHT
Trigger: GGTATGACGGTCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTGGCCCTGGGACGCAACTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TCTGGATCCGCTGGACAAGCTCCGACTCCAGGACGGTaGGCAGACGGGGATCGGATTCCGTGCCTGGCGCCT +
Preference number: 6 (lower is better)
Translates to: SGSAGQAPTPGR*ADGDRIPCLAP
Trigger: AGGCGCCAGGCACGGAATCCGATCCCCGTCTGCCCACCGTCCTGGAGTCGGAGCTTGTCCAGCGGATCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TTGGTGGGGATCTGCTGCTGCACGGCCGCCTGCCTCTaGAACTGGTTGGTGGCGCTGAGCAGCTGGATGGGC +
Preference number: 6 (lower is better)
Translates to: LVGICCCTAACL*NWLVALSSWMG
Trigger: GCCCATCCAGCTGCTCAGCGCCACCAACCAGTTCCAGAGGCAGGCGGCCGTGCAGCAGCAGATCCCCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CCCTGCTCTTGCCGCCCTTGTCCTTGCCACCCTTGGTaGAGGCCGCCAGCTTGGTGGGGATCTGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PCSCRPCPCHPW*RPPAWWGSAAA
Trigger: TGCAGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp AGCCCCTGCTCTTGCCGCCCTTGTCCTTGCCACCCTTaGTGGAGGCCGCCAGCTTGGTGGGGATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SPCSCRPCPCHP*WRPPAWWGSAA
Trigger: AGCAGCAGATCCCCACCAAGCTGGCGGCCTCCACCAAGGGTGGCAAGGACAAGGGCGGCAAGAGCAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CAAACCAGGTCAGGTTCGAGTGGGCTCCTCCGGGGCTaGCTGACATGCAAGCCCTCTGCCGGGCCCCATGGT +
Preference number: 6 (lower is better)
Translates to: QTRSGSSGLLRG*LTCKPSAGPHG
Trigger: ACCATGGGGCCCGGCAGAGGGCTTGCATGTCAGCCAGCCCCGGAGGAGCCCACTCGAACCTGACCTGGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 72 bp GTCCGAGTTGCGTCCCAGGGCCAGCCGGGCTCGGTGTaGGCTGGGGACCCCCTTTCTGAGAGACCGTCATAC +
Preference number: 6 (lower is better)
Translates to: VRVASQGQPGSV*AGDPLSERPSY
Trigger: GTATGACGGTCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTGGCCCTGGGACGCAACTCGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp CCAGCCGGGCTCGGTGTTGGCTGGGGACCCCCTTTCTaGGAGACCGTCATACCGACATTCCTGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: PAGLGVGWGPPF*ETVIPTFLDRA
Trigger: GGCCCTGTCCAGGAATGTCGGTATGACGGTCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TCCTCCCGCTGCTTCTCGAAGTTGCGTTGCCGCTCCTaGTCCAGCAGCAGGTTCCCACGCGTCGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: SSRCFSKLRCRS*SSSRFPRVDCS
Trigger: GCTGCAGTCGACGCGTGGGAACCTGCTGCTGGAGCAGGAGCGGCAACGCAACTTCGAGAAGCAGCGGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CCCGGCGCGGCGCCAGGCTGGGCTGCGCCGTTTTTATaGCTCGGTGGGATCCTTCTAGAAAACAGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: PGAAPGWAAPFL*LGGILLENRAA
Trigger: CGCAGCTCTGTTTTCTAGAAGGATCCCACCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCCGCGCCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS GCA 72 bp TCAGGTTCGAGTGGGCTCCTCCGGGGCTGGCTGACATaGAAGCCCTCTGCCGGGCCCCATGGTACTGTCGAA +
Preference number: 6 (lower is better)
Translates to: SGSSGLLRGWLT*KPSAGPHGTVE
Trigger: TTCGACAGTACCATGGGGCCCGGCAGAGGGCTTGCATGTCAGCCAGCCCCGGAGGAGCCCACTCGAACCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 72 bp GGGCCGGAGAAGGTCCCTTGCAACAGCTGGTGCCCATaGACACACTCCCGCCTCTCTCGTGCATCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GPEKVPCNSWCP*THSRLSRASWP
Trigger: GGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 90 bp GTCTCCAGCAGGTCGTCAGCGCATGGGAAGAGGCGGCCAATGGCCTaGCTGCTGAACTGCAGCTCCTCCTGCAGGGCCCTGGAGTACACC +
Preference number: 6 (lower is better)
Translates to: VSSRSSAHGKRRPMA*LLNCSSSCRALEYT
Trigger: GGTGTACTCCAGGGCCCTGCAGGAGGAGCTGCAGTTCAGCAGCAAGGCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTGCTGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CAA 90 bp AGGTTTGCCACACAGGGGGCAGCTGGAGGGGCCGGAGAAGGTCCCTaGCAACAGCTGGTGCCCATTGACACACTCCCGCCTCTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: RFATQGAAGGAGEGP*QQLVPIDTLPPLSC
Trigger: GCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTGCCCCCTGTGTGGCAAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS TCA 72 bp GCCCCAAGGCCCAGGTCCTGCAGATACTCGCTGCCCTaGAGGGCCCCCAAATCCAGGCTGAGGTCCTCCATA +
Preference number: 6 (lower is better)
Translates to: APRPRSCRYSLP*RAPKSRLRSSI
Trigger: TATGGAGGACCTCAGCCTGGATTTGGGGGCCCTTCAGGGCAGCGAGTATCTGCAGGACCTGGGCCTTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS TCA 72 bp GGCCGGAGAAGGTCCCTTGCAACAGCTGGTGCCCATTaGCACACTCCCGCCTCTCTCGTGCATCCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: GRRRSLATAGAH*HTPASLVHPGP
Trigger: AGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 72 bp CTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTGGTaGCCATTGACACACTCCCGCCTCTCTCGTGCATCC +
Preference number: 6 (lower is better)
Translates to: LEGPEKVPCNSW*PLTHSRLSRAS
Trigger: GGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 72 bp GACCCCCTTTCTGAGAGACCGTCATACCGACATTCCTaGACAGGGCCGGGCTGCCATCGGACAGGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: DPLSERPSYRHS*TGPGCHRTGGC
Trigger: GCACCCTCCTGTCCGATGGCAGCCCGGCCCTGTCCAGGAATGTCGGTATGACGGTCTCTCAGAAAGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp CAGCTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTaGTGCCCATTGACACACTCCCGCCTCTCTCGTGCA +
Preference number: 6 (lower is better)
Translates to: QLEGPEKVPCNS*CPLTHSRLSRA
Trigger: TGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 90 bp CAGCTGGAGGGGCCGGAGAAGGTCCCTTGCAACAGCTGGTGCCCATaGACACACTCCCGCCTCTCTCGTGCATCCTGGCCCTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: QLEGPEKVPCNSWCP*THSRLSRASWPLSF
Trigger: GAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTGTTGCAAGGGACCTTCTCCGGCCCCTCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 90 bp GCGCGGAAGCCCCGCTCCGACTGCGGCCGCAGCACAGACAGGATCTaGGAGGTCAGCAGCTCGTTATCCAAGAAGACGTTCTCGCTCCAT +
Preference number: 6 (lower is better)
Translates to: ARKPRSDCGRSTDRI*EVSSSLSKKTFSLH
Trigger: ATGGAGCGAGAACGTCTTCTTGGATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGGCTTCCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS TCA 72 bp GCCGGGCAGGATAGGGCTCAGCGAGCGGCGGTTCCGTaGGGTGCTCTCATCTTTCCCCATGAGCTTGTTGAG +
Preference number: 6 (lower is better)
Translates to: AGQDRAQRAAVP*GALIFPHELVE
Trigger: CTCAACAAGCTCATGGGGAAAGATGAGAGCACCTCACGGAACCGCCGCTCGCTGAGCCCTATCCTGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp GGCTCTTCCCCTTCTCCTTCTGCCTGGTCACTCGACTaGGGAGGCAGCTCAGCCTGCGCTTCACACTGGTAC +
Preference number: 6 (lower is better)
Translates to: GSSPSPSAWSLD*GGSSACASHWY
Trigger: GTACCAGTGTGAAGCGCAGGCTGAGCTGCCTCCGCAGTCGAGTGACCAGGCAGAAGGAGAAGGGGAAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 72 bp GAAGTGGCTGTGCGTCTCCAGCAGGTCGTCAGCGCATaGGAAGAGGCGGCCAATGGCCTTGCTGCTGAACTG +
Preference number: 6 (lower is better)
Translates to: EVAVRLQQVVSA*EEAANGLAAEL
Trigger: CAGTTCAGCAGCAAGGCCATTGGCCGCCTCTTCCCATGCGCTGACGACCTGCTGGAGACGCACAGCCACTTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp GGCTCTGGATGCCCTCGATCTCGCTCATGGCCGACTTaGGAATTAGCTCCCCCTGCAGGGTCTCGGATGGGT +
Preference number: 6 (lower is better)
Translates to: GSGCPRSRSWPT*ELAPPAGSRMG
Trigger: ACCCATCCGAGACCCTGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGAGATCGAGGGCATCCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CAGCTGGTGCCCATTGACACACTCCCGCCTCTCTCGTaGATCCTGGCCCTTGTCCTTCAGATGTGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: QLVPIDTLPPLS*ILALVLQMCWA
Trigger: AGCCCAGCACATCTGAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 72 bp TCCACGGCGAGGCTCCAGGACTCAGCTTCAAACTCGTaGCCGTCTGACTCAATCTCACTCCTCAGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: STARLQDSASNS*PSDSISLLSEA
Trigger: CGCCTCGCTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGAGTCCTGGAGCCTCGCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TCATGCTCAACCGCTCTTGAAAGTCCCGGAGTCTCGTaGCGCGGGCCTCGACCACCTTCCTTTCCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: SCSTALESPGVS*RGPRPPSFPLR
Trigger: CCGAAGAGGAAAGGAAGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TACGGCCAGCGTTTCGAGCTGGCCCAAGGGAACCGCTaGCTGGGTAGAGCCTGGGATAACCACAGAATGACC +
Preference number: 6 (lower is better)
Translates to: YGQRFELAQGNR*LGRAWDNHRMT
Trigger: GGTCATTCTGTGGTTATCCCAGGCTCTACCCAGCCAGCGGTTCCCTTGGGCCAGCTCGAAACGCTGGCCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS CAA 72 bp AGGCTCTGGATGCCCTCGATCTCGCTCATGGCCGACTaGAGAATTAGCTCCCCCTGCAGGGTCTCGGATGGG +
Preference number: 6 (lower is better)
Translates to: RLWMPSISLMAD*RISSPCRVSDG
Trigger: CCCATCCGAGACCCTGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGAGATCGAGGGCATCCAGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CAA 72 bp CCCCGCTCCGACTGCGGCCGCAGCACAGACAGGATCTaGGAGGTCAGCAGCTCGTTATCCAAGAAGACGTTC +
Preference number: 6 (lower is better)
Translates to: PRSDCGRSTDRI*EVSSSLSKKTF
Trigger: GAACGTCTTCTTGGATAACGAGCTGCTGACCTCCAAGATCCTGTCTGTGCTGCGGCCGCAGTCGGAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359920.11
ENST00000617428.4
CDS CAA 90 bp TGGTGCCCATTGACACACTCCCGCCTCTCTCGTGCATCCTGGCCCTaGTCCTTCAGATGTGCTGGGCTCTTCCCCTTCTCCTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: WCPLTHSRLSRASWP*SFRCAGLFPFSFCL
Trigger: CAGGCAGAAGGAGAAGGGGAAGAGCCCAGCACATCTGAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAATGGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS TCA 72 bp GAGGCTCCAGGACTCAGCTTCAAACTCGTGGCCGTCTaGCTCAATCTCACTCCTCAGCGAGGCGGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: EAPGLSFKLVAV*LNLTPQRGGVG
Trigger: CCCTACACCGCCTCGCTGAGGAGTGAGATTGAGTCAGACGGCCACGAGTTTGAAGCTGAGTCCTGGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp TTCCAGCATAGCATGCCCTCCAGGTGGAGCTGCCGCTaGAGCATGTCTTCCTTGCGGAAGGTGAGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: FQHSMPSRWSCR*SMSSLRKVSPF
Trigger: GAACGGGCTCACCTTCCGCAAGGAAGACATGCTTCAGCGGCAGCTCCACCTGGAGGGCATGCTATGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp ATCTCGCTCATGGCCGACTTGAGAATTAGCTCCCCCTaGAGGGTCTCGGATGGGTCCCCTCCACGGAATAGG +
Preference number: 6 (lower is better)
Translates to: ISLMADLRISSP*RVSDGSPPRNR
Trigger: CCTATTCCGTGGAGGGGACCCATCCGAGACCCTGCAGGGGGAGCTAATTCTCAAGTCGGCCATGAGCGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp TTCAGGTCCATCTTCCCTGCGATCTCCCTGAGGCGCTaGCCCTTCTCACACTCACTGACCTTGGCGTCCACT +
Preference number: 6 (lower is better)
Translates to: FRSIFPAISLRR*PFSHSLTLAST
Trigger: AGTGGACGCCAAGGTCAGTGAGTGTGAGAAGGGCCAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp GGCGCCAGGCTGGGCTGCGCCGTTTTTATGCCTCGGTaGGATCCTTCTAGAAAACAGAGCTGCGTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GARLGCAVFMPR*DPSRKQSCVFP
Trigger: AGGGAAGACGCAGCTCTGTTTTCTAGAAGGATCCCACCGAGGCATAAAAACGGCGCAGCCCAGCCTGGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS CAA 72 bp TTGACACACTCCCGCCTCTCTCGTGCATCCTGGCCCTaGTCCTTCAGATGTGCTGGGCTCTTCCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LTHSRLSRASWP*SFRCAGLFPFS
Trigger: GGAGAAGGGGAAGAGCCCAGCACATCTGAAGGACAAGGGCCAGGATGCACGAGAGAGGCGGGAGTGTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CCA 72 bp CGCGACCTTTCCCAGCTGCGCCGCCTTGACAGGTCTTaGGACCCTGCCAAGCTGGAGAAAAGAGAATCTCTT +
Preference number: 6 (lower is better)
Translates to: RDLSQLRRLDRS*DPAKLEKRESL
Trigger: AAGAGATTCTCTTTTCTCCAGCTTGGCAGGGTCCCAAGACCTGTCAAGGCGGCGCAGCTGGGAAAGGTCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 72 bp GCCACAGCTCCAGAGTCAAAAGGCTGGACACATGACTaGGGCTCAGAGCCTCTCTTGAAGGCCCACCGCTTC +
Preference number: 6 (lower is better)
Translates to: ATAPESKGWTHD*GSEPLLKAHRF
Trigger: GAAGCGGTGGGCCTTCAAGAGAGGCTCTGAGCCCAAGTCATGTGTCCAGCCTTTTGACTCTGGAGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671891.2
CDS CAA 72 bp AGCCCTCTGCCGGGCCCCATGGTACTGTCGAAGTTCTaGAAGCACCTGCTGGACAATCAGCACGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: SPLPGPMVLSKF*KHLLDNQHVIW
Trigger: CCAGATCACGTGCTGATTGTCCAGCAGGTGCTTCAAGAACTTCGACAGTACCATGGGGCCCGGCAGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 72 bp CTTGAGTTTGCTGGAAGACTTCAGGTCCATCTTCCCTaGGATCTCCCTGAGGCGCTGGCCCTTCTCACACTC +
Preference number: 6 (lower is better)
Translates to: LEFAGRLQVHLP*DLPEALALLTL
Trigger: GAGTGTGAGAAGGGCCAGCGCCTCAGGGAGATCGCAGGGAAGATGGACCTGAAGTCTTCCAGCAAACTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CTTTCAAGCGCCCTGATGTGGTCTTCCAGCATAGCATaGCCTCCAGGTGGAGCTGCCGCTGAAGCATGTCTT +
Preference number: 6 (lower is better)
Translates to: LSSALMWSSSIA*PPGGAAAEACL
Trigger: AAGACATGCTTCAGCGGCAGCTCCACCTGGAGGGCATGCTATGCTGGAAGACCACATCAGGGCGCTTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp CTCTCATCTTTCCCCATGAGCTTGTTGAGCAGCAGCTaGTGCTTCAGGTCGAAGGACGCTGAGCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LSSFPMSLLSSS*CFRSKDAELSQ
Trigger: CTGGGAGAGCTCAGCGTCCTTCGACCTGAAGCAGCAGCTGCTGCTCAACAAGCTCATGGGGAAAGATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp ATAGCACCTCGACTTCCTCTTTCTCAACTGCCTGCCTaGATGCTTGCCACTCTGCTCCCAGCTGCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: IAPRLPLSQLPA*MLATLLPAAGQ
Trigger: TTGGCCTGCAGCTGGGAGCAGAGTGGCAAGCATGCAGGCAGGCAGTTGAGAAAGAGGAAGTCGAGGTGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS GCA 72 bp TGGGCTCAGAGCCAGATAGAGCTCAGTTCTTCAACCTaGAGGCACCTAGCCTGGCTAACAGCTCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: WAQSQIELSSST*RHLAWLTAPAA
Trigger: AGCTGCAGGAGCTGTTAGCCAGGCTAGGTGCCTGCAGGTTGAAGAACTGAGCTCTATCTGGCTCTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS TCA 72 bp CTCAGGTTTCCAGGATCCACTGCTGCTCTTGGTGGCTaGAGCCACAGCTCCAGAGTCAAAAGGCTGGACACA +
Preference number: 6 (lower is better)
Translates to: LRFPGSTAALGG*SHSSRVKRLDT
Trigger: TGTGTCCAGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAGTGGATCCTGGAAACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS GCA 72 bp TTTCACCACCTCCCTCTTTTGCTTCTTGGCGTAGGCTaGATCCACGGCGAGGCTCCAGGACTCAGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: FHHLPLLLLGVG*IHGEAPGLSFK
Trigger: TTTGAAGCTGAGTCCTGGAGCCTCGCCGTGGATGCAGCCTACGCCAAGAAGCAAAAGAGGGAGGTGGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000595600.1
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TTGGTTATGCGTTGTGTAACCAGGAGAATGCACTCCTaGACGCCAAGCCGCCGCACGATGGAGAAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: LVMRCVTRRMHS*TPSRRTMEKLP
Trigger: TGGCAACTTCTCCATCGTGCGGCGGCTTGGCGTGCAGGAGTGCATTCTCCTGGTTACACAACGCATAACCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp TCTCTAGGAGGCTCTGTGCGATCAGCTGGTCTTTCATaGTCAACCGCTCTTGAAAGTCCCGGAGTCTCGTGG +
Preference number: 6 (lower is better)
Translates to: SLGGSVRSAGLS*STALESPGVSW
Trigger: CCACGAGACTCCGGGACTTTCAAGAGCGGTTGAGCATGAAAGACCAGCTGATCGCACAGAGCCTCCTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp GCTCGTTATCCAAGAAGACGTTCTCGCTCCATTTCCTaGGGAAAGAGCCGTAAAAAGACAGCTCGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: ARYPRRRSRSIS*GKSRKKTARGG
Trigger: GCCGCCCCGAGCTGTCTTTTTACGGCTCTTTCCCCAGGAAATGGAGCGAGAACGTCTTCTTGGATAACGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS CAA 90 bp GAGAAGAAGTCTGGGTTCTCAGGTTTCCAGGATCCACTGCTGCTCTaGGTGGCTGAAGCCACAGCTCCAGAGTCAAAAGGCTGGACACAT +
Preference number: 6 (lower is better)
Translates to: EKKSGFSGFQDPLLL*VAEATAPESKGWTH
Trigger: ATGTGTCCAGCCTTTTGACTCTGGAGCTGTGGCTTCAGCCACCAAGAGCAGCAGTGGATCCTGGAAACCTGAGAACCCAGACTTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS TCA 72 bp GACAGGAACTGTGTGGCAGCCGCGAGAGAGCGGAGATaGCCATACCTTCTACAAAAATGGACTCGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: DRNCVAAARERR*PYLLQKWTRCL
Trigger: CAAACACCGAGTCCATTTTTGTAGAAGGTATGGTCATCTCCGCTCTCTCGCGGCTGCCACACAGTTCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595600.1
CDS TCA 72 bp ACCGCTGGCTGGGTAGAGCCTGGGATAACCACAGAATaGCCCAATAGCACCTCGACTTCCTCTTTCTCAACT +
Preference number: 6 (lower is better)
Translates to: TAGWVEPGITTE*PNSTSTSSFST
Trigger: AGTTGAGAAAGAGGAAGTCGAGGTGCTATTGGGTCATTCTGTGGTTATCCCAGGCTCTACCCAGCCAGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668164.2
CDS GCA 72 bp TCAGCACGTGATCTGGTTCCACATGGTCTTTTTCCATaGACTCCAGCACTGGAGGTTCCAGGCCTTGAACAG +
Preference number: 6 (lower is better)
Translates to: SARDLVPHGLFP*TPALEVPGLEQ
Trigger: CTGTTCAAGGCCTGGAACCTCCAGTGCTGGAGTGCATGGAAAAAGACCATGTGGAACCAGATCACGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000668164.2
ENST00000671891.2
CDS CAA 90 bp TCCCTTGCTGTATTGGCTGAAGCAGCGGGTCTGGAGGGCAGGATATaGGTCCCCACTGTGACCATTTACTGTGGAAATTGCAGTATTTGC +
Preference number: 6 (lower is better)
Translates to: SLAVLAEAAGLEGRI*VPTVTIYCGNCSIC
Trigger: GCAAATACTGCAATTTCCACAGTAAATGGTCACAGTGGGGACCAATATCCTGCCCTCCAGACCCGCTGCTTCAGCCAATACAGCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS TCA 72 bp GCCCTTCTCACACTCACTGACCTTGGCGTCCACTTGTaGGATGATATCTTTGATGAGGTTCAAGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: ALLTLTDLGVHL*DDIFDEVQGLG
Trigger: ACCCAGGCCTTGAACCTCATCAAAGATATCATCTCACAAGTGGACGCCAAGGTCAGTGAGTGTGAGAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp CAGCGGGTCTGGAGGGCAGGATATTGGTCCCCACTGTaGCCATTTACTGTGGAAATTGCAGTATTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: QRVWRAGYWSPL*PFTVEIAVFAA
Trigger: AGCAGCAAATACTGCAATTTCCACAGTAAATGGTCACAGTGGGGACCAATATCCTGCCCTCCAGACCCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS CAA 72 bp GTGTTCTGGATGATGCGCTCCACCAGCACTGGGTATTaGGTTATGCGTTGTGTAACCAGGAGAATGCACTCC +
Preference number: 6 (lower is better)
Translates to: VFWMMRSTSTGY*VMRCVTRRMHS
Trigger: GGAGTGCATTCTCCTGGTTACACAACGCATAACCAAATACCCAGTGCTGGTGGAGCGCATCATCCAGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS CCA 72 bp AGCTTCCGTGTTCTGGATGATGCGCTCCACCAGCACTaGGTATTTGGTTATGCGTTGTGTAACCAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: SFRVLDDALHQH*VFGYALCNQEN
Trigger: ATTCTCCTGGTTACACAACGCATAACCAAATACCCAGTGCTGGTGGAGCGCATCATCCAGAACACGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS TCA 72 bp GAGCTGTTTGAGTTTGCTGTAAATAGTCTAAGATCATaGAACGGTGAGCCTGGCGTGCTTCATGCCAAAACC +
Preference number: 6 (lower is better)
Translates to: ELFEFAVNSLRS*NGEPGVLHAKT
Trigger: GGTTTTGGCATGAAGCACGCCAGGCTCACCGTTTCATGATCTTAGACTATTTACAGCAAACTCAAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359920.11
CDS GCA 72 bp TTTGGAGATGTAAGGGACAGAGAGTCATCAGCTGTCTaGTTAAATTTTAAAAACGCAGAATCGGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: FGDVRDRESSAV*LNFKNAESASS
Trigger: GGATGAAGCCGATTCTGCGTTTTTAAAATTTAAGCAGACAGCTGATGACTCTCTGTCCCTTACATCTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319670.14
ENST00000359920.11
ENST00000594665.2
ENST00000617428.4
ENST00000668164.2
CDS GCA 72 bp ATATTGGTCCCCACTGTGACCATTTACTGTGGAAATTaGAGTATTTGCTGCTTTGATAGAATAAAACAGAAA +
Preference number: 6 (lower is better)
Translates to: ILVPTVTIYCGN*SICCFDRIKQK
Trigger: TTTCTGTTTTATTCTATCAAAGCAGCAAATACTGCAATTTCCACAGTAAATGGTCACAGTGGGGACCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359920.11