RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF16 (Homo sapiens)

Ensembl gene IDs: ENSG00000130762

Ensembl transcript IDs: ENST00000378371.6, ENST00000378373.5, ENST00000378378.9, ENST00000418137.1, ENST00000445297.5, ENST00000464620.1, ENST00000485984.1

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: PSVKCLEPGTTATGS*EAPGNHAGSLRPAP
Trigger: GGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR GCA 90 bp GGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTaGCTCCTGTGCCCATCAGTCCAGGTGGAGTTGCCCCCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: GHRRRPRIAPNNRYW*LLCPSVQVELPPGC
Trigger: GCACCCAGGGGGCAACTCCACCTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CCA 90 bp GAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTaGTGCCTCCTGTGCCCATCAGTCCAGGTGGAGTTGCCCCCTGGG +
Preference number: 1 (lower is better)
Translates to: EGHRRRPRIAPNNRY*CLLCPSVQVELPPG
Trigger: CCCAGGGGGCAACTCCACCTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTAGCCCCAGGGAACCATaGTGGGTCCTTGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: PPAGPFSERGALLGTQGPSPREP*WVLETS
Trigger: GCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCT...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLIGWAP*DTVWPP
Trigger: AGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTAT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: PPAGPFSERGALLGTQGPRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGTGATCTTCCTTCCGTaGAGTGTCTGGAGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVVIFLP*SVWSPA
Trigger: TGCCGGGCTCCAGACACTTCACGGAAGGAAGATCAC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCCCAGGGAACCATGCTaGGTCCTTGAGACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLPREPC*VLETSS
Trigger: GGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCAT +
Preference number: 2 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLTATGS*EAPGNH
Trigger: ATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CAA 90 bp TCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SFREVSGARHHSHRL*GSPREPCWVLETSS
Trigger: GGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGTATTGGTGCCTCCTGTaGCCATCAGTCCAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLYWCLL*PSVQVE
Trigger: CTCCACCTGGACTGATGGGCACAGGAGGCACCAATA...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGGTGCAGTGGGGAGGTaGGGCCCAGCAGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIGAVGR*GPAAEG
Trigger: CCCCTCAGCTGCTGGGCCCCACCTCCCCACTGCACC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: LLGSPREPCWVLETSSPRGTTTC*LETGCA
Trigger: AGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCC...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 2 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCTGGCCCCCTCGAGCTTaGCTGGGGGTGCCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: DLALPPIIAIGASCAHQSWPPRA*LGVPLW
Trigger: CCAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCA...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGGTGCAGTGGGGAGGTaGGGCCCAGCAGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASGAVGR*GPAAEG
Trigger: CCCCTCAGCTGCTGGGCCCCACCTCCCCACTGCACC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTACCATGCTGGGTCCTTaGGACCAGCTCCCCACGCTC +
Preference number: 2 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSTMLGP*DQLPTL
Trigger: GAGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGT...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 2 (lower is better)
Translates to: DLALPPIIAIGASCAHQSIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCAGTCCAGGTGGAGTTaGCCCCTGGGTGCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIQSRWS*PLGAVG
Trigger: CCCCACTGCACCCAGGGGGCAACTCCACCTGGACTG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIIGWAP*DTVWPP
Trigger: AGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTAT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAGTTTC*LETGCA
Trigger: AGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCC...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASIGWAP*DTVWPP
Trigger: AGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTAT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCCAACGGGAATAGGCTaGGCTCCCTGGGACACGGTG +
Preference number: 2 (lower is better)
Translates to: DLALPPIIAIGASCAHQSPTGIG*APWDTV
Trigger: CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCCAACGGGAATAGGCTaGGCTCCCTGGGACACGGTG +
Preference number: 2 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQPTGIG*APWDTV
Trigger: CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCACCATGCTGGGTCCTTaGGACCAGCTCCCCACGCTC +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASTMLGP*DQLPTL
Trigger: GAGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CAA 90 bp CTTGTCCCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCC +
Preference number: 2 (lower is better)
Translates to: LVPLRGRKGIGGDLA*PPIIAIGASCAHQS
Trigger: GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCAGCCCCAGGGAACCATaGTGGGTCCTTGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASSPREP*WVLETS
Trigger: GCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: DLALPPIIAIGASCAHQSRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGCCCATCAGTCCAGGTaGAGTTGCCCCCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIAHQSR*SCPLGA
Trigger: TGCACCCAGGGGGCAACTCCACCTGGACTGATGGGC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCTGGGGGTGCCTCTCTaGGGACATGTGATCTTCCTT +
Preference number: 2 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQLGVPL*GHVIFL
Trigger: AAGGAAGATCACATGTCCCCAGAGAGGCACCCCCAG...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIGTTTC*LETGCA
Trigger: AGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCTCTCTGGGGACATGTaGTCTTCCTTCCGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: PLRGRKGIGGDLALPPIILSGDM*SSFREV
Trigger: CACTTCACGGAAGGAAGATCACATGTCCCCAGAGAG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCTCTCTGGGGACATGTaGTCTTCCTTCCGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: KGIGGDLALPPIIAIGASLSGDM*SSFREV
Trigger: CACTTCACGGAAGGAAGATCACATGTCCCCAGAGAG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCTGGGGGTGCCTCTCTaGGGACATGTGATCTTCCTT +
Preference number: 2 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILGVPL*GHVIFL
Trigger: AAGGAAGATCACATGTCCCCAGAGAGGCACCCCCAG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CCA 72 bp GGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCTCGAGCTTGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: GPSQPTGIGWAP*DTVWPPRACLG
Trigger: CCCCAGGCAAGCTCGAGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CCA 72 bp CCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGTaGCCCCCTCGAGCTTGCCTGGGGGTGCCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: PTGIGWAPWDTV*PPRACLGVPLW
Trigger: CCAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCCAGGCACGACCACTaGCTGATTGGAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: PPAGPFSERGALLGTQGPARHDH*LIGDRL
Trigger: CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGAACCATGCTGGGTCCTaGAGACCAGCTCCCCACGCT +
Preference number: 3 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLNHAGS*RPAPHA
Trigger: AGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR TCA 72 bp TCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCTGCCGCCGGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPRSLEPGTTTC*LETGCAAAGWP
Trigger: AGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGTGGCCCCCTCGAGCTaGCCTGGGGGTGCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQVAPSS*PGGASL
Trigger: CAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCAC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATT +
Preference number: 3 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLGGDLA*PPIIAI
Trigger: AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CCA 72 bp AAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: KCLEPGTTATGS*EAPGNHAGSLR
Trigger: TCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR GCA 72 bp CGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTaGCCATCAGTCCAGGTGGAGTTGCCCCCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: RIAPNNRYWCLL*PSVQVELPPGC
Trigger: GCACCCAGGGGGCAACTCCACCTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCA +
Preference number: 3 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIHSHRL*GSPREP
Trigger: TGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCA +
Preference number: 3 (lower is better)
Translates to: DLALPPIIAIGASCAHQSHSHRL*GSPREP
Trigger: TGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGCCAGGCACGACCACTaGCTGATTGGAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQARHDH*LIGDRL
Trigger: CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAACCATGCTGGGTCCTaGAGACCAGCTCCCCACGCT +
Preference number: 3 (lower is better)
Translates to: DLALPPIIAIGASCAHQSNHAGS*RPAPHA
Trigger: AGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCA +
Preference number: 3 (lower is better)
Translates to: KGIGGDLALPPIIAIGASHSHRL*GSPREP
Trigger: TGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGCCAGGCACGACCACTaGCTGATTGGAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: KGIGGDLALPPIIAIGASARHDH*LIGDRL
Trigger: CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR GCA 72 bp AGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTaGCTCCTGTGCCCATCAGTCCAGGTGGAGTTGCCC +
Preference number: 3 (lower is better)
Translates to: RRPRIAPNNRYW*LLCPSVQVELP
Trigger: GGGCAACTCCACCTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
3UTR CCA 72 bp AGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTaGTGCCTCCTGTGCCCATCAGTCCAGGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: RRRPRIAPNNRY*CLLCPSVQVEL
Trigger: CAACTCCACCTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGGAGCTGGCTCCAGGTaGCCTGGGCGGGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPGAGSR*PGRAGS
Trigger: GCTACCGGCCCGCCCAGGTCACCTGGAGCCAGCTCC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGGCCATGGCTCCTCGTaGCCCGGGGGCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPGHGSS*PGGRGC
Trigger: ACAGCCTCGGCCCCCGGGGCACGAGGAGCCATGGCC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGGTGCAGTGGGGAGGTaGGGCCCAGCAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPGAVGR*GPAAEG
Trigger: CCCCTCAGCTGCTGGGCCCCACCTCCCCACTGCACC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCGGAGGAGCTACGGTTaGCGCCCCCGGGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVRRSYG*RPRAEG
Trigger: TCCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCGCCACGATCCACCGTaGCCGGTCACTCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPRHDPP*PVTRGV
Trigger: GACTCCGCGAGTGACCGGGCACGGTGGATCGTGGCG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTGGCCCCCTCGAGCTTaGCTGGGGGTGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPWPPRA*LGVPLW
Trigger: CCAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCTTTGGGAGGGGACTaGCCCAGGCTGGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPALGGD*PRLGTS
Trigger: ACTGGTGCCCAGCCTGGGGCAGTCCCCTCCCAAAGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGAGGAGAGCAGGAGCTaGTCCTGGCGGCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVEESRS*SWRPSL
Trigger: CAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCTC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCCATCCTGCGGACATTaGCCTCCACGGCCACACGGC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPPSCGH*PPRPHG
Trigger: GCCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCGGGCTGGGGTCTTTaGCTTGCTGGCCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPAGWGL*LAGHSQ
Trigger: CTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGGTTCCGCCTCAGCATaGCCCCGGGGTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPGSASA*PRGPCP
Trigger: TGGACAAGGACCCCGGGGGCATGCTGAGGCGGAACC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTGCCCACGGCGATTCTaGCCTGGGACCCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPCPRRF*PGTPET
Trigger: GGTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCTCTGGTGGCGGGCTaGGGTCTTTGCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPALVAG*GLCLAG
Trigger: GCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCGGGCCGGTAGCTCTTaGCCACAATGGTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPRAGSS*PQWWRP
Trigger: TGGACGCCACCATTGTGGTCAAGAGCTACCGGCCCG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCGCCACGATCCACCGTaGCCGGTCACTCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLRHDPP*PVTRGV
Trigger: GACTCCGCGAGTGACCGGGCACGGTGGATCGTGGCG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCCATCCTGCGGACATTaGCCTCCACGGCCACACGGC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVPSCGH*PPRPHG
Trigger: GCCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGTGGTGGTGCTCCATCTaGGTCACGGTCGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVWWCSI*VTVARS
Trigger: GCTGCGGGCGACCGTGACCCAGATGGAGCACCACCA...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTACGGCGATTCTGCCCTaGGACCCCAGAGACCTCTCG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPTAILP*DPRDLS
Trigger: CGAGAGGTCTCTGGGGTCCCAGGGCAGAATCGCCGT...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR TCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCGGGCCGGTAGCTCTTaGCCACAATGGTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVRAGSS*PQWWRP
Trigger: TGGACGCCACCATTGTGGTCAAGAGCTACCGGCCCG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCCCCCTCGTTGCACTaGCTCACCAGCTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPAPSLH*LTSLLM
Trigger: CATCAGCAAGCTGGTGAGGCAGTGCAACGAGGGGGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCGGAGGAGCTACGGTTaGCGCCCCCGGGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRRSYG*RPRAEG
Trigger: TCCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCAGTCCAGGTGGAGTTaGCCCCTGGGTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLQSRWS*PLGAVG
Trigger: CCCCACTGCACCCAGGGGGCAACTCCACCTGGACTG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCGTCATCAGACTCCTaGCTGGTGTTCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPSSSDS*LVFRPR
Trigger: GCGGGGCCTGAACACCAGCCAGGAGTCTGATGACGA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCAGGTCTCCTTTGCTaGAGAGGCCCTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPAGLLC*RGPATV
Trigger: GACAGTGGCAGGGCCTCTCCAGCAAAGGAGACCTGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCTGTGCTGCCGCCGGCTaGCCTCGCCAGGGCTACACG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRCAAAG*PRQGYT
Trigger: CGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACA...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGGAGCCACGGACCATTaGGAGCCCGGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLGATDH*EPGGWV
Trigger: AACCCAGCCTCCGGGCTCCCAATGGTCCGTGGCTCC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCGGGCCGGTAGCTCTTaGCCACAATGGTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLRAGSS*PQWWRP
Trigger: TGGACGCCACCATTGTGGTCAAGAGCTACCGGCCCG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGCCTCACCAGCTTGCTaGTGGCCTTCAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLASPAC*WPSVHG
Trigger: GCCGTGCACTGAAGGCCATCAGCAAGCTGGTGAGGC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGTCTCTCACTGTGTGTaGGCGCCACGATCCACCGTG +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVVSHCV*APRSTV
Trigger: CACGGTGGATCGTGGCGCTCACACACAGTGAGAGAC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPGTTTC*LETGCA
Trigger: AGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGCTGGGGGTCGTCCTTaGAGGAACCCTTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLAGGRP*RNPCAH
Trigger: GTGGGCACAAGGGTTCCTTCAAGGACGACCCCCAGC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCGCCACGATCCACCGTaGCCGGTCACTCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRHDPP*PVTRGV
Trigger: GACTCCGCGAGTGACCGGGCACGGTGGATCGTGGCG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGAGCCACCCATCCTCCTaGTGCAGAACCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVSHPSS*CRTRTT
Trigger: CGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTGGCT...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGGGTCACCCGCTGCATaGGGAGGATCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVGSPAA*GGSGRR
Trigger: TCTCCTTCCTGATCCTCCCCATGCAGCGGGTGACCC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCCTTCAGTGCACGGCTaGCAGCCTTGTACCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPPSVHG*QPCTFR
Trigger: CCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGATGCGCTCCATCCTGTaGGCCCCCTCGTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLMRSIL*APSLHC
Trigger: GCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCAT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGCAGGTCTCCTTTGCTaGAGAGGCCCTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVAGLLC*RGPATV
Trigger: GACAGTGGCAGGGCCTCTCCAGCAAAGGAGACCTGC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCCCAGGGAACCATGCTaGGTCCTTGAGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVPREPC*VLETSS
Trigger: GGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPTATGS*EAPGNH
Trigger: ATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGT...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCCCTGGGACACGGTGTaGCCCCCTCGAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRPWDTV*PPRACL
Trigger: CAGGCAAGCTCGAGGGGGCCACACCGTGTCCCAGGG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGGGGTGCCGGGACCTaGGGCTGGAAGGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGGAGT*GWKAAS
Trigger: CGATGCCGCCTTCCAGCCCCAGGTCCCGGCACCCCC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTAGGAGAACTCCGACGTaGGGATCTCGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPRRTPT*GSRTWP
Trigger: AGGCCATGTTCGAGATCCTCACGTCGGAGTTCTCCT...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGAGAAGAGGTGGTGGTaGTCCATCTGGGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVEKRWW*SIWVTV
Trigger: GACCGTGACCCAGATGGAGCACCACCACCTCTTCTC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGGCTGATGGCCTTCAGTaGACGGCTGGCAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVADGLQ*TAGSLV
Trigger: TACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAGC...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCGGAGGAGCTACGGTTaGCGCCCCCGGGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTARRSYG*RPRAEG
Trigger: TCCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCAGTGTGACCTCGTCTaGTTGCTTCGCGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPQCDLV*LLREEG
Trigger: GCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAGTGCCGCTGGGCCATaGTGGGCGGCTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTASAAGP*WAAVGS
Trigger: GGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGCTCTCACGGCTGTGTaGGAGAGGGAGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLALTAV*EREALG
Trigger: TCCCAAAGCCTCCCTCTCCCACACAGCCGTGAGAGC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCTTTCGGAGTGGCCCTaGGTCTTGAGGCAGAGCGTA +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVLSEWP*VLRQSV
Trigger: TACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTTGGTGATCTCCACCTaGGGCAGGTCTCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPLVIST*GRSPLL
Trigger: CAGCAAAGGAGACCTGCCCCAGGTGGAGATCACCAA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTGTGCTGCCGCCGGCTaGCCTCGCCAGGGCTACACG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTACAAAG*PRQGYT
Trigger: CGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGTGCAGTGGGGAGGTaGGGCCCAGCAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGAVGR*GPAAEG
Trigger: CCCCTCAGCTGCTGGGCCCCACCTCCCCACTGCACC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGGAGCTGGCTCCAGGTaGCCTGGGCGGGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIGAGSR*PGRAGS
Trigger: GCTACCGGCCCGCCCAGGTCACCTGGAGCCAGCTCC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCCGCCTGCTGCAGTGTaGCCTCGTCTGCTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRPPAAV*PRLLAS
Trigger: CGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCGTGGCCCTGGGGGATTaGAAAAGGCTGCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRVALGD*KRLRLP
Trigger: AGGGAGGCGCAGCCTTTTGCAATCCCCCAGGGCCAC...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR GCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGTCAGCTTCTGCAGCGTaGGCTGTTGGTAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVSASAA*AVGRPR
Trigger: ACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGA...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTAAGTCCAGCTGTGTGTaGAGCGTGTACATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPKSSCV*SVYICS
Trigger: GGAGCAGATGTACACGCTGCACACACAGCTGGACTT...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCAAACCGAAATCTCCCTaGCGGGTCCCCTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRKPKSP*RVPSLR
Trigger: CCGGAGGGAGGGGACCCGGCAGGGAGATTTCGGTTT...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGTTTTCCGCTCCTCAGTaGAGAGCTGGTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVFSAPQ*RAGPGC
Trigger: GCATCCTGGACCAGCTCTCCACTGAGGAGCGGAAAA...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTCAGGAAGGAGAGCATaGGCAGGCCCCCGCACGCCG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTASGRRA*AGPRTP
Trigger: CGGCGTGCGGGGGCCTGCCCATGCTCTCCTTCCTGA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTCAGGAAGGAGAGCATaGGCAGGCCCCCGCACGCCG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLSGRRA*AGPRTP
Trigger: CGGCGTGCGGGGGCCTGCCCATGCTCTCCTTCCTGA...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGCCCCGAAGCTCTGGTaGCGGGCTGGGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLAPKLW*RAGVFA
Trigger: GGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGCCGCCCCGAAGCTCTaGTGGCGGGCTGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLAAPKL*WRAGVF
Trigger: AAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378378.9
3UTR CAA 72 bp GAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: EVSGARHHSHRL*GSPREPCWVLE
Trigger: CTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCGAAGAAGGCCTTGGTaGTCTCCACCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRRRPW*SPPGAG
Trigger: ACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCTCTCTGGGGACATGTaGTCTTCCTTCCGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVLSGDM*SSFREV
Trigger: CACTTCACGGAAGGAAGATCACATGTCCCCAGAGAG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGCCGGGCTCCGAGTATaGGGCTGGCTGGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLAGLRV*GWLGSS
Trigger: TGAGGAACCCAGCCAGCCTCATACTCGGAGCCCGGC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGTCGAACATGGCCTCCTaGCTTTTCCGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLSNMAS*LFRSSV
Trigger: CACTGAGGAGCGGAAAAGGCAGGAGGCCATGTTCGA...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCGCAGCTCCTTGGACTaGAGGAACTCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRSSLD*RNSSTR
Trigger: CCTGGTGGAGGAGTTCCTGCAGTCCAAGGAGCTGCG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGAGCACCTGGGCCTTGTaGCGCTGCTCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLSTWAL*RCSRSS
Trigger: CGAGGACCTGGAGCAGCGGCACAAGGCCCAGGTGCT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGCGGCCCTCGCTGTTaGGAAGCAGGGTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGGPRC*EAGSPG
Trigger: TCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGAGGAGAGCAGGAGCTaGTCCTGGCGGCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCEESRS*SWRPSL
Trigger: CAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCTC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCACCCATCCTCCTGCTaGAGAACCAGGACCACGTCC +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRHPSSC*RTRTTS
Trigger: GGACGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCTGGCCCCCTCGAGCTTaGCTGGGGGTGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCWPPRA*LGVPLW
Trigger: CCAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCA...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCAGTCCAGGTGGAGTTaGCCCCTGGGTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLQSRWS*PLGAVG
Trigger: CCCCACTGCACCCAGGGGGCAACTCCACCTGGACTG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCAGTCCAGGTGGAGTTaGCCCCTGGGTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAQSRWS*PLGAVG
Trigger: CCCCACTGCACCCAGGGGGCAACTCCACCTGGACTG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCTCGTCATCAGACTCCTaGCTGGTGTTCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRSSSDS*LVFRPR
Trigger: GCGGGGCCTGAACACCAGCCAGGAGTCTGATGACGA...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGTGGCGTCCACCTTCTaGGTTCCCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLVASTF*VPSGLE
Trigger: CTCCAGCCCCGAGGGAACCCAGAAGGTGGACGCCAC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACCACCTCTGGGAGCTaGCTCCAGGTGACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTATTSGS*LQVTWA
Trigger: CGCCCAGGTCACCTGGAGCCAGCTCCCAGAGGTGGT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTGGTGGTGCTCCATCTaGGTCACGGTCGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAWWCSI*VTVARS
Trigger: GCTGCGGGCGACCGTGACCCAGATGGAGCACCACCA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGATGTTGGAGAAGAGGTaGTGGTGCTCCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVMLEKR*WCSIWV
Trigger: GACCCAGATGGAGCACCACCACCTCTTCTCCAACAT...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCGGGTCACCCGCTGCATaGGGAGGATCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRGSPAA*GGSGRR
Trigger: TCTCCTTCCTGATCCTCCCCATGCAGCGGGTGACCC...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCCTCGCTCTTCTTCTTaGTCACAACCAGGACATCGT +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPPRSSS*SQPGHR
Trigger: ACGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTATCTTCTCCACCTaGATGTGGTTCATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PPAGPFSERGALLGTQGPSIFST*MWFIWA
Trigger: CGCCCAGATGAACCACATCCAGGTGGAGAAGATAGA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCGAAGCAGGGTCACCTaGAAGGGGTGGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTARSRVT*KGWGTE
Trigger: CTCCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGTTGGTGATCTCCACCTaGGGCAGGTCTCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLLVIST*GRSPLL
Trigger: CAGCAAAGGAGACCTGCCCCAGGTGGAGATCACCAA...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTGTGCTGCCGCCGGCTaGCCTCGCCAGGGCTACACG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQCAAAG*PRQGYT
Trigger: CGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLIGWAP*DTVWPP
Trigger: AGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTAT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGGTGGAGTTGCCCCCTaGGTGCAGTGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCGGVAP*VQWGGG
Trigger: CCCACCTCCCCACTGCACCCAGGGGGCAACTCCACC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGGTGGAGTTGCCCCCTaGGTGCAGTGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSGGVAP*VQWGGG
Trigger: CCCACCTCCCCACTGCACCCAGGGGGCAACTCCACC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCAGGACGATGGGCCATaGCTCCTCGTGCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSQDDGP*LLVPRG
Trigger: CCCCCGGGGCACGAGGAGCCATGGCCCATCGTCCTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCAGTGGCCCTGGGTCTTaGGGCAGAGCGTATCCATCA +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRSGPGS*GRAYPS
Trigger: TGATGGATACGCTCTGCCTCAAGACCCAGGGCCACT...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGCAACCAGGACATCGTTaGACAGGAAAAGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVQPGHR*TGKGST
Trigger: CGTGCTACCTTTTCCTGTTCAACGATGTCCTGGTTG...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGACCATGCTGGGTCCTTaGGACCAGCTCCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLTMLGP*DQLPTL
Trigger: GAGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCTCTCTGGGGACATGTaGTCTTCCTTCCGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLLSGDM*SSFREV
Trigger: CACTTCACGGAAGGAAGATCACATGTCCCCAGAGAG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAGCACCTGGGCCTTGTaGCGCTGCTCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCSTWAL*RCSRSS
Trigger: CGAGGACCTGGAGCAGCGGCACAAGGCCCAGGTGCT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGAAGTGCTTCTCAGCGTaGTCCTCCAGGATGTCACTG +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLKCFSA*SSRMSL
Trigger: CAGTGACATCCTGGAGGAGCACGCTGAGAAGCACTT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGTGGGCCCCCTCGTTaGACTGCCTCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLCGPPR*TASPAC
Trigger: GCAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACA...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGGCGGCCCTCGCTGTTaGGAAGCAGGGTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCGGPRC*EAGSPG
Trigger: TCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGCAGACGCTCCATCCTaGGGACATTGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLADAPS*GHCPPR
Trigger: CCGTGGAGGGCAATGTCCGCAGGATGGAGCGTCTGC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTGGCCCCCTCGAGCTTaGCTGGGGGTGCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQWPPRA*LGVPLW
Trigger: CCAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGAAACCGAAATCTCCCTaGCGGGTCCCCTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLKPKSP*RVPSLR
Trigger: CCGGAGGGAGGGGACCCGGCAGGGAGATTTCGGTTT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAGCCGGGGCAGGTGTTaGCCACGGCGATTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCSRGRC*PRRFCP
Trigger: AGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGTGGCGTCCACCTTCTaGGTTCCCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCVASTF*VPSGLE
Trigger: CTCCAGCCCCGAGGGAACCCAGAAGGTGGACGCCAC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGGGACATCCAGGATGTTaGAGAAGAGGTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLGHPGC*RRGGGA
Trigger: AGCACCACCACCTCTTCTCCAACATCCTGGATGTCC...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTCAGGAAGGAGAGCATaGGCAGGCCCCCGCACGCCG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQSGRRA*AGPRTP
Trigger: CGGCGTGCGGGGGCCTGCCCATGCTCTCCTTCCTGA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCCTTCAGTGCACGGCTaGCAGCCTTGTACCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRPSVHG*QPCTFR
Trigger: CCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCCAACGGGAATAGGCTaGGCTCCCTGGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAPTGIG*APWDTV
Trigger: CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCCAACGGGAATAGGCTaGGCTCCCTGGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLPTGIG*APWDTV
Trigger: CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGGTGGAGTTGCCCCCTaGGTGCAGTGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQGGVAP*VQWGGG
Trigger: CCCACCTCCCCACTGCACCCAGGGGGCAACTCCACC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCACCATGCTGGGTCCTTaGGACCAGCTCCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCTMLGP*DQLPTL
Trigger: GAGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGTTGGGTGCCCAGCTTaGGGGCCGCCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIVGCPA*GPPGSL
Trigger: CAGAGAGCCCGGCGGCCCTCAAGCTGGGCACCCAAC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCAAGGCTGCGCCTCCCTaGAACCCGCCAGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIKAAPP*NPPAES
Trigger: GGACTCAGCTGGCGGGTTGCAGGGAGGCGCAGCCTT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGGGATTGCAAAAGGCTaGGCCTCCCTGCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSGIAKG*ASLQPA
Trigger: GGCGGGTTGCAGGGAGGCGCAGCCTTTTGCAATCCC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR GCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCAGAGCTGGTCCAGGATaGCCAATTCCACCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRRAGPG*PIPPPL
Trigger: CAGAGGTGGTGGAATTGGGCATCCTGGACCAGCTCT...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAGCCGGGTCACCCGCTaGATGGGGAGGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCSRVTR*MGRIRK
Trigger: CTTCCTGATCCTCCCCATGCAGCGGGTGACCCGGCT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTGTGGGCCCCCTCGTTaGACTGCCTCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSCGPPR*TASPAC
Trigger: GCAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACA...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCTGTGGGCCCCCTCGTTaGACTGCCTCACCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCCGPPR*TASPAC
Trigger: GCAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACA...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACCACGTCCGCCTGCTaGAGTGTGACCTCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTATTSAC*SVTSSA
Trigger: AGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAGGACCACGTCCGCCTaGTGCAGTGTGACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTARTTSA*CSVTSS
Trigger: AGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCGGAGGCAGAGATCAGTaGGAGGGACTTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRGGRDQ*EGLDLA
Trigger: AGCAAGGTCAAGTCCCTCCCACTGATCTCTGCCTCC...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCGAAGCAGGGTCACCTaGAAGGGGTGGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSRSRVT*KGWGTE
Trigger: CTCCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCCCAGGGAACCATGCTaGGTCCTTGAGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAPREPC*VLETSS
Trigger: GGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCTGGGGGTGCCTCTCTaGGGACATGTGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRLGVPL*GHVIFL
Trigger: AAGGAAGATCACATGTCCCCAGAGAGGCACCCCCAG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCCTGGGACACGGTGTaGCCCCCTCGAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPWDTV*PPRACL
Trigger: CAGGCAAGCTCGAGGGGGCCACACCGTGTCCCAGGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGATAGGCTGGGCTCCCTaGGACACGGTGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQIGWAP*DTVWPP
Trigger: AGGGGGCCACACCGTGTCCCAGGGAGCCCAGCCTAT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAACGTGGGGCACTCCTaGGCACTCAGGGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTANVGHS*ALRALL
Trigger: AAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGAGCCGGAGCTCCGAGTaGAAGCGGTGTCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQSRSSE*KRCPRS
Trigger: GCTCCTGGGACACCGCTTCCACTCGGAGCTCCGGCT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTCCCCAGGCCCTTCATaGCCGCCCGGTAGGATTGGT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSSPGPS*PPGRIG
Trigger: ACCAATCCTACCGGGCGGCCATGAAGGGCCTGGGGA...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTCCTCGAAGAACCTCTaGCTGGCACCCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTASSKNL*LAPRTS
Trigger: GGATGTCCTGGGTGCCAGTCAGAGGTTCTTCGAGGA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCCTCCAGGATGTCACTaGTGTCCTCGACCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLPPGCH*CPRPAP
Trigger: AGGTGCTGGTCGAGGACATCAGTGACATCCTGGAGG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGAGTGGCCCTGGGTCTTaGGGCAGAGCGTATCCATCA +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLSGPGS*GRAYPS
Trigger: TGATGGATACGCTCTGCCTCAAGACCCAGGGCCACT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCCTCACCAGCTTGCTaGTGGCCTTCAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIASPAC*WPSVHG
Trigger: GCCGTGCACTGAAGGCCATCAGCAAGCTGGTGAGGC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCGAAGAAGGCCTTGGTaGTCTCCACCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSRRRPW*SPPGAG
Trigger: ACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCGCAGCTCCTTGGACTaGAGGAACTCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCRSSLD*RNSSTR
Trigger: CCTGGTGGAGGAGTTCCTGCAGTCCAAGGAGCTGCG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGCCCCCTCGTTGCACTaGCTCACCAGCTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCAPSLH*LTSLLM
Trigger: CATCAGCAAGCTGGTGAGGCAGTGCAACGAGGGGGC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGGCGGCCCTCGCTGTTaGGAAGCAGGGTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASGGPRC*EAGSPG
Trigger: TCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCATCCTGCGGACATTaGCCTCCACGGCCACACGGC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPSCGH*PPRPHG
Trigger: GCCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGCAGACGCTCCATCCTaGGGACATTGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQADAPS*GHCPPR
Trigger: CCGTGGAGGGCAATGTCCGCAGGATGGAGCGTCTGC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCAGACGCTCCATCCTaGGGACATTGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIADAPS*GHCPPR
Trigger: CCGTGGAGGGCAATGTCCGCAGGATGGAGCGTCTGC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASIGDRL*CRRLAS
Trigger: CGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAAT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGAATAATCGCTATTGGTaGCTCCTGTGCCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLNNRYW*LLCPSV
Trigger: GACTGATGGGCACAGGAGGCACCAATAGCGATTATT...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCGCCGGGCTCTCTGTaGTCAGGACGATGGGCCATG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPPGSL*SGRWAM
Trigger: CATGGCCCATCGTCCTGAGCACAGAGAGCCCGGCGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGTAACCTGTGGCCCTaGGGGATTGCAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGNLWP*GIAKGC
Trigger: GCAGCCTTTTGCAATCCCCCAGGGCCACAGGTTACC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCACCACCTCTGGGAGCTaGCTCCAGGTGACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASTTSGS*LQVTWA
Trigger: CGCCCAGGTCACCTGGAGCCAGCTCCCAGAGGTGGT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCATGTTGGAGAAGAGGTaGTGGTGCTCCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRMLEKR*WCSIWV
Trigger: GACCCAGATGGAGCACCACCACCTCTTCTCCAACAT...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCTTTCGGAGTGGCCCTaGGTCTTGAGGCAGAGCGTA +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLLSEWP*VLRQSV
Trigger: TACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCATGCGCTCCATCCTGTaGGCCCCCTCGTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSMRSIL*APSLHC
Trigger: GCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCAT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGATGCGCTCCATCCTGTaGGCCCCCTCGTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQMRSIL*APSLHC
Trigger: GCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCAT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCGAAGCAGGGTCACCTaGAAGGGGTGGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASRSRVT*KGWGTE
Trigger: CTCCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLTATGS*EAPGNH
Trigger: ATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGCCACAGGCTCTTaGGAAGCCCCAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTATATGS*EAPGNH
Trigger: ATGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCCCTGGGACACGGTGTaGCCCCCTCGAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIPWDTV*PPRACL
Trigger: CAGGCAAGCTCGAGGGGGCCACACCGTGTCCCAGGG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCGCCCATCAGTCCAGGTaGAGTTGCCCCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSAHQSR*SCPLGA
Trigger: TGCACCCAGGGGGCAACTCCACCTGGACTGATGGGC...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAACGTGGGGCACTCCTaGGCACTCAGGGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCNVGHS*ALRALL
Trigger: AAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCTGTGCTCAGGACGATaGGCCATGGCTCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIILCSGR*AMAPRA
Trigger: GGCACGAGGAGCCATGGCCCATCGTCCTGAGCACAG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCTGGATGGCATCTCCCTaGCCACCTGGCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIWMASP*PPGFPR
Trigger: CCTGGGGAAGCCAGGTGGCCAGGGAGATGCCATCCA...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCTCCTCGAAGAACCTCTaGCTGGCACCCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCSSKNL*LAPRTS
Trigger: GGATGTCCTGGGTGCCAGTCAGAGGTTCTTCGAGGA...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGCCTCACCAGCTTGCTaGTGGCCTTCAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASASPAC*WPSVHG
Trigger: GCCGTGCACTGAAGGCCATCAGCAAGCTGGTGAGGC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGTCTCTCACTGTGTGTaGGCGCCACGATCCACCGTG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIVSHCV*APRSTV
Trigger: CACGGTGGATCGTGGCGCTCACACACAGTGAGAGAC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCGCCTGCTGCAGTGTaGCCTCGTCTGCTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPPAAV*PRLLAS
Trigger: CGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCGTTTC*LETGCA
Trigger: AGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGTGATCTTCCTTCCGTaGAGTGTCTGGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSVIFLP*SVWSPA
Trigger: TGCCGGGCTCCAGACACTTCACGGAAGGAAGATCAC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCGCAGCTCCTTGGACTaGAGGAACTCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQRSSLD*RNSSTR
Trigger: CCTGGTGGAGGAGTTCCTGCAGTCCAAGGAGCTGCG...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGAGAAGAGGTGGTGGTaGTCCATCTGGGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSEKRWW*SIWVTV
Trigger: GACCGTGACCCAGATGGAGCACCACCACCTCTTCTC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTAGCACCTGGGCCTTGTaGCGCTGCTCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAISTWAL*RCSRSS
Trigger: CGAGGACCTGGAGCAGCGGCACAAGGCCCAGGTGCT...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTCAGCTTCTGCAGCGTaGGCTGTTGGTAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLSASAA*AVGRPR
Trigger: ACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGA...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGCCCCCTCGTTGCACTaGCTCACCAGCTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQAPSLH*LTSLLM
Trigger: CATCAGCAAGCTGGTGAGGCAGTGCAACGAGGGGGC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGACCACGTCCGCCTGCTaGAGTGTGACCTCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQTTSAC*SVTSSA
Trigger: AGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGAGGACCACGTCCGCCTaGTGCAGTGTGACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQRTTSA*CSVTSS
Trigger: AGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCACCCATCCTCCTGCTaGAGAACCAGGACCACGTCC +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSHPSSC*RTRTTS
Trigger: GGACGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCAGCCACCCATCCTCCTaGTGCAGAACCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIISHPSS*CRTRTT
Trigger: CGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTGGCT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCCACCCATCCTCCTaGTGCAGAACCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSSHPSS*CRTRTT
Trigger: CGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTGGCT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCAGCCCCAGGGAACCATaGTGGGTCCTTGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIISPREP*WVLETS
Trigger: GCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTATTGGTGCCTCCTGTaGCCATCAGTCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAYWCLL*PSVQVE
Trigger: CTCCACCTGGACTGATGGGCACAGGAGGCACCAATA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGGGTTCCCTCGGGGCTaGAGGACTCATCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIGFPRG*RTHRGC
Trigger: ACATCCTCGATGAGTCCTCCAGCCCCGAGGGAACCC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCAATTCCACCACCTCTaGGAGCTGGCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCQFHHL*ELAPGD
Trigger: GTCACCTGGAGCCAGCTCCCAGAGGTGGTGGAATTG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTTGGAGAAGAGGTGGTaGTGCTCCATCTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLLEKRW*CSIWVT
Trigger: CGTGACCCAGATGGAGCACCACCACCTCTTCTCCAA...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCTTTCGGAGTGGCCCTaGGTCTTGAGGCAGAGCGTA +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSLSEWP*VLRQSV
Trigger: TACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGCAGGTCTCCTTTGCTaGAGAGGCCCTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQAGLLC*RGPATV
Trigger: GACAGTGGCAGGGCCTCTCCAGCAAAGGAGACCTGC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCGACCACTTGCTGATTaGAGACAGGCTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCRPLAD*RQAVLP
Trigger: CGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCTGTCTGAGTGCCGCTaGGCCATGCTGGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILSECR*AMLGGC
Trigger: ACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGCCGGGACCTGGGGCTaGAAGGCGGCATCGTCTCTA +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIAGTWG*KAASSL
Trigger: TAGAGACGATGCCGCCTTCCAGCCCCAGGTCCCGGC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTAGGAGAACTCCGACGTaGGGATCTCGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSRRTPT*GSRTWP
Trigger: AGGCCATGTTCGAGATCCTCACGTCGGAGTTCTCCT...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCCGCCTGCTGCAGTGTaGCCTCGTCTGCTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIPPAAV*PRLLAS
Trigger: CGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGTGATCTTCCTTCCGTaGAGTGTCTGGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIVIFLP*SVWSPA
Trigger: TGCCGGGCTCCAGACACTTCACGGAAGGAAGATCAC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCTCCAAGGAGCTGTCTaGGTGCCGCTGGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILQGAV*VPLGHA
Trigger: AGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGCTGGGGGTCGTCCTTaGAGGAACCCTTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIAGGRP*RNPCAH
Trigger: GTGGGCACAAGGGTTCCTTCAAGGACGACCCCCAGC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAGAGCTGGTCCAGGATaGCCAATTCCACCACCTCTG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCRAGPG*PIPPPL
Trigger: CAGAGGTGGTGGAATTGGGCATCCTGGACCAGCTCT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTCGAACATGGCCTCCTaGCTTTTCCGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSSNMAS*LFRSSV
Trigger: CACTGAGGAGCGGAAAAGGCAGGAGGCCATGTTCGA...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAAGTGCTTCTCAGCGTaGTCCTCCAGGATGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAKCFSA*SSRMSL
Trigger: CAGTGACATCCTGGAGGAGCACGCTGAGAAGCACTT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTAGCCGGGTCACCCGCTaGATGGGGAGGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAISRVTR*MGRIRK
Trigger: CTTCCTGATCCTCCCCATGCAGCGGGTGACCCGGCT...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGCTGATGGCCTTCAGTaGACGGCTGGCAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQADGLQ*TAGSLV
Trigger: TACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAGC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGTGACCTCGTCTGCTTaGTTCGCGAAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSVTSSA*FAKKAL
Trigger: CAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCAC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCAGGACCACGTCCGCCTaGTGCAGTGTGACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASRTTSA*CSVTSS
Trigger: AGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTAAACCGAAATCTCCCTaGCGGGTCCCCTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIKPKSP*RVPSLR
Trigger: CCGGAGGGAGGGGACCCGGCAGGGAGATTTCGGTTT...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCTGGGGTCTTTGCCTTaGTGGCCACAGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASLGSLP*WPQPGS
Trigger: AGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR GCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCCTCTCGGCTCCACATaGGAAGCTGTGCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSPLGST*EAVPNR
Trigger: TCTATTGGGCACAGCTTCGCATGTGGAGCCGAGAGG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAAGGAGGGTAACCTGTaGCCCTGGGGGATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAKEGNL*PWGIAK
Trigger: TTTTGCAATCCCCCAGGGCCACAGGTTACCCTCCTT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTCCTCAGTGGAGAGCTaGTCCAGGATGCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSSSVES*SRMPNS
Trigger: GGAATTGGGCATCCTGGACCAGCTCTCCACTGAGGA...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGATGTTGGAGAAGAGGTaGTGGTGCTCCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLMLEKR*WCSIWV
Trigger: GACCCAGATGGAGCACCACCACCTCTTCTCCAACAT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCGTTGGTAGACCTCGTTaGAGCAGTAGGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAVGRPR*SSRRCR
Trigger: CCTACATCGCCTACTGCTCCAACGAGGTCTACCAAC...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCCTTCAGTGCACGGCTaGCAGCCTTGTACCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIPSVHG*QPCTFR
Trigger: CCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGGAGGCAGAGATCAGTaGGAGGGACTTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSGGRDQ*EGLDLA
Trigger: AGCAAGGTCAAGTCCCTCCCACTGATCTCTGCCTCC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGGAGGCAGAGATCAGTaGGAGGGACTTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCGGRDQ*EGLDLA
Trigger: AGCAAGGTCAAGTCCCTCCCACTGATCTCTGCCTCC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCAGCACGTTGGCCGGCTaGCAATTTTTCGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLGSPREPCWVLETSSPRSTLAG*QFFEKV
Trigger: GACTTTTTCGAAAAATTGCCAGCCGGCCAACGTGCT...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCCAGGGAACCATGCTaGGTCCTTGAGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPREPC*VLETSS
Trigger: GGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCTGGGGGTGCCTCTCTaGGGACATGTGATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCLGVPL*GHVIFL
Trigger: AAGGAAGATCACATGTCCCCAGAGAGGCACCCCCAG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCCAACGGGAATAGGCTaGGCTCCCTGGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIPTGIG*APWDTV
Trigger: CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTAGCTTAGGGCTTAGCTaGATGGCATCTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSSLGLS*MASPWP
Trigger: TGGCCAGGGAGATGCCATCCAGCTAAGCCCTAAGCT...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGAGTATGAGGCTGGCTaGGTTCCTCAGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIEYEAG*VPQPEP
Trigger: AGGCTCTGGCTGAGGAACCCAGCCAGCCTCATACTC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
3UTR CAA 72 bp CTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LRGRKGIGGDLA*PPIIAIGASCA
Trigger: GGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGAGAACTCCGACGTaGGGATCTCGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSRRTPT*GSRTWP
Trigger: AGGCCATGTTCGAGATCCTCACGTCGGAGTTCTCCT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCTCCAGGATGTCACTaGTGTCCTCGACCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPPGCH*CPRPAP
Trigger: AGGTGCTGGTCGAGGACATCAGTGACATCCTGGAGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCAGTGGCCCTGGGTCTTaGGGCAGAGCGTATCCATCA +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASSGPGS*GRAYPS
Trigger: TGATGGATACGCTCTGCCTCAAGACCCAGGGCCACT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGTGATCTTCCTTCCGTaGAGTGTCTGGAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASVIFLP*SVWSPA
Trigger: TGCCGGGCTCCAGACACTTCACGGAAGGAAGATCAC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGAGAGCTGGTCCAGGATaGCCAATTCCACCACCTCTG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQRAGPG*PIPPPL
Trigger: CAGAGGTGGTGGAATTGGGCATCCTGGACCAGCTCT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCTCGAACATGGCCTCCTaGCTTTTCCGCTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSSNMAS*LFRSSV
Trigger: CACTGAGGAGCGGAAAAGGCAGGAGGCCATGTTCGA...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGAGAAGAGGTGGTGGTaGTCCATCTGGGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASEKRWW*SIWVTV
Trigger: GACCGTGACCCAGATGGAGCACCACCACCTCTTCTC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTGCAGCGTGTACATCTaGTCCATGCGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQCSVYI*SMRSIL
Trigger: CAGGATGGAGCGCATGGAGCAGATGTACACGCTGCA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCAAGTCCAGCTGTGTGTaGAGCGTGTACATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCKSSCV*SVYICS
Trigger: GGAGCAGATGTACACGCTGCACACACAGCTGGACTT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGTGACCTCGTCTGCTTaGTTCGCGAAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIVTSSA*FAKKAL
Trigger: CAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCAC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCAGTGTGACCTCGTCTaGTTGCTTCGCGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSQCDLV*LLREEG
Trigger: GCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTATTGGTGCCTCCTGTaGCCATCAGTCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQYWCLL*PSVQVE
Trigger: CTCCACCTGGACTGATGGGCACAGGAGGCACCAATA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGGTTCCCTCGGGGCTaGAGGACTCATCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIGFPRG*RTHRGC
Trigger: ACATCCTCGATGAGTCCTCCAGCCCCGAGGGAACCC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCAATTCCACCACCTCTaGGAGCTGGCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASQFHHL*ELAPGD
Trigger: GTCACCTGGAGCCAGCTCCCAGAGGTGGTGGAATTG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCTCCTCAGTGGAGAGCTaGTCCAGGATGCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSSSVES*SRMPNS
Trigger: GGAATTGGGCATCCTGGACCAGCTCTCCACTGAGGA...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCTTGGAGAAGAGGTGGTaGTGCTCCATCTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSLEKRW*CSIWVT
Trigger: CGTGACCCAGATGGAGCACCACCACCTCTTCTCCAA...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTGGACATCCAGGATGTTaGAGAAGAGGTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSGHPGC*RRGGGA
Trigger: AGCACCACCACCTCTTCTCCAACATCCTGGATGTCC...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGTTGGTAGACCTCGTTaGAGCAGTAGGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCVGRPR*SSRRCR
Trigger: CCTACATCGCCTACTGCTCCAACGAGGTCTACCAAC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCGAAAAGGTAGCACGTTaGCCGGCTGGCAATTTTTCG +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAEKVAR*PAGNFS
Trigger: CGAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTC...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTCTATCTTCTCCACCTaGATGTGGTTCATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLSIFST*MWFIWA
Trigger: CGCCCAGATGAACCACATCCAGGTGGAGAAGATAGA...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGTTGGTGATCTCCACCTaGGGCAGGTCTCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQLVIST*GRSPLL
Trigger: CAGCAAAGGAGACCTGCCCCAGGTGGAGATCACCAA...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCCCAATAATCGCTATTaGTGCCTCCTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAPNNRY*CLLCPS
Trigger: TGATGGGCACAGGAGGCACCAATAGCGATTATTGGG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTCCTCAGCCAGAGCCTaGAGCTTAGGGCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASSSARA*SLGLSW
Trigger: CCAGCTAAGCCCTAAGCTCCAGGCTCTGGCTGAGGA...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGCGTCTTCTTGTTTTTaGCCGGGCTCCGAGTATGAG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCASSCF*PGSEYE
Trigger: CTCATACTCGGAGCCCGGCCAAAAACAAGAAGACGC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR TCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCAACCAGGACATCGTTaGACAGGAAAAGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSQPGHR*TGKGST
Trigger: CGTGCTACCTTTTCCTGTTCAACGATGTCCTGGTTG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCTCTCTGGGGACATGTaGTCTTCCTTCCGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQLSGDM*SSFREV
Trigger: CACTTCACGGAAGGAAGATCACATGTCCCCAGAGAG...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAAGTGCTTCTCAGCGTaGTCCTCCAGGATGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSKCFSA*SSRMSL
Trigger: CAGTGACATCCTGGAGGAGCACGCTGAGAAGCACTT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGCAGCGTGTACATCTaGTCCATGCGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASCSVYI*SMRSIL
Trigger: CAGGATGGAGCGCATGGAGCAGATGTACACGCTGCA...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAAGTCCAGCTGTGTGTaGAGCGTGTACATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSKSSCV*SVYICS
Trigger: GGAGCAGATGTACACGCTGCACACACAGCTGGACTT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGTGACCTCGTCTGCTTaGTTCGCGAAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASVTSSA*FAKKAL
Trigger: CAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCAC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGAATAATCGCTATTGGTaGCTCCTGTGCCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLNNRYW*LLCPSV
Trigger: GACTGATGGGCACAGGAGGCACCAATAGCGATTATT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCAATTCCACCACCTCTaGGAGCTGGCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIQFHHL*ELAPGD
Trigger: GTCACCTGGAGCCAGCTCCCAGAGGTGGTGGAATTG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTCCTCAGTGGAGAGCTaGTCCAGGATGCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASSSVES*SRMPNS
Trigger: GGAATTGGGCATCCTGGACCAGCTCTCCACTGAGGA...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTTTTCCGCTCCTCAGTaGAGAGCTGGTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASFSAPQ*RAGPGC
Trigger: GCATCCTGGACCAGCTCTCCACTGAGGAGCGGAAAA...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGTTGGTAGACCTCGTTaGAGCAGTAGGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIVGRPR*SSRRCR
Trigger: CCTACATCGCCTACTGCTCCAACGAGGTCTACCAAC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAGCACGTTGGCCGGCTaGCAATTTTTCGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTASTLAG*QFFEKV
Trigger: GACTTTTTCGAAAAATTGCCAGCCGGCCAACGTGCT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGAAAAGGTAGCACGTTaGCCGGCTGGCAATTTTTCG +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCEKVAR*PAGNFS
Trigger: CGAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCCTCGCTCTTCTTCTTaGTCACAACCAGGACATCGT +
Preference number: 4 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCPRSSS*SQPGHR
Trigger: ACGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCCTCGCTCTTCTTCTTaGTCACAACCAGGACATCGT +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSPRSSS*SQPGHR
Trigger: ACGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCCCAATAATCGCTATTaGTGCCTCCTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSPNNRY*CLLCPS
Trigger: TGATGGGCACAGGAGGCACCAATAGCGATTATTGGG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR TCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCAACCAGGACATCGTTaGACAGGAAAAGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSQPGHR*TGKGST
Trigger: CGTGCTACCTTTTCCTGTTCAACGATGTCCTGGTTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCCAAGACCTCTCCTATaGCACAAGTCCCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: DLALPPIIAIGASCAHQSPRPLL*HKSHLK
Trigger: TTTCAGGTGGGACTTGTGGCATAGGAGAGGTCTTGG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTCAGCTTCTGCAGCGTaGGCTGTTGGTAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAISASAA*AVGRPR
Trigger: ACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTGCAGCGTGTACATCTaGTCCATGCGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAICSVYI*SMRSIL
Trigger: CAGGATGGAGCGCATGGAGCAGATGTACACGCTGCA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCAGTGTGACCTCGTCTaGTTGCTTCGCGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIQCDLV*LLREEG
Trigger: GCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTATTGGTGCCTCCTGTaGCCATCAGTCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIYWCLL*PSVQVE
Trigger: CTCCACCTGGACTGATGGGCACAGGAGGCACCAATA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCCACATGCGAAGCTGTaGCCAATAGATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASPHAKL*PIDVSS
Trigger: GGAGCTGACATCTATTGGGCACAGCTTCGCATGTGG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTTTTCCGCTCCTCAGTaGAGAGCTGGTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIFSAPQ*RAGPGC
Trigger: GCATCCTGGACCAGCTCTCCACTGAGGAGCGGAAAA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTTGGAGAAGAGGTGGTaGTGCTCCATCTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILEKRW*CSIWVT
Trigger: CGTGACCCAGATGGAGCACCACCACCTCTTCTCCAA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGAAAAGGTAGCACGTTaGCCGGCTGGCAATTTTTCG +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIEKVAR*PAGNFS
Trigger: CGAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCCCCAATAATCGCTATTaGTGCCTCCTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIPNNRY*CLLCPS
Trigger: TGATGGGCACAGGAGGCACCAATAGCGATTATTGGG...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGACATCCAGGATGTTaGAGAAGAGGTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIGHPGC*RRGGGA
Trigger: AGCACCACCACCTCTTCTCCAACATCCTGGATGTCC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCTCCCCAGCGTCTTCTaGACAAAAGAGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILPSVF*TKERHR
Trigger: TCTGTGTCTCTCTTTTGTGCAGAAGACGCTGGGGAG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS-3UTR CCA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCAGCACGTTGGCCGGCTaGCAATTTTTCGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: KGIGGDLALPPIIAIGASSTLAG*QFFEKV
Trigger: GACTTTTTCGAAAAATTGCCAGCCGGCCAACGTGCT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR GCA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTAATAATCGCTATTGGTaGCTCCTGTGCCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: RGRKGIGGDLALPPIIAINNRYW*LLCPSV
Trigger: GACTGATGGGCACAGGAGGCACCAATAGCGATTATT...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp GCTTCCAGCGCCGGGTCCTGTCCTGTCCTGCAGCCGCTTCGCTCCTaGGGCAGCGCGGTCCGGCCCGGGGCGCCTCCTCCGCTTCCTGCG +
Preference number: 5 (lower is better)
Translates to: ASSAGSCPVLQPLRS*GSAVRPGAPPPLPA
Trigger: CGCAGGAAGCGGAGGAGGCGCCCCGGGCCGGACCGCGCTGCCGCAGGAGCGAAGCGGCTGCAGGACAGGACAGGACCCGGCGCTGGAAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp GGGCAGTCGGTGGGACGGTCCCACCCAGCTCCTACCCAGTGCTGCTaGGCTCCCGTCCAGGTCCCACCCGGCTCCCCTGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GQSVGRSHPAPTQCC*APVQVPPGSPAVVG
Trigger: CCCCACCACTGCAGGGGAGCCGGGTGGGACCTGGACGGGAGCCCAGCAGCACTGGGTAGGAGCTGGGTGGGACCGTCCCACCGACTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS GCA 90 bp CACGGGCAGTCGGTGGGACGGTCCCACCCAGCTCCTACCCAGTGCTaGTGGGCTCCCGTCCAGGTCCCACCCGGCTCCCCTGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: HGQSVGRSHPAPTQC*WAPVQVPPGSPAVV
Trigger: CACCACTGCAGGGGAGCCGGGTGGGACCTGGACGGGAGCCCAGCAGCACTGGGTAGGAGCTGGGTGGGACCGTCCCACCGACTGCCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp CGGTGTCCCAGGAGCTTCTCCTCCAAGGAGCTGTCTGAGTGCCGCTaGGCCATGCTGGGCGGCTGTGGGGTCCTGCGCCGCGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RCPRSFSSKELSECR*AMLGGCGVLRRGAE
Trigger: CTCCGCCCCGCGGCGCAGGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAGGAGAAGCTCCTGGGACACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp TACCCAGTGCTGCTGGGCTCCCGTCCAGGTCCCACCCGGCTCCCCTaGAGTGGTGGGGAGGCAGCCACGGACGGGCTCCAAGAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: YPVLLGSRPGPTRLP*SGGEAATDGLQEFP
Trigger: CGGGAACTCTTGGAGCCCGTCCGTGGCTGCCTCCCCACCACTGCAGGGGAGCCGGGTGGGACCTGGACGGGAGCCCAGCAGCACTGGGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS GCA 90 bp AGACACGGGCAGTCGGTGGGACGGTCCCACCCAGCTCCTACCCAGTaGTGCTGGGCTCCCGTCCAGGTCCCACCCGGCTCCCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: RHGQSVGRSHPAPTQ*CWAPVQVPPGSPAV
Trigger: CACTGCAGGGGAGCCGGGTGGGACCTGGACGGGAGCCCAGCAGCACTGGGTAGGAGCTGGGTGGGACCGTCCCACCGACTGCCCGTGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp TCCCGCCGGGCGGCCTCCCTGCTAAGTACAGCCGCCCCGAAGCTCTaGTGGCGGGCTGGGGTCTTTGCCTTGCTGGCCACAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SRRAASLLSTAAPKL*WRAGVFALLATARL
Trigger: GAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGCAGGGAGGCCGCCCGGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp TGGAAGCGGTGTCCCAGGAGCTTCTCCTCCAAGGAGCTGTCTGAGTaGCGCTGGGCCATGCTGGGCGGCTGTGGGGTCCTGCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: WKRCPRSFSSKELSE*RWAMLGGCGVLRRG
Trigger: CCCGCGGCGCAGGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAGGAGAAGCTCCTGGGACACCGCTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp GGCAGAGCGTATCCATCAGGAGGGGCAGCCGGGTCACCCGCTGCATaGGGAGGATCAGGAAGGAGAGCATGGGCAGGCCCCCGCACGCCG +
Preference number: 5 (lower is better)
Translates to: GRAYPSGGAAGSPAA*GGSGRRAWAGPRTP
Trigger: CGGCGTGCGGGGGCCTGCCCATGCTCTCCTTCCTGATCCTCCCCATGCAGCGGGTGACCCGGCTGCCCCTCCTGATGGATACGCTCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS CCA 90 bp CGTGCCCGGTCACTCGCGGAGTCCGAGGAGAGCAGGAGCTGCTCCTaGCGGCCCTCGCTGTTGCGAAGCAGGGTCACCTGGAAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RARSLAESEESRSCS*RPSLLRSRVTWKGW
Trigger: CCACCCCTTCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCTCGGACTCCGCGAGTGACCGGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGCACGGCTGGCAGCCTaGTACCTTTCGGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPARLAA*YLSEWP
Trigger: GGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS TCA 90 bp CGAGTGGAAGCGGTGTCCCAGGAGCTTCTCCTCCAAGGAGCTGTCTaGGTGCCGCTGGGCCATGCTGGGCGGCTGTGGGGTCCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: RVEAVSQELLLQGAV*VPLGHAGRLWGPAP
Trigger: CGGCGCAGGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAGGAGAAGCTCCTGGGACACCGCTTCCACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp CGGAGTCCGAGGAGAGCAGGAGCTGCTCCTGGCGGCCCTCGCTGTTaGGAAGCAGGGTCACCTGGAAGGGGTGGGGCACGGAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: RSPRRAGAAPGGPRC*EAGSPGRGGARRSY
Trigger: GTAGCTCCTCCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCTCGGACTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 90 bp ACCCGCCAGCTGAGTCCTCTAGGCCCACAGGCTCTCACGGCTGTGTaGGAGAGGGAGGCTTTGGGAGGGGACTGCCCCAGGCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: TRQLSPLGPQALTAV*EREALGGDCPRLGT
Trigger: GGTGCCCAGCCTGGGGCAGTCCCCTCCCAAAGCCTCCCTCTCCCACACAGCCGTGAGAGCCTGTGGGCCTAGAGGACTCAGCTGGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS CCA 90 bp CGCCGGGCGGCCTCCCTGCTAAGTACAGCCGCCCCGAAGCTCTGGTaGCGGGCTGGGGTCTTTGCCTTGCTGGCCACAGCCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: RRAASLLSTAAPKLW*RAGVFALLATARLL
Trigger: TAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGCAGGGAGGCCGCCCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp GCGAGCGCCACCTGCCCCCGAGTGTCACGTAGAGCATGTGCCGAGTaGAAGCCGCGCCTCGGCTCTGAGGTCAGAGGGGCTCAGGGCCAA +
Preference number: 5 (lower is better)
Translates to: ASATCPRVSRRACAE*KPRLGSEVRGAQGQ
Trigger: TTGGCCCTGAGCCCCTCTGACCTCAGAGCCGAGGCGCGGCTTCCACTCGGCACATGCTCTACGTGACACTCGGGGGCAGGTGGCGCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPHSHRL*GSPREP
Trigger: TGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS TCA 90 bp GAGACCAGCTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTaGTTGGAGACAGGCTGTGCTGCCGCCGGCTGGCCTCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: ETSSPRSLEPGTTTC*LETGCAAAGWPRQG
Trigger: GCCCTGGCGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAGCTGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp CCCAGGTCTGCAGAGGAGGTCAGAGGCTGCACAGCGAGCGCCACCTaGCCCCGAGTGTCACGTAGAGCATGTGCCGAGTGGAAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: PRSAEEVRGCTASAT*PRVSRRACAEWKPR
Trigger: GCGCGGCTTCCACTCGGCACATGCTCTACGTGACACTCGGGGGCAGGTGGCGCTCGCTGTGCAGCCTCTGACCTCCTCTGCAGACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp CCTGGACCATGTAGCTCTCCTCGCTGTGGAGACACGGGCAGTCGGTaGGACGGTCCCACCCAGCTCCTACCCAGTGCTGCTGGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PGPCSSPRCGDTGSR*DGPTQLLPSAAGLP
Trigger: CGGGAGCCCAGCAGCACTGGGTAGGAGCTGGGTGGGACCGTCCCACCGACTGCCCGTGTCTCCACAGCGAGGAGAGCTACATGGTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTGAGTGGCCCTGGGTCTaGAGGCAGAGCGTATCCATC +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPEWPWV*RQSVSI
Trigger: GATGGATACGCTCTGCCTCAAGACCCAGGGCCACTC...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGTCCATCCTGCGGACATaGCCCTCCACGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLSILRT*PSTATR
Trigger: CCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGGA...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTCTCCCCAGCGTCTTCTaGTTTTTGGCCGGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPLPSVF*FLAGLR
Trigger: TCGGAGCCCGGCCAAAAACAAGAAGACGCTGGGGAG...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp TCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTaGCGCCGGCTGGCCTCGCCAGGGCTACACGTCCGTCTCCACCCG +
Preference number: 5 (lower is better)
Translates to: SRARHDHLLIGDRLC*RRLASPGLHVRLHP
Trigger: CGGGTGGAGACGGACGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp TGGCTTTCGAGTCCTCCTCGTGGCTATCACCGGCAGACCCAGGTCTaGAGAGGAGGTCAGAGGCTGCACAGCGAGCGCCACCTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: WLSSPPRGYHRQTQV*RGGQRLHSERHLPP
Trigger: CGGGGGCAGGTGGCGCTCGCTGTGCAGCCTCTGACCTCCTCTGCAGACCTGGGTCTGCCGGTGATAGCCACGAGGAGGACTCGAAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp GGGGTCCTTGTCCACGTCCATGTCATCCAGGGAGAAGCTGGGGGCTaGGAGGAGCTTAGGGTCCCGCCGGGCGGCCTCCCTGCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: GVLVHVHVIQGEAGG*EELRVPPGGLPAKY
Trigger: GTACTTAGCAGGGAGGCCGCCCGGCGGGACCCTAAGCTCCTCCCAGCCCCCAGCTTCTCCCTGGATGACATGGACGTGGACAAGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTCGGAAGGCGGCGTaGCTGCTTATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPSRKAA*LLISFC
Trigger: GCAGAAGCTGATAAGCAGCAACGCCGCCTTCCGAGA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGACGGAGGAGCTACGGTaGCCGCCCCCGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLTEELR*PPPGRG
Trigger: CCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCGT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCACAGCCACAGGCTCTaGGGAAGCCCCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLHSHRL*GSPREP
Trigger: TGGTTCCCTGGGGCTTCCCAAGAGCCTGTGGCTGTG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCCTTGAAGGAACCCTaGTGCCCACGTTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPSLKEP*CPRFLP
Trigger: GGGGAGGAAACGTGGGCACAAGGGTTCCTTCAAGGA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp AGGGTAACCTGTGGCCCTGGGGGATTGCAAAAGGCTGCGCCTCCCTaGAACCCGCCAGCTGAGTCCTCTAGGCCCACAGGCTCTCACGGC +
Preference number: 5 (lower is better)
Translates to: RVTCGPGGLQKAAPP*NPPAESSRPTGSHG
Trigger: GCCGTGAGAGCCTGTGGGCCTAGAGGACTCAGCTGGCGGGTTGCAGGGAGGCGCAGCCTTTTGCAATCCCCCAGGGCCACAGGTTACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS GCA 90 bp CTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCGCCAGGGCTACACGTCCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSRARHDHLLIGDRL*CRRLASPGLHVRLH
Trigger: GTGGAGACGGACGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp GAAACCGCAGCTGTCAGCCGGGGCAGGTGTTGCCCACGGCGATTCTaGCCTGGGACCCCAGAGACCTCTCGGCTCCACATGCGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: ETAAVSRGRCCPRRF*PGTPETSRLHMRSC
Trigger: ACAGCTTCGCATGTGGAGCCGAGAGGTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTGACAGCTGCGGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS CCA 90 bp GGCCTCCCTGCTAAGTACAGCCGCCCCGAAGCTCTGGTGGCGGGCTaGGGTCTTTGCCTTGCTGGCCACAGCCAGGCTCTTAGGGATCAG +
Preference number: 5 (lower is better)
Translates to: GLPAKYSRPEALVAG*GLCLAGHSQALRDQ
Trigger: CTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGCAGGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp CCTGTACCCTCCTGCCCCAGGGCCAGCGGTCCAGTGTCCATGGAGTaGGGCTCCCCACACCCTCCTGCCCTAAGGCCACCTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PVPSCPRASGPVSME*GSPHPPALRPPLLL
Trigger: AAGAAGAAGAGGTGGCCTTAGGGCAGGAGGGTGTGGGGAGCCCCACTCCATGGACACTGGACCGCTGGCCCTGGGGCAGGAGGGTACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGCTGCAGCGTGCGCTGTaGGTAGACCTCGTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLLQRAL*VDLVGA
Trigger: TGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAG...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCGCACGGCTGGCAGCCTaGTACCTTTCGGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LLGSPREPCWVLETSSPRARLAA*YLSEWP
Trigger: GGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGC...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCACGGAGGAGCTACGGTaGCCGCCCCCGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCTEELR*PPPGRG
Trigger: CCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCGT...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCCGGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTGTGACCTCGTCTGCTaGCTTCGCGAAGAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PPAGPFSERGALLGTQGPCDLVC*LREEGL
Trigger: AAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACA...AGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCTCCATCCTGCGGACATaGCCCTCCACGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: LLGSPREPCWVLETSSPRSILRT*PSTATR
Trigger: CCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGGA...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCGTGGCCCCCTCGAGCTaGCCTGGGGGTGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAVAPSS*PGGASL
Trigger: CAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCAC...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp TCATGGCCGCCCGGTAGGATTGGTTCCGCAGGTTCCGCCTCAGCATaGCCCCGGGGTCCTTGTCCACGTCCATGTCATCCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SWPPGRIGSAGSASA*PRGPCPRPCHPGRS
Trigger: GCTTCTCCCTGGATGACATGGACGTGGACAAGGACCCCGGGGGCATGCTGAGGCGGAACCTGCGGAACCAATCCTACCGGGCGGCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp GTGGCTATCACCGGCAGACCCAGGTCTGCAGAGGAGGTCAGAGGCTaGACAGCGAGCGCCACCTGCCCCCGAGTGTCACGTAGAGCATGT +
Preference number: 5 (lower is better)
Translates to: VAITGRPRSAEEVRG*TASATCPRVSRRAC
Trigger: ACATGCTCTACGTGACACTCGGGGGCAGGTGGCGCTCGCTGTGCAGCCTCTGACCTCCTCTGCAGACCTGGGTCTGCCGGTGATAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp GTCTTTGCCTTGCTGGCCACAGCCAGGCTCTTAGGGATCAGCTGTTaGGTGCCCAGCTTGAGGGCCGCCGGGCTCTCTGTGCTCAGGACG +
Preference number: 5 (lower is better)
Translates to: VFALLATARLLGISC*VPSLRAAGLSVLRT
Trigger: CGTCCTGAGCACAGAGAGCCCGGCGGCCCTCAAGCTGGGCACCCAACAGCTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CAA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGATCAGTGGGAGGGACTaGACCTTGCTGAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVISGRD*TLLKSS
Trigger: GCTGGACTTCAGCAAGGTCAAGTCCCTCCCACTGAT...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCTGGCGGCCCTCGCTGTaGCGAAGCAGGGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAWRPSL*RSRVTW
Trigger: CCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCA...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GCTGAGGGGCCCAGCCAGCCAACGGGAATAGGCTGGGCTCCCTGGGACACGGTGTGTGACCTCGTCTGCTaGCTTCGCGAAGAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: AEGPSQPTGIGWAPWDTVCDLVC*LREEGL
Trigger: AAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACA...CACCGTGTCCCAGGGAGCCCAGCCTATTCCCGTTGGCTGGCTGGGCCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGCGGGCTGGGGTCTTaGCCTTGCTGGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGGLGS*PCWPQP
Trigger: TGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS TCA 90 bp GTGGGCTGGCATCCCACACACACAGCCCATGCTGGTGAGCCTCTCTaGGCCCCTCTCTGCGTCCACAGAACAGGGAGAGTAGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VGWHPTHTAHAGEPL*APLCVHRTGRVGAR
Trigger: CCTGGCACCTACTCTCCCTGTTCTGTGGACGCAGAGAGGGGCTCAGAGAGGCTCACCAGCATGGGCTGTGTGTGTGGGATGCCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS TCA 90 bp CCTCTGCCCTGTGGGCTGGCATCCCACACACACAGCCCATGCTGGTaGGCCTCTCTGAGCCCCTCTCTGCGTCCACAGAACAGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: PLPCGLASHTHSPCW*ASLSPSLRPQNRES
Trigger: ACTCTCCCTGTTCTGTGGACGCAGAGAGGGGCTCAGAGAGGCTCACCAGCATGGGCTGTGTGTGTGGGATGCCAGCCCACAGGGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 90 bp GCTAAGTACAGCCGCCCCGAAGCTCTGGTGGCGGGCTGGGGTCTTTaGCTTGCTGGCCACAGCCAGGCTCTTAGGGATCAGCTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: AKYSRPEALVAGWGL*LAGHSQALRDQLLG
Trigger: ACCCAACAGCTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp CCCGCGTCCCACAGAACAGAGGCCATGGCTTTCGAGTCCTCCTCGTaGCTATCACCGGCAGACCCAGGTCTGCAGAGGAGGTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PASHRTEAMAFESSS*LSPADPGLQRRSEA
Trigger: AGCCTCTGACCTCCTCTGCAGACCTGGGTCTGCCGGTGATAGCCACGAGGAGGACTCGAAAGCCATGGCCTCTGTTCTGTGGGACGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp ACGGACGGGCTCCAAGAGTTCCCGCGTCCCACAGAACAGAGGCCATaGCTTTCGAGTCCTCCTCGTGGCTATCACCGGCAGACCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TDGLQEFPRPTEQRP*LSSPPRGYHRQTQV
Trigger: GACCTGGGTCTGCCGGTGATAGCCACGAGGAGGACTCGAAAGCCATGGCCTCTGTTCTGTGGGACGCGGGAACTCTTGGAGCCCGTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS-3UTR CAA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCCTGCAGCGTGCGCTGTaGGTAGACCTCGTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLGSPREPCWVLETSSPRLQRAL*VDLVGA
Trigger: TGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAG...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCACGGAGGAGCTACGGTaGCCGCCCCCGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASTEELR*PPPGRG
Trigger: CCCTCTGCCCGGGGGCGGCAACCGTAGCTCCTCCGT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GGCCGGCCCCTTCTCAGAACGTGGGGCACTCCTGGGCACTCAGGGCCCTTCTTGTGTGACCTCGTCTGCTaGCTTCGCGAAGAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: GRPLLRTWGTPGHSGPFLCDLVC*LREEGL
Trigger: AAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACA...CAAGAAGGGCCCTGAGTGCCCAGGAGTGCCCCACGTTCTGAGAAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp CTGCAGAACCAGGACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTaGTTGCTTCGCGAAGAAGGCCTTGGTGATCTCCACCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LQNQDHVRLLQCDLV*LLREEGLGDLHLGQ
Trigger: CTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp AGCCACCCATCCTCCTGCTGCAGAACCAGGACCACGTCCGCCTGCTaGAGTGTGACCTCGTCTGCTTGCTTCGCGAAGAAGGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SHPSSCCRTRTTSAC*SVTSSACFAKKALV
Trigger: CACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTGCAGCAGGAGGATGGGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp GGCCAGCGGTCCAGTGTCCATGGAGTGGGGCTCCCCACACCCTCCTaGCCTAAGGCCACCTCTTCTTCTTGGTCACAACCAGGACATCGT +
Preference number: 5 (lower is better)
Translates to: GQRSSVHGVGLPTPS*PKATSSSWSQPGHR
Trigger: ACGATGTCCTGGTTGTGACCAAGAAGAAGAGGTGGCCTTAGGGCAGGAGGGTGTGGGGAGCCCCACTCCATGGACACTGGACCGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 90 bp CTGATGGCCTTCAGTGCACGGCTGGCAGCCTTGTACCTTTCGGAGTaGCCCTGGGTCTTGAGGCAGAGCGTATCCATCAGGAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LMAFSARLAALYLSE*PWVLRQSVSIRRGS
Trigger: GCTGCCCCTCCTGATGGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS-3UTR CAA 90 bp CTCTTGGGAAGCCCCAGGGAACCATGCTGGGTCCTTGAGACCAGCTCCCCACGCTCTCGGAAGGCGGCGTaGCTGCTTATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLGSPREPCWVLETSSPRSRKAA*LLISFC
Trigger: GCAGAAGCTGATAAGCAGCAACGCCGCCTTCCGAGA...GCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTTCCCTGGGGCTTCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCCTGTGGGCCCCCTCGTaGCACTGCCTCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCLWAPS*HCLTSL
Trigger: CAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACAG...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTCTGTGGGCCCCCTCGTaGCACTGCCTCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSLWAPS*HCLTSL
Trigger: CAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACAG...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCTGGCGGCCCTCGCTGTaGCGAAGCAGGGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIWRPSL*RSRVTW
Trigger: CCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCA...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGTGGCCCCCTCGAGCTaGCCTGGGGGTGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASVAPSS*PGGASL
Trigger: CAGAGAGGCACCCCCAGGCAAGCTCGAGGGGGCCAC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGGGAGCCACGGACCATaGGGAGCCCGGAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASGSHGP*GARRLG
Trigger: ACCCAGCCTCCGGGCTCCCAATGGTCCGTGGCTCCC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGCTGGGGTCTTTGCCTaGCTGGCCACAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCAGVFA*LATARL
Trigger: GAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCAGCCGGGGCAGGTGTaGCCCACGGCGATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASQPGQV*PTAILP
Trigger: GGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS GCA 90 bp AGAACCAGGACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTGCTTaGTTCGCGAAGAAGGCCTTGGTGATCTCCACCTGGGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RTRTTSACCSVTSSA*FAKKALVISTWGRS
Trigger: AGACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 90 bp AGCTGTGTGTGCAGCGTGTACATCTGCTCCATGCGCTCCATCCTGTaGGCCCCCTCGTTGCACTGCCTCACCAGCTTGCTGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SCVCSVYICSMRSIL*APSLHCLTSLLMAF
Trigger: GAAGGCCATCAGCAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCATGGAGCAGATGTACACGCTGCACACACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCTGCAGCGTGCGCTGTaGGTAGACCTCGTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLLQRAL*VDLVGA
Trigger: TGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCTGTGGGCCCCCTCGTaGCACTGCCTCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: DLALPPIIAIGASCAHQSLWAPS*HCLTSL
Trigger: CAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACAG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGCCAGGCACGACCACTaGCTGATTGGAGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLARHDH*LIGDRL
Trigger: CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAACCATGCTGGGTCCTaGAGACCAGCTCCCCACGCT +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTANHAGS*RPAPHA
Trigger: AGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGAACCATGCTGGGTCCTaGAGACCAGCTCCCCACGCT +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLNHAGS*RPAPHA
Trigger: AGCGTGGGGAGCTGGTCTCAAGGACCCAGCATGGTT...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCACTCAGGGCCCTTCTaGTCCCACTCAGGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAHSGPF*SHSGVG
Trigger: TCCTACCCCTGAGTGGGACAAGAAGGGCCCTGAGTG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGGCCGCCCGGTAGGATaGGTTCCGCAGGTTCCGCCT +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASGRPVG*VPQVPP
Trigger: AGGCGGAACCTGCGGAACCAATCCTACCGGGCGGCC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAGCTGGGGGTCGTCCTaGAAGGAACCCTTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTASWGSS*KEPLCP
Trigger: TGGGCACAAGGGTTCCTTCAAGGACGACCCCCAGCT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS TCA 90 bp CGTTTCCTCCCCAGCGTCTTCTTGTTTTTGGCCGGGCTCCGAGTATaGGGCTGGCTGGGTTCCTCAGCCAGAGCCTGGAGCTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: RFLPSVFLFLAGLRV*GWLGSSARAWSLGL
Trigger: AAGCCCTAAGCTCCAGGCTCTGGCTGAGGAACCCAGCCAGCCTCATACTCGGAGCCCGGCCAAAAACAAGAAGACGCTGGGGAGGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 90 bp GACTTGACCTTGCTGAAGTCCAGCTGTGTGTGCAGCGTGTACATCTaGTCCATGCGCTCCATCCTGTGGGCCCCCTCGTTGCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: DLTLLKSSCVCSVYI*SMRSILWAPSLHCL
Trigger: GAGGCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCATGGAGCAGATGTACACGCTGCACACACAGCTGGACTTCAGCAAGGTCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 90 bp GAGATCAGTGGGAGGGACTTGACCTTGCTGAAGTCCAGCTGTGTGTaGAGCGTGTACATCTGCTCCATGCGCTCCATCCTGTGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: EISGRDLTLLKSSCV*SVYICSMRSILWAP
Trigger: GGGGGCCCACAGGATGGAGCGCATGGAGCAGATGTACACGCTGCACACACAGCTGGACTTCAGCAAGGTCAAGTCCCTCCCACTGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGCACTGCCTCACCAGCTaGCTGATGGCCTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLHCLTS*LMAFSA
Trigger: TGCACTGAAGGCCATCAGCAAGCTGGTGAGGCAGTG...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCCACTGCCTCACCAGCTaGCTGATGGCCTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAHCLTS*LMAFSA
Trigger: TGCACTGAAGGCCATCAGCAAGCTGGTGAGGCAGTG...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTGGCGGCCCTCGCTGTaGCGAAGCAGGGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIWRPSL*RSRVTW
Trigger: CCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGCCAGGCACGACCACTaGCTGATTGGAGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCARHDH*LIGDRL
Trigger: CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCATGCCCCCGGGGTCCTaGTCCACGTCCATGTCATCC +
Preference number: 5 (lower is better)
Translates to: DLALPPIIAIGASCAHQSMPPGS*STSMSS
Trigger: GGATGACATGGACGTGGACAAGGACCCCGGGGGCAT...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 90 bp CTGCACATCCCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTTGGCTTaGGCAACCCTGCCATGTGTAGCCTCAGGAAGCTTAGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: LHIPGAPRSLRFCLA*ATLPCVASGSLAQS
Trigger: GGACTGAGCTAAGCTTCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGGGATGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCAGGACATCCAGGATGTaGGAGAAGAGGTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTARTSRM*EKRWWC
Trigger: GCACCACCACCTCTTCTCCAACATCCTGGATGTCCT...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGGAGTGGCCCTGGGTCTaGAGGCAGAGCGTATCCATC +
Preference number: 5 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQEWPWV*RQSVSI
Trigger: GATGGATACGCTCTGCCTCAAGACCCAGGGCCACTC...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCGGGAGGGACTTGACCTaGCTGAAGTCCAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCGRDLT*LKSSCV
Trigger: CACACAGCTGGACTTCAGCAAGGTCAAGTCCCTCCC...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGCACTCAGGGCCCTTCTaGTCCCACTCAGGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQHSGPF*SHSGVG
Trigger: TCCTACCCCTGAGTGGGACAAGAAGGGCCCTGAGTG...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCAGCTGGGGGTCGTCCTaGAAGGAACCCTTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIISWGSS*KEPLCP
Trigger: TGGGCACAAGGGTTCCTTCAAGGACGACCCCCAGCT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCTCTCGGAAGGCGGCGTaGCTGCTTATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIISRKAA*LLISFC
Trigger: GCAGAAGCTGATAAGCAGCAACGCCGCCTTCCGAGA...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCCACTGCCTCACCAGCTaGCTGATGGCCTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: DLALPPIIAIGASCAHQSHCLTS*LMAFSA
Trigger: TGCACTGAAGGCCATCAGCAAGCTGGTGAGGCAGTG...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTCCCCACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGGGAAAAGGTAGCACGTaGGCCGGCTGGCAATTTTTC +
Preference number: 5 (lower is better)
Translates to: LPTLSRARHDHLLIGDRLGKGST*AGWQFF
Trigger: GAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTCC...CAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGTGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CTGGGGACATGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATT +
Preference number: 5 (lower is better)
Translates to: LGTCDLPSVKCLEPGTTAGGDLA*PPIIAI
Trigger: AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCC...GGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACATGTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCCACTCAGGGCCCTTCTaGTCCCACTCAGGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASHSGPF*SHSGVG
Trigger: TCCTACCCCTGAGTGGGACAAGAAGGGCCCTGAGTG...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp ACATGTGTGCGTGTGTGTGTACACCTTTCACCCTCATATACCCTCTaGCCTGTGGGCTGGCATCCCACACACACAGCCCATGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: TCVRVCVHLSPSYTL*PVGWHPTHTAHAGE
Trigger: CTCACCAGCATGGGCTGTGTGTGTGGGATGCCAGCCCACAGGGCAGAGGGTATATGAGGGTGAAAGGTGTACACACACACGCACACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CCA 90 bp TGCTGCTTATCAGCTTCTGCAGCGTGCGCTGTTGGTAGACCTCGTTaGAGCAGTAGGCGATGTAGGGGTGGAAGTGCTTCTCAGCGTGCT +
Preference number: 5 (lower is better)
Translates to: CCLSASAACAVGRPR*SSRRCRGGSASQRA
Trigger: AGCACGCTGAGAAGCACTTCCACCCCTACATCGCCTACTGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGATAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000445297.5
ENST00000464620.1
ENST00000485984.1
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCAGGACATCCAGGATGTaGGAGAAGAGGTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIRTSRM*EKRWWC
Trigger: GCACCACCACCTCTTCTCCAACATCCTGGATGTCCT...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCGGGAGGGACTTGACCTaGCTGAAGTCCAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASGRDLT*LKSSCV
Trigger: CACACAGCTGGACTTCAGCAAGGTCAAGTCCCTCCC...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCAGATCAGTGGGAGGGACTaGACCTTGCTGAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRIAPNNRYWCLLCPSVQISGRD*TLLKSS
Trigger: GCTGGACTTCAGCAAGGTCAAGTCCCTCCCACTGAT...CTGGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp ACGCTCTCTAGAGCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTGCTCCTCGCTCTTCTTCTaGGTCACAACCAGGACATCG +
Preference number: 5 (lower is better)
Translates to: TLSRARHDHLLIGDRLCCSSLFF*VTTRTS
Trigger: CGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGGA...GCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGCTCTAGAGAGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp TGTGATCTTCCTTCCGTGAAGTGTCTGGAGCCCGGCACCACAGCCACAGGCTCTTCCTCGCTCTTCTTCTaGGTCACAACCAGGACATCG +
Preference number: 5 (lower is better)
Translates to: CDLPSVKCLEPGTTATGSSSLFF*VTTRTS
Trigger: CGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGGA...AGAGCCTGTGGCTGTGGTGCCGGGCTCCAGACACTTCACGGAAGGAAGATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTCTTAGGGATCAGCTGTaGGGTGCCCAGCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RGRKGIGGDLALPPIIAILRDQL*GAQLEG
Trigger: GCCCTCAAGCTGGGCACCCAACAGCTGATCCCTAAG...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS TCA 90 bp TCCTGCCATGTGCGGGGCTGTGTGTATGGGCAGCATGCACATGTGTaGATATGCCTGTGCACCATGTGCATGCATGTGTGTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: SCHVRGCVYGQHAHV*ICLCTMCMHVCAST
Trigger: CGTGGATGCACACACATGCATGCACATGGTGCACAGGCATATTCACACATGTGCATGCTGCCCATACACACAGCCCCGCACATGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS-3UTR CAA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGGAGGGACTTGACCTaGCTGAAGTCCAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RGRKGIGGDLALPPIIAIGRDLT*LKSSCV
Trigger: CACACAGCTGGACTTCAGCAAGGTCAAGTCCCTCCC...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCATCAGTGGGAGGGACTaGACCTTGCTGAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KGIGGDLALPPIIAIGASISGRD*TLLKSS
Trigger: GCTGGACTTCAGCAAGGTCAAGTCCCTCCCACTGAT...GGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGGAAAAGGTAGCACGTaGGCCGGCTGGCAATTTTTC +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIGKGST*AGWQFF
Trigger: GAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTCC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCGGAAAAGGTAGCACGTaGGCCGGCTGGCAATTTTTC +
Preference number: 5 (lower is better)
Translates to: DLALPPIIAIGASCAHQSGKGST*AGWQFF
Trigger: GAAAAATTGCCAGCCGGCCAACGTGCTACCTTTTCC...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCTCCTCGCTCTTCTTCTaGGTCACAACCAGGACATCG +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIISSLFF*VTTRTS
Trigger: CGATGTCCTGGTTGTGACCAAGAAGAAGAGCGAGGA...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp CCACTCAGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATT +
Preference number: 5 (lower is better)
Translates to: PLRGRKGIGGDLALPPIIGGDLA*PPIIAI
Trigger: AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCC...GATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp GACCTCGCATTGCCCCCAATAATCGCTATTGGTGCCTCCTGTGCCCATCAGTCCGGAGGAGACCTCGCATaGCCCCCAATAATCGCTATT +
Preference number: 5 (lower is better)
Translates to: DLALPPIIAIGASCAHQSGGDLA*PPIIAI
Trigger: AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCC...GGACTGATGGGCACAGGAGGCACCAATAGCGATTATTGGGGGCAATGCGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS-3UTR CAA 90 bp AGGGGTAGGAAGGGCATAGGAGGAGACCTCGCATTGCCCCCAATAATCGCTATTTCCTTGAAGGAACCCTaGTGCCCACGTTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RGRKGIGGDLALPPIIAISLKEP*CPRFLP
Trigger: GGGGAGGAAACGTGGGCACAAGGGTTCCTTCAAGGA...AATAGCGATTATTGGGGGCAATGCGAGGTCTCCTCCTATGCCCTTCCTACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378373.5
ENST00000378378.9
CDS GCA 90 bp ATGGGCAGCATGCACATGTGTGAATATGCCTGTGCACCATGTGCATaGATGTGTGTGCATCCACGTGTATGTGTGTGCACCGGGTGCATG +
Preference number: 5 (lower is better)
Translates to: MGSMHMCEYACAPCA*MCVHPRVCVCTGCM
Trigger: CATGCACCCGGTGCACACACATACACGTGGATGCACACACATGCATGCACATGGTGCACAGGCATATTCACACATGTGCATGCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS TCA 90 bp GATGCCAGTTCCAACTCGTCAGTGTGCCTGAACCTCATGAACCATTaGGTAAGTGAACACAAATCCGCCAAGGGCTGGAACAGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: DASSNSSVCLNLMNH*VSEHKSAKGWNSSR
Trigger: CCGGGAACTGTTCCAGCCCTTGGCGGATTTGTGTTCACTTACTCAATGGTTCATGAGGTTCAGGCACACTGACGAGTTGGAACTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 90 bp GGTGCATGTGTGTGCAGTGCCTGTGTGTGCATGTATGCAAACGTGTaGATTGTGTGCACATGTGCATGCATCGGTGCAATGCAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GACVCSACVCMYANV*IVCTCACIGAMQCV
Trigger: CACACACTGCATTGCACCGATGCATGCACATGTGCACACAATGCACACGTTTGCATACATGCACACACAGGCACTGCACACACATGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 90 bp CATGTATGCAAACGTGTGCATTGTGTGCACATGTGCATGCATCGGTaGAATGCAGTGTGTGCAAGTGTGCATGCATGTGTGTACTGGCGT +
Preference number: 5 (lower is better)
Translates to: HVCKRVHCVHMCMHR*NAVCASVHACVYWR
Trigger: ACGCCAGTACACACATGCATGCACACTTGCACACACTGCATTGCACCGATGCATGCACATGTGCACACAATGCACACGTTTGCATACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CCA 90 bp CATCGGTGCAATGCAGTGTGTGCAAGTGTGCATGCATGTGTGTACTaGCGTGCATCCATACATATGCATTGTGTGCACATGGGCACATAC +
Preference number: 5 (lower is better)
Translates to: HRCNAVCASVHACVY*RASIHMHCVHMGTY
Trigger: GTATGTGCCCATGTGCACACAATGCATATGTATGGATGCACGCCAGTACACACATGCATGCACACTTGCACACACTGCATTGCACCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 90 bp TGTGCATTGTGTGCACATGTGCATGCATCGGTGCAATGCAGTGTGTaGAAGTGTGCATGCATGTGTGTACTGGCGTGCATCCATACATAT +
Preference number: 5 (lower is better)
Translates to: CALCAHVHASVQCSV*KCACMCVLACIHTY
Trigger: ATATGTATGGATGCACGCCAGTACACACATGCATGCACACTTGCACACACTGCATTGCACCGATGCATGCACATGTGCACACAATGCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CCA 72 bp GGCCGCCGGGCTCTCTGTGCTCAGGACGATGGGCCATaGCTCCTCGTGCCCCGGGGGCCGAGGCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GRRALCAQDDGP*LLVPRGPRLWG
Trigger: CCCCCACAGCCTCGGCCCCCGGGGCACGAGGAGCCATGGCCCATCGTCCTGAGCACAGAGAGCCCGGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 72 bp CCTCCAAGGAGCTGTCTGAGTGCCGCTGGGCCATGCTaGGCGGCTGTGGGGTCCTGCGCCGCGGGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: PPRSCLSAAGPC*AAVGSCAAGRR
Trigger: CCTCCGCCCCGCGGCGCAGGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp TCTCCTCCAAGGAGCTGTCTGAGTGCCGCTGGGCCATaGTGGGCGGCTGTGGGGTCCTGCGCCGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: SPPRSCLSAAGP*WAAVGSCAAGR
Trigger: CCGCCCCGCGGCGCAGGACCCCACAGCCGCCCAGCATGGCCCAGCGGCACTCAGACAGCTCCTTGGAGGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp CTCTCTGTGCTCAGGACGATGGGCCATGGCTCCTCGTaGCCCGGGGGCCGAGGCTGTGGGGGTGCCGGGACC +
Preference number: 6 (lower is better)
Translates to: LSVLRTMGHGSS*PGGRGCGGAGT
Trigger: GGTCCCGGCACCCCCACAGCCTCGGCCCCCGGGGCACGAGGAGCCATGGCCCATCGTCCTGAGCACAGAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp CTGCTGGGCTCCCGTCCAGGTCCCACCCGGCTCCCCTaGAGTGGTGGGGAGGCAGCCACGGACGGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LLGSRPGPTRLP*SGGEAATDGLQ
Trigger: TTGGAGCCCGTCCGTGGCTGCCTCCCCACCACTGCAGGGGAGCCGGGTGGGACCTGGACGGGAGCCCAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS GCA 72 bp GCCCGGTCACTCGCGGAGTCCGAGGAGAGCAGGAGCTaGTCCTGGCGGCCCTCGCTGTTGCGAAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: ARSLAESEESRS*SWRPSLLRSRV
Trigger: GACCCTGCTTCGCAACAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCTCGGACTCCGCGAGTGACCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp AGGAGAGCAGGAGCTGCTCCTGGCGGCCCTCGCTGTTaGGAAGCAGGGTCACCTGGAAGGGGTGGGGCACGG +
Preference number: 6 (lower is better)
Translates to: RRAGAAPGGPRC*EAGSPGRGGAR
Trigger: CCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCAGGAGCAGCTCCTGCTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 72 bp TCCTGGCGGCCCTCGCTGTTGCGAAGCAGGGTCACCTaGAAGGGGTGGGGCACGGAGGAGCTACGGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SWRPSLLRSRVT*KGWGTEELRLP
Trigger: CGGCAACCGTAGCTCCTCCGTGCCCCACCCCTTCCAGGTGACCCTGCTTCGCAACAGCGAGGGCCGCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 72 bp TGGCTTCCCCAGGCCCTTCATGGCCGCCCGGTAGGATaGGTTCCGCAGGTTCCGCCTCAGCATGCCCCCGGG +
Preference number: 6 (lower is better)
Translates to: WLPQALHGRPVG*VPQVPPQHAPG
Trigger: CCCGGGGGCATGCTGAGGCGGAACCTGCGGAACCAATCCTACCGGGCGGCCATGAAGGGCCTGGGGAAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp GCCAGGCACGACCACTTGCTGATTGGAGACAGGCTGTaGTGCCGCCGGCTGGCCTCGCCAGGGCTACACGTC +
Preference number: 6 (lower is better)
Translates to: ARHDHLLIGDRL*CRRLASPGLHV
Trigger: GACGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp GCTGTCAGCCGGGGCAGGTGTTGCCCACGGCGATTCTaGCCTGGGACCCCAGAGACCTCTCGGCTCCACATG +
Preference number: 6 (lower is better)
Translates to: AVSRGRCCPRRF*PGTPETSRLHM
Trigger: CATGTGGAGCCGAGAGGTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS GCA 72 bp ACCGGCAGACCCAGGTCTGCAGAGGAGGTCAGAGGCTaGACAGCGAGCGCCACCTGCCCCCGAGTGTCACGT +
Preference number: 6 (lower is better)
Translates to: TGRPRSAEEVRG*TASATCPRVSR
Trigger: ACGTGACACTCGGGGGCAGGTGGCGCTCGCTGTGCAGCCTCTGACCTCCTCTGCAGACCTGGGTCTGCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 72 bp GCGGCCTCCCTGCTAAGTACAGCCGCCCCGAAGCTCTaGTGGCGGGCTGGGGTCTTTGCCTTGCTGGCCACA +
Preference number: 6 (lower is better)
Translates to: AASLLSTAAPKL*WRAGVFALLAT
Trigger: TGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGCAGGGAGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 72 bp CAGCCGGGGCAGGTGTTGCCCACGGCGATTCTGCCCTaGGACCCCAGAGACCTCTCGGCTCCACATGCGAAG +
Preference number: 6 (lower is better)
Translates to: QPGQVLPTAILP*DPRDLSAPHAK
Trigger: CTTCGCATGTGGAGCCGAGAGGTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS GCA 72 bp TGTGGCCCTGGGGGATTGCAAAAGGCTGCGCCTCCCTaGAACCCGCCAGCTGAGTCCTCTAGGCCCACAGGC +
Preference number: 6 (lower is better)
Translates to: CGPGGLQKAAPP*NPPAESSRPTG
Trigger: GCCTGTGGGCCTAGAGGACTCAGCTGGCGGGTTGCAGGGAGGCGCAGCCTTTTGCAATCCCCCAGGGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378371.6
CDS GCA 72 bp AGGCACGACCACTTGCTGATTGGAGACAGGCTGTGCTaGCGCCGGCTGGCCTCGCCAGGGCTACACGTCCGT +
Preference number: 6 (lower is better)
Translates to: RHDHLLIGDRLC*RRLASPGLHVR
Trigger: ACGGACGTGTAGCCCTGGCGAGGCCAGCCGGCGGCAGCACAGCCTGTCTCCAATCAGCAAGTGGTCGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp AGCCGCCCCGAAGCTCTGGTGGCGGGCTGGGGTCTTTaGCTTGCTGGCCACAGCCAGGCTCTTAGGGATCAG +
Preference number: 6 (lower is better)
Translates to: SRPEALVAGWGL*LAGHSQALRDQ
Trigger: CTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp GACACAGAAACCGCAGCTGTCAGCCGGGGCAGGTGTTaGCCACGGCGATTCTGCCCTGGGACCCCAGAGACC +
Preference number: 6 (lower is better)
Translates to: DTETAAVSRGRC*PRRFCPGTPET
Trigger: GGTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTGACAGCTGCGGTTTCTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS CCA 72 bp ACCTGCCCCCGAGTGTCACGTAGAGCATGTGCCGAGTaGAAGCCGCGCCTCGGCTCTGAGGTCAGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TCPRVSRRACAE*KPRLGSEVRGA
Trigger: AGCCCCTCTGACCTCAGAGCCGAGGCGCGGCTTCCACTCGGCACATGCTCTACGTGACACTCGGGGGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CAA 72 bp TCCGTCTCCACCCGCAGACGCTCCATCCTGCGGACATaGCCCTCCACGGCCACACGGCTGGTGATGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SVSTRRRSILRT*PSTATRLVMKR
Trigger: CCGCTTCATCACCAGCCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGGAGCGTCTGCGGGTGGAGACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 90 bp GGCTACACGTCCGTCTCCACCCGCAGACGCTCCATCCTGCGGACATaGCCCTCCACGGCCACACGGCTGGTGATGAAGCGGGCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: GYTSVSTRRRSILRT*PSTATRLVMKRAKS
Trigger: GGACTTTGCCCGCTTCATCACCAGCCGTGTGGCCGTGGAGGGCAATGTCCGCAGGATGGAGCGTCTGCGGGTGGAGACGGACGTGTAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 90 bp AGTACAGCCGCCCCGAAGCTCTGGTGGCGGGCTGGGGTCTTTGCCTaGCTGGCCACAGCCAGGCTCTTAGGGATCAGCTGTTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: STAAPKLWWRAGVFA*LATARLLGISCWVP
Trigger: GGGCACCCAACAGCTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp AGCGTATCCATCAGGAGGGGCAGCCGGGTCACCCGCTaGATGGGGAGGATCAGGAAGGAGAGCATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SVSIRRGSRVTR*MGRIRKESMGR
Trigger: CCTGCCCATGCTCTCCTTCCTGATCCTCCCCATGCAGCGGGTGACCCGGCTGCCCCTCCTGATGGATACGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS GCA 72 bp CTGTCTCTCACTGTGTGTGAGCGCCACGATCCACCGTaGCCGGTCACTCGCGGAGTCCGAGGAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LSLTVCERHDPP*PVTRGVRGEQE
Trigger: CTCCTGCTCTCCTCGGACTCCGCGAGTGACCGGGCACGGTGGATCGTGGCGCTCACACACAGTGAGAGACAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 72 bp GCTAAGTACAGCCGCCCCGAAGCTCTGGTGGCGGGCTaGGGTCTTTGCCTTGCTGGCCACAGCCAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: AKYSRPEALVAG*GLCLAGHSQAL
Trigger: AAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGCGGCTGTACTTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CCA 72 bp GTGGAGAGCTGGTCCAGGATGCCCAATTCCACCACCTaGGGGGACACAGGCCCAGGAGCTCTCGGTCACACG +
Preference number: 6 (lower is better)
Translates to: VESWSRMPNSTT*GDTGPGALGHT
Trigger: CGTGTGACCGAGAGCTCCTGGGCCTGTGTCCCCCCAGGTGGTGGAATTGGGCATCCTGGACCAGCTCTCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445297.5
CDS CCA 72 bp TGTAGCTCTCCTCGCTGTGGAGACACGGGCAGTCGGTaGGACGGTCCCACCCAGCTCCTACCCAGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: CSSPRCGDTGSR*DGPTQLLPSAA
Trigger: AGCAGCACTGGGTAGGAGCTGGGTGGGACCGTCCCACCGACTGCCCGTGTCTCCACAGCGAGGAGAGCTACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CAA 72 bp GCCCCGAAGCTCTGGTGGCGGGCTGGGGTCTTTGCCTaGCTGGCCACAGCCAGGCTCTTAGGGATCAGCTGT +
Preference number: 6 (lower is better)
Translates to: APKLWWRAGVFA*LATARLLGISC
Trigger: ACAGCTGATCCCTAAGAGCCTGGCTGTGGCCAGCAAGGCAAAGACCCCAGCCCGCCACCAGAGCTTCGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CAA 72 bp TTCCGCAGGTTCCGCCTCAGCATGCCCCCGGGGTCCTaGTCCACGTCCATGTCATCCAGGGAGAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: FRRFRLSMPPGS*STSMSSREKLG
Trigger: CCCCAGCTTCTCCCTGGATGACATGGACGTGGACAAGGACCCCGGGGGCATGCTGAGGCGGAACCTGCGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS CAA 72 bp AGACACAGAAACCGCAGCTGTCAGCCGGGGCAGGTGTaGCCCACGGCGATTCTGCCCTGGGACCCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: RHRNRSCQPGQV*PTAILPWDPRD
Trigger: GTCTCTGGGGTCCCAGGGCAGAATCGCCGTGGGCAACACCTGCCCCGGCTGACAGCTGCGGTTTCTGTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS TCA 72 bp TGGCAGCCTTGTACCTTTCGGAGTGGCCCTGGGTCTTaGGGCAGAGCGTATCCATCAGGAGGGGCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: WQPCTFRSGPGS*GRAYPSGGAAG
Trigger: CCCGGCTGCCCCTCCTGATGGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS GCA 72 bp CCCGGTAGGATTGGTTCCGCAGGTTCCGCCTCAGCATaGCCCCGGGGTCCTTGTCCACGTCCATGTCATCCA +
Preference number: 6 (lower is better)
Translates to: PGRIGSAGSASA*PRGPCPRPCHP
Trigger: TGGATGACATGGACGTGGACAAGGACCCCGGGGGCATGCTGAGGCGGAACCTGCGGAACCAATCCTACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS GCA 72 bp GGCTCAGGTAGGTCCGATCCTGGAGTAGGCCTGTCCTaGCGAGGGCCTATCCCCGTCACCTTCCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: GSGRSDPGVGLS*RGPIPVTFLSV
Trigger: CACAGAGAGGAAGGTGACGGGGATAGGCCCTCGGCAGGACAGGCCTACTCCAGGATCGGACCTACCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445297.5
CDS CCA 72 bp GCACGGCTGGCAGCCTTGTACCTTTCGGAGTGGCCCTaGGTCTTGAGGCAGAGCGTATCCATCAGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: ARLAALYLSEWP*VLRQSVSIRRG
Trigger: GCCCCTCCTGATGGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS CAA 72 bp CTGGCAGCCTTGTACCTTTCGGAGTGGCCCTGGGTCTaGAGGCAGAGCGTATCCATCAGGAGGGGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LAALYLSEWPWV*RQSVSIRRGSR
Trigger: CCGGCTGCCCCTCCTGATGGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS CAA 90 bp GCCTGCTGCAGTGTGACCTCGTCTGCTTGCTTCGCGAAGAAGGCCTaGGTGATCTCCACCTGGGGCAGGTCTCCTTTGCTGGAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: ACCSVTSSACFAKKA*VISTWGRSPLLERP
Trigger: GGGCCTCTCCAGCAAAGGAGACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 90 bp CAGAACCAGGACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTGCTaGCTTCGCGAAGAAGGCCTTGGTGATCTCCACCTGGGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: QNQDHVRLLQCDLVC*LREEGLGDLHLGQV
Trigger: GACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS TCA 72 bp GCTGCAGAACCAGGACCACGTCCGCCTGCTGCAGTGTaGCCTCGTCTGCTTGCTTCGCGAAGAAGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: AAEPGPRPPAAV*PRLLASRRRPW
Trigger: CCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTGCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS TCA 72 bp CCCAGCGTCTTCTTGTTTTTGGCCGGGCTCCGAGTATaGGGCTGGCTGGGTTCCTCAGCCAGAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PSVFLFLAGLRV*GWLGSSARAWS
Trigger: GCTCCAGGCTCTGGCTGAGGAACCCAGCCAGCCTCATACTCGGAGCCCGGCCAAAAACAAGAAGACGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378378.9
CDS TCA 72 bp TGTGGGCTGGCATCCCACACACACAGCCCATGCTGGTaGGCCTCTCTGAGCCCCTCTCTGCGTCCACAGAAC +
Preference number: 6 (lower is better)
Translates to: CGLASHTHSPCW*ASLSPSLRPQN
Trigger: GTTCTGTGGACGCAGAGAGGGGCTCAGAGAGGCTCACCAGCATGGGCTGTGTGTGTGGGATGCCAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 72 bp CCATCCTCCTGCTGCAGAACCAGGACCACGTCCGCCTaGTGCAGTGTGACCTCGTCTGCTTGCTTCGCGAAG +
Preference number: 6 (lower is better)
Translates to: PSSCCRTRTTSA*CSVTSSACFAK
Trigger: CTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTGCAGCAGGAGGATGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 72 bp TCCAGGATGTTGGAGAAGAGGTGGTGGTGCTCCATCTaGGTCACGGTCGCCCGCAGCTCCTTGGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: SRMLEKRWWCSI*VTVARSSLDCR
Trigger: CCTGCAGTCCAAGGAGCTGCGGGCGACCGTGACCCAGATGGAGCACCACCACCTCTTCTCCAACATCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000445297.5
CDS CCA 72 bp TGCAGCGTGTACATCTGCTCCATGCGCTCCATCCTGTaGGCCCCCTCGTTGCACTGCCTCACCAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: CSVYICSMRSIL*APSLHCLTSLL
Trigger: CAGCAAGCTGGTGAGGCAGTGCAACGAGGGGGCCCACAGGATGGAGCGCATGGAGCAGATGTACACGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 90 bp TGCCTCACCAGCTTGCTGATGGCCTTCAGTGCACGGCTGGCAGCCTaGTACCTTTCGGAGTGGCCCTGGGTCTTGAGGCAGAGCGTATCC +
Preference number: 6 (lower is better)
Translates to: CLTSLLMAFSARLAA*YLSEWPWVLRQSVS
Trigger: GGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAGCAAGCTGGTGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS GCA 72 bp GTTGCACTGCCTCACCAGCTTGCTGATGGCCTTCAGTaGACGGCTGGCAGCCTTGTACCTTTCGGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: VALPHQLADGLQ*TAGSLVPFGVA
Trigger: GGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAGCAAGCTGGTGAGGCAGTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS GCA 72 bp ACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTGCTTaGTTCGCGAAGAAGGCCTTGGTGATCTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: TTSACCSVTSSA*FAKKALVISTW
Trigger: CCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp CAGGACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTaGTTGCTTCGCGAAGAAGGCCTTGGTGATCTCCAC +
Preference number: 6 (lower is better)
Translates to: QDHVRLLQCDLV*LLREEGLGDLH
Trigger: GTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp TCCTCCTGCTGCAGAACCAGGACCACGTCCGCCTGCTaGAGTGTGACCTCGTCTGCTTGCTTCGCGAAGAAG +
Preference number: 6 (lower is better)
Translates to: SSCCRTRTTSAC*SVTSSACFAKK
Trigger: CTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTCCTGGTTCTGCAGCAGGAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CCA 72 bp CTGGAGGACTCATCGAGGATGTCGTCATCAGACTCCTaGCTGGTGTTCAGGCCCCGCTCCTGGATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LEDSSRMSSSDS*LVFRPRSWISW
Trigger: CCAGGAGATCCAGGAGCGGGGCCTGAACACCAGCCAGGAGTCTGATGACGACATCCTCGATGAGTCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS CCA 72 bp CACAGAACAGAGGCCATGGCTTTCGAGTCCTCCTCGTaGCTATCACCGGCAGACCCAGGTCTGCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: HRTEAMAFESSS*LSPADPGLQRR
Trigger: CCTCCTCTGCAGACCTGGGTCTGCCGGTGATAGCCACGAGGAGGACTCGAAAGCCATGGCCTCTGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CCA 72 bp CTCCAAGAGTTCCCGCGTCCCACAGAACAGAGGCCATaGCTTTCGAGTCCTCCTCGTGGCTATCACCGGCAG +
Preference number: 6 (lower is better)
Translates to: LQEFPRPTEQRP*LSSPPRGYHRQ
Trigger: CTGCCGGTGATAGCCACGAGGAGGACTCGAAAGCCATGGCCTCTGTTCTGTGGGACGCGGGAACTCTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS CAA 72 bp AGCTTGCTGATGGCCTTCAGTGCACGGCTGGCAGCCTaGTACCTTTCGGAGTGGCCCTGGGTCTTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLLMAFSARLAA*YLSEWPWVLRQ
Trigger: CTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAAGGCCATCAGCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS CAA 72 bp GACCACGTCCGCCTGCTGCAGTGTGACCTCGTCTGCTaGCTTCGCGAAGAAGGCCTTGGTGATCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: DHVRLLQCDLVC*LREEGLGDLHL
Trigger: CAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGCGGACGTGGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS TCA 72 bp CAAATCCGCCAAGGGCTGGAACAGTTCCCGGCACAGTaGGCTCTGTGGGTGGCGGCGACCACAAAGTTATCC +
Preference number: 6 (lower is better)
Translates to: QIRQGLEQFPAQ*ALWVAATTKLS
Trigger: GGATAACTTTGTGGTCGCCGCCACCCACAGAGCTCACTGTGCCGGGAACTGTTCCAGCCCTTGGCGGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 72 bp GGAAGGCGGCGTTGCTGCTTATCAGCTTCTGCAGCGTaGGCTGTTGGTAGACCTCGTTGGAGCAGTAGGCGA +
Preference number: 6 (lower is better)
Translates to: GRRRCCLSASAA*AVGRPRWSSRR
Trigger: TCGCCTACTGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGATAAGCAGCAACGCCGCCTTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000445297.5
ENST00000464620.1
ENST00000485984.1
CDS CCA 72 bp CAATGGTGGCGTCCACCTTCTGGGTTCCCTCGGGGCTaGAGGACTCATCGAGGATGTCGTCATCAGACTCCT +
Preference number: 6 (lower is better)
Translates to: QWWRPPSGFPRG*RTHRGCRHQTP
Trigger: AGGAGTCTGATGACGACATCCTCGATGAGTCCTCCAGCCCCGAGGGAACCCAGAAGGTGGACGCCACCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS CCA 72 bp TTCAGTGCACGGCTGGCAGCCTTGTACCTTTCGGAGTaGCCCTGGGTCTTGAGGCAGAGCGTATCCATCAGG +
Preference number: 6 (lower is better)
Translates to: FSARLAALYLSE*PWVLRQSVSIR
Trigger: CCTGATGGATACGCTCTGCCTCAAGACCCAGGGCCACTCCGAAAGGTACAAGGCTGCCAGCCGTGCACTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000485984.1
CDS CAA 72 bp CCCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTTGGCTaGGGCAACCCTGCCATGTGTAGCCTCAGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: PWGPQEFEVLFG*GNPAMCSLRKL
Trigger: AAGCTTCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CAA 72 bp CACATCCCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTaGGCTTGGGCAACCCTGCCATGTGTAGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: HIPGAPRSLRFC*AWATLPCVASG
Trigger: TCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGGGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CAA 90 bp TCGGAAGGCGGCGTTGCTGCTTATCAGCTTCTGCAGCGTGCGCTGTaGGTAGACCTCGTTGGAGCAGTAGGCGATGTAGGGGTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: SEGGVAAYQLLQRAL*VDLVGAVGDVGVEV
Trigger: CACTTCCACCCCTACATCGCCTACTGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGATAAGCAGCAACGCCGCCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000445297.5
ENST00000464620.1
ENST00000485984.1
CDS CAA 90 bp TCTGCACATCCCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTTGGCTaGGGCAACCCTGCCATGTGTAGCCTCAGGAAGCTTAGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: SAHPWGPQEFEVLFG*GNPAMCSLRKLSSV
Trigger: GACTGAGCTAAGCTTCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGGGATGTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS TCA 72 bp GGATGCTCAGGCTGTGCTGGTAGGAGAACTCCGACGTaGGGATCTCGAACATGGCCTCCTGCCTTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: GCSGCAGRRTPT*GSRTWPPAFSA
Trigger: AGCGGAAAAGGCAGGAGGCCATGTTCGAGATCCTCACGTCGGAGTTCTCCTACCAGCACAGCCTGAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000445297.5
CDS TCA 72 bp CATGCACACTCACACATACATGGACGTGGCAGGAGCTaGGCTCAGCTCCCAGAGGCAGCACACAGCAAGCAC +
Preference number: 6 (lower is better)
Translates to: HAHSHIHGRGRS*AQLPEAAHSKH
Trigger: GTGCTTGCTGTGTGCTGCCTCTGGGAGCTGAGCTCAGCTCCTGCCACGTCCATGTATGTGTGAGTGTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485984.1
CDS GCA 72 bp GGGAGGGACTTGACCTTGCTGAAGTCCAGCTGTGTGTaGAGCGTGTACATCTGCTCCATGCGCTCCATCCTG +
Preference number: 6 (lower is better)
Translates to: GRDLTLLKSSCV*SVYICSMRSIL
Trigger: CAGGATGGAGCGCATGGAGCAGATGTACACGCTGCACACACAGCTGGACTTCAGCAAGGTCAAGTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS GCA 72 bp CTGCCATGTGTAGCCTCAGGAAGCTTAGCTCAGTCCTaGCATGTGCGGGGCTGTGTGTATGGGCAGCATGCA +
Preference number: 6 (lower is better)
Translates to: LPCVASGSLAQS*HVRGCVYGQHA
Trigger: TGCATGCTGCCCATACACACAGCCCCGCACATGGCAGGACTGAGCTAAGCTTCCTGAGGCTACACATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CCA 72 bp AGGACTCATCGAGGATGTCGTCATCAGACTCCTGGCTaGTGTTCAGGCCCCGCTCCTGGATCTCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: RTHRGCRHQTPG*CSGPAPGSPGR
Trigger: TCTACCAGGAGATCCAGGAGCGGGGCCTGAACACCAGCCAGGAGTCTGATGACGACATCCTCGATGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
CDS CCA 72 bp TCTCGAACATGGCCTCCTGCCTTTTCCGCTCCTCAGTaGAGAGCTGGTCCAGGATGCCCAATTCCACCACCT +
Preference number: 6 (lower is better)
Translates to: SRTWPPAFSAPQ*RAGPGCPIPPP
Trigger: AGGTGGTGGAATTGGGCATCCTGGACCAGCTCTCCACTGAGGAGCGGAAAAGGCAGGAGGCCATGTTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000445297.5
CDS CCA 72 bp CCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTTGGCTTaGGCAACCCTGCCATGTGTAGCCTCAGGAAGCTTA +
Preference number: 6 (lower is better)
Translates to: PGAPRSLRFCLA*ATLPCVASGSL
Trigger: TAAGCTTCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CAA 72 bp GGCGTTGCTGCTTATCAGCTTCTGCAGCGTGCGCTGTaGGTAGACCTCGTTGGAGCAGTAGGCGATGTAGGG +
Preference number: 6 (lower is better)
Translates to: GVAAYQLLQRAL*VDLVGAVGDVG
Trigger: CCCTACATCGCCTACTGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGATAAGCAGCAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000445297.5
ENST00000464620.1
ENST00000485984.1
CDS CAA 72 bp AGTGTGACCTCGTCTGCTTGCTTCGCGAAGAAGGCCTaGGTGATCTCCACCTGGGGCAGGTCTCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: SVTSSACFAKKA*VISTWGRSPLL
Trigger: CAGCAAAGGAGACCTGCCCCAGGTGGAGATCACCAAGGCCTTCTTCGCGAAGCAAGCAGACGAGGTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000485984.1
CDS CAA 90 bp CCATTTCTGCACATCCCTGGGGCCCCCAGGAGTTTGAGGTTCTGTTaGGCTTGGGCAACCCTGCCATGTGTAGCCTCAGGAAGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: PFLHIPGAPRSLRFC*AWATLPCVASGSLA
Trigger: AGCTAAGCTTCCTGAGGCTACACATGGCAGGGTTGCCCAAGCCAAACAGAACCTCAAACTCCTGGGGGCCCCAGGGATGTGCAGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS CCA 72 bp TCAGCTTCTGCAGCGTGCGCTGTTGGTAGACCTCGTTaGAGCAGTAGGCGATGTAGGGGTGGAAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: SASAACAVGRPR*SSRRCRGGSAS
Trigger: AGAAGCACTTCCACCCCTACATCGCCTACTGCTCCAACGAGGTCTACCAACAGCGCACGCTGCAGAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000378371.6
ENST00000378373.5
ENST00000378378.9
ENST00000418137.1
ENST00000445297.5
ENST00000464620.1
ENST00000485984.1
CDS GCA 72 bp GAACCCTTGTGCCCACGTTTCCTCCCCAGCGTCTTCTaGACAAAAGAGAGACACAGAAACCGCAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: EPLCPRFLPSVF*TKERHRNRSCQ
Trigger: CTGACAGCTGCGGTTTCTGTGTCTCTCTTTTGTGCAGAAGACGCTGGGGAGGAAACGTGGGCACAAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378373.5
CDS GCA 72 bp TGTGCACATGTGCATGCATCGGTGCAATGCAGTGTGTaGAAGTGTGCATGCATGTGTGTACTGGCGTGCATC +
Preference number: 6 (lower is better)
Translates to: CAHVHASVQCSV*KCACMCVLACI
Trigger: GATGCACGCCAGTACACACATGCATGCACACTTGCACACACTGCATTGCACCGATGCATGCACATGTGCACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS TCA 72 bp GTCAGTGTGCCTGAACCTCATGAACCATTGAGTAAGTaGACACAAATCCGCCAAGGGCTGGAACAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: VSVPEPHEPLSK*TQIRQGLEQFP
Trigger: CGGGAACTGTTCCAGCCCTTGGCGGATTTGTGTTCACTTACTCAATGGTTCATGAGGTTCAGGCACACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS TCA 72 bp TCCAACTCGTCAGTGTGCCTGAACCTCATGAACCATTaGGTAAGTGAACACAAATCCGCCAAGGGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SNSSVCLNLMNH*VSEHKSAKGWN
Trigger: GTTCCAGCCCTTGGCGGATTTGTGTTCACTTACTCAATGGTTCATGAGGTTCAGGCACACTGACGAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1
CDS GCA 72 bp ATGTATGCAAACGTGTGCATTGTGTGCACATGTGCATaGATCGGTGCAATGCAGTGTGTGCAAGTGTGCATG +
Preference number: 6 (lower is better)
Translates to: MYANVCIVCTCA*IGAMQCVQVCM
Trigger: CATGCACACTTGCACACACTGCATTGCACCGATGCATGCACATGTGCACACAATGCACACGTTTGCATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464620.1