RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF15 (Homo sapiens)

Ensembl gene IDs: ENSG00000198844

Ensembl transcript IDs: ENST00000361926.8, ENST00000421050.2, ENST00000455564.3, ENST00000578286.1, ENST00000579439.5, ENST00000581809.1, ENST00000583529.1, ENST00000647883.1

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTaGCAGGCCGTTGGCTGCTCCATAACATTGCCCTGCAACTGCCAC +
Preference number: 1 (lower is better)
Translates to: PQDPATGHLQSLGLL*QAVGCSITLPCNCH
Trigger: GTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp ACTTCAGGGGCCTCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTaGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTG +
Preference number: 1 (lower is better)
Translates to: TSGASGPSYWPSSVP*APLPGRWLLHNIAL
Trigger: CAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGAGGCCCCTGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp ATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGATGGGGTTaGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCC +
Preference number: 1 (lower is better)
Translates to: MRGTGSSGSRCSGWG*AATPALQSLPTVWP
Trigger: GGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp ACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTaGTCCATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCC +
Preference number: 1 (lower is better)
Translates to: TGHLQSLGLLCQAVG*SITLPCNCHRTLAS
Trigger: GGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp CTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTaGATGGGGTTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCAC +
Preference number: 1 (lower is better)
Translates to: LWYHARHWLIWKQML*MGLGSHTRSPISPH
Trigger: GTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: LLCQAVGCSITLPCN*HRTLASKRPKAQGS
Trigger: AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTaGAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAG +
Preference number: 1 (lower is better)
Translates to: LGLLCQAVGCSITLP*NCHRTLASKRPKAQ
Trigger: CTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp AGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTaGCTGCTCCATAACATTGCCCTGCAACTGCCACAGAACCCTAGC +
Preference number: 1 (lower is better)
Translates to: SYWPSSVPWAPLPGR*LLHNIALQLPQNPS
Trigger: GCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGATaGGGTTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTT +
Preference number: 1 (lower is better)
Translates to: GIMRGTGSSGSRCSG*GWAATPALQSLPTV
Trigger: AACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 90 bp TCTCCAATGTCATGGACATGCCAAATGCCAGTGCTCTTCGCCCTCTaGGTCTCCCGGAGTCCCTGTGCCTCCTGCAGTCAGGGTGACAGT +
Preference number: 1 (lower is better)
Translates to: SPMSWTCQMPVLFAL*VSRSPCASCSQGDS
Trigger: ACTGTCACCCTGACTGCAGGAGGCACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATGACATTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 90 bp CCACCGTGCCCGGCCTTCTTTGTGGAGGTGGGATTTAGCTGGAGCTaGAGGTTAGTCTGCCCTCAGGTAGAAGCATGGTGGGGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: PPCPAFFVEVGFSWS*RLVCPQVEAWWGEN
Trigger: GTTCTCTCCCCACCATGCTTCTACCTGAGGGCAGACTAACCTTCAGCTCCAGCTAAATCCCACCTCCACAAAGAAGGCCGGGCACGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581809.1
3UTR GCA 90 bp AGGCAGGAATTATGGAGGCCAGTGTTTGGGGCAAGGAGAAGGGTCTaGAGACTTCAGGGGCCTCAGGACCCAGCTACTGGCCATCTTCAG +
Preference number: 1 (lower is better)
Translates to: RQELWRPVFGARRRV*RLQGPQDPATGHLQ
Trigger: CTGAAGATGGCCAGTAGCTGGGTCCTGAGGCCCCTGAAGTCTGCAGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATAATTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CACTGTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATaGGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGATGGGGTT +
Preference number: 1 (lower is better)
Translates to: HCLPCCLCPSPPLVS*EALAHLEADALDGV
Trigger: AACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp TGGGGTTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTaGCCCAGTGTTTCTGTGAGAGGATCAGGACAAAGGCAAGAAAGC +
Preference number: 1 (lower is better)
Translates to: WGWAATPALQSLPTV*PSVSVRGSGQRQES
Trigger: GCTTTCTTGCCTTTGTCCTGATCCTCTCACAGAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 90 bp CACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCTGTaGGAGGATCAGGACAAAGGCAAGAAAGCCCAGGAGGTTCACTGG +
Preference number: 1 (lower is better)
Translates to: HPLSNLSPLFGPVFL*EDQDKGKKAQEVHW
Trigger: CCAGTGAACCTCCTGGGCTTTCTTGCCTTTGTCCTGATCCTCTCACAGAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CCACTGACAGTGAATCCAATGGATGAATGGGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTCCCAACATGTGCCCCCTCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: PLTVNPMDEWALFSP*HTGRCLPTCAPSSA
Trigger: GGCTGAGGAGGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCATTGGATTCACTGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CTCATTGGCCATAGGCTCAGCCAGCTCAGTACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCATTGGCCACACATTCAAGGCATCCT +
Preference number: 1 (lower is better)
Translates to: LIGHRLSQLSTHWLL*TKPLSPLATHSRHP
Trigger: AGGATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTGGCTGAGCCTATGGCCAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp GAATACTCATTGGCCATAGGCTCAGCCAGCTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGTCTCCATTGGCCACACATTCAAGGC +
Preference number: 1 (lower is better)
Translates to: EYSLAIGSASSVPIG*SALSLCLHWPHIQG
Trigger: GCCTTGAATGTGTGGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTGGCTGAGCCTATGGCCAATGAGTATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCTCTGTCTCCATTGGCCACACATTCA +
Preference number: 1 (lower is better)
Translates to: AGILIGHRLSQLSTH*LLCTKPLSPLATHS
Trigger: TGAATGTGTGGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp CCACGAGAGGTAGTATCTCCACTGACAGTGAATCCAATGGATGAATaGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACA +
Preference number: 1 (lower is better)
Translates to: PREVVSPLTVNPMDE*ALFSPCHTGRCLPT
Trigger: TGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCATTGGATTCACTGTCAGTGGAGATACTACCTCTCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp TCCTCATTCATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAG +
Preference number: 1 (lower is better)
Translates to: SSFILIAVGSGGRFH*LLCPEARSLWLPRE
Trigger: CTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp CCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAGCTC +
Preference number: 1 (lower is better)
Translates to: PLATHSRHPHSFLLL*VQAAVFIGCSVLKL
Trigger: GAGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GCTCTCATCCCCTGGGTGCCAAGCCACACCCAGCACAGTCTCTTCTaGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAATAGGAAAA +
Preference number: 1 (lower is better)
Translates to: ALIPWVPSHTQHSLF*SSDLASFLERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGTGTGGCTTGGCACCCAGGGGATGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp CTGGTGGATTATAGTTCAAGTTGGGAGATCTGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCAAGGAGAAGGGTCTGCAGACTTCAG +
Preference number: 1 (lower is better)
Translates to: LVDYSSSWEICRQEL*RPVFGARRRVCRLQ
Trigger: CTGAAGTCTGCAGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCAGATCTCCCAACTTGAACTATAATCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp AGCTCAGTACCCATTGGCTGCTCTGCACTAAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGG +
Preference number: 1 (lower is better)
Translates to: SSVPIGCSALSLCLH*PHIQGILIHSYCCG
Trigger: CCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTaGATTATAGTTCAAGTTGGGAGATCTGCAGGCAGGAATTATGGA +
Preference number: 1 (lower is better)
Translates to: AGSNVVPKLKAEAGW*IIVQVGRSAGRNYG
Trigger: TCCATAATTCCTGCCTGCAGATCTCCCAACTTGAACTATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp AAAGACAGGACCAGTCATTGCTGCAGAAACAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTT +
Preference number: 1 (lower is better)
Translates to: KDRTSHCCRNKQGDY*SLGSRSPFSLADWL
Trigger: AAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTaGTGGATTATAGTTCAAGTTGGGAGATCTGCAGGCAGGAATTAT +
Preference number: 1 (lower is better)
Translates to: DAGSNVVPKLKAEAG*WIIVQVGRSAGRNY
Trigger: ATAATTCCTGCCTGCAGATCTCCCAACTTGAACTATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 90 bp CAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTaGCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGA +
Preference number: 1 (lower is better)
Translates to: QFYPTTLSPMRPFFN*HDLDLSSLALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTaGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTA +
Preference number: 1 (lower is better)
Translates to: DYWSLGSRSPFSLAD*LPAHSCSQFYPTTL
Trigger: TAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 90 bp AGCACAATCACCACACACACACCACAGTCAGCAGAATGCCTTTCCTaGTACATATACACACATATCTACACATGCACATGTACACACACA +
Preference number: 1 (lower is better)
Translates to: STITTHTPQSAECLS*YIYTHIYTCTCTHT
Trigger: TGTGTGTGTACATGTGCATGTGTAGATATGTGTGTATATGTATCAGGAAAGGCATTCTGCTGACTGTGGTGTGTGTGTGGTGATTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGTCCCTTGGGCTCCTCTaGCAGGCCGTTGGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWSLGLL*QAVGCS
Trigger: GGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGA...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCTCATCCCCTGGGTaGCAAGCCACACCCAGCACA +
Preference number: 2 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWLSSPG*QATPST
Trigger: TGTGCTGGGTGTGGCTTGGCACCCAGGGGATGAGAG...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp CAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATaGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAA +
Preference number: 2 (lower is better)
Translates to: QSLGLLCQAVGCSIT*PCNCHRTLASKRPK
Trigger: TTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGAT +
Preference number: 2 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCAVFIG*SVLKLD
Trigger: ATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCSVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGACAGGACCAGTCATTaGTGCAGAAACAAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCDRTSH*CRNKQG
Trigger: ACCCTGCTTGTTTCTGCAGCAATGACTGGTCCTGTC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRGGRFH*LLCPEA
Trigger: AGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCCTGGAAGAGAAGAACTaGCTTGAGAGGGCACAGGAA +
Preference number: 2 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCLEEKN*LERAQE
Trigger: TTCCTGTGCCCTCTCAAGCCAGTTCTTCTCTTCCAG...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTTGGCTGCTCTGTCCTaGAGCTCGATCTCTATGGTT +
Preference number: 2 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRLAALS*SSISMV
Trigger: AACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAA...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCCAGAAACAAGCAGGGTaGCTACTGGTCTCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPQKQAG*LLVSWV
Trigger: GACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTG...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPALFSP*HTGRCL
Trigger: GAGACACCTACCAGTGTGGCACGGAGAGAACAAAGC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCA +
Preference number: 2 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRKQGDY*SLGSRS
Trigger: TGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTT...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGTGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCA +
Preference number: 2 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWCRQEL*RPVFGA
Trigger: TGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCA...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTCACTGGCTGGCCTGTaGTCCACAGCTCCCGTTTCT +
Preference number: 2 (lower is better)
Translates to: SPPLVSCEALAHLEADALSLAGL*STAPVS
Trigger: AGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTTGGCTGCTCTGTCCTaGAGCTCGATCTCTATGGTT +
Preference number: 2 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPLAALS*SSISMV
Trigger: AACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAA...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRLIHSY*CGFRRP
Trigger: CGGCCGCCTGAACCCACAGCAATAAGAATGAATGAG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFTHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCA +
Preference number: 2 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCKQGDY*SLGSRS
Trigger: TGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTT...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCGACTTTATCTCCAATaGGGCCCTTTTTCAACTGCC +
Preference number: 2 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRRLYLQ*GPFSTA
Trigger: GGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFSVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCAGGACCAGTCATTGCTaGAGAAACAAGCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFRTSHC*RNKQGD
Trigger: GTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCT...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 2 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFSLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGCAAGGAGAAGGGTCTaGAGACTTCAGGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKARRRV*RLQGPQ
Trigger: CTGAGGCCCCTGAAGTCTGCAGACCCTTCTCCTTGC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCTTTTTCAACTGCCATaGCCTAGATTTGTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRLFQLP*PRFVFL
Trigger: AAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCCAGAAACAAGCAGGGTaGCTACTGGTCTCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: HNIALQLPQNPSLQETQSQKQAG*LLVSWV
Trigger: GACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTG...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGAAGCATCCAGGAATaGAAACTAGTATTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGSIQE*KLVFPR
Trigger: TCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCAGAAACAAGCAGGGTaGCTACTGGTCTCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKQKQAG*LLVSWV
Trigger: GACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTG...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGAT +
Preference number: 2 (lower is better)
Translates to: HNIALQLPQNPSLQETQSAVFIG*SVLKLD
Trigger: ATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCC +
Preference number: 2 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLTLPCN*HRTLAS
Trigger: GGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGT...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCT +
Preference number: 2 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAQLSTH*LLCTKP
Trigger: AGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp GAGGTAGTATCTCCACTGACAGTGAATCCAATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCC +
Preference number: 2 (lower is better)
Translates to: EVVSPLTVNPMDEWA*FSPCHTGRCLPTCA
Trigger: GGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCATTGGATTCACTGTCAGTGGAGATACTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp CTGTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: LSPLATHSRHPHSFL*LWVQAAVFIGCSVL
Trigger: CAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp GGACCAGTCATTGCTGCAGAAACAAGCAGGGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GPVIAAETSRVTTGL*GPDHHFLWLIGFLL
Trigger: GAGCAGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTAGGACCAGTCATTGCTaGAGAAACAAGCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLARTSHC*RNKQGD
Trigger: GTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCT...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 2 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLASLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGCACTCAGTCATTTGTaGGTCAGGAGCACAATCACC +
Preference number: 2 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKALSHL*VRSTIT
Trigger: GGTGATTGTGCTCCTGACCCACAAATGACTGAGTGC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCCAGCACAGTCTCTTCTaGAGCTCAGACTTAGCATCT +
Preference number: 2 (lower is better)
Translates to: HNIALQLPQNPSLQETQSQHSLF*SSDLAS
Trigger: AGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTG...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SPPLVSCEALAHLEADALDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp CAGCTCAGTACCCATTGGCTGCTCTGCACTAAGCCTCTGTCTCCATaGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QLSTHWLLCTKPLSP*ATHSRHPHSFLLLW
Trigger: CCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp CCAATGAGGCCCTTTTTCAACTGCCATGACCTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: PMRPFFNCHDLDLSS*ALSIAGILIGHRLS
Trigger: GCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCTCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTATTGGCTGCTCTGTCCTaGAGCTCGATCTCTATGGTT +
Preference number: 2 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLLAALS*SSISMV
Trigger: AACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAA...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTTCCATAACATTGCCCTaGAACTGCCACAGAACCCTA +
Preference number: 2 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLASITLP*NCHRTL
Trigger: TAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGA...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: VSIGHTFKASSFILIAVGGGRFH*LLCPEA
Trigger: AGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCC...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTC +
Preference number: 2 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLASFLLL*VQAAVF
Trigger: GAAAACGGCCGCCTGAACCCACAGCAATAAGAATGA...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCT +
Preference number: 2 (lower is better)
Translates to: NCHDLDLSSLALSIAGILQLSTH*LLCTKP
Trigger: AGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGACCATTTTCTTTGGCTaGTTGGCTTCCTGCTCATTC +
Preference number: 2 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKTIFFG*LASCSF
Trigger: GAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGT...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQTHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 2 (lower is better)
Translates to: NCHDLDLSSLALSIAGILSLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAAGTGAATCCAATGGATaGATGGGCTTTGTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPESESNG*MGFVLS
Trigger: GGAGAGAACAAAGCCCATTCATCCATTGGATTCACT...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTC +
Preference number: 2 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPSFLLL*VQAAVF
Trigger: GAAAACGGCCGCCTGAACCCACAGCAATAAGAATGA...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGAT +
Preference number: 2 (lower is better)
Translates to: GMETSISQTQKTGPVIAAAVFIG*SVLKLD
Trigger: ATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: SCSFLFPILSYDFISNEALIHSY*CGFRRP
Trigger: CGGCCGCCTGAACCCACAGCAATAAGAATGAATGAG...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 90 bp ACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTAGATTaGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCAT +
Preference number: 2 (lower is better)
Translates to: TLSPMRPFFNCHDLD*SSLALSIAGILIGH
Trigger: ATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHALFSP*HTGRCL
Trigger: GAGACACCTACCAGTGTGGCACGGAGAGAACAAAGC...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHITHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCG +
Preference number: 2 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHLIHSY*CGFRRP
Trigger: CGGCCGCCTGAACCCACAGCAATAAGAATGAATGAG...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATATCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHISVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR TCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATCGACTTTATCTCCAATaGGGCCCTTTTTCAACTGCC +
Preference number: 2 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHRLYLQ*GPFSTA
Trigger: GGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCG...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGGCCCTTTTTCAACTaGCATGACCTAGATTTGTCT +
Preference number: 2 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHRPFFN*HDLDLS
Trigger: AGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp GGTCTGCAGACTTCAGGGGCCTCAGGACCCAGCTACTaGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GLQTSGASGPSY*PSSVPWAPLPG
Trigger: GCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGAGGCCCCTGAAGTCTGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp GCCTCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTaGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAAC +
Preference number: 3 (lower is better)
Translates to: ASGPSYWPSSVP*APLPGRWLLHN
Trigger: GTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp CGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGATaGGGTTGGGCAGCCACACCCGCTCTCCAATCTCTC +
Preference number: 3 (lower is better)
Translates to: RGTGSSGSRCSG*GWAATPALQSL
Trigger: GAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 72 bp TCATGGACATGCCAAATGCCAGTGCTCTTCGCCCTCTaGGTCTCCCGGAGTCCCTGTGCCTCCTGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: SWTCQMPVLFAL*VSRSPCASCSQ
Trigger: CTGACTGCAGGAGGCACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp CTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTaGAACTGCCACAGAACCCTAGCCTCCAAGAGACCC +
Preference number: 3 (lower is better)
Translates to: LCQAVGCSITLP*NCHRTLASKRP
Trigger: GGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTaGTCCATAACATTGCCCTGCAACTGCCACAGAACC +
Preference number: 3 (lower is better)
Translates to: LQSLGLLCQAVG*SITLPCNCHRT
Trigger: GGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTaGCTGCTCCATAACATTGCCCTGCAACTGCCACAG +
Preference number: 3 (lower is better)
Translates to: PSSVPWAPLPGR*LLHNIALQLPQ
Trigger: CTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp AGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTaGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGG +
Preference number: 3 (lower is better)
Translates to: RQESPGGSLAGL*STAPVSSPRCR
Trigger: CCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp ACTGGCTCATCTGGAAGCAGATGCTCTGGATGGGGTTaGGCAGCCACACCCGCTCTCCAATCTCTCCCCACT +
Preference number: 3 (lower is better)
Translates to: TGSSGSRCSGWG*AATPALQSLPT
Trigger: AGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGTATGGAGGCCAGTGTTaGGGGCAAGGAGAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWYGGQC*GQGEGS
Trigger: AGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATA...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 3 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGCTCGATCTCTATGGTaGCCACGAGAGGTAGTATCT +
Preference number: 3 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRARSLW*PREVVS
Trigger: AGATACTACCTCTCGTGGCAACCATAGAGATCGAGC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGA +
Preference number: 3 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRLDLSS*ALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp CCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATaGGAGGCACTGGCTCATCTGGAAGCAGATGCTCTG +
Preference number: 3 (lower is better)
Translates to: PCCLCPSPPLVS*EALAHLEADAL
Trigger: CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp GGGAGTCTCCAATGTCATGGACATGCCAAATGCCAGTaGTCTTCGCCCTCTGAGTCTCCCGGAGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GSLQCHGHAKCQ*SSPSESPGVPV
Trigger: CACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATGACATTGGAGACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp TCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTaGCTCATCTGGAAGCAGATGCTCTGGATGGGGTTG +
Preference number: 3 (lower is better)
Translates to: SVPRLLWYHARH*LIWKQMLWMGL
Trigger: CAACCCCATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCCCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFPHSFL*LWVQAA
Trigger: GGCCGCCTGAACCCACAGCAATAAGAATGAATGAGG...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp CAGGCCGTTGGCTGCTCCATAACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCCAAGAGACCCAAAGCT +
Preference number: 3 (lower is better)
Translates to: QAVGCSITLPCN*HRTLASKRPKA
Trigger: AGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp CTCATTGGCCATAGGCTCAGCCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCTCTGTCTCCATTGGCC +
Preference number: 3 (lower is better)
Translates to: LIGHRLSQLSTH*LLCTKPLSPLA
Trigger: GGCCAATGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTGGCTGAGCCTATGGCCAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 3 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGA +
Preference number: 3 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFLDLSS*ALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPVTTGL*GPDHHF
Trigger: AAAATGGTGATCTGGACCCAAGAGACCAGTAGTCAC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 72 bp CCGGCCTTCTTTGTGGAGGTGGGATTTAGCTGGAGCTaGAGGTTAGTCTGCCCTCAGGTAGAAGCATGGTGG +
Preference number: 3 (lower is better)
Translates to: PAFFVEVGFSWS*RLVCPQVEAWW
Trigger: CCACCATGCTTCTACCTGAGGGCAGACTAACCTTCAGCTCCAGCTAAATCCCACCTCCACAAAGAAGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581809.1
3UTR-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFVTTGL*GPDHHF
Trigger: AAAATGGTGATCTGGACCCAAGAGACCAGTAGTCAC...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp TTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGATCTCTATGGTTGCCAC +
Preference number: 3 (lower is better)
Translates to: LLLWVQAAVFIG*SVLKLDLYGCH
Trigger: GTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp TATAGTTCAAGTTGGGAGATCTGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCAAGGAGAAGGGTCTGC +
Preference number: 3 (lower is better)
Translates to: YSSSWEICRQEL*RPVFGARRRVC
Trigger: GCAGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCAGATCTCCCAACTTGAACTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR TCA 72 bp AGACAGGACCAGTCATTGCTGCAGAAACAAGCAGGGTaGCTACTGGTCTCTTGGGTCCAGATCACCATTTTC +
Preference number: 3 (lower is better)
Translates to: RQDQSLLQKQAG*LLVSWVQITIF
Trigger: GAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp TGGCCACACATTCAAGGCATCCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: WPHIQGILIHSY*CGFRRPFSLAA
Trigger: AGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp TCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTaGTGGATTATAGTTCAAGTTGGGAGATCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: SNVVPKLKAEAG*WIIVQVGRSAG
Trigger: GCCTGCAGATCTCCCAACTTGAACTATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGACTTAGCATCTTTCTaGGAGCGAATAATAGGAAAA +
Preference number: 3 (lower is better)
Translates to: SPPLVSCEALAHLEADALDLASF*ERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTC...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR GCA 72 bp CCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTaGCATGACCTAGATTTGTCTTCCTTGGCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: PTTLSPMRPFFN*HDLDLSSLALS
Trigger: GCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp GTAGTATCTCCACTGACAGTGAATCCAATGGATGAATaGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGT +
Preference number: 3 (lower is better)
Translates to: VVSPLTVNPMDE*ALFSPCHTGRC
Trigger: ACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCATTGGATTCACTGTCAGTGGAGATACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp ACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: THSRHPHSFLLL*VQAAVFIGCSV
Trigger: GACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp ACCAGTCATTGCTGCAGAAACAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCT +
Preference number: 3 (lower is better)
Translates to: TSHCCRNKQGDY*SLGSRSPFSLA
Trigger: AGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTGCAGCAATGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTGCTCGATCTCTATGGTaGCCACGAGAGGTAGTATCT +
Preference number: 3 (lower is better)
Translates to: VSIGHTFKASSFILIAVGARSLW*PREVVS
Trigger: AGATACTACCTCTCGTGGCAACCATAGAGATCGAGC...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCACCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: GMETSISQTQKTGPVIAAPHSFL*LWVQAA
Trigger: GGCCGCCTGAACCCACAGCAATAAGAATGAATGAGG...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCACTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGA +
Preference number: 3 (lower is better)
Translates to: GMETSISQTQKTGPVIAALDLSS*ALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAG...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CCA 72 bp ACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTaGCTGATTGGCTTCCTGCTCATTCCTGTTCCCAAT +
Preference number: 3 (lower is better)
Translates to: TTGLLGPDHHFL*LIGFLLIPVPN
Trigger: ATTGGGAACAGGAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTACCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLPHSFL*LWVQAA
Trigger: GGCCGCCTGAACCCACAGCAATAAGAATGAATGAGG...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGACTTAGCATCTTTCTaGGAGCGAATAATAGGAAAA +
Preference number: 3 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLADLASF*ERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTC...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 3 (lower is better)
Translates to: LASCSFLFPILSYDFISNMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATTGCCATGACCTAGATTaGTCTTCCTTGGCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHCHDLD*SSLALS
Trigger: GCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCA...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR-3UTR CAA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHVTTGL*GPDHHF
Trigger: AAAATGGTGATCTGGACCCAAGAGACCAGTAGTCAC...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGGACCCACTCCCGGTaGGGGGAGCTTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGTHSR*GELLSP
Trigger: GGGAGAGAGAAGCTCCCCTCACCGGGAGTGGGTCCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCCCGGGGAGCAGGTTCTaGGGAGGCGGAGCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCPGSRF*GGGAPG
Trigger: TCCCGGCGCTCCGCCTCCCCAGAACCTGCTCCCCGG...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGAGTAGTCGGTGGGTaGGGCGGCCCTGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGVVGG*GGPGGC
Trigger: GCAACCACCAGGGCCGCCCCACCCACCGACTACTCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCAGAGGCGTGCAGGGTaGCCCAGACGGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRQRRAG*PRRLGW
Trigger: CCACCCAAGCCGTCTGGGTCACCCTGCACGCCTCTG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGCATGCGCAGCCGGGTaGTGCGCTGGAAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCACAAG*CAGRAV
Trigger: TACTGCCCTTCCAGCGCATCACCCGGCTGCGCATGC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGAATTCCAGGCGCCGTaGCCAGGAGACCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCEFQAP*PGDQGQ
Trigger: CTGCCCCTGGTCTCCTGGTCACGGCGCCTGGAATTC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGAGCGCCGGGACACTaGACTAGGTGTGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGAPGH*TRCGGA
Trigger: AGCACCCCCACACCTAGTCCAGTGTCCCGGCGCTCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCCCGGGGAGCAGGTTCTaGGGAGGCGGAGCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPPGSRF*GGGAPG
Trigger: TCCCGGCGCTCCGCCTCCCCAGAACCTGCTCCCCGG...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCCCCGACGGGGGACCCTaGGGACCTCCTCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPPDGGP*GPPHSP
Trigger: GGGGCTATGAGGAGGTCCCCAGGGTCCCCCGTCGGG...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCCGATGCTTGGAGGGTaGGGGCGGGAGCGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRPMLGG*GREREV
Trigger: GACCTCTCGCTCCCGCCCCCACCCTCCAAGCATCGG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGATCCGGAACCTGCTaGGCCTGGACCAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGSGTC*AWTRER
Trigger: TCGCTCCCTGGTCCAGGCCCAGCAGGTTCCGGATCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGGGCATCTGCATCCTaGGCCCGGCCTTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGASAS*ARPSAP
Trigger: GGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCCCCCACAGCTCCTCTaGCAGCACGGCTGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRPPQLL*QHGCSV
Trigger: TACCGAGCAGCCGTGCTGTCAGAGGAGCTGTGGGGG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGCAGGCAAAGAGGGGTaGAGCGGGGGCGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWAGKEG*SGGARQ
Trigger: TTGCCTCGCGCCCCCGCTTCACCCCTCTTTGCCTGC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCCTGCCACAGGGTGTTaGGAGGTCCAGGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRPATGC*EVQGVV
Trigger: CACGACCCCCTGGACCTCGCAACACCCTGTGGCAGG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAGGGTGACCGATGCTTaGAGGGTGGGGGCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRRVTDA*RVGAGA
Trigger: CGCTCCCGCCCCCACCCTCCAAGCATCGGTCACCCT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCCCCCCACAGCTCCTCTaGCAGCACGGCTGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCPPQLL*QHGCSV
Trigger: TACCGAGCAGCCGTGCTGTCAGAGGAGCTGTGGGGG...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGCATGCGCAGCCGGGTaGTGCGCTGGAAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCACAAG*CAGRAV
Trigger: TACTGCCCTTCCAGCGCATCACCCGGCTGCGCATGC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCCCAGGGGCAGGGCCTTaGCTTTGTGGAAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCPGAGP*LCGSAA
Trigger: GGCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGG...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGCCCTGGTGGTTGCTaGGAAGGGAGAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGPGGC*EGRGGR
Trigger: CCTTCCGCCTCTCCCTTCTCAGCAACCACCAGGGCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCCCAGCCTCCGCACAGTaGCAGGAGCTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCPASAQ*QELRQS
Trigger: GCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGG...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCGGCAGGGTGACCGATaGTTGGAGGGTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALRQGDR*LEGGGG
Trigger: CCCGCCCCCACCCTCCAAGCATCGGTCACCCTGCCG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGAGGGGGCTTCTGCGTaGGGGGTGTTGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGREGASA*GVLLQE
Trigger: TTCCTGCAGCAACACCCCCCACGCAGAAGCCCCCTC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGGAGGCCCTGGGGACTaGGCAGCCCTGGAACGAGAA +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPGGPGD*AALERE
Trigger: TTCTCGTTCCAGGGCTGCCCAGTCCCCAGGGCCTCC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGGAGAGGAGCCATTGTaGGGAGGCCCTGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCGEEPL*GGPGDW
Trigger: CCAGTCCCCAGGGCCTCCCCACAATGGCTCCTCTCC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGAGCACCGTTCTCCTaGGACCCACTCCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGAPFS*DPLPVR
Trigger: CCTCACCGGGAGTGGGTCCCAGGAGAACGGTGCTCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGGAGCACCGTTCTCCTaGGACCCACTCCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCGAPFS*DPLPVR
Trigger: CCTCACCGGGAGTGGGTCCCAGGAGAACGGTGCTCC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCCGCTCGCTGACTCCCTaGACTCGCTGCACATTGGAG +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCRSLTP*TRCTLE
Trigger: CTCCAATGTGCAGCGAGTCCAGGGAGTCAGCGAGCG...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGGTAGGGGGTCCAGATaGATCCGGAACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRGRGSR*IRNLLG
Trigger: GCCCAGCAGGTTCCGGATCCATCTGGACCCCCTACC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGAGTAGTCGGTGGGTaGGGCGGCCCTGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGVVGG*GGPGGC
Trigger: GCAACCACCAGGGCCGCCCCACCCACCGACTACTCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGCTTGGAGTAGTCGGTaGGTGGGGCGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFAWSSR*VGRPWW
Trigger: CCACCAGGGCCGCCCCACCCACCGACTACTCCAAGC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGCTTGGAGTAGTCGGTaGGTGGGGCGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPAWSSR*VGRPWW
Trigger: CCACCAGGGCCGCCCCACCCACCGACTACTCCAAGC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGCTTGGAGTAGTCGGTaGGTGGGGCGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSAWSSR*VGRPWW
Trigger: CCACCAGGGCCGCCCCACCCACCGACTACTCCAAGC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGTTTGGGGGCAGCCCTaGACTCCAGACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCVWGQP*TPDSVL
Trigger: AAGGACGGAGTCTGGAGTCCAGGGCTGCCCCCAAAC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCAGGACAACGGCAGGGTaGCCGATGCTTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCRTTAG*PMLGGW
Trigger: CCACCCTCCAAGCATCGGTCACCCTGCCGTTGTCCT...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGCCCTGGTGGTTGCTaGGAAGGGAGAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGPGGC*EGRGGR
Trigger: CCTTCCGCCTCTCCCTTCTCAGCAACCACCAGGGCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCTTGCTGTGCCTGAGCTaGAGGGGAGGCCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPLLCLS*RGGLVP
Trigger: CGGGACGAGGCCTCCCCTTCAGCTCAGGCACAGCAA...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCACCCCCTTCAAACCTaGCAGCCAGCCTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRHPLQT*QPASAQ
Trigger: CTGTGCGGAGGCTGGCTGGCAGGTTTGAAGGGGGTG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTCACTTAGGGAGGCTCTaGAGCCGGCGCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIHLGRL*SRRSSA
Trigger: CGCCGAGCTGCGCCGGCTGCAGAGCCTCCCTAAGTG...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCCTTCAGGGGTCTTGTaGAGGTGTTTGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRPSGVL*RCLGAA
Trigger: GGCTGCCCCCAAACACCTGCACAAGACCCCTGAAGG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGCAAGGAGAAGGGTCTaGAGACTTCAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCARRRV*RLQGPQ
Trigger: CTGAGGCCCCTGAAGTCTGCAGACCCTTCTCCTTGC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGAGCGCCGGGACACTaGACTAGGTGTGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGAPGH*TRCGGA
Trigger: AGCACCCCCACACCTAGTCCAGTGTCCCGGCGCTCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCCAGACGGCTTGGGTaGGGGGACTGGAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPRRLG*GDWRPG
Trigger: CCCCGGTCTCCAGTCCCCCCACCCAAGCCGTCTGGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGGCCAGGCCAGCATCTaGAGCACCGTTCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRGQASI*STVLLG
Trigger: TCCCAGGAGAACGGTGCTCCAGATGCTGGCCTGGCC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGGCCAGGCCAGCATCTaGAGCACCGTTCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPGQASI*STVLLG
Trigger: TCCCAGGAGAACGGTGCTCCAGATGCTGGCCTGGCC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCAGGTCCAGGGGGTCGTaGGAAGGTGGGTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPRSRGS*EGGCIS
Trigger: GGAGATGCACCCACCTTCCCACGACCCCCTGGACCT...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTGGAAGCGCAGCCTTTaGGTGAGCCGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCWKRSL*VSRISS
Trigger: AGAGCTGATCCGGCTCACCCAAAGGCTGCGCTTCCA...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCAGTCAGCTCTCCCTaGAATTCCAGGCGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCSVSSP*NSRRRD
Trigger: GTCACGGCGCCTGGAATTCCAGGGAGAGCTGACTGA...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCGGAACCTGCTGGGCCTaGACCAGGGAGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFGTCWA*TRERWA
Trigger: TGCCCATCGCTCCCTGGTCCAGGCCCAGCAGGTTCC...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTTGGGTGGGGCGGCCCTaGTGGTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSWVGRP*WLLRRE
Trigger: CTCCCTTCTCAGCAACCACCAGGGCCGCCCCACCCA...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGCCTCGAGAAGCCTCTaGTTCTGGCGAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRASRSL*FWRRCL
Trigger: GAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGCCCAGGAGGTTCACTaGCTGGCCTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCAQEVH*LACGPQ
Trigger: CTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGAGGGCGGGGGCGGATaGTCCGAGGGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHEGGGG*SEGASA
Trigger: CGCAGAAGCCCCCTCGGATCATCCGCCCCCGCCCTC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCTCTCCTGGGGGCTaGGGGTATCCAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIASPGG*GYPEDR
Trigger: GCGGTCTTCTGGATACCCTCAGCCCCCAGGAGAGGC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGCAAGTTGCTGTGCCTaGGCTGAAGGGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSASCCA*AEGEAS
Trigger: CGAGGCCTCCCCTTCAGCTCAGGCACAGCAACTTGC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCTCCTGCAGTCAGGGTaGCAGTGTCAGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRLLQSG*QCQSWA
Trigger: TGCCCAGGACTGACACTGTCACCCTGACTGCAGGAG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCACCCCCTTCAAACCTaGCAGCCAGCCTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFHPLQT*QPASAQ
Trigger: CTGTGCGGAGGCTGGCTGGCAGGTTTGAAGGGGGTG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGAGTGGCAGGAGTTTaGGCTCAGCAGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGVAGV*AQQWSG
Trigger: ACCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCCTGCCACAGGGTGTTaGGAGGTCCAGGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALPATGC*EVQGVV
Trigger: CACGACCCCCTGGACCTCGCAACACCCTGTGGCAGG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAGAAGACCGCTGGCTTaGACAGCCGGAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRRRPLA*TAGSSC
Trigger: GCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCCCTTCAGGGGTCTTGTaGAGGTGTTTGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPPSGVL*RCLGAA
Trigger: GGCTGCCCCCAAACACCTGCACAAGACCCCTGAAGG...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGGAGAGGAGCCATTGTaGGGAGGCCCTGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIGEEPL*GGPGDW
Trigger: CCAGTCCCCAGGGCCTCCCCACAATGGCTCCTCTCC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTATCCAGAAGACCGCTaGCTTGCACAGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCYPEDR*LAQPEA
Trigger: AGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATA...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGTGCATGCGCCTCTCCTaGGGGCTGAGGGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWCMRLS*GLRVSR
Trigger: TCTGGATACCCTCAGCCCCCAGGAGAGGCGCATGCA...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGCGCTCGCTGACTCCCTaGACTCGCTGCACATTGGAG +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWRSLTP*TRCTLE
Trigger: CTCCAATGTGCAGCGAGTCCAGGGAGTCAGCGAGCG...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGGTAGGGGGTCCAGATaGATCCGGAACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFGRGSR*IRNLLG
Trigger: GCCCAGCAGGTTCCGGATCCATCTGGACCCCCTACC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGCCATCTTCAGTCCCTTaGGCTCCTCTGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWPSSVP*APLPGR
Trigger: ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCAGGAGGTTCACTGGCTaGCCTGTGGTCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPRRFTG*PVVHSS
Trigger: GGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCT...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGCCCAGGAGGTTCACTaGCTGGCCTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPAQEVH*LACGPQ
Trigger: CTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAGCAGATGCTCTGGATaGGGTTGGGCAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRSRCSG*GWAATP
Trigger: GGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp GGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATaGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GLLCQAVGCSIT*PCNCHRTLASK
Trigger: CTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCTGGAGCGGTAGGATGTaGGGACAACGGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFWSGRM*GQRQGD
Trigger: GTCACCCTGCCGTTGTCCTCACATCCTACCGCTCCA...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCCCCACAGCTCCTCTaGCAGCACGGCTGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPPQLL*QHGCSV
Trigger: TACCGAGCAGCCGTGCTGTCAGAGGAGCTGTGGGGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCCTAGAAACCGCTCGCTaGCTCCCTGGACTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFLETAR*LPGLAA
Trigger: TGCAGCGAGTCCAGGGAGTCAGCGAGCGGTTTCTAG...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCAGCGCAGCCTTTGGGTaGGCCGGATCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPSAAFG*AGSALQ
Trigger: CTGAAGAGCTGATCCGGCTCACCCAAAGGCTGCGCT...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCAGGGGCAGGGCCTTaGCTTTGTGGAAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPGAGP*LCGSAA
Trigger: GGCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCCTCCTGCAGTCAGGGTaGCAGTGTCAGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPLLQSG*QCQSWA
Trigger: TGCCCAGGACTGACACTGTCACCCTGACTGCAGGAG...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGAGTGGCAGGAGTTTaGGCTCAGCAGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGVAGV*AQQWSG
Trigger: ACCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCCCCACAGCGTGGGCATaGACCACATCACACAAGTCG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCPTAWA*TTSHKS
Trigger: CGACTTGTGTGATGTGGTGCATGCCCACGCTGTGGG...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCTTCAGTCTGCTTCATaGGCCCCACCTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFLQSAS*APPQRC
Trigger: GCAGCGCTGAGGTGGGGCGCATGAAGCAGACTGAAG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGCTCCCAGCCAGCGCTaGATGTCTGATAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRAPSQR*MSDREE
Trigger: TTCTTCCCTATCAGACATGCAGCGCTGGCTGGGAGC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCTHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCTCTCATCCCCTGGGTaGCAAGCCACACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSLSSPG*QATPST
Trigger: TGTGCTGGGTGTGGCTTGGCACCCAGGGGATGAGAG...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCTCCCTTGGGCTCCTCTaGCAGGCCGTTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLSLGLL*QAVGCS
Trigger: GGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGA...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCGCAAGGAGAAGGGTCTaGAGACTTCAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCARRRV*RLQGPQ
Trigger: CTGAGGCCCCTGAAGTCTGCAGACCCTTCTCCTTGC...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCCTCCTCTGGTATCATaGGAGGCACTGGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRPPLVS*EALAHL
Trigger: CAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGAGGGGGCTTCTGCGTaGGGGGTGTTGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIEGASA*GVLLQE
Trigger: TTCCTGCAGCAACACCCCCCACGCAGAAGCCCCCTC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCGGAGGCCCTGGGGACTaGGCAGCCCTGGAACGAGAA +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLGGPGD*AALERE
Trigger: TTCTCGTTCCAGGGCTGCCCAGTCCCCAGGGCCTCC...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATCCCAGACGGCTTGGGTaGGGGGACTGGAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHPRRLG*GDWRPG
Trigger: CCCCGGTCTCCAGTCCCCCCACCCAAGCCGTCTGGG...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTTCTCGCTTGGAGACCTaGCTCCGGGGCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSSRLET*LRGICI
Trigger: GATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGA...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTACATCTGCTCTCGCTTaGAGACCTGGCTCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSTSALA*RPGSGA
Trigger: TGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGT...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCACATCTGCTCTCGCTTaGAGACCTGGCTCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFTSALA*RPGSGA
Trigger: TGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGT...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGGGAGGCTTGAGGAGTaGCAGGAGTTTGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPGRLEE*QEFALS
Trigger: GCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCTGCATGCGCCTCTCCTaGGGGCTGAGGGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFCMRLS*GLRVSR
Trigger: TCTGGATACCCTCAGCCCCCAGGAGAGGCGCATGCA...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCACAAGTCGCTGATGTaGGGGGAAGAGCGCACACGG +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFHKSLM*GEERTR
Trigger: CCGTGTGCGCTCTTCCCCCCACATCAGCGACTTGTG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAAAGGCCCCACAGCGTaGGCATGCACCACATCACAC +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRKGPTA*ACTTSH
Trigger: GTGTGATGTGGTGCATGCCCACGCTGTGGGGCCTTT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGATAGGGAAGAAGCTTaGAGTAGTCGGTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRDREEA*SSRWVG
Trigger: CCCCACCCACCGACTACTCCAAGCTTCTTCCCTATC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTGCTCTGGATGGGGTTaGGCAGCCACACCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALCSGWG*AATPAL
Trigger: GAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGTCCCTCGCCTCCTCTaGTATCATGCGAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPVPRLL*YHARHW
Trigger: CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGAC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCACAGTGCCAGGAGCTaGGGCAGAGCCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALHSARS*GRAILS
Trigger: GCTCAGAATGGCTCTGCCTCAGCTCCTGGCACTGTG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGGGACCCACTCCCGGTaGGGGGAGCTTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPGTHSR*GELLSP
Trigger: GGGAGAGAGAAGCTCCCCTCACCGGGAGTGGGTCCC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCTGGTGGCATCCTGCCTaGCACGAGTTGGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFWWHPA*HELVWE
Trigger: CTCCCAAACCAACTCGTGTCAGGCAGGATGCCACCA...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCTAGAAACCGCTCGCTaGCTCCCTGGACTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALLETAR*LPGLAA
Trigger: TGCAGCGAGTCCAGGGAGTCAGCGAGCGGTTTCTAG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCTTCTGGGCATTCTCCTaGCGGCTGGACCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPFWAFS*RLDPSS
Trigger: AGAAGAGGGGTCCAGCCGTCAGGAGAATGCCCAGAA...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTTCGTGTTCCCCTGTaGCTTCACACACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRFRVPL*LHTPAG
Trigger: CCCAGCTGGTGTGTGAAGTCACAGGGGAACACGAAA...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGGCATTGGGGGTGCCTaGAGAAGATCCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFGIGGA*RRSNSL
Trigger: GAGGCTGTTGGATCTTCTTCAGGCACCCCCAATGCC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCCTCCCCTCCACAGTTaGTGGAGGAGTATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRPPLHS*WRSILR
Trigger: CCTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCCCTCCCCTCCACAGTTaGTGGAGGAGTATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPPPLHS*WRSILR
Trigger: CCTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGG...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTCACTTAGGGAGGCTCTaGAGCCGGCGCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAHLGRL*SRRSSA
Trigger: CGCCGAGCTGCGCCGGCTGCAGAGCCTCCCTAAGTG...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTCTTCAGTCTGCTTCATaGGCCCCACCTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNILQSAS*APPQRC
Trigger: GCAGCGCTGAGGTGGGGCGCATGAAGCAGACTGAAG...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATCCCCTGGGTGCTGGTTCTGGCGAAGGTaGCTCCTCCTTTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QNPSLQETQSSGLSSPGCWFWRR*LLLSCS
Trigger: GGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCA...GCACCCAGGGGATGAGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWTLPCN*HRTLAS
Trigger: GGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGT...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCACTCCCCCAGGCCCTaGACCTGTTTGGATTCCATC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSHSPRP*TCLDSI
Trigger: GATGGAATCCAAACAGGTGCAGGGCCTGGGGGAGTG...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTCTCGCTTGGAGACCTaGCTCCGGGGCATCTGCATC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALSRLET*LRGICI
Trigger: GATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCAGGTCCAGGGGGTCGTaGGAAGGTGGGTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLRSRGS*EGGCIS
Trigger: GGAGATGCACCCACCTTCCCACGACCCCCTGGACCT...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGACTCGCTGCACATTaGAGAAGAGTGTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGLAAH*RRVCGD
Trigger: ATCACCACACACTCTTCTCCAATGTGCAGCGAGTCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTCGCTCGCTGACTCCCTaGACTCGCTGCACATTGGAG +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIRSLTP*TRCTLE
Trigger: CTCCAATGTGCAGCGAGTCCAGGGAGTCAGCGAGCG...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCTCAGTCAGCTCTCCCTaGAATTCCAGGCGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFSVSSP*NSRRRD
Trigger: GTCACGGCGCCTGGAATTCCAGGGAGAGCTGACTGA...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGAGGGCGGGGGCGGATaGTCCGAGGGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFREGGGG*SEGASA
Trigger: CGCAGAAGCCCCCTCGGATCATCCGCCCCCGCCCTC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTGGTGGCATCCTGCCTaGCACGAGTTGGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALWWHPA*HELVWE
Trigger: CTCCCAAACCAACTCGTGTCAGGCAGGATGCCACCA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGCCTCTCCTGGGGGCTaGGGGTATCCAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPASPGG*GYPEDR
Trigger: GCGGTCTTCTGGATACCCTCAGCCCCCAGGAGAGGC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGCCTCTCCTGGGGGCTaGGGGTATCCAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAASPGG*GYPEDR
Trigger: GCGGTCTTCTGGATACCCTCAGCCCCCAGGAGAGGC...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCAGCGCAGCCTTTGGGTaGGCCGGATCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLSAAFG*AGSALQ
Trigger: CTGAAGAGCTGATCCGGCTCACCCAAAGGCTGCGCT...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGGCCCTGGTGGTTGCTaGGAAGGGAGAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKGPGGC*EGRGGR
Trigger: CCTTCCGCCTCTCCCTTCTCAGCAACCACCAGGGCC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGGCATTGGGGGTGCCTaGAGAAGATCCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIGIGGA*RRSNSL
Trigger: GAGGCTGTTGGATCTTCTTCAGGCACCCCCAATGCC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCTGGAGTCATCCCCCTTaGATCCCCTCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFWSHPP*IPSTLS
Trigger: ACTGAGAGTGGAGGGGATTCAAGGGGGATGACTCCA...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421050.2
CDS-3UTR GCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGTGGCTCCGGGGCATCTaGATCCTGAGCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKWLRGI*ILSPAF
Trigger: GAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCA...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCCGGCAGGGTGACCGATaGTTGGAGGGTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILRQGDR*LEGGGG
Trigger: CCCGCCCCCACCCTCCAAGCATCGGTCACCCTGCCG...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGCAGCTCCCAATTCTaGTCCTTCAGCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGSSQF*SFSTSS
Trigger: GCTAGAGGTGCTGAAGGAGCAGAATTGGGAGCTGCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCCTGCCACAGGGTGTTaGGAGGTCCAGGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKPATGC*EVQGVV
Trigger: CACGACCCCCTGGACCTCGCAACACCCTGTGGCAGG...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCAGAAGACCGCTGGCTTaGACAGCCGGAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLRRPLA*TAGSSC
Trigger: GCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCT...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGCTCCCAGCCAGCGCTaGATGTCTGATAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFAPSQR*MSDREE
Trigger: TTCTTCCCTATCAGACATGCAGCGCTGGCTGGGAGC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRTHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTTGCCAGGCCGTTGGCTaGTCCATAACATTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNICQAVG*SITLPC
Trigger: GCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCA...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCAAGGAGAAGGGTCTaGAGACTTCAGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIARRRV*RLQGPQ
Trigger: CTGAGGCCCCTGAAGTCTGCAGACCCTTCTCCTTGC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCCCAATGTCATGGACATaGCAAATGCCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCPMSWT*QMPVLF
Trigger: GAAGAGCACTGGCATTTGGCATGTCCATGACATTGG...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCGGGTTGGTGCATCATTaGAGTTTCGGGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCGLVHH*SFGVVL
Trigger: AAGAACTACCCCGAAACTCCAATGATGCACCAACCC...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCCCGACGGGGGACCCTaGGGACCTCCTCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPPDGGP*GPPHSP
Trigger: GGGGCTATGAGGAGGTCCCCAGGGTCCCCCGTCGGG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAAGGGTGACCGATGCTTaGAGGGTGGGGGCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLRVTDA*RVGAGA
Trigger: CGCTCCCGCCCCCACCCTCCAAGCATCGGTCACCCT...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCCCCTCCACAGTTGCTaGAGGAGTATTCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFPLHSC*RSILRS
Trigger: GCTCCTCAGAATACTCCTCCAGCAACTGTGGAGGGG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCACAAGTCGCTGATGTaGGGGGAAGAGCGCACACGG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLHKSLM*GEERTR
Trigger: CCGTGTGCGCTCTTCCCCCCACATCAGCGACTTGTG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCGACCCCTCTTCTGTCTaGCGCAGGATATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFDPSSV*RRIFCS
Trigger: GCTGCAGAATATCCTGCGCCAGACAGAAGAGGGGTC...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTCAGTCAGCTCTCCCTaGAATTCCAGGCGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALSVSSP*NSRRRD
Trigger: GTCACGGCGCCTGGAATTCCAGGGAGAGCTGACTGA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGTGGGGCGGCCCTGGTaGTTGCTGAGAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPVGRPW*LLRRER
Trigger: CCTCTCCCTTCTCAGCAACCACCAGGGCCGCCCCAC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCACAGTCCTCATAGATaGTGTCTGGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRHSPHR*CLGSRE
Trigger: TTCCCTGCTCCCCAGACACCATCTATGAGGACTGTG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCTCCGTCCTTCAGTCTTaGCAGGTGCAGACGACTCTG +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFSVLQS*QVQTTL
Trigger: CAGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGA...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCAGAAGCCTCTGGTTCTaGCGAAGGTGCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFRSLWF*RRCLLL
Trigger: AAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCT...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGGRFH*LLCPEA
Trigger: AGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCSFLLL*VQAAVF
Trigger: GAAAACGGCCGCCTGAACCCACAGCAATAAGAATGA...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCATCTTCAGTCCCTTaGGCTCCTCTGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPSSVP*APLPGR
Trigger: ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTTCACTGGCTGGCCTGTaGTCCACAGCTCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNISLAGL*STAPVS
Trigger: AGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGA...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTGGAAGCAGATGCTCTaGATGGGGTTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALWKQML*MGLGSH
Trigger: GTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAGGCACTGGCTCATCTaGAAGCAGATGCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRRHWLI*KQMLWM
Trigger: CATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp GGGAGATCTGCAGGCAGGAATTATGGAGGCCAGTGTTaGGGGCAAGGAGAAGGGTCTGCAGACTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRSAGRNYGGQC*GQGEGSADFRG
Trigger: GCCCCTGAAGTCTGCAGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCAGATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAGAATTCCAGGCGCCGTaGCCAGGAGACCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEEFQAP*PGDQGQ
Trigger: CTGCCCCTGGTCTCCTGGTCACGGCGCCTGGAATTC...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCTGCCCACTCTTAGGCTaGGTGATGAGCAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLCPLLG*VMSSRS
Trigger: CGACCTGCTGCTCATCACTCAGCCTAAGAGTGGGCA...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCAGTGAATCCAATGGATaGATGGGCTTTGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PATGHLQSLGLLCQAVGCSESNG*MGFVLS
Trigger: GGAGAGAACAAAGCCCATTCATCCATTGGATTCACT...GCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGTGCTCTTCGCCCTCTaGGTCTCCCGGAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAVLFAL*VSRSPC
Trigger: ACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCAC...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCTTCAAAGGAGTGAGGTaGTCTGCTGGAGTCATCCCC +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFFKGVR*SAGVIP
Trigger: GGGGATGACTCCAGCAGAGCACCTCACTCCTTTGAA...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCTACAGAGGTTCATCCTaGAGGGGCAGCTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPYRGSS*RGSSQF
Trigger: GAATTGGGAGCTGCCCCTGCAGGATGAACCTCTGTA...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCTGCATCTCCAGCATTTaGTGGAGAAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPCISSI*WRRTPI
Trigger: GATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCA...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCCACAGCGTGGGCATaGACCACATCACACAAGTCG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPTAWA*TTSHKS
Trigger: CGACTTGTGTGATGTGGTGCATGCCCACGCTGTGGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTGGTTCTGGCGAAGGTaGCTCCTCCTTTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALWFWRR*LLLSCS
Trigger: GGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCATGCCAAATGCCAGTaGTCTTCGCCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSHAKCQ*SSPSES
Trigger: AGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATG...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGGGAGGCTTGAGGAGTaGCAGGAGTTTGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSGRLEE*QEFALS
Trigger: GCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCTGGAAGCGCAGCCTTTaGGTGAGCCGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLWKRSL*VSRISS
Trigger: AGAGCTGATCCGGCTCACCCAAAGGCTGCGCTTCCA...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCACAGTCCTCATAGATaGTGTCTGGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFHSPHR*CLGSRE
Trigger: TTCCCTGCTCCCCAGACACCATCTATGAGGACTGTG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRSFLLL*VQAAVF
Trigger: GAAAACGGCCGCCTGAACCCACAGCAATAAGAATGA...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRSLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCTGGAAGAGAAGAACTaGCTTGAGAGGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRLEEKN*LERAQE
Trigger: TTCCTGTGCCCTCTCAAGCCAGTTCTTCTCTTCCAG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCAGGCACTGGCTCATCTaGAAGCAGATGCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFRHWLI*KQMLWM
Trigger: CATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCT...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGGCCCTGCACCTGTTTaGATTCCATCTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRGPAPV*IPSSES
Trigger: GCTTTCTGAAGATGGAATCCAAACAGGTGCAGGGCC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR TCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTCGAGGAATGCAGGGCTaGGGTTTCCAAGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIRGMQG*GFQVCV
Trigger: AACACACACTTGGAAACCTCAGCCCTGCATTCCTCG...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361926.8
CDS-3UTR TCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGCAGAGGCGTGCAGGGTaGCCCAGACGGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQQRRAG*PRRLGW
Trigger: CCACCCAAGCCGTCTGGGTCACCCTGCACGCCTCTG...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCACACAGTGCCAGGAGCTaGGGCAGAGCCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPHSARS*GRAILS
Trigger: GCTCAGAATGGCTCTGCCTCAGCTCCTGGCACTGTG...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGGGGCATCTGCATCCTaGGCCCGGCCTTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRGASAS*ARPSAP
Trigger: GGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGCATGCGCAGCCGGGTaGTGCGCTGGAAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPACAAG*CAGRAV
Trigger: TACTGCCCTTCCAGCGCATCACCCGGCTGCGCATGC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCCAGGGGCAGGGCCTTaGCTTTGTGGAAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPPGAGP*LCGSAA
Trigger: GGCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTTGGCTCCGGGGCATCTaGATCCTGAGCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPWLRGI*ILSPAF
Trigger: GAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCA...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAACAGCCGGAAGCTCCTaGCACAGGGTGTTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPTAGSS*HRVLRG
Trigger: ACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGT...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATACAGCCGGAAGCTCCTaGCACAGGGTGTTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHTAGSS*HRVLRG
Trigger: ACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGT...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTAGAAGACCGCTGGCTTaGACAGCCGGAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLARRPLA*TAGSSC
Trigger: GCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCT...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGAGCGTGTCCCGGAGTaGCTGGCTCAGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLERVPE*LAQHEG
Trigger: ACCTTCGTGCTGAGCCAGGCACTCCGGGACACGCTC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTATCAGCTCTTCAGTCTaGTTCATGCGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIISSSV*FMRPTS
Trigger: TGAGGTGGGGCGCATGAAGCAGACTGAAGAGCTGAT...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSLIHSY*CGFRRP
Trigger: CGGCCGCCTGAACCCACAGCAATAAGAATGAATGAG...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSSVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATCTCTCATCCCCTGGGTaGCAAGCCACACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHLSSPG*QATPST
Trigger: TGTGCTGGGTGTGGCTTGGCACCCAGGGGATGAGAG...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGTCCCTTGGGCTCCTCTaGCAGGCCGTTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWSLGLL*QAVGCS
Trigger: GGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGA...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTAAGCAAAGAGCCCAGTaGCTGTTGGGGATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRKQRAQ*LLGIVV
Trigger: AACTACAATCCCCAACAGGCACTGGGCTCTTTGCTT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGGGAGGCTTGAGGAGTaGCAGGAGTTTGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHGRLEE*QEFALS
Trigger: GCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGACTGTCCCCTGTTTaGATTCCATCTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGLSPV*IPSSES
Trigger: GCTTTCTGAAGATGGAATCCAAACAGGGGACAGTCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGTGTCCCGGAGTGCCTaGCTCAGCACGAAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLVSRSA*LSTKVS
Trigger: CGACACCTTCGTGCTGAGCCAGGCACTCCGGGACAC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTCACAAGTCGCTGATGTaGGGGGAAGAGCGCACACGG +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAHKSLM*GEERTR
Trigger: CCGTGTGCGCTCTTCCCCCCACATCAGCGACTTGTG...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGGGATCCGGAACCTGCTaGGCCTGGACCAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWGSGTC*AWTRER
Trigger: TCGCTCCCTGGTCCAGGCCCAGCAGGTTCCGGATCC...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAGGATCCGGAACCTGCTaGGCCTGGACCAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERIGSGTC*AWTRER
Trigger: TCGCTCCCTGGTCCAGGCCCAGCAGGTTCCGGATCC...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCTGGGTGGGGCGGCCCTaGTGGTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILWVGRP*WLLRRE
Trigger: CTCCCTTCTCAGCAACCACCAGGGCCGCCCCACCCA...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTTTGGGGGCAGCCCTaGACTCCAGACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHVWGQP*TPDSVL
Trigger: AAGGACGGAGTCTGGAGTCCAGGGCTGCCCCCAAAC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGCCTCGAGAAGCCTCTaGTTCTGGCGAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAASRSL*FWRRCL
Trigger: GAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGC...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALQLSTH*LLCTKP
Trigger: AGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPKQGDY*SLGSRS
Trigger: TGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTT...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCCTGGAAGAGAAGAACTaGCTTGAGAGGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPLEEKN*LERAQE
Trigger: TTCCTGTGCCCTCTCAAGCCAGTTCTTCTCTTCCAG...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGCACTCAGTCATTTGTaGGTCAGGAGCACAATCACC +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPALSHL*VRSTIT
Trigger: GGTGATTGTGCTCCTGACCCACAAATGACTGAGTGC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTAAGGCTGAGGCTGGCTaGTGGATTATAGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRKAEAG*WIIVQV
Trigger: AACTTGAACTATAATCCACCAGCCAGCCTCAGCCTT...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATAGCAGATGCTCTGGATaGGGTTGGGCAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHSRCSG*GWAATP
Trigger: GGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCT...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTTATCATGCGAGGCACTaGCTCATCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSYHARH*LIWKQM
Trigger: CATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATA...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGAGTCTCCAATGTCATaGACATGCCAAATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPESPMS*TCQMPV
Trigger: CACTGGCATTTGGCATGTCCATGACATTGGAGACTC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCGCTGGAGGAGTATTCTaGGGAGCTTCATCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLAGGVF*GASSGL
Trigger: CAGTCCTGATGAAGCTCCTCAGAATACTCCTCCAGC...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGTTCTGGGCATTCTCCTaGCGGCTGGACCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKFWAFS*RLDPSS
Trigger: AGAAGAGGGGTCCAGCCGTCAGGAGAATGCCCAGAA...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGCAGGCAAAGAGGGGTaGAGCGGGGGCGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAAGKEG*SGGARQ
Trigger: TTGCCTCGCGCCCCCGCTTCACCCCTCTTTGCCTGC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATTGCCCACTCTTAGGCTaGGTGATGAGCAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHCPLLG*VMSSRS
Trigger: CGACCTGCTGCTCATCACTCAGCCTAAGAGTGGGCA...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTTTGGCTGCTCTGTCCTaGAGCTCGATCTCTATGGTT +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNILAALS*SSISMV
Trigger: AACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAA...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGCAAGTTGCTGTGCCTaGGCTGAAGGGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPASCCA*AEGEAS
Trigger: CGAGGCCTCCCCTTCAGCTCAGGCACAGCAACTTGC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTACTCCTGCAGTCAGGGTaGCAGTGTCAGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLLLQSG*QCQSWA
Trigger: TGCCCAGGACTGACACTGTCACCCTGACTGCAGGAG...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTTCAGCCTGTCCTGTCTaGCCCTTGGAGCGAGGAATG +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLASACPV*PLERGM
Trigger: CATTCCTCGCTCCAAGGGGCAGACAGGACAGGCTGA...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361926.8
CDS-3UTR GCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCCCTCCCCTCCACAGTTaGTGGAGGAGTATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSPPLHS*WRSILR
Trigger: CCTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGG...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTTGCATCTCCAGCATTTaGTGGAGAAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNICISSI*WRRTPI
Trigger: GATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCA...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLALFSP*HTGRCL
Trigger: GAGACACCTACCAGTGTGGCACGGAGAGAACAAAGC...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALAVFIG*SVLKLD
Trigger: ATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGC...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGAGGACCAGTCATTGCTaGAGAAACAAGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALRTSHC*RNKQGD
Trigger: GTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCT...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAACTCTCATCCCCTGGGTaGCAAGCCACACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPELSSPG*QATPST
Trigger: TGTGCTGGGTGTGGCTTGGCACCCAGGGGATGAGAG...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCTCAAGTTGGGAGATCTaGAGGCAGGAATTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFSSWEI*RQELWR
Trigger: CCTCCATAATTCCTGCCTGCAGATCTCCCAACTTGA...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCCCAATGTCATGGACATaGCAAATGCCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFPMSWT*QMPVLF
Trigger: GAAGAGCACTGGCATTTGGCATGTCCATGACATTGG...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTCCAATGTCATGGACATaGCAAATGCCAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSPMSWT*QMPVLF
Trigger: GAAGAGCACTGGCATTTGGCATGTCCATGACATTGG...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGGGTTGGTGCATCATTaGAGTTTCGGGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFGLVHH*SFGVVL
Trigger: AAGAACTACCCCGAAACTCCAATGATGCACCAACCC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTATCCAGAAGACCGCTaGCTTGCACAGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSYPEDR*LAQPEA
Trigger: AGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATA...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGGTGTCCCGGAGTGCCTaGCTCAGCACGAAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWVSRSA*LSTKVS
Trigger: CGACACCTTCGTGCTGAGCCAGGCACTCCGGGACAC...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGTTTGGGGGCAGCCCTaGACTCCAGACTCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLVWGQP*TPDSVL
Trigger: AAGGACGGAGTCTGGAGTCCAGGGCTGCCCCCAAAC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAGCCTCGAGAAGCCTCTaGTTCTGGCGAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEASRSL*FWRRCL
Trigger: GAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGC...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTTCATTCTTATTGCTGTaGGTTCAGGCGGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSSFLLL*VQAAVF
Trigger: GAAAACGGCCGCCTGAACCCACAGCAATAAGAATGA...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNISLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCCAGCACAGTCTCTTCTaGAGCTCAGACTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPQHSLF*SSDLAS
Trigger: AGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTG...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCACCTCTGCCAGGCCGTTaGCTGCTCCATAACATTGCC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPPLPGR*LLHNIA
Trigger: GGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGG...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGTGCTCTGGATGGGGTTaGGCAGCCACACCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWCSGWG*AATPAL
Trigger: GAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCA...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATTGGAAGCAGATGCTCTaGATGGGGTTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHWKQML*MGLGSH
Trigger: GTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCA...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCACCATTTTCTTTGGCTaGTTGGCTTCCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPTIFFG*LASCSF
Trigger: GAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGT...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGGCCCAGTGTTTCTGTaGGAGGATCAGGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPGPVFL*EDQDKG
Trigger: GCCTTTGTCCTGATCCTCTCACAGAAACACTGGGCC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCATTGCTGTGCCTGAGCTaGAGGGGAGGCCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAALLCLS*RGGLVP
Trigger: CGGGACGAGGCCTCCCCTTCAGCTCAGGCACAGCAA...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCACTCCCCATTCACATCTaGTCTCGCTTGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPLPIHI*SRLETW
Trigger: CCAGGTCTCCAAGCGAGAGCAGATGTGAATGGGGAG...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGAGCGTGTCCCGGAGTaGCTGGCTCAGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRERVPE*LAQHEG
Trigger: ACCTTCGTGCTGAGCCAGGCACTCCGGGACACGCTC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTTCAGTCTGCTTCATaGGCCCCACCTCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWLQSAS*APPQRC
Trigger: GCAGCGCTGAGGTGGGGCGCATGAAGCAGACTGAAG...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGAGGCCCTTTTTCAACTaGCATGACCTAGATTTGTCT +
Preference number: 4 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWRPFFN*HDLDLS
Trigger: AGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCT...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGTCCATAACATTGCCCTaGAACTGCCACAGAACCCTA +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALSITLP*NCHRTL
Trigger: TAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGA...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCATCCCTTGGGCTCCTCTaGCAGGCCGTTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAASLGLL*QAVGCS
Trigger: GGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGA...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGAGTGAGGTGCTCTGCTaGAGTCATCCCCTTTATCTT +
Preference number: 4 (lower is better)
Translates to: SPPLVSCEALAHLEADALSEVLC*SHPLYL
Trigger: AAGATAAAGGGGATGACTCCAGCAGAGCACCTCACT...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361926.8
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATCTGCCTGACACGAGTTaGTTTGGGAGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHLPDTS*FGRLEE
Trigger: CTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAG...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGAGGTCCAGGGGGTCGTaGGAAGGTGGGTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQRSRGS*EGGCIS
Trigger: GGAGATGCACCCACCTTCCCACGACCCCCTGGACCT...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGACCCCTCTTCTGTCTaGCGCAGGATATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPDPSSV*RRIFCS
Trigger: GCTGCAGAATATCCTGCGCCAGACAGAAGAGGGGTC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGGGTAGGGGGTCCAGATaGATCCGGAACCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQGRGSR*IRNLLG
Trigger: GCCCAGCAGGTTCCGGATCCATCTGGACCCCCTACC...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGATAGGGAAGAAGCTTaGAGTAGTCGGTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHDREEA*SSRWVG
Trigger: CCCCACCCACCGACTACTCCAAGCTTCTTCCCTATC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNIEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGGAAGCATCCAGGAATaGAAACTAGTATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRGSIQE*KLVFPR
Trigger: TCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTACCTCTGCCAGGCCGTTaGCTGCTCCATAACATTGCC +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLPLPGR*LLHNIA
Trigger: GGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGG...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCATCAGGACCCAGCTACTaGCCATCTTCAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPSGPSY*PSSVPW
Trigger: CCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTGCTCTGGATGGGGTTaGGCAGCCACACCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQCSGWG*AATPAL
Trigger: GAGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCA...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCTATCATGCGAGGCACTaGCTCATCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLYHARH*LIWKQM
Trigger: CATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATA...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCGTCCCTCGCCTCCTCTaGTATCATGCGAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILVPRLL*YHARHW
Trigger: CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGAC...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGTCCCTCGCCTCCTCTaGTATCATGCGAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPVPRLL*YHARHW
Trigger: CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGAC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCAGGACAACGGCAGGGTaGCCGATGCTTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEARTTAG*PMLGGW
Trigger: CCACCCTCCAAGCATCGGTCACCCTGCCGTTGTCCT...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGTGGTGGCATCCTGCCTaGCACGAGTTGGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWWWHPA*HELVWE
Trigger: CTCCCAAACCAACTCGTGTCAGGCAGGATGCCACCA...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGCTAGAAACCGCTCGCTaGCTCCCTGGACTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQLETAR*LPGLAA
Trigger: TGCAGCGAGTCCAGGGAGTCAGCGAGCGGTTTCTAG...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCGCAGGCAAAGAGGGGTaGAGCGGGGGCGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFAGKEG*SGGARQ
Trigger: TTGCCTCGCGCCCCCGCTTCACCCCTCTTTGCCTGC...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTAGTGAATCCAATGGATaGATGGGCTTTGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSVPWAPLPGRWLLHNISESNG*MGFVLS
Trigger: GGAGAGAACAAAGCCCATTCATCCATTGGATTCACT...AATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCTTTTTCAACTGCCATaGCCTAGATTTGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRLFQLP*PRFVFL
Trigger: AAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCGACTTTATCTCCAATaGGGCCCTTTTTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLRLYLQ*GPFSTA
Trigger: GGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCGTGCTCTTCGCCCTCTaGGTCTCCCGGAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEAVLFAL*VSRSPC
Trigger: ACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCAC...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGCACATTGGGGTTGGTaGATCATTGGAGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAAHWGW*IIGVSG
Trigger: CCCCGAAACTCCAATGATGCACCAACCCCAATGTGC...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTATCGTGGGAAGGTGGGTaGATCTCCAGCATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLSWEGG*ISSICW
Trigger: CCAGCAAATGCTGGAGATGCACCCACCTTCCCACGA...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGAGCGTGTCCCGGAGTaGCTGGCTCAGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAERVPE*LAQHEG
Trigger: ACCTTCGTGCTGAGCCAGGCACTCCGGGACACGCTC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAACTCCCTGGACTCGCTaGACATTGGAGAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPTPWTR*TLEKSV
Trigger: CACACTCTTCTCCAATGTGCAGCGAGTCCAGGGAGT...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHALFSP*HTGRCL
Trigger: GAGACACCTACCAGTGTGGCACGGAGAGAACAAAGC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPETLPCN*HRTLAS
Trigger: GGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGT...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCTCAAGTTGGGAGATCTaGAGGCAGGAATTATGGAGG +
Preference number: 4 (lower is better)
Translates to: SLALSIAGILIGHRLSQLSSWEI*RQELWR
Trigger: CCTCCATAATTCCTGCCTGCAGATCTCCCAACTTGA...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGGTGCACATTGGGGTTaGTGCATCATTGGAGTTTCG +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSGAHWG*CIIGVS
Trigger: CGAAACTCCAATGATGCACCAACCCCAATGTGCACC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTATATCCAGAAGACCGCTaGCTTGCACAGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLYPEDR*LAQPEA
Trigger: AGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATA...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGGACTCGCTGCACATTaGAGAAGAGTGTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSGLAAH*RRVCGD
Trigger: ATCACCACACACTCTTCTCCAATGTGCAGCGAGTCC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTAGGAGTAGTCGGTGGGTaGGGCGGCCCTGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLGVVGG*GGPGGC
Trigger: GCAACCACCAGGGCCGCCCCACCCACCGACTACTCC...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEGGRFH*LLCPEA
Trigger: AGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCC...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGGAAGCATCCAGGAATaGAAACTAGTATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSGSIQE*KLVFPR
Trigger: TCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGCACTCAGTCATTTGTaGGTCAGGAGCACAATCACC +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSALSHL*VRSTIT
Trigger: GGTGATTGTGCTCCTGACCCACAAATGACTGAGTGC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCTCAGGGCTCTGATTATAGTTCAAGTTaGGAGATCTGCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCNCHRTLASKRPKAQGSDYSSS*EICRQE
Trigger: TTCCTGCCTGCAGATCTCCCAACTTGAACTATAATC...AGAGCCCTGAGCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGCTGAGGCTGGCTGGTaGATTATAGTTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSAEAGW*IIVQVG
Trigger: CCCAACTTGAACTATAATCCACCAGCCAGCCTCAGC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTTTGGTTTGGGAGGCTTaGGGAGTGGCAGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPLVWEA*GVAGVC
Trigger: GCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAA...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCCGACTTTATCTCCAATaGGGCCCTTTTTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: HNIALQLPQNPSLQETQSRLYLQ*GPFSTA
Trigger: GGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCG...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTACAGAAACAAGCAGGGTaGCTACTGGTCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLQKQAG*LLVSWV
Trigger: GACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTG...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGGCCCAGTGTTTCTGTaGGAGGATCAGGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPGPVFL*EDQDKG
Trigger: GCCTTTGTCCTGATCCTCTCACAGAAACACTGGGCC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTTGCTGTGCCTGAGCTaGAGGGGAGGCCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFLLCLS*RGGLVP
Trigger: CGGGACGAGGCCTCCCCTTCAGCTCAGGCACAGCAA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATACCCAGAAGATGGGGGTaGACATTGGGGTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERIPRRWG*TLGLVH
Trigger: ATGCACCAACCCCAATGTGCACCCCCATCTTCTGGG...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATCCAGCCTCCGCACAGTaGCAGGAGCTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNPASAQ*QELRQS
Trigger: GCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGG...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGGAGTGGCAGGAGTTTaGGCTCAGCAGTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAGVAGV*AQQWSG
Trigger: ACCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGGCAGCTCCCAATTCTaGTCCTTCAGCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPGSSQF*SFSTSS
Trigger: GCTAGAGGTGCTGAAGGAGCAGAATTGGGAGCTGCC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAATACAGAGGTTCATCCTaGAGGGGCAGCTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEYRGSS*RGSSQF
Trigger: GAATTGGGAGCTGCCCCTGCAGGATGAACCTCTGTA...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGTCGTGGGAAGGTGGGTaGATCTCCAGCATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWSWEGG*ISSICW
Trigger: CCAGCAAATGCTGGAGATGCACCCACCTTCCCACGA...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGGCTCCCAGCCAGCGCTaGATGTCTGATAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWAPSQR*MSDREE
Trigger: TTCTTCCCTATCAGACATGCAGCGCTGGCTGGGAGC...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKSVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGACAGGACCAGTCATTaGTGCAGAAACAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKDRTSH*CRNKQG
Trigger: ACCCTGCTTGTTTCTGCAGCAATGACTGGTCCTGTC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGTGCCAGGCCGTTGGCTaGTCCATAACATTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRCQAVG*SITLPC
Trigger: GCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCA...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTGCCAGGCCGTTGGCTaGTCCATAACATTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQCQAVG*SITLPC
Trigger: GCAGGGCAATGTTATGGAGCAGCCAACGGCCTGGCA...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCTGCCTGACACGAGTTaGTTTGGGAGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPLPDTS*FGRLEE
Trigger: CTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCCTGCCTGACACGAGTTaGTTTGGGAGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILLPDTS*FGRLEE
Trigger: CTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAG...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCGACCCCTCTTCTGTCTaGCGCAGGATATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILDPSSV*RRIFCS
Trigger: GCTGCAGAATATCCTGCGCCAGACAGAAGAGGGGTC...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGTGGAAGCGCAGCCTTTaGGTGAGCCGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRWKRSL*VSRISS
Trigger: AGAGCTGATCCGGCTCACCCAAAGGCTGCGCTTCCA...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCAGGGCCTTGACTTTGTaGAAGCGCAGCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILRALTL*KRSLWV
Trigger: CACCCAAAGGCTGCGCTTCCACAAAGTCAAGGCCCT...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGGAACCTGCTGGGCCTaGACCAGGGAGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNGTCWA*TRERWA
Trigger: TGCCCATCGCTCCCTGGTCCAGGCCCAGCAGGTTCC...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGTGGGGCGGCCCTGGTaGTTGCTGAGAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNVGRPW*LLRRER
Trigger: CCTCTCCCTTCTCAGCAACCACCAGGGCCGCCCCAC...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGGCGGCCGTTTTCATTaGCTGCTCTGTCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPGGRFH*LLCPEA
Trigger: AGCTTCAGGACAGAGCAGCCAATGAAAACGGCCGCC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHKQGDY*SLGSRS
Trigger: TGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTT...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTCCTCTGCCAGGCCGTTaGCTGCTCCATAACATTGCC +
Preference number: 4 (lower is better)
Translates to: VSIGHTFKASSFILIAVGPLPGR*LLHNIA
Trigger: GGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGG...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTTCAGGACCCAGCTACTaGCCATCTTCAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPSGPSY*PSSVPW
Trigger: CCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTATGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLCRQEL*RPVFGA
Trigger: TGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCA...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGCTGAGGCTGGCTGGTaGATTATAGTTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKAEAGW*IIVQVG
Trigger: CCCAACTTGAACTATAATCCACCAGCCAGCCTCAGC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCAGGAGGTTCACTGGCTaGCCTGTGGTCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEARRFTG*PVVHSS
Trigger: GGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCT...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp TCTCCACTGACAGTGAATCCAATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPLTVNPMDEWA*FSPCHTGRCLP
Trigger: TGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCATTGGATTCACTGTCAGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAGCTGGAGGAGTATTCTaGGGAGCTTCATCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERIAGGVF*GASSGL
Trigger: CAGTCCTGATGAAGCTCCTCAGAATACTCCTCCAGC...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCAGGTGCAGACGACTCTaGACACAGTTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILRCRRL*TQFLGT
Trigger: TGTTCCCAGGAACTGTGTTCAGAGTCGTCTGCACCT...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTCGACTTTATCTCCAATaGGGCCCTTTTTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLARLYLQ*GPFSTA
Trigger: GGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCG...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGGCCCAGTGTTTCTGTaGGAGGATCAGGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRGPVFL*EDQDKG
Trigger: GCCTTTGTCCTGATCCTCTCACAGAAACACTGGGCC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCGTGCTCTTCGCCCTCTaGGTCTCCCGGAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFVLFAL*VSRSPC
Trigger: ACAGGGACTCCGGGAGACTCAGAGGGCGAAGAGCAC...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATAAAATGGTGGCATCCTaGCTGACACGAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHKMVAS*LTRVGL
Trigger: CAAACCAACTCGTGTCAGGCAGGATGCCACCATTTT...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTGGCAGCTCCCAATTCTaGTCCTTCAGCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VSIGHTFKASSFILIAVGGSSQF*SFSTSS
Trigger: GCTAGAGGTGCTGAAGGAGCAGAATTGGGAGCTGCC...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCACCCACAGCGTGGGCATaGACCACATCACACAAGTCG +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAPTAWA*TTSHKS
Trigger: CGACTTGTGTGATGTGGTGCATGCCCACGCTGTGGG...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACACTTAGGGAGGCTCTaGAGCCGGCGCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIHLGRL*SRRSSA
Trigger: CGCCGAGCTGCGCCGGCTGCAGAGCCTCCCTAAGTG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTACCCATTGGCTGCTCTaGACTAAGCCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPTHWLL*TKPLSP
Trigger: TGGAGACAGAGGCTTAGTGCAGAGCAGCCAATGGGT...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGACAGGACCAGTCATTaGTGCAGAAACAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLDRTSH*CRNKQG
Trigger: ACCCTGCTTGTTTCTGCAGCAATGACTGGTCCTGTC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCCATGCCAAATGCCAGTaGTCTTCGCCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILHAKCQ*SSPSES
Trigger: AGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATG...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATACATGGACATGCCAAATaGCAGTGCTCTTCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERIHGHAK*QCSSPS
Trigger: AGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATG...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACCGATGCTTGGAGGGTaGGGGCGGGAGCGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIPMLGG*GREREV
Trigger: GACCTCTCGCTCCCGCCCCCACCCTCCAAGCATCGG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGGACTGTCCCCTGTTTaGATTCCATCTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKGLSPV*IPSSES
Trigger: GCTTTCTGAAGATGGAATCCAAACAGGGGACAGTCC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTAGTGTCCCGGAGTGCCTaGCTCAGCACGAAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLVSRSA*LSTKVS
Trigger: CGACACCTTCGTGCTGAGCCAGGCACTCCGGGACAC...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGTCCGTCCTTCAGTCTTaGCAGGTGCAGACGACTCTG +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRSVLQS*QVQTTL
Trigger: CAGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGA...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTAGAAGCCTCTGGTTCTaGCGAAGGTGCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSIGHTFKASSFILIAVGRSLWF*RRCLLL
Trigger: AAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCT...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAAGCCTCTGTCTCCATTaGCCACACATTCAAGGCATC +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPESLCLH*PHIQGI
Trigger: GATGCCTTGAATGTGTGGCCAATGGAGACAGAGGCT...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCT +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPQLSTH*LLCTKP
Trigger: AGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGTCAGGACCCAGCTACTaGCCATCTTCAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRSGPSY*PSSVPW
Trigger: CCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATATGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERICRQEL*RPVFGA
Trigger: TGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCA...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GAAACAAGCAGGGTGACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGAGGCACTGGCTCATCTaGAAGCAGATGCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ETSRVTTGLLGPDHHFLWRHWLI*KQMLWM
Trigger: CATCCAGAGCATCTGCTTCCAGATGAGCCAGTGCCT...CCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGGAGTCTCCAATGTCATaGACATGCCAAATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKESPMS*TCQMPV
Trigger: CACTGGCATTTGGCATGTCCATGACATTGGAGACTC...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp TTGGCCACACATTCAAGGCATCCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LATHSRHPHSFL*LWVQAAVFIGC
Trigger: GCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTATGGAGCGGTAGGATGTaGGGACAACGGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLWSGRM*GQRQGD
Trigger: GTCACCCTGCCGTTGTCCTCACATCCTACCGCTCCA...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR TCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATGAATTCCAGGCGCCGTaGCCAGGAGACCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHEFQAP*PGDQGQ
Trigger: CTGCCCCTGGTCTCCTGGTCACGGCGCCTGGAATTC...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTTTGGCTGCTCTGTCCTaGAGCTCGATCTCTATGGTT +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPLAALS*SSISMV
Trigger: AACCATAGAGATCGAGCTTCAGGACAGAGCAGCCAA...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCCAAAGCTCAAGGCTaGGGCTGGCTGGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: VSIGHTFKASSFILIAVGSKAQG*GWLVDY
Trigger: ATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGA...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTGCACCACTATTTACTaGGGGTTCCCCACACGTCAG +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQCTTIY*GFPTRQ
Trigger: CTGACGTGTGGGGAACCCTCAGTAAATAGTGGTGCA...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCCCAGAAGATGGGGGTaGACATTGGGGTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEAPRRWG*TLGLVH
Trigger: ATGCACCAACCCCAATGTGCACCCCCATCTTCTGGG...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAAAAATGGTGGCATCCTaGCTGACACGAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEKMVAS*LTRVGL
Trigger: CAAACCAACTCGTGTCAGGCAGGATGCCACCATTTT...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTACAGAGGTTCATCCTaGAGGGGCAGCTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: VSIGHTFKASSFILIAVGYRGSS*RGSSQF
Trigger: GAATTGGGAGCTGCCCCTGCAGGATGAACCTCTGTA...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCACAGCCGGAAGCTCCTaGCACAGGGTGTTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFTAGSS*HRVLRG
Trigger: ACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGT...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCACATTGCCCTGCAACTaGCACAGAACCCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEATLPCN*HRTLAS
Trigger: GGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGT...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCACCTCCTCTGGTATCATaGGAGGCACTGGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAPPLVS*EALAHL
Trigger: CAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGG...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGCATGGACATGCCAAATaGCAGTGCTCTTCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRHGHAK*QCSSPS
Trigger: AGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATG...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTATGCATGCGCCTCTCCTaGGGGCTGAGGGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLCMRLS*GLRVSR
Trigger: TCTGGATACCCTCAGCCCCCAGGAGAGGCGCATGCA...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGGAACCTGCTGGGCCTaGACCAGGGAGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIGTCWA*TRERWA
Trigger: TGCCCATCGCTCCCTGGTCCAGGCCCAGCAGGTTCC...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGTGGGGCGGCCCTGGTaGTTGCTGAGAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIVGRPW*LLRRER
Trigger: CCTCTCCCTTCTCAGCAACCACCAGGGCCGCCCCAC...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATTGGGTGGGGCGGCCCTaGTGGTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHWVGRP*WLLRRE
Trigger: CTCCCTTCTCAGCAACCACCAGGGCCGCCCCACCCA...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGATAGGGAAGAAGCTTaGAGTAGTCGGTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAADREEA*SSRWVG
Trigger: CCCCACCCACCGACTACTCCAAGCTTCTTCCCTATC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATACTGGAAGAGAAGAACTaGCTTGAGAGGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERILEEKN*LERAQE
Trigger: TTCCTGTGCCCTCTCAAGCCAGTTCTTCTCTTCCAG...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATCCATCTTCAGTCCCTTaGGCTCCTCTGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNPSSVP*APLPGR
Trigger: ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGG...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAGCTGAGGCTGGCTGGTaGATTATAGTTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERIAEAGW*IIVQVG
Trigger: CCCAACTTGAACTATAATCCACCAGCCAGCCTCAGC...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAGCAGATGCTCTGGATaGGGTTGGGCAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFSRCSG*GWAATP
Trigger: GGGTGTGGCTGCCCAACCCCATCCAGAGCATCTGCT...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCTATCATGCGAGGCACTaGCTCATCTGGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: NCHDLDLSSLALSIAGILYHARH*LIWKQM
Trigger: CATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATA...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTaGGCTGATTGGCTTCCTGCTCATTCCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DYWSLGSRSPFS*ADWLPAHSCSQ
Trigger: TTGGGAACAGGAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp ATTGCTGCAGAAACAAGCAGGGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTTCTTTGGCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: IAAETSRVTTGL*GPDHHFLWLIG
Trigger: GCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTTGTTTCTGCAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTTCTGGGCATTCTCCTaGCGGCTGGACCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFFWAFS*RLDPSS
Trigger: AGAAGAGGGGTCCAGCCGTCAGGAGAATGCCCAGAA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTGCCCACTCTTAGGCTaGGTGATGAGCAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFCPLLG*VMSSRS
Trigger: CGACCTGCTGCTCATCACTCAGCCTAAGAGTGGGCA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCTCCAAAGCTCAAGGCTaGGGCTGGCTGGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEASKAQG*GWLVDY
Trigger: ATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGA...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATGCAAGTTGCTGTGCCTaGGCTGAAGGGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHASCCA*AEGEAS
Trigger: CGAGGCCTCCCCTTCAGCTCAGGCACAGCAACTTGC...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGAGGAGTGAGGTGCTCTaGTGGAGTCATCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQRSEVL*WSHPLY
Trigger: ATAAAGGGGATGACTCCAGCAGAGCACCTCACTCCT...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361926.8
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAATCAGCTCTTCAGTCTaGTTCATGCGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAISSSV*FMRPTS
Trigger: TGAGGTGGGGCGCATGAAGCAGACTGAAGAGCTGAT...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGCTTTGTTCTCTCCGTaGCACACTGGTAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAALFSP*HTGRCL
Trigger: GAGACACCTACCAGTGTGGCACGGAGAGAACAAAGC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGCTCATTCATTCTTATTaGTGTGGGTTCAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQLIHSY*CGFRRP
Trigger: CGGCCGCCTGAACCCACAGCAATAAGAATGAATGAG...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATATCAAGTTGGGAGATCTaGAGGCAGGAATTATGGAGG +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERISSWEI*RQELWR
Trigger: CCTCCATAATTCCTGCCTGCAGATCTCCCAACTTGA...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCATGCCAAATGCCAGTaGTCTTCGCCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEAHAKCQ*SSPSES
Trigger: AGACTCAGAGGGCGAAGAGCACTGGCATTTGGCATG...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGGTGCACATTGGGGTTaGTGCATCATTGGAGTTTCG +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRGAHWG*CIIGVS
Trigger: CGAAACTCCAATGATGCACCAACCCCAATGTGCACC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGGGACTCGCTGCACATTaGAGAAGAGTGTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQGLAAH*RRVCGD
Trigger: ATCACCACACACTCTTCTCCAATGTGCAGCGAGTCC...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAAAGGCCCCACAGCGTaGGCATGCACCACATCACAC +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFKGPTA*ACTTSH
Trigger: GTGTGATGTGGTGCATGCCCACGCTGTGGGGCCTTT...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCACACAGTCCTCATAGATaGTGTCTGGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAHSPHR*CLGSRE
Trigger: TTCCCTGCTCCCCAGACACCATCTATGAGGACTGTG...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGAAGCAGGGTGACTACTaGTCTCTTGGGTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRKQGDY*SLGSRS
Trigger: TGATCTGGACCCAAGAGACCAGTAGTCACCCTGCTT...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGCCCAGGAGGTTCACTaGCTGGCCTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIAQEVH*LACGPQ
Trigger: CTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGC...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATTTGGTTTGGGAGGCTTaGGGAGTGGCAGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNLVWEA*GVAGVC
Trigger: GCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAA...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAAGCGCAGCCTTTGGGTaGGCCGGATCAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHISAAFG*AGSALQ
Trigger: CTGAAGAGCTGATCCGGCTCACCCAAAGGCTGCGCT...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATTTTCGTGTTCCCCTGTaGCTTCACACACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNFRVPL*LHTPAG
Trigger: CCCAGCTGGTGTGTGAAGTCACAGGGGAACACGAAA...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAAGTGAATCCAATGGATaGATGGGCTTTGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERISESNG*MGFVLS
Trigger: GGAGAGAACAAAGCCCATTCATCCATTGGATTCACT...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCACTTTTTCAACTGCCATaGCCTAGATTTGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLCPEARSLWLPREVVSPLFQLP*PRFVFL
Trigger: AAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAG...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAACCATTTTCTTTGGCTaGTTGGCTTCCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: TQHSLFWSSDLASFLERITIFFG*LASCSF
Trigger: GAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGT...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTACTCCCCATTCACATCTaGTCTCGCTTGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLLPIHI*SRLETW
Trigger: CCAGGTCTCCAAGCGAGAGCAGATGTGAATGGGGAG...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACCTTCAGGGGTCTTGTaGAGGTGTTTGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIPSGVL*RCLGAA
Trigger: GGCTGCCCCCAAACACCTGCACAAGACCCCTGAAGG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCCATAACATTGCCCTaGAACTGCCACAGAACCCTA +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQSITLP*NCHRTL
Trigger: TAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGA...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCCCTCCTCTGGTATCATaGGAGGCACTGGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFPPLVS*EALAHL
Trigger: CAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGG...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTCCGTCCTTCAGTCTTaGCAGGTGCAGACGACTCTG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFSVLQS*QVQTTL
Trigger: CAGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATAGAAGCCTCTGGTTCTaGCGAAGGTGCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNRSLWF*RRCLLL
Trigger: AAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCT...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCGCACTCAGTCATTTGTaGGTCAGGAGCACAATCACC +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEAALSHL*VRSTIT
Trigger: GGTGATTGTGCTCCTGACCCACAAATGACTGAGTGC...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAAGGAGGTTCACTGGCTaGCCTGTGGTCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIRRFTG*PVVHSS
Trigger: GGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCT...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
3UTR CAA 72 bp CCCTTTTTCAACTGCCATGACCTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGAATACTCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PFFNCHDLDLSS*ALSIAGILIGH
Trigger: ATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCGCTGGAGGAGTATTCTaGGGAGCTTCATCAGGACTG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFAGGVF*GASSGL
Trigger: CAGTCCTGATGAAGCTCCTCAGAATACTCCTCCAGC...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAGGTGCAGACGACTCTaGACACAGTTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFRCRRL*TQFLGT
Trigger: TGTTCCCAGGAACTGTGTTCAGAGTCGTCTGCACCT...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGACCATTTTCTTTGGCTaGTTGGCTTCCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQTIFFG*LASCSF
Trigger: GAATGAGCAGGAAGCCAATCAGCCAAAGAAAATGGT...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATTGCACCACTATTTACTaGGGGTTCCCCACACGTCAG +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNCTTIY*GFPTRQ
Trigger: CTGACGTGTGGGGAACCCTCAGTAAATAGTGGTGCA...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATTTCAAAGGAGTGAGGTaGTCTGCTGGAGTCATCCCC +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNFKGVR*SAGVIP
Trigger: GGGGATGACTCCAGCAGAGCACCTCACTCCTTTGAA...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR GCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTAACTCCCTGGACTCGCTaGACATTGGAGAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLTPWTR*TLEKSV
Trigger: CACACTCTTCTCCAATGTGCAGCGAGTCCAGGGAGT...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTAATCAGCTCTTCAGTCTaGTTCATGCGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLISSSV*FMRPTS
Trigger: TGAGGTGGGGCGCATGAAGCAGACTGAAGAGCTGAT...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGGTTACTATAAAAACTaGAACTCTCTTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLGYYKN*NSLQHQ
Trigger: CTGGTGCTGAAGAGAGTTGCAGTTTTTATAGTAACC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGAAGCTCGATCTCTATaGTTGCCACGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GMETSISQTQKTGPVIAAEARSL*LPREVV
Trigger: TACTACCTCTCGTGGCAACCATAGAGATCGAGCTTC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATCAGCTCAGTACCCATTaGCTGCTCTGCACTAAGCCT +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNQLSTH*LLCTKP
Trigger: AGGCTTAGTGCAGAGCAGCCAATGGGTACTGAGCTG...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGAAGGCTGAGGCTGGCTaGTGGATTATAGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQKAEAG*WIIVQV
Trigger: AACTTGAACTATAATCCACCAGCCAGCCTCAGCCTT...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATATCACTGGCTGGCCTGTaGTCCACAGCTCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHISLAGL*STAPVS
Trigger: AGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGA...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATTGGAAGCAGATGCTCTaGATGGGGTTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHWKQML*MGLGSH
Trigger: GTGGCTGCCCAACCCCATCCAGAGCATCTGCTTCCA...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATATTTCGTGTTCCCCTGTaGCTTCACACACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIFRVPL*LHTPAG
Trigger: CCCAGCTGGTGTGTGAAGTCACAGGGGAACACGAAA...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTGCATCTCCAGCATTTaGTGGAGAAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFCISSI*WRRTPI
Trigger: GATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATATGGTTCTGGCGAAGGTaGCTCCTCCTTTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIWFWRR*LLLSCS
Trigger: GGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCA...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGCCGTTTTCATTGGCTaGTCTGTCCTGAAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNAVFIG*SVLKLD
Trigger: ATCGAGCTTCAGGACAGAGCAGCCAATGAAAACGGC...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCTCAGTACCCATTGGCTaGTCTGCACTAAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFSVPIG*SALSLC
Trigger: ACAGAGGCTTAGTGCAGAGCAGCCAATGGGTACTGA...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGAGGCCCTTTTTCAACTaGCATGACCTAGATTTGTCT +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRRPFFN*HDLDLS
Trigger: AGACAAATCTAGGTCATGGCAGTTGAAAAAGGGCCT...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACCCCTCCACAGTTGCTaGAGGAGTATTCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIPLHSC*RSILRS
Trigger: GCTCCTCAGAATACTCCTCCAGCAACTGTGGAGGGG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATCCCCTCCACAGTTGCTaGAGGAGTATTCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHPLHSC*RSILRS
Trigger: GCTCCTCAGAATACTCCTCCAGCAACTGTGGAGGGG...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGGGCCTTGACTTTGTaGAAGCGCAGCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHRALTL*KRSLWV
Trigger: CACCCAAAGGCTGCGCTTCCACAAAGTCAAGGCCCT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGGGAAGCATCCAGGAATaGAAACTAGTATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRGSIQE*KLVFPR
Trigger: TCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCAAGGCTGAGGCTGGCTaGTGGATTATAGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: SCSFLFPILSYDFISNEAKAEAG*WIIVQV
Trigger: AACTTGAACTATAATCCACCAGCCAGCCTCAGCCTT...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGGTGCAGACGACTCTaGACACAGTTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHRCRRL*TQFLGT
Trigger: TGTTCCCAGGAACTGTGTTCAGAGTCGTCTGCACCT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGCTTTTTCAACTGCCATaGCCTAGATTTGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQLFQLP*PRFVFL
Trigger: AAGGAAGACAAATCTAGGTCATGGCAGTTGAAAAAG...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR TCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATTCCAAAGCTCAAGGCTaGGGCTGGCTGGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHSKAQG*GWLVDY
Trigger: ATAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGA...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAAAATGGTGGCATCCTaGCTGACACGAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFKMVAS*LTRVGL
Trigger: CAAACCAACTCGTGTCAGGCAGGATGCCACCATTTT...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACTCCCTGGACTCGCTaGACATTGGAGAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHTPWTR*TLEKSV
Trigger: CACACTCTTCTCCAATGTGCAGCGAGTCCAGGGAGT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATTCCATAACATTGCCCTaGAACTGCCACAGAACCCTA +
Preference number: 4 (lower is better)
Translates to: LASCSFLFPILSYDFISNSITLP*NCHRTL
Trigger: TAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATGGA...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATCATGGACATGCCAAATaGCAGTGCTCTTCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHHGHAK*QCSSPS
Trigger: AGAGGGCGAAGAGCACTGGCATTTGGCATGTCCATG...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTACAGCACAGTCTCTTCTaGAGCTCAGACTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLQHSLF*SSDLAS
Trigger: AGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTG...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATTGCAGGCAGGAATTATaGAGGCCAGTGTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHCRQEL*RPVFGA
Trigger: TGCCCCAAACACTGGCCTCCATAATTCCTGCCTGCA...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR GCA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGGACCAGTCATTGCTaGAGAAACAAGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHRTSHC*RNKQGD
Trigger: GTCACCCTGCTTGTTTCTGCAGCAATGACTGGTCCT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CCA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAGAGTCTCCAATGTCATaGACATGCCAAATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIESPMS*TCQMPV
Trigger: CACTGGCATTTGGCATGTCCATGACATTGGAGACTC...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS GCA 90 bp AGCAGGAAGGACGGCAGCGGGAGCCGCTCACACTTAGGGAGGCTCTaGAGCCGGCGCAGCTCGGCGGAGAAGCGCACGTTGGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: SRKDGSGSRSHLGRL*SRRSSAEKRTLVSM
Trigger: CATGGACACCAACGTGCGCTTCTCCGCCGAGCTGCGCCGGCTGCAGAGCCTCCCTAAGTGTGAGCGGCTCCCGCTGCCGTCCTTCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS TCA 90 bp CCAGCCAGCCTCCGCACAGTGCCAGGAGCTGAGGCAGAGCCATTCTaGGCCAGGACTCCAGCCATGGGGAGCAGAGGCGTGCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PASLRTVPGAEAEPF*ARTPAMGSRGVQGD
Trigger: GTCACCCTGCACGCCTCTGCTCCCCATGGCTGGAGTCCTGGCTCAGAATGGCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS GCA 90 bp GGGCATCTGCATCCTGAGCCCGGCCTTCAGCACCCCCTTCAAACCTaGCAGCCAGCCTCCGCACAGTGCCAGGAGCTGAGGCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: GHLHPEPGLQHPLQT*QPASAQCQELRQSH
Trigger: ATGGCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGGCTGGCAGGTTTGAAGGGGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS GCA 90 bp ATGCGCCTCTCCTGGGGGCTGAGGGTATCCAGAAGACCGCTGGCTTaGACAGCCGGAAGCTCCTGCCACAGGGTGTTGCGAGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: MRLSWGLRVSRRPLA*TAGSSCHRVLRGPG
Trigger: CCCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATACCCTCAGCCCCCAGGAGAGGCGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS TCA 90 bp ACCCCCTTCAAACCTGCCAGCCAGCCTCCGCACAGTGCCAGGAGCTaGGGCAGAGCCATTCTGAGCCAGGACTCCAGCCATGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: TPFKPASQPPHSARS*GRAILSQDSSHGEQ
Trigger: CTGCTCCCCATGGCTGGAGTCCTGGCTCAGAATGGCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGGCTGGCAGGTTTGAAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS TCA 90 bp ACATCTGCTCTCGCTTGGAGACCTGGCTCCGGGGCATCTGCATCCTaGGCCCGGCCTTCAGCACCCCCTTCAAACCTGCCAGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: TSALAWRPGSGASAS*ARPSAPPSNLPASL
Trigger: GAGGCTGGCTGGCAGGTTTGAAGGGGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS GCA 90 bp CTGAGGGTATCCAGAAGACCGCTGGCTTGCACAGCCGGAAGCTCCTaGCACAGGGTGTTGCGAGGTCCAGGGGGTCGTGGGAAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LRVSRRPLACTAGSS*HRVLRGPGGRGKVG
Trigger: ACCCACCTTCCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATACCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCCAGGGTGACCGATGCTaGGAGGGTGGGGGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPQGDRC*EGGGGS
Trigger: GCTCCCGCCCCCACCCTCCAAGCATCGGTCACCCTG...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS GCA 90 bp CCCATTCACATCTGCTCTCGCTTGGAGACCTGGCTCCGGGGCATCTaGATCCTGAGCCCGGCCTTCAGCACCCCCTTCAAACCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PIHICSRLETWLRGI*ILSPAFSTPFKPAS
Trigger: GCTGGCAGGTTTGAAGGGGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGTGAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS CCA 90 bp GGCCCCACAGCGTGGGCATGCACCACATCACACAAGTCGCTGATGTaGGGGGAAGAGCGCACACGGGACAGGAGCGTTGCTAGAAACCGC +
Preference number: 5 (lower is better)
Translates to: GPTAWACTTSHKSLM*GEERTRDRSVARNR
Trigger: GCGGTTTCTAGCAACGCTCCTGTCCCGTGTGCGCTCTTCCCCCCACATCAGCGACTTGTGTGATGTGGTGCATGCCCACGCTGTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCAGAAGACCGCTGGCTaGCACAGCCGGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRQKTAG*HSRKLL
Trigger: CAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS GCA 90 bp CTGCCACAGGGTGTTGCGAGGTCCAGGGGGTCGTGGGAAGGTGGGTaGATCTCCAGCATTTGCTGGAGAAGGACTCCCATCCTCACCCAC +
Preference number: 5 (lower is better)
Translates to: LPQGVARSRGSWEGG*ISSICWRRTPILTH
Trigger: GTGGGTGAGGATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCACCCACCTTCCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS CCA 90 bp GCTCCTGCCACAGGGTGTTGCGAGGTCCAGGGGGTCGTGGGAAGGTaGGTGCATCTCCAGCATTTGCTGGAGAAGGACTCCCATCCTCAC +
Preference number: 5 (lower is better)
Translates to: APATGCCEVQGVVGR*VHLQHLLEKDSHPH
Trigger: GTGAGGATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCACCCACCTTCCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGCAGAAGACCGCTGGCTaGCACAGCCGGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWQKTAG*HSRKLL
Trigger: CAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTG...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTACCAGGGGCAGGGCCTaGACTTTGTGGAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRTRGRA*TLWKRS
Trigger: GCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGGT...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCAGGAGTGGCAGGAGTTaGCGCTCAGCAGTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFRSGRS*RSAVER
Trigger: CCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCCT...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCAGGACCCAGCTACTGGCCATCTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTCTGACACGAGTTGGTTaGGGAGGCTTGAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SGPSYWPSSVPWAPLPGRLTRVG*GGLRSG
Trigger: GCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAG...ACGGCCTGGCAGAGGAGCCCAAGGGACTGAAGATGGCCAGTAGCTGGGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCAACGCTCGATGATCTaGCTGACAGCACCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRQRSMI*LTAPRA
Trigger: GGCCCTGGGTGCTGTCAGCAAGATCATCGAGCGTTG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCACCAGGGGCAGGGCCTaGACTTTGTGGAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPTRGRA*TLWKRS
Trigger: GCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGGT...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 90 bp GGTGGCATCCTGCCTGACACGAGTTGGTTTGGGAGGCTTGAGGAGTaGCAGGAGTTTGCGCTCAGCAGTGGAGCGGTAGGATGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: GGILPDTSWFGRLEE*QEFALSSGAVGCED
Trigger: GTCCTCACATCCTACCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAGGATGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
ENST00000647883.1
CDS-3UTR CAA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGAGGAGTGGCAGGAGTTaGCGCTCAGCAGTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SPPLVSCEALAHLEADALRSGRS*RSAVER
Trigger: CCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCCT...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGCCCTCCCCTCCACAGTaGCTGGAGGAGTATTCTGAG +
Preference number: 5 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWPSPPQ*LEEYSE
Trigger: CTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGGG...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGCAGAAGACCGCTGGCTaGCACAGCCGGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPPLVSCEALAHLEADALQKTAG*HSRKLL
Trigger: CAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTG...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCCAACCTTCAGGGGTCTaGTGCAGGTGTTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPQPSGV*CRCLGA
Trigger: TGCCCCCAAACACCTGCACAAGACCCCTGAAGGTTG...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS GCA 90 bp TTGTGGAAGCGCAGCCTTTGGGTGAGCCGGATCAGCTCTTCAGTCTaGTTCATGCGCCCCACCTCAGCGCTGCAACGCTCGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: LWKRSLWVSRISSSV*FMRPTSALQRSMIL
Trigger: CAAGATCATCGAGCGTTGCAGCGCTGAGGTGGGGCGCATGAAGCAGACTGAAGAGCTGATCCGGCTCACCCAAAGGCTGCGCTTCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCTGACACGAGTTGGTTaGGGAGGCTTGAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFLTRVG*GGLRSG
Trigger: GCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGCGGAGAAGCGCACGTaGGTGTCCATGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: HNIALQLPQNPSLQETQSAEKRT*VSMRRL
Trigger: CAGCCGCCTCATGGACACCAACGTGCGCTTCTCCGC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCATGCTCTGGATGGGGTaGGGCAGCCACACCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SLALSIAGILIGHRLSQLMLWMG*GSHTRS
Trigger: AGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCAT...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 90 bp GGGGTGCCTGAAGAAGATCCAACAGCCTCGAGAAGCCTCTGGTTCTaGCGAAGGTGCCTCCTCCTTTCGTGTTCCCCTGTGACTTCACAC +
Preference number: 5 (lower is better)
Translates to: GVPEEDPTASRSLWF*RRCLLLSCSPVTSH
Trigger: GTGTGAAGTCACAGGGGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGGATCTTCTTCAGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 90 bp GCATTGGGGGTGCCTGAAGAAGATCCAACAGCCTCGAGAAGCCTCTaGTTCTGGCGAAGGTGCCTCCTCCTTTCGTGTTCCCCTGTGACT +
Preference number: 5 (lower is better)
Translates to: ALGVPEEDPTASRSL*FWRRCLLLSCSPVT
Trigger: AGTCACAGGGGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGGATCTTCTTCAGGCACCCCCAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGGGTTGGTGCATCATaGGAGTTTCGGGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGVGAS*EFRGSS
Trigger: AGAACTACCCCGAAACTCCAATGATGCACCAACCCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCAACGCTCGATGATCTaGCTGACAGCACCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLALSIAGILIGHRLSQLQRSMI*LTAPRA
Trigger: GGCCCTGGGTGCTGTCAGCAAGATCATCGAGCGTTG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTGCCATGACCTAGATTaGTCTTCCTTGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRCHDLD*SSLALS
Trigger: GCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCA...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CTTCAGTCCCTTGGGCTCCTCTGCCAGGCCGTTGGCTGCTCCATAACATTGCCCGGAGCACTCAGTCATTaGTGGGTCAGGAGCACAATC +
Preference number: 5 (lower is better)
Translates to: LQSLGLLCQAVGCSITLPGALSH*WVRSTI
Trigger: GATTGTGCTCCTGACCCACAAATGACTGAGTGCTCC...GGGCAATGTTATGGAGCAGCCAACGGCCTGGCAGAGGAGCCCAAGGGACTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGGAGCACTCAGTCATTaGTGGGTCAGGAGCACAATC +
Preference number: 5 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWGALSH*WVRSTI
Trigger: GATTGTGCTCCTGACCCACAAATGACTGAGTGCTCC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTGCCTTGCTGTCTCTGTCCCTCGCCTCCTCTGGTATCATGCGAGGCACTGGGTTGGGGATTGTAGTTaGCTGGGCTTTAGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: VCLAVSVPRLLWYHARHWVGDCS*LGFSSP
Trigger: GGGGGAACTAAAGCCCAGCAAACTACAATCCCCAAC...CCAGTGCCTCGCATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCAGAGCCCAGTGCCTGTaGGGGATTGTAGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFRAQCL*GIVVCW
Trigger: CCAGCAAACTACAATCCCCAACAGGCACTGGGCTCT...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS TCA 90 bp GGCCCTTGTCCCCTCACCTTTGTGGAGGTGGGATTTAGCTGGAGCTaGAGGTTAGTCTGCCCTCAGGTAGAAGCATGGTGGGGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GPCPLTFVEVGFSWS*RLVCPQVEAWWGEN
Trigger: GTTCTCTCCCCACCATGCTTCTACCTGAGGGCAGACTAACCTTCAGCTCCAGCTAAATCCCACCTCCACAAAGGTGAGGGGACAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS GCA 90 bp GAAGAAGATCCAACAGCCTCGAGAAGCCTCTGGTTCTGGCGAAGGTaGCTCCTCCTTTCGTGTTCCCCTGTGACTTCACACACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EEDPTASRSLWFWRR*LLLSCSPVTSHTSW
Trigger: CCAGCTGGTGTGTGAAGTCACAGGGGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGGATCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGGGTGCACATTGGGGTaGGTGCATCATTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPGCTLG*VHHWSF
Trigger: GAAACTCCAATGATGCACCAACCCCAATGTGCACCC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCGTGCATCTCCAGCATTaGCTGGAGAAGGACTCCCAT +
Preference number: 5 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFVHLQH*LEKDSH
Trigger: ATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCAC...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGCTCGATCTCTATGGTaGCCACGAGAGGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRARSLW*PREVVS
Trigger: AGATACTACCTCTCGTGGCAACCATAGAGATCGAGC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TTGGGCAGCCACACCCGCTCTCCAATCTCTCCCCACTGTTTGGCCCAGTGTTTCCCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LGSHTRSPISPHCLAQCFPHSFL*LWVQAA
Trigger: GGCCGCCTGAACCCACAGCAATAAGAATGAATGAGG...GAAACACTGGGCCAAACAGTGGGGAGAGATTGGAGAGCGGGTGTGGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTCTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRLDLSS*ALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAG...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCGCCTCCTCTGGTATCATGCGAGGCACTGGCTCATCTGGAAGCAGATGCTCTGGGCTGCTCCATAACATaGCCCTGCAACTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: SPPLVSCEALAHLEADALGCSIT*PCNCHR
Trigger: TCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCC...CAGAGCATCTGCTTCCAGATGAGCCAGTGCCTCGCATGATACCAGAGGAGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGATGCTCTGGATGGGGTaGGGCAGCCACACCCGCTCT +
Preference number: 5 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKMLWMG*GSHTRS
Trigger: AGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCAT...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTTTCTTCATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 5 (lower is better)
Translates to: RKPRRFTGWPVVHSSRFFMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...GAAGAAACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTCAGGCACATCTGCTCTCGCTaGGAGACCTGGCTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: HWPHIQGILIHSYCCGFRHICSR*ETWLRG
Trigger: GCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGTG...CCTGAACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATCCCTCCCCTCCACAGTaGCTGGAGGAGTATTCTGAG +
Preference number: 5 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHPSPPQ*LEEYSE
Trigger: CTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGGG...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAACCAGGGGCAGGGCCTaGACTTTGTGGAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: TQHSLFWSSDLASFLERITRGRA*TLWKRS
Trigger: GCTGCGCTTCCACAAAGTCAAGGCCCTGCCCCTGGT...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCCGTCCTTCAGTCTaGGCAGGTGCAGACGACTCT +
Preference number: 5 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKLRPSV*AGADDS
Trigger: AGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGAG...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATCAACCTTCAGGGGTCTaGTGCAGGTGTTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHQPSGV*CRCLGA
Trigger: TGCCCCCAAACACCTGCACAAGACCCCTGAAGGTTG...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTCAACCTTCAGGGGTCTaGTGCAGGTGTTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: FTQMQDLMWFQSSRLRLAQPSGV*CRCLGA
Trigger: TGCCCCCAAACACCTGCACAAGACCCCTGAAGGTTG...AGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCATCTGGGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCCTTGGCCCTGAGCATAGCAGGAATACTCATTGGCCATAGGCTCAGCCAGCTCCCTCATTCATTCTTATaGCTGTGGGTTCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SLALSIAGILIGHRLSQLPHSFL*LWVQAA
Trigger: GGCCGCCTGAACCCACAGCAATAAGAATGAATGAGG...GAGCTGGCTGAGCCTATGGCCAATGAGTATTCCTGCTATGCTCAGGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGGGGTTGGTGCATCATaGGAGTTTCGGGGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: HNIALQLPQNPSLQETQSGVGAS*EFRGSS
Trigger: AGAACTACCCCGAAACTCCAATGATGCACCAACCCC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAGCGGAGAAGCGCACGTaGGTGTCCATGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GMETSISQTQKTGPVIAAAEKRT*VSMRRL
Trigger: CAGCCGCCTCATGGACACCAACGTGCGCTTCTCCGC...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCAACGCTCGATGATCTaGCTGACAGCACCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPQRSMI*LTAPRA
Trigger: GGCCCTGGGTGCTGTCAGCAAGATCATCGAGCGTTG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGGCTGCTCCATAACATaGCCCTGCAACTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHGCSIT*PCNCHR
Trigger: TCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTACTGGAGTCATCCCCCTaGAATCCCCTCCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLLESSP*NPLHSQ
Trigger: CTGAGAGTGGAGGGGATTCAAGGGGGATGACTCCAG...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421050.2
CDS-3UTR CAA 90 bp GGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCATTGCTGCAAGGAGTGGCAGGAGTTaGCGCTCAGCAGTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GMETSISQTQKTGPVIAARSGRS*RSAVER
Trigger: CCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCCT...TGCAGCAATGACTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTCTCCGTCCTTCAGTCTaGGCAGGTGCAGACGACTCT +
Preference number: 5 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPLRPSV*AGADDS
Trigger: AGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGAG...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GGTCCACAGCTCCCGTTTCTTCACCCAGATGCAGGATCTAATGTGGTTCCAAAGTGCCATGACCTAGATTaGTCTTCCTTGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GPQLPFLHPDAGSNVVPKCHDLD*SSLALS
Trigger: GCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCA...CTTTGGAACCACATTAGATCCTGCATCTGGGTGAAGAAACGGGAGCTGTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGGAGCACTCAGTCATTaGTGGGTCAGGAGCACAATC +
Preference number: 5 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHGALSH*WVRSTI
Trigger: GATTGTGCTCCTGACCCACAAATGACTGAGTGCTCC...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAAGGCTGCTCCATAACATaGCCCTGCAACTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPEGCSIT*PCNCHR
Trigger: TCTGTGGCAGTTGCAGGGCAATGTTATGGAGCAGCC...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGGGTGCACATTGGGGTaGGTGCATCATTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLGCTLG*VHHWSF
Trigger: GAAACTCCAATGATGCACCAACCCCAATGTGCACCC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp CATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCCACATCTGCTCTCGCTaGGAGACCTGGCTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: HSCSQFYPTTLSPMRPFFHICSR*ETWLRG
Trigger: GCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGTG...GAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp TGGATGAATGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 5 (lower is better)
Translates to: WMNGLCSLRATLVGVSQHMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...ATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCATTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGCTCGATCTCTATGGTaGCCACGAGAGGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: LLCPEARSLWLPREVVSPARSLW*PREVVS
Trigger: AGATACTACCTCTCGTGGCAACCATAGAGATCGAGC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AAGGCAAGAAAGCCCAGGAGGTTCACTGGCTGGCCTGTGGTCCACAGCTCCCGTGACTTAGCATCTTTCTaGGAGCGAATAATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KARKPRRFTGWPVVHSSRDLASF*ERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTC...ACGGGAGCTGTGGACCACAGGCCAGCCAGTGAACCTCCTGGGCTTTCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ACCCAGCACAGTCTCTTCTGGAGCTCAGACTTAGCATCTTTCTTGGAGCGAATAGTGCATCTCCAGCATTaGCTGGAGAAGGACTCCCAT +
Preference number: 5 (lower is better)
Translates to: TQHSLFWSSDLASFLERIVHLQH*LEKDSH
Trigger: ATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCAC...TATTCGCTCCAAGAAAGATGCTAAGTCTGAGCTCCAGAAGAGACTGTGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATGCAGGATCTAATGTGGTTCCAAAGCTCAAGGCTGAGGCTGGCTGGTGGATTAGCTCGATCTCTATGGTaGCCACGAGAGGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: MQDLMWFQSSRLRLAGGLARSLW*PREVVS
Trigger: AGATACTACCTCTCGTGGCAACCATAGAGATCGAGC...TAATCCACCAGCCAGCCTCAGCCTTGAGCTTTGGAACCACATTAGATCCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATTCTTATTGCTGTGGGTTCAGGCGGCCGTTTTCATTGGCTGCTCTGTCCTGAACTAGATTTGTCTTCCTaGGCCCTGAGCATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ILIAVGSGGRFHWLLCPELDLSS*ALSIAG
Trigger: TCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAG...TTCAGGACAGAGCAGCCAATGAAAACGGCCGCCTGAACCCACAGCAATAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CTGCTCTGTCCTGAAGCTCGATCTCTATGGTTGCCACGAGAGGTAGTATCTCCAGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: LLCPEARSLWLPREVVSPVTTGL*GPDHHF
Trigger: AAAATGGTGATCTGGACCCAAGAGACCAGTAGTCAC...TGGAGATACTACCTCTCGTGGCAACCATAGAGATCGAGCTTCAGGACAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TGGGCTTTGTTCTCTCCGTGCCACACTGGTAGGTGTCTCCCAACATGTGCCCCCGACTTAGCATCTTTCTaGGAGCGAATAATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: WALFSPCHTGRCLPTCAPDLASF*ERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTC...GGGGGCACATGTTGGGAGACACCTACCAGTGTGGCACGGAGAGAACAAAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTTATGGAGGCCAGTGTTaGGGGCAAGGAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSIGHTFKASSFILIAVGYGGQC*GQGEGS
Trigger: AGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATA...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATGCGGAGAAGCGCACGTaGGTGTCCATGAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHAEKRT*VSMRRL
Trigger: CAGCCGCCTCATGGACACCAACGTGCGCTTCTCCGC...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCTATGGAGGCCAGTGTTaGGGGCAAGGAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SCSFLFPILSYDFISNEAYGGQC*GQGEGS
Trigger: AGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATA...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp AACTGCCATGACCTAGATTTGTCTTCCTTGGCCCTGAGCATAGCAGGAATACTCAGGCCCTGCACCTGTTaGGATTCCATCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: NCHDLDLSSLALSIAGILRPCTC*DSIFRK
Trigger: CTTTCTGAAGATGGAATCCAAACAGGTGCAGGGCCT...GAGTATTCCTGCTATGCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647883.1
CDS-3UTR CAA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTACCCTCCCCTCCACAGTaGCTGGAGGAGTATTCTGAG +
Preference number: 5 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLPSPPQ*LEEYSE
Trigger: CTCAGAATACTCCTCCAGCAACTGTGGAGGGGAGGG...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCTGCCATGACCTAGATTaGTCTTCCTTGGCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SCSFLFPILSYDFISNEACHDLD*SSLALS
Trigger: GCTCAGGGCCAAGGAAGACAAATCTAGGTCATGGCA...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GACTACTGGTCTCTTGGGTCCAGATCACCATTTTCTTTGGCTGATTGGCTTCCTGTGACTACTGGTCTCTaGGGTCCAGATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: DYWSLGSRSPFSLADWLPVTTGL*GPDHHF
Trigger: AAAATGGTGATCTGGACCCAAGAGACCAGTAGTCAC...AGGAAGCCAATCAGCCAAAGAAAATGGTGATCTGGACCCAAGAGACCAGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp ATACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATATGCTCTGGATGGGGTaGGGCAGCCACACCCGCTCT +
Preference number: 5 (lower is better)
Translates to: IHTYLHMHMYTHRFSETHMLWMG*GSHTRS
Trigger: AGAGCGGGTGTGGCTGCCCAACCCCATCCAGAGCAT...ATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS TCA 90 bp CAACTGCAATATCAAGGTCCAGGCATCTATAGATCTCCTCCACCCTaGCTCCCTTCAAATCCCGACATACAGAAACCAGATATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: QLQYQGPGIYRSPPP*LPSNPDIQKPDIPN
Trigger: GTTTGGGATATCTGGTTTCTGTATGTCGGGATTTGAAGGGAGTCAGGGTGGAGGAGATCTATAGATGCCTGGACCTTGATATTGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS GCA 90 bp TGGGCTGACATCTTCCTCTGTGCTCTTCAAAGGAGTGAGGTGCTCTaGTGGAGTCATCCCCTTTATCTTTTTGGAACCAGTTGCTATTTT +
Preference number: 5 (lower is better)
Translates to: WADIFLCALQRSEVL*WSHPLYLFGTSCYF
Trigger: AAAATAGCAACTGGTTCCAAAAAGATAAAGGGGATGACTCCAGCAGAGCACCTCACTCCTTTGAAGAGCACAGAGGAAGATGTCAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000455564.3
CDS-3UTR CAA 90 bp GTCTCCATTGGCCACACATTCAAGGCATCCTCATTCATTCTTATTGCTGTGGGTAGGACTGTCCCCTGTTaGGATTCCATCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: VSIGHTFKASSFILIAVGRTVPC*DSIFRK
Trigger: CTTTCTGAAGATGGAATCCAAACAGGGGACAGTCCT...ACCCACAGCAATAAGAATGAATGAGGATGCCTTGAATGTGTGGCCAATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS-3UTR CAA 90 bp TCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGAGGCCATGGATGAATGGGCTTaGTTCTCTCCGTGCCACACT +
Preference number: 5 (lower is better)
Translates to: SCSFLFPILSYDFISNEAMDEWA*FSPCHT
Trigger: AGTGTGGCACGGAGAGAACAAAGCCCATTCATCCAT...GGCCTCATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp CATAACATTGCCCTGCAACTGCCACAGAACCCTAGCCTCCAAGAGACCCAAAGCGACTTAGCATCTTTCTaGGAGCGAATAATAGGAAAA +
Preference number: 5 (lower is better)
Translates to: HNIALQLPQNPSLQETQSDLASF*ERIIGK
Trigger: TTTTCCTATTATTCGCTCCAAGAAAGATGCTAAGTC...GCTTTGGGTCTCTTGGAGGCTAGGGTTCTGTGGCAGTTGCAGGGCAATGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TTTTATCCTACGACTTTATCTCCAATGAGGCCCTTTTTCAACTGCCATGACCTATATGGAGGCCAGTGTTaGGGGCAAGGAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: FYPTTLSPMRPFFNCHDLYGGQC*GQGEGS
Trigger: AGACCCTTCTCCTTGCCCCAAACACTGGCCTCCATA...TAGGTCATGGCAGTTGAAAAAGGGCCTCATTGGAGATAAAGTCGTAGGATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACTGACACGAGTTGGTTaGGGAGGCTTGAGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHILTRVG*GGLRSG
Trigger: GCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TTGGCTTCCTGCTCATTCCTGTTCCCAATTTTATCCTACGACTTTATCTCCAATGTGCATCTCCAGCATTaGCTGGAGAAGGACTCCCAT +
Preference number: 5 (lower is better)
Translates to: LASCSFLFPILSYDFISNVHLQH*LEKDSH
Trigger: ATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCAC...ATTGGAGATAAAGTCGTAGGATAAAATTGGGAACAGGAATGAGCAGGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATACTCCGTCCTTCAGTCTaGGCAGGTGCAGACGACTCT +
Preference number: 5 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHILRPSV*AGADDS
Trigger: AGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGAG...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS-3UTR CAA 90 bp GGAAGCATCCAGGAATGGAAACTAGTATTTCCCAGACTCAAAAGACAGGACCAGTCTTTTTGGAACCAGTaGCTATTTTCAGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: GSIQEWKLVFPRLKRQDQSFWNQ*LFSACP
Trigger: AGGACAGGCTGAAAATAGCAACTGGTTCCAAAAAGA...CTGGTCCTGTCTTTTGAGTCTGGGAAATACTAGTTTCCATTCCTGGATGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361926.8
CDS-3UTR CAA 90 bp TACACACATATCTACACATGCACATGTACACACACAGATTTTCTGAGACACATAAGGACTGTCCCCTGTTaGGATTCCATCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: YTHIYTCTCTHTDFLRHIRTVPC*DSIFRK
Trigger: CTTTCTGAAGATGGAATCCAAACAGGGGACAGTCCT...TATGTGTCTCAGAAAATCTGTGTGTGTACATGTGCATGTGTAGATATGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000421050.2
CDS GCA 72 bp GACGGCAGCGGGAGCCGCTCACACTTAGGGAGGCTCTaGAGCCGGCGCAGCTCGGCGGAGAAGCGCACGTTG +
Preference number: 6 (lower is better)
Translates to: DGSGSRSHLGRL*SRRSSAEKRTL
Trigger: CAACGTGCGCTTCTCCGCCGAGCTGCGCCGGCTGCAGAGCCTCCCTAAGTGTGAGCGGCTCCCGCTGCCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 72 bp GGGCAGGCCAGGCCAGCATCTGGAGCACCGTTCTCCTaGGACCCACTCCCGGTGAGGGGAGCTTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: GQARPASGAPFS*DPLPVRGASLS
Trigger: GGAGAGAGAAGCTCCCCTCACCGGGAGTGGGTCCCAGGAGAACGGTGCTCCAGATGCTGGCCTGGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000579439.5
CDS GCA 72 bp TCCAGAAGACCGCTGGCTTGCACAGCCGGAAGCTCCTaGCACAGGGTGTTGCGAGGTCCAGGGGGTCGTGGG +
Preference number: 6 (lower is better)
Translates to: SRRPLACTAGSS*HRVLRGPGGRG
Trigger: CCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS CAA 90 bp CATGCGCCTCTCCTGGGGGCTGAGGGTATCCAGAAGACCGCTGGCTaGCACAGCCGGAAGCTCCTGCCACAGGGTGTTGCGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: HAPLLGAEGIQKTAG*HSRKLLPQGVARSR
Trigger: CCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATACCCTCAGCCCCCAGGAGAGGCGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS TCA 72 bp CTCGCTTGGAGACCTGGCTCCGGGGCATCTGCATCCTaGGCCCGGCCTTCAGCACCCCCTTCAAACCTGCCA +
Preference number: 6 (lower is better)
Translates to: LAWRPGSGASAS*ARPSAPPSNLP
Trigger: TGGCAGGTTTGAAGGGGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS GCA 72 bp TGGCTTGCACAGCCGGAAGCTCCTGCCACAGGGTGTTaGGAGGTCCAGGGGGTCGTGGGAAGGTGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: WLAQPEAPATGC*EVQGVVGRWVH
Trigger: ATGCACCCACCTTCCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS CAA 72 bp CTCCTGGGGGCTGAGGGTATCCAGAAGACCGCTGGCTaGCACAGCCGGAAGCTCCTGCCACAGGGTGTTGCG +
Preference number: 6 (lower is better)
Translates to: LLGAEGIQKTAG*HSRKLLPQGVA
Trigger: CGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATACCCTCAGCCCCCAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS CAA 90 bp AGAAGACCGCTGGCTTGCACAGCCGGAAGCTCCTGCCACAGGGTGTaGCGAGGTCCAGGGGGTCGTGGGAAGGTGGGTGCATCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RRPLACTAGSSCHRV*RGPGGRGKVGASPA
Trigger: TGCTGGAGATGCACCCACCTTCCCACGACCCCCTGGACCTCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS GCA 72 bp TCCTGGGGGCTGAGGGTATCCAGAAGACCGCTGGCTTaGACAGCCGGAAGCTCCTGCCACAGGGTGTTGCGA +
Preference number: 6 (lower is better)
Translates to: SWGLRVSRRPLA*TAGSSCHRVLR
Trigger: TCGCAACACCCTGTGGCAGGAGCTTCCGGCTGTGCAAGCCAGCGGTCTTCTGGATACCCTCAGCCCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS GCA 72 bp CGCAGCCTTTGGGTGAGCCGGATCAGCTCTTCAGTCTaGTTCATGCGCCCCACCTCAGCGCTGCAACGCTCG +
Preference number: 6 (lower is better)
Translates to: RSLWVSRISSSV*FMRPTSALQRS
Trigger: CGAGCGTTGCAGCGCTGAGGTGGGGCGCATGAAGCAGACTGAAGAGCTGATCCGGCTCACCCAAAGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 72 bp CCCAGCCAGCGCTGCATGTCTGATAGGGAAGAAGCTTaGAGTAGTCGGTGGGTGGGGCGGCCCTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: PSQRCMSDREEA*SSRWVGRPWWL
Trigger: CAACCACCAGGGCCGCCCCACCCACCGACTACTCCAAGCTTCTTCCCTATCAGACATGCAGCGCTGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS TCA 72 bp AAACCTGCCAGCCAGCCTCCGCACAGTGCCAGGAGCTaGGGCAGAGCCATTCTGAGCCAGGACTCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: KPASQPPHSARS*GRAILSQDSSH
Trigger: ATGGCTGGAGTCCTGGCTCAGAATGGCTCTGCCTCAGCTCCTGGCACTGTGCGGAGGCTGGCTGGCAGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS TCA 72 bp CACCTGGAGCACCGTTCTCCTGGGACCCACTCCCGGTaGGGGGAGCTTCTCTCTCCCCATTCACATCTGCTC +
Preference number: 6 (lower is better)
Translates to: HLEHRSPGTHSR*GELLSPHSHLL
Trigger: GAGCAGATGTGAATGGGGAGAGAGAAGCTCCCCTCACCGGGAGTGGGTCCCAGGAGAACGGTGCTCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS GCA 72 bp ATCTGCTCTCGCTTGGAGACCTGGCTCCGGGGCATCTaGATCCTGAGCCCGGCCTTCAGCACCCCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: ICSRLETWLRGI*ILSPAFSTPFK
Trigger: TTTGAAGGGGGTGCTGAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS CCA 72 bp TCTCTCCCCATTCACATCTGCTCTCGCTTGGAGACCTaGCTCCGGGGCATCTGCATCCTGAGCCCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLPIHICSRLET*LRGICILSPAF
Trigger: GAAGGCCGGGCTCAGGATGCAGATGCCCCGGAGCCAGGTCTCCAAGCGAGAGCAGATGTGAATGGGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000579439.5
CDS CCA 72 bp GCGTGGGCATGCACCACATCACACAAGTCGCTGATGTaGGGGGAAGAGCGCACACGGGACAGGAGCGTTGCT +
Preference number: 6 (lower is better)
Translates to: AWACTTSHKSLM*GEERTRDRSVA
Trigger: AGCAACGCTCCTGTCCCGTGTGCGCTCTTCCCCCCACATCAGCGACTTGTGTGATGTGGTGCATGCCCACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CAA 90 bp CCAGGCCAGCATCTGTGGGAGACAGGTAGCCTAAGGAGAAAGCCCTaGGGGCCCAGCTCCACCCCCGCCCAGACCATCTCCATCTTTAAC +
Preference number: 6 (lower is better)
Translates to: PGQHLWETGSLRRKP*GPSSTPAQTISIFN
Trigger: GTTAAAGATGGAGATGGTCTGGGCGGGGGTGGAGCTGGGCCCCAAGGGCTTTCTCCTTAGGCTACCTGTCTCCCACAGATGCTGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS TCA 72 bp CATCTGGAGCACCGTTCTCCTGGGACCCACTCCCGGTaGGGGGAGCTTCTCTCTCCCCATTCACATCTGCTC +
Preference number: 6 (lower is better)
Translates to: HLEHRSPGTHSR*GELLSPHSHLL
Trigger: GAGCAGATGTGAATGGGGAGAGAGAAGCTCCCCTCACCGGGAGTGGGTCCCAGGAGAACGGTGCTCCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000579439.5
CDS TCA 72 bp GCAGGAGTTTGCGCTCAGCAGTGGAGCGGTAGGATGTaGGGACAACGGCAGGGTGACCGATGCTTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: AGVCAQQWSGRM*GQRQGDRCLEG
Trigger: ACCCTCCAAGCATCGGTCACCCTGCCGTTGTCCTCACATCCTACCGCTCCACTGCTGAGCGCAAACTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
CDS GCA 72 bp GGTGTTGCGAGGTCCAGGGGGTCGTGGGAAGGTGGGTaGATCTCCAGCATTTGCTGGAGAAGGACTCCCATC +
Preference number: 6 (lower is better)
Translates to: GVARSRGSWEGG*ISSICWRRTPI
Trigger: GATGGGAGTCCTTCTCCAGCAAATGCTGGAGATGCACCCACCTTCCCACGACCCCCTGGACCTCGCAACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000578286.1
ENST00000647883.1
CDS CCA 72 bp CTGCCTGACACGAGTTGGTTTGGGAGGCTTGAGGAGTaGCAGGAGTTTGCGCTCAGCAGTGGAGCGGTAGGA +
Preference number: 6 (lower is better)
Translates to: LPDTSWFGRLEE*QEFALSSGAVG
Trigger: TCCTACCGCTCCACTGCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
ENST00000647883.1
CDS CAA 72 bp GTGGCATCCTGCCTGACACGAGTTGGTTTGGGAGGCTaGAGGAGTGGCAGGAGTTTGCGCTCAGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: VASCLTRVGLGG*RSGRSLRSAVE
Trigger: CTCCACTGCTGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAGGATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
ENST00000647883.1
CDS CAA 90 bp TCCCCTCACAGCCCAGAGGTCCACTCCCCCAGGCCCTGCACCTGTTaGGATTCCATCTTCAGAAAGCAGATCAAGATCTGGCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SPHSPEVHSPRPCTC*DSIFRKQIKIWLWG
Trigger: CCCCCACAGCCAGATCTTGATCTGCTTTCTGAAGATGGAATCCAAACAGGTGCAGGGCCTGGGGGAGTGGACCTCTGGGCTGTGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455564.3
ENST00000647883.1
CDS CAA 90 bp AGGTGTTTGGGGGCAGCCCTGGACTCCAGACTCCGTCCTTCAGTCTaGGCAGGTGCAGACGACTCTGAACACAGTTCCTGGGAACAGTCA +
Preference number: 6 (lower is better)
Translates to: RCLGAALDSRLRPSV*AGADDSEHSSWEQS
Trigger: TGACTGTTCCCAGGAACTGTGTTCAGAGTCGTCTGCACCTGCCAAGACTGAAGGACGGAGTCTGGAGTCCAGGGCTGCCCCCAAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS GCA 72 bp CCAACAGCCTCGAGAAGCCTCTGGTTCTGGCGAAGGTaGCTCCTCCTTTCGTGTTCCCCTGTGACTTCACAC +
Preference number: 6 (lower is better)
Translates to: PTASRSLWFWRR*LLLSCSPVTSH
Trigger: GTGTGAAGTCACAGGGGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 72 bp GTCCCCGAAAATGGTGGCATCCTGCCTGACACGAGTTaGTTTGGGAGGCTTGAGGAGTGGCAGGAGTTTGCG +
Preference number: 6 (lower is better)
Translates to: VPENGGILPDTS*FGRLEEWQEFA
Trigger: CGCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAGGATGCCACCATTTTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
ENST00000647883.1
CDS CCA 72 bp GAAGAAGATCCAACAGCCTCGAGAAGCCTCTGGTTCTaGCGAAGGTGCCTCCTCCTTTCGTGTTCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: EEDPTASRSLWF*RRCLLLSCSPV
Trigger: CACAGGGGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGGATCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CCA 72 bp GTGCCTGAAGAAGATCCAACAGCCTCGAGAAGCCTCTaGTTCTGGCGAAGGTGCCTCCTCCTTTCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: VPEEDPTASRSL*FWRRCLLLSCS
Trigger: GGAACACGAAAGGAGGAGGCACCTTCGCCAGAACCAGAGGCTTCTCGAGGCTGTTGGATCTTCTTCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000647883.1
CDS CAA 72 bp CCGAAAATGGTGGCATCCTGCCTGACACGAGTTGGTTaGGGAGGCTTGAGGAGTGGCAGGAGTTTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: PKMVASCLTRVG*GGLRSGRSLRS
Trigger: TGAGCGCAAACTCCTGCCACTCCTCAAGCCTCCCAAACCAACTCGTGTCAGGCAGGATGCCACCATTTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361926.8
ENST00000421050.2
ENST00000455564.3
ENST00000581809.1
ENST00000647883.1
CDS TCA 72 bp CCCCTCACCTTTGTGGAGGTGGGATTTAGCTGGAGCTaGAGGTTAGTCTGCCCTCAGGTAGAAGCATGGTGG +
Preference number: 6 (lower is better)
Translates to: PLTFVEVGFSWS*RLVCPQVEAWW
Trigger: CCACCATGCTTCTACCTGAGGGCAGACTAACCTTCAGCTCCAGCTAAATCCCACCTCCACAAAGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS GCA 72 bp GCTCCACCCCCGCCCAGACCATCTCCATCTTTAACCTaGCCAGCAACTGCAATATCAAGGTCCAGGCATCTA +
Preference number: 6 (lower is better)
Translates to: APPPPRPSPSLT*PATAISRSRHL
Trigger: TAGATGCCTGGACCTTGATATTGCAGTTGCTGGGCAGGTTAAAGATGGAGATGGTCTGGGCGGGGGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS GCA 72 bp CCAGAGCAGCAGCTGGTGGGGAAGCAAAGAGCCCAGTaGCTGTTGGGGATTGTAGTTTGCTGGGCTTTAGTT +
Preference number: 6 (lower is better)
Translates to: PEQQLVGKQRAQ*LLGIVVCWALV
Trigger: AACTAAAGCCCAGCAAACTACAATCCCCAACAGGCACTGGGCTCTTTGCTTCCCCACCAGCTGCTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455564.3
ENST00000647883.1
CDS CAA 72 bp AGCCCAGAGGTCCACTCCCCCAGGCCCTGCACCTGTTaGGATTCCATCTTCAGAAAGCAGATCAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: SPEVHSPRPCTC*DSIFRKQIKIW
Trigger: CCAGATCTTGATCTGCTTTCTGAAGATGGAATCCAAACAGGTGCAGGGCCTGGGGGAGTGGACCTCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455564.3
ENST00000647883.1
CDS CCA 72 bp ACCAGTTGCTATTTTCAGCCTGTCCTGTCTGCCCCTTaGAGCGAGGAATGCAGGGCTGAGGTTTCCAAGTGT +
Preference number: 6 (lower is better)
Translates to: TSCYFQPVLSAP*SEECRAEVSKC
Trigger: ACACTTGGAAACCTCAGCCCTGCATTCCTCGCTCCAAGGGGCAGACAGGACAGGCTGAAAATAGCAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000583529.1
CDS CAA 72 bp AAGCCACCGTGCCCGGCCTTCTATAAGATCACAGAATaGATAAGGGCCAGAGCTGGGATTCGAAACAAGGGC +
Preference number: 6 (lower is better)
Translates to: KPPCPAFYKITE*IRARAGIRNKG
Trigger: GCCCTTGTTTCGAATCCCAGCTCTGGCCCTTATCAATTCTGTGATCTTATAGAAGGCCGGGCACGGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455564.3
CDS CCA 72 bp CTCCACTCTCAGTCACCTCCCAGGGCTTTATCTTTTTaGAACCAGTTGCTATTTTCAGCCTGTCCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: LHSQSPPRALSF*NQLLFSACPVC
Trigger: GCAGACAGGACAGGCTGAAAATAGCAACTGGTTCCAAAAAGATAAAGCCCTGGGAGGTGACTGAGAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583529.1
CDS CAA 72 bp CCTCCACTCTCAGTCACCTCCCAGGGCTTTATCTTTTaGGAACCAGTTGCTATTTTCAGCCTGTCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PPLSVTSQGFIF*EPVAIFSLSCL
Trigger: CAGACAGGACAGGCTGAAAATAGCAACTGGTTCCAAAAAGATAAAGCCCTGGGAGGTGACTGAGAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583529.1
CDS CCA 72 bp TTCCTCTGTGCTCTTCAAAGGAGTGAGGTGCTCTGCTaGAGTCATCCCCTTTATCTTTTTGGAACCAGTTGC +
Preference number: 6 (lower is better)
Translates to: FLCALQRSEVLC*SHPLYLFGTSC
Trigger: GCAACTGGTTCCAAAAAGATAAAGGGGATGACTCCAGCAGAGCACCTCACTCCTTTGAAGAGCACAGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361926.8
ENST00000455564.3