RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF12 (Homo sapiens)

Ensembl gene IDs: ENSG00000196914

Ensembl transcript IDs: ENST00000356641.7, ENST00000397843.7, ENST00000525222.1, ENST00000525960.1, ENST00000526067.1, ENST00000528225.5, ENST00000528681.1, ENST00000529970.5, ENST00000530388.1, ENST00000530747.5, ENST00000531616.1, ENST00000532823.5, ENST00000532993.5, ENST00000612968.1

Found 1041 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCGGCAGTaGAGTCAGAGGACGTGCTTCTGGAGCTGGTGTGAGCAGTTCTGC +
Preference number: 1 (lower is better)
Translates to: IFRVNHGPVWKELRQ*SQRTCFWSWCEQFC
Trigger: GCAGAACTGCTCACACCAGCTCCAGAAGCACGTCCTCTGACTTCACTGCCGCAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 90 bp GTGCAGCTGCCACACTGTGAAGAACTAGTCCCACTCTGGGCACCTTaGGACTTGACTAATCCCAGGTGGTTCACAGGCAGATCCTCTGTC +
Preference number: 1 (lower is better)
Translates to: VQLPHCEELVPLWAP*DLTNPRWFTGRSSV
Trigger: GACAGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR TCA 90 bp CCACCTGGGCACATAAGAGCCACACGGCATAGCATACCTTTGAGGTaGCCCTCAGAGAAGCAGCCTACTGGACAGCAGAGAGCTTGGAAT +
Preference number: 1 (lower is better)
Translates to: PPGHIRATRHSIPLR*PSEKQPTGQQRAWN
Trigger: ATTCCAAGCTCTCTGCTGTCCAGTAGGCTGCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCCGTGTGGCTCTTATGTGCCCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 90 bp TGGTTCACAGGCAGATCCTCTGTCACACTCTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAAC +
Preference number: 1 (lower is better)
Translates to: WFTGRSSVTLSLHPH*SQDVVRHGRYSKSN
Trigger: GTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAGAGGATCTGCCTGTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 90 bp GAACTAGTCCCACTCTGGGCACCTTGGGACTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCTGTCACACTCTCTCTGCATCCACAC +
Preference number: 1 (lower is better)
Translates to: ELVPLWAPWDLTNPR*FTGRSSVTLSLHPH
Trigger: GTGTGGATGCAGAGAGAGTGTGACAGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR TCA 90 bp AACCTGCCCCACATGCTAGGGCAAGCCCACCTGCCAGCACTGTCATaGAGGTTTAGCCTTGTTGCTAGGGATGCTCTAATAAGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: NLPHMLGQAHLPALS*RFSLVARDALISRK
Trigger: CTTCCTGCTTATTAGAGCATCCCTAGCAACAAGGCTAAACCTTCATGACAGTGCTGGCAGGTGGGCTTGCCCTAGCATGTGGGGCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR CCA 90 bp GCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGTATGTGCTaGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: AGSYQHLACSVQCMC*SAIFRVNHGPVWKE
Trigger: CTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACATACACTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 90 bp AACAGATTAGTGCAGCTGCCACACTGTGAAGAACTAGTCCCACTCTaGGCACCTTGGGACTTGACTAATCCCAGGTGGTTCACAGGCAGA +
Preference number: 1 (lower is better)
Translates to: NRLVQLPHCEELVPL*APWDLTNPRWFTGR
Trigger: TCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGCACTAATCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR GCA 90 bp ACAGTGTCACAGCAGGTCACTTCCATAGCTAAAATGCAGCCTGCTTaGTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: TVSQQVTSIAKMQPA*SGKVAFFVHHPCAL
Trigger: AAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAGCAAGCAGGCTGCATTTTAGCTATGGAAGTGACCTGCTGTGACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR GCA 90 bp TCCCCGTCTCACTTCCTCCTCTTCTTAACCTCTCTACCCAACTTCTaGATACTCCATCCTGACCTCTTTGCTTCAGGAGCAGTTGATCCT +
Preference number: 1 (lower is better)
Translates to: SPSHFLLFLTSLPNF*ILHPDLFASGAVDP
Trigger: AGGATCAACTGCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGAGGTTAAGAAGAGGAGGAAGTGAGACGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR GCA 90 bp GAAGCTGACTGTGAGGCCCTGCTAATTTTGTATTTTGAGGTCCTATaGACGCAGTTCTCAGTGGTGCCCTCTGTGACATATAGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: EADCEALLILYFEVL*TQFSVVPSVTYREG
Trigger: TCCTTCCCTATATGTCACAGAGGGCACCACTGAGAACTGCGTGCATAGGACCTCAAAATACAAAATTAGCAGGGCCTCACAGTCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CCA 90 bp AGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTaGGAATGGTACAGGTATTTCTTTGTTCCACCAGATATGTATCTG +
Preference number: 1 (lower is better)
Translates to: SFIVSIPRRWLSKSK*EWYRYFFVPPDMYL
Trigger: CAGATACATATCTGGTGGAACAAAGAAATACCTGTACCATTCCCACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR TCA 90 bp TGGAAGAAAACACACCCATTTTCAAGTGCCTGCTATTTAGTATGTTaGGGATTCCTATTAATTGTGGTTGATCCCAGCTACAGAGAAGAG +
Preference number: 1 (lower is better)
Translates to: WKKTHPFSSACYLVC*GFLLIVVDPSYREE
Trigger: CTCTTCTCTGTAGCTGGGATCAACCACAATTAATAGGAATCCTCAACATACTAAATAGCAGGCACTTGAAAATGGGTGTGTTTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR TCA 90 bp ACCCACAGAGTTCAGAGGGCACCAATGAAAGATGTGAGCAACGGATaGACTCCTTGTTTATTAACAGAATTTACAGACTTCATTTTAGTT +
Preference number: 1 (lower is better)
Translates to: THRVQRAPMKDVSNG*TPCLLTEFTDFILV
Trigger: AACTAAAATGAAGTCTGTAAATTCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTCTGAACTCTGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGAGCCAGGATGTGGTaGGACACGGCCGATACTCCA +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGARMW*DTADTP
Trigger: TGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGGGAGCCAGGATGTGGTaGGACACGGCCGATACTCCA +
Preference number: 2 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQGARMW*DTADTP
Trigger: TGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCC...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCCACTCTGGGCACCTTaGGACTTGACTAATCCCAGG +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVPLWAP*DLTNPR
Trigger: CCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 90 bp CTGCCACACTGTGAAGAACTAGTCCCACTCTGGGCACCTTGGGACTaGACTAATCCCAGGTGGTTCACAGGCAGATCCTCTGTCACACTC +
Preference number: 2 (lower is better)
Translates to: LPHCEELVPLWAPWD*TNPRWFTGRSSVTL
Trigger: GAGTGTGACAGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACAGTGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGGGCACCTTGGGACTTaGCTAATCCCAGGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKGHLGT*LIPGGS
Trigger: TGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGCATAGCATACCTTTaGGGTGACCCTCAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGIAYL*GDPQRS
Trigger: GCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 2 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGCAGCTGCCACACTGTaGAGAACTAGTCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELAAATL*RTSPTL
Trigger: CAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCTGTCACACTCTCTCTaGATCCACACTGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLSHSL*IHTGAR
Trigger: CCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCAGAGGACGTGCTTCTaGAGCTGGTGTGAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELQRTCF*SWCEQF
Trigger: GAACTGCTCACACCAGCTCCAGAAGCACGTCCTCTG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGGCACCTTGGGACTTaGCTAATCCCAGGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGHLGT*LIPGGS
Trigger: TGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVCFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTGCATACTCCATCCTaGCCTCTTTGCTTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLHTPS*PLCFRS
Trigger: GCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCTTCTGGAGCTGGTGTaGGCAGTTCTGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLLELV*AVLPSP
Trigger: TGGTGAAGGCAGAACTGCTCACACCAGCTCCAGAAG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTATAGTGAAGCAAGGTaGTCCTCCCTTCCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQYSEAR*SSLPRL
Trigger: GAGACGGGGAAGGGAGGAGCACCTTGCTTCACTATA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 2 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGACGTGCTTCTGGAGCTaGTGTGAGCAGTTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELTCFWS*CEQFCL
Trigger: AAGGCAGAACTGCTCACACCAGCTCCAGAAGCACGT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGACGTGCTTCTGGAGCTaGTGTGAGCAGTTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQTCFWS*CEQFCL
Trigger: AAGGCAGAACTGCTCACACCAGCTCCAGAAGCACGT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 90 bp GGTGTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTaGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: GVSSSAFTISFSTPP*AILLTQGPLAPSVQ
Trigger: TTGCACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTC +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELVRRVE*GNGYSL
Trigger: GAGGGAATATCCATTCCCTCACTCTACTCTCCTCAC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCTGCATACTCCATCCTaGCCTCTTTGCTTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLHTPS*PLCFRS
Trigger: GCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCCAAATCCAACAACCTaGAGTCACCTCCAGGACATG +
Preference number: 2 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELPNPTT*SHLQDM
Trigger: CATGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTGTCACACTCTCTCTaGATCCACACTGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLSHSL*IHTGAR
Trigger: CCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGCATAGCATACCTTTaGGGTGACCCTCAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGIAYL*GDPQRS
Trigger: GCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCCTATTAATTGTGGTTaGTCCCAGCTACAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVPINCG*SQLQRR
Trigger: TCTTCTCTGTAGCTGGGATCAACCACAATTAATAGG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCCAAATCCAACAACCTaGAGTCACCTCCAGGACATG +
Preference number: 2 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVPNPTT*SHLQDM
Trigger: CATGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: TSLTQRQTASNSIILKGRQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: EGTNERCEQRMNSLFINRATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGACTTCCTGCTCAATCTaGAGGGACAGTTTTACACAA +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVTSCSI*RDSFTQ
Trigger: TTGTGTAAAACTGTCCCTGCAGATTGAGCAGGAAGT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 90 bp GGAAAAACTAGCCATGAGGAAGCTGACTGTGAGGCCCTGCTAATTTaGTATTTTGAGGTCCTATGCACGCAGTTCTCAGTGGTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: GKTSHEEADCEALLI*YFEVLCTQFSVVPS
Trigger: AGAGGGCACCACTGAGAACTGCGTGCATAGGACCTCAAAATACAAAATTAGCAGGGCCTCACAGTCAGCTTCCTCATGGCTAGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: NHISTSEKKASTLKYGSPSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTTTGTTTTTACTTCCTaGTCAATCTGCAGGGACAGT +
Preference number: 2 (lower is better)
Translates to: STPPLAILLTQGPLAPSVFVFTS*SICRDS
Trigger: ACTGTCCCTGCAGATTGAGCAGGAAGTAAAAACAAA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAAAAGAGCTGCGGCAGTaGAGTCAGAGGACGTGCTTC +
Preference number: 2 (lower is better)
Translates to: TSLTQRQTASNSIILKGRKELRQ*SQRTCF
Trigger: GAAGCACGTCCTCTGACTTCACTGCCGCAGCTCTTT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAAAGAGCTGCGGCAGTaGAGTCAGAGGACGTGCTTC +
Preference number: 2 (lower is better)
Translates to: EGTNERCEQRMNSLFINRKELRQ*SQRTCF
Trigger: GAAGCACGTCCTCTGACTTCACTGCCGCAGCTCTTT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGAGTAGAGTGAGGGAATaGATATTCCCTCACAAACAG +
Preference number: 2 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSRVRE*IFPHKQ
Trigger: CTGTTTGTGAGGGAATATCCATTCCCTCACTCTACT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 90 bp TCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTaGACTCAGGGCCCTTTGGCACCATCAGTGCAAAAATTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: SAFTISFSTPPLAIL*TQGPLAPSVQKLES
Trigger: TGACTCTAATTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCCCTTGGCTATCCTTTTaGCTCAGGGCCCTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: NHISTSEKKASTLKYGSPPWLSF*LRALWH
Trigger: GTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGG...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTATTTACTTTTCTCCTaGTTAATTGCCCTCGATGGT +
Preference number: 2 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKYLLFS*LIALDG
Trigger: ACCATCGAGGGCAATTAATCAGGAGAAAAGTAAATA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCAGCATACCTTTGAGGTaGCCCTCAGAGAAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: NHISTSEKKASTLKYGSPSIPLR*PSEKQP
Trigger: AGGCTGCTTCTCTGAGGGTCACCTCAAAGGTATGCT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGGCACCTGGAAATGGTaGGGAAGGCTTCCTTCTAGG +
Preference number: 2 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASGTWKW*GRLPSR
Trigger: CCTAGAAGGAAGCCTTCCCCACCATTTCCAGGTGCC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR CAA 90 bp CCAACTTCTGCATACTCCATCCTGACCTCTTTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAAGACAAAGGTCTAAAACTCTCACTA +
Preference number: 2 (lower is better)
Translates to: PTSAYSILTSLLQEQ*ILGCTKDKGLKLSL
Trigger: TAGTGAGAGTTTTAGACCTTTGTCTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAGAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTAGCATACCTTTGAGGTaGCCCTCAGAGAAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASSIPLR*PSEKQP
Trigger: AGGCTGCTTCTCTGAGGGTCACCTCAAAGGTATGCT...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCTTCTGGAGCTGGTGTaGGCAGTTCTGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: DQSSSNSKPYIDFREESFLLELV*AVLPSP
Trigger: TGGTGAAGGCAGAACTGCTCACACCAGCTCCAGAAG...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIASLHPH*SQDVVR
Trigger: TCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 2 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATGTGGGAGGCCAAGTTaGGAGGGAAAAGAGAAGTTA +
Preference number: 2 (lower is better)
Translates to: TSLTQRQTASNSIILKGRCGRPS*EGKEKL
Trigger: TAACTTCTCTTTTCCCTCCCAACTTGGCCTCCCACA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCTGCATACTCCATCCTaGCCTCTTTGCTTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: DQSSSNSKPYIDFREESFLHTPS*PLCFRS
Trigger: GCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAG...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 2 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMLTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTC +
Preference number: 2 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYVRRVE*GNGYSL
Trigger: GAGGGAATATCCATTCCCTCACTCTACTCTCCTCAC...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 2 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIACFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 2 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASCFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGCATAGCATACCTTTaGGGTGACCCTCAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGIAYL*GDPQRS
Trigger: GCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACCTATTAATTGTGGTTaGTCCCAGCTACAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TSLTQRQTASNSIILKGRPINCG*SQLQRR
Trigger: TCTTCTCTGTAGCTGGGATCAACCACAATTAATAGG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTCTCTACCCAACTTCTaGATACTCCATCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIASLPNF*ILHPDL
Trigger: GAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAACTTCCTGCTCAATCTaGAGGGACAGTTTTACACAA +
Preference number: 2 (lower is better)
Translates to: EGTNERCEQRMNSLFINRTSCSI*RDSFTQ
Trigger: TTGTGTAAAACTGTCCCTGCAGATTGAGCAGGAAGT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 2 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIALTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTCAAATTACAATTCTaGAACTTACCCTCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLKLQF*NLPSVG
Trigger: CCCTACAGAGGGTAAGTTTCAGAATTGTAATTTGAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACAAAATGCAGCCTGCTTaGTCTGGGAAGGTAGCTTTC +
Preference number: 2 (lower is better)
Translates to: QSSSNSKPYIDFREESFHKMQPA*SGKVAF
Trigger: GAAAGCTACCTTCCCAGAGCAAGCAGGCTGCATTTT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGTCCAGTGTATGTGCTaGTCTGCAATTTTTAGGGTC +
Preference number: 2 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASVQCMC*SAIFRV
Trigger: GACCCTAAAAATTGCAGACCAGCACATACACTGGAC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTGTGGGAGGCCAAGTTaGGAGGGAAAAGAGAAGTTA +
Preference number: 2 (lower is better)
Translates to: QSSSNSKPYIDFREESFHCGRPS*EGKEKL
Trigger: TAACTTCTCTTTTCCCTCCCAACTTGGCCTCCCACA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTATGGCCAAAATGAAATaGAACGTGTGGGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLMAKMK*NVWEAK
Trigger: CTTGGCCTCCCACACGTTCCATTTCATTTTGGCCAT...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 2 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGTCCAGTGTATGTGCTaGTCTGCAATTTTTAGGGTC +
Preference number: 2 (lower is better)
Translates to: QSSSNSKPYIDFREESFHVQCMC*SAIFRV
Trigger: GACCCTAAAAATTGCAGACCAGCACATACACTGGAC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGTTTTTACTTCCTaGTCAATCTGCAGGGACAGT +
Preference number: 2 (lower is better)
Translates to: QSSSNSKPYIDFREESFHFVFTS*SICRDS
Trigger: ACTGTCCCTGCAGATTGAGCAGGAAGTAAAAACAAA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTTTTTTGGAATATATCTaGTTAGCAGTTGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLFLEYI*LAVGTW
Trigger: CCAGGTGCCAACTGCTAAGCAGATATATTCCAAAAA...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR CAA 90 bp AGTTCAGAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTaGTTTATTAACAGAATTTACAGACTTCATTTTAGTTGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: SSEGTNERCEQRMNS*FINRIYRLHFSWQK
Trigger: TTTTTGCCAACTAAAATGAAGTCTGTAAATTCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTCTGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTTGTTTTTACTTCCTaGTCAATCTGCAGGGACAGT +
Preference number: 2 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKFVFTS*SICRDS
Trigger: ACTGTCCCTGCAGATTGAGCAGGAAGTAAAAACAAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 90 bp GTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTaGAAATATGGAAGCCCCACGTATTACACCAAATTTACTAACATC +
Preference number: 2 (lower is better)
Translates to: VIQNHISTSEKKAST*KYGSPTYYTKFTNI
Trigger: GATGTTAGTAAATTTGGTGTAATACGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGAAGTACTAGAGCTATaGTCAAAGTATTTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: QSSSNSKPYIDFREESFHEVLEL*SKYFSS
Trigger: ACTGGAAAAATACTTTGACCATAGCTCTAGTACTTC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR TCA 72 bp GTCAATCACGGCCCCGTGTGGAAAGAGCTGCGGCAGTaGAGTCAGAGGACGTGCTTCTGGAGCTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: VNHGPVWKELRQ*SQRTCFWSWCE
Trigger: CTCACACCAGCTCCAGAAGCACGTCCTCTGACTTCACTGCCGCAGCTCTTTCCACACGGGGCCGTGATTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp GGCAGATCCTCTGTCACACTCTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGACACGGCCGATACTCC +
Preference number: 3 (lower is better)
Translates to: GRSSVTLSLHPH*SQDVVRHGRYS
Trigger: GGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAGAGGATCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp GTGCAGCTGCCACACTGTGAAGAACTAGTCCCACTCTaGGCACCTTGGGACTTGACTAATCCCAGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: VQLPHCEELVPL*APWDLTNPRWF
Trigger: GAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp CCACACTGTGAAGAACTAGTCCCACTCTGGGCACCTTaGGACTTGACTAATCCCAGGTGGTTCACAGGCAGA +
Preference number: 3 (lower is better)
Translates to: PHCEELVPLWAP*DLTNPRWFTGR
Trigger: TCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGCAGTTACCAACACCTaGCCTGCAGTGTCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKAVTNT*PAVSSV
Trigger: TACACTGGACACTGCAGGCAAGGTGTTGGTAACTGC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTTGACTCAGGGCCCTTaGGCACCATCAGTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLTQGP*APSVQK
Trigger: TTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR TCA 72 bp CACATGCTAGGGCAAGCCCACCTGCCAGCACTGTCATaGAGGTTTAGCCTTGTTGCTAGGGATGCTCTAATA +
Preference number: 3 (lower is better)
Translates to: HMLGQAHLPALS*RFSLVARDALI
Trigger: TATTAGAGCATCCCTAGCAACAAGGCTAAACCTTCATGACAGTGCTGGCAGGTGGGCTTGCCCTAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR GCA 72 bp CAGCAGGTCACTTCCATAGCTAAAATGCAGCCTGCTTaGTCTGGGAAGGTAGCTTTCTTTGTACACCACCCC +
Preference number: 3 (lower is better)
Translates to: QQVTSIAKMQPA*SGKVAFFVHHP
Trigger: GGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAGCAAGCAGGCTGCATTTTAGCTATGGAAGTGACCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTGGACAGCAGAGAGCTaGGAATACTGTATAGTGAAG +
Preference number: 3 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKWTAES*EYCIVK
Trigger: CTTCACTATACAGTATTCCAAGCTCTCTGCTGTCCA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAA +
Preference number: 3 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLLQEQ*ILGCTK
Trigger: TTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTTTTCCACTCCACCCTaGGCTATCCTTTTGACTCAG +
Preference number: 3 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVFSTPP*AILLTQ
Trigger: CTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR GCA 72 bp CACTTCCTCCTCTTCTTAACCTCTCTACCCAACTTCTaGATACTCCATCCTGACCTCTTTGCTTCAGGAGCA +
Preference number: 3 (lower is better)
Translates to: HFLLFLTSLPNF*ILHPDLFASGA
Trigger: TGCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGAGGTTAAGAAGAGGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACCCTTGGCTATCCTTTaGACTCAGGGCCCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: TSLTQRQTASNSIILKGRPLAIL*TQGPLA
Trigger: TGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR GCA 72 bp TGTGAGGCCCTGCTAATTTTGTATTTTGAGGTCCTATaGACGCAGTTCTCAGTGGTGCCCTCTGTGACATAT +
Preference number: 3 (lower is better)
Translates to: CEALLILYFEVL*TQFSVVPSVTY
Trigger: ATATGTCACAGAGGGCACCACTGAGAACTGCGTGCATAGGACCTCAAAATACAAAATTAGCAGGGCCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp GTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTaGGAATGGTACAGGTATTTCTTTGTTCCACCAGAT +
Preference number: 3 (lower is better)
Translates to: VSIPRRWLSKSK*EWYRYFFVPPD
Trigger: ATCTGGTGGAACAAAGAAATACCTGTACCATTCCCACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR CAA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACTTGACTCAGGGCCCTTaGGCACCATCAGTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYLTQGP*APSVQK
Trigger: TTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAA...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGCAGTTACCAACACCTaGCCTGCAGTGTCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKAVTNT*PAVSSV
Trigger: TACACTGGACACTGCAGGCAAGGTGTTGGTAACTGC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR GCA 72 bp TTCTCTGAAAAGGAAGGAGACACTCTACATGTAATTTaGCACTTCATAGCAAAGGAACCATTAAGCCCACAG +
Preference number: 3 (lower is better)
Translates to: FSEKEGDTLHVI*HFIAKEPLSPQ
Trigger: CTGTGGGCTTAATGGTTCCTTTGCTATGAAGTGGCAAATTACATGTAGAGTGTCTCCTTCCTTTTCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp ATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGGGAATaGTACAGGTATTTCTTTGTTCCACCAGATATGTAT +
Preference number: 3 (lower is better)
Translates to: IPRRWLSKSKWE*YRYFFVPPDMY
Trigger: ATACATATCTGGTGGAACAAAGAAATACCTGTACCATTCCCACTTGCTCTTTGATAGCCACCTCCTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR-3UTR CAA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACTTTTCCACTCCACCCTaGGCTATCCTTTTGACTCAG +
Preference number: 3 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYFSTPP*AILLTQ
Trigger: CTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAA...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR TCA 72 bp ACACACCCATTTTCAAGTGCCTGCTATTTAGTATGTTaGGGATTCCTATTAATTGTGGTTGATCCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: THPFSSACYLVC*GFLLIVVDPSY
Trigger: GTAGCTGGGATCAACCACAATTAATAGGAATCCTCAACATACTAAATAGCAGGCACTTGAAAATGGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR TCA 72 bp GTTCAGAGGGCACCAATGAAAGATGTGAGCAACGGATaGACTCCTTGTTTATTAACAGAATTTACAGACTTC +
Preference number: 3 (lower is better)
Translates to: VQRAPMKDVSNG*TPCLLTEFTDF
Trigger: GAAGTCTGTAAATTCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTCTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTAAAAGCACAGAAATGTaGGTATGTGAAGAAGCCCAG +
Preference number: 3 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLKSTEM*VCEEAQ
Trigger: CTGGGCTTCTTCACATACCAACATTTCTGTGCTTTT...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR TCA 72 bp AATCAAAATGAATTTCCGATAGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTCACAAACAGATTAGTG +
Preference number: 3 (lower is better)
Translates to: NQNEFPIVRRVE*GNGYSLTNRLV
Trigger: CACTAATCTGTTTGTGAGGGAATATCCATTCCCTCACTCTACTCTCCTCACTATCGGAAATTCATTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR-3UTR CAA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTGCACAATGTAACCATTaGGTTTTTACTTGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLAQCNH*VFTCSS
Trigger: GGAGGAACAAGTAAAAACCAAATGGTTACATTGTGC...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR TCA 72 bp ACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTaGAATATGGAAGCCCCACGTATTACACCAAATTTA +
Preference number: 3 (lower is better)
Translates to: TIYRLQRRKLPL*NMEAPRITPNL
Trigger: TAAATTTGGTGTAATACGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CCA 72 bp AAATTAGAGTCAAACCTCCAGGTACTAAAATTTTACTaGCCTTATAATCAGCAGTACCTGTGGCTAATGATA +
Preference number: 3 (lower is better)
Translates to: KLESNLQVLKFY*PYNQQYLWLMI
Trigger: TATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAGGTTTGACTCTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCTGGGGCTGCCGGCTaGTCGTGGCCGCAGCGTTGG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSGAAG*SWPQRW
Trigger: CCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCCTCCCCACCCCCAGTaGTCTGGGATCAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIPPHPQ*SGIRPN
Trigger: GTTGGGCCTGATCCCAGAGCACTGGGGGTGGGGAGG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCACCAGGCTCCCGGTaGTGGGACGAGCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSPGSR*WDEPLA
Trigger: CGCCAGCGGCTCGTCCCAGCACCGGGAGCCTGGTGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCCGGGGCTCCTTCTGTaGTCGCCGCCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELPGLLL*SPPSPG
Trigger: GCCTGGTGAGGGCGGCGAGCACAGAAGGAGCCCCGG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTGGGGCGACCCAGGTaGGCGTCCCTGAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLGRPR*ASLNSE
Trigger: CTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGCTCCCCAGCGCTGCTaGACCAGAAATTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVAPQRC*TRNSGV
Trigger: CACCCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTGGGGGTCCCAGGATaGTGGGGAATCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVGVPG*WGILFA
Trigger: AGCGAAGAGGATTCCCCAGCATCCTGGGACCCCCAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCTGTGTGCCACTCATTaGGGCCCTTGGCGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVLCATH*GPWREV
Trigger: GACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGTTGTCATGACGGCTTaGTCTCCGTGGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSVVMTA*SPWGSQ
Trigger: CTGGGACCCCCACGGAGACCAAGCCGTCATGACAAC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGAAATCCGCGCGCAGTaGGAAGGGGACCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELEIRAQ*EGDPGL
Trigger: GAGTCCCGGGTCCCCTTCCCACTGCGCGCGGATTTC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGGGTGCCAGTCCCACTaGATCCCGTGGAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSGCQSH*IPWSKR
Trigger: TCTTTTGCTCCACGGGATTCAGTGGGACTGGCACCC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGGGTGCCAGTCCCACTaGATCCCGTGGAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQGCQSH*IPWSKR
Trigger: TCTTTTGCTCCACGGGATTCAGTGGGACTGGCACCC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCTTGTCTGTGAGGGCTaGTCCAGCCAGCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQLVCEG*SSQPLA
Trigger: TGCCAAAGGCTGGCTGGATCAGCCCTCACAGACAAG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGATTCCACAGCAGGGATaGCTGTCATGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQIPQQG*LSWAAG
Trigger: CCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAAT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCATAGCTCCCCAGCGCTaGTGGACCAGAAATTCGGGG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIIAPQR*WTRNSG
Trigger: CCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGCTAT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCGGCAAGTGGAATCTaGGGCGACCCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSASGI*GDPGGR
Trigger: ACGCCCACCTGGGTCGCCCCAGATTCCACTTGCCGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGTTGCTGCTGGTGGGTaGATTCCACAGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVVAAGG*IPQQGC
Trigger: GCATCCCTGCTGTGGAATCCACCCACCAGCAGCAAC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGCTCCCCAGCGCTGCTaGACCAGAAATTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELAPQRC*TRNSGV
Trigger: CACCCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGCGTCCCTGAACAGTaGGAGCTACATAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGVPEQ*ELHRNQ
Trigger: CTGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCACTACAGCTCCATCCTaGGCAGAGCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSTTAPS*AEPVAL
Trigger: CAAAGCCACAGGCTCTGCTCAGGATGGAGCTGTAGT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCTGTCTGCGGCCCCTaGGAGGCTGTTCTGTATCTT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSVCGP*EAVLYL
Trigger: AAGATACAGAACAGCCTCTCAGGGGCCGCAGACAGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCTTGTCTGTGAGGGCTaGTCCAGCCAGCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKLVCEG*SSQPLA
Trigger: TGCCAAAGGCTGGCTGGATCAGCCCTCACAGACAAG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCTGAGTGCTTGTCTGTaGGGGCTGATCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLSACL*GLIQPA
Trigger: GGCTGGCTGGATCAGCCCTCACAGACAAGCACTCAG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGGAGCCAGGATGTGGTaGGACACGGCCGATACTCCA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELGARMW*DTADTP
Trigger: TGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAGCCCATCCACTCTCTaGCCACACCACCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSPSTL*PHHLGT
Trigger: TGTGCCCAGGTGGTGTGGTCAGAGAGTGGATGGGCT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTTCTGGAGCTGGTGTaGGCAGTTCTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLLELV*AVLPSP
Trigger: TGGTGAAGGCAGAACTGCTCACACCAGCTCCAGAAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATCCCGCGGCCCGAGGTaGCAGGGACCCGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRSRGPR*QGPGSL
Trigger: GAGAGACCCGGGTCCCTGTCACCTCGGGCCGCGGGA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCTCCCCACCCCCAGTaGTCTGGGATCAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPPHPQ*SGIRPN
Trigger: GTTGGGCCTGATCCCAGAGCACTGGGGGTGGGGAGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGATTCCACAGCAGGGATaGCTGTCATGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKIPQQG*LSWAAG
Trigger: CCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAAT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGATAGCTCCCCAGCGCTaGTGGACCAGAAATTCGGGG +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKIAPQR*WTRNSG
Trigger: CCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGCTAT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCTGTCACACTCTCTCTaGATCCACACTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVLSHSL*IHTGAR
Trigger: CCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTGTCACACTCTCTCTaGATCCACACTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLSHSL*IHTGAR
Trigger: CCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCTGTGTGCCACTCATTaGGGCCCTTGGCGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLCATH*GPWREV
Trigger: GACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCGGCAAGTGGAATCTaGGGCGACCCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSASGI*GDPGGR
Trigger: ACGCCCACCTGGGTCGCCCCAGATTCCACTTGCCGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGTTGCTGCTGGTGGGTaGATTCCACAGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKVAAGG*IPQQGC
Trigger: GCATCCCTGCTGTGGAATCCACCCACCAGCAGCAAC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGAATGTTGCTGCTGGTaGGTGGATTCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIECCCW*VDSTAG
Trigger: CCCTGCTGTGGAATCCACCCACCAGCAGCAACATTC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCCACTCTGGGCACCTTaGGACTTGACTAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIPLWAP*DLTNPR
Trigger: CCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCTGGATTGTCTCCACTaGCCGTCAGCCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQILDCLH*PSAQIH
Trigger: ATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTGGATTGTCTCCACTaGCCGTCAGCCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLDCLH*PSAQIH
Trigger: ATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTGTTTCTGCCTCACTaGCTGTTAGGGTGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLFLPH*LLGCPL
Trigger: TAGGGGACACCCTAACAGTCAGTGAGGCAGAAACAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGGACTTCCGACAAGTaGTTGAGTGTCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGTSDK*LSVSVL
Trigger: CAGGACACTGACACTCAATCACTTGTCGGAAGTCCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCTGCAAACCAGTGACTaGAATGCCATGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVLQTSD*NAMLLL
Trigger: GAGGAGCAGCATGGCATTTCAGTCACTGGTTTGCAG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTTTCAGAGTTCTGGATaGCACTGTCTGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVFQSSG*HCLSAA
Trigger: GGCCGCAGACAGACAGTGTCATCCAGAACTCTGAAA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTTGTCTGTGAGGGCTaGTCCAGCCAGCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLVCEG*SSQPLA
Trigger: TGCCAAAGGCTGGCTGGATCAGCCCTCACAGACAAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGAGCCAGGATGTGGTaGGACACGGCCGATACTCCA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGARMW*DTADTP
Trigger: TGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCCAGCCCGCATGGCTaGTCCATCTTCTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSSPHG*SIFFDR
Trigger: TCTGTCAAAGAAGATGGAGCAGCCATGCGGGCTGGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGAGAAGCATCTCCACTaGTACAGTCAGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQEKHLH*YSQSCP
Trigger: TGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGAGAAGCATCTCCACTaGTACAGTCAGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIEKHLH*YSQSCP
Trigger: TGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGAGGGTGTGGATAAGTaGTTAGGGTGGCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELEGVDK*LGWRAF
Trigger: GAAGGCGCGCCACCCTAAGCACTTATCCACACCCTC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCGACTAACAAGCTGCTaGCAGTTGGGTGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVRLTSC*QLGGSV
Trigger: GACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTATAGTGAAGCAAGGTaGTCCTCCCTTCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQYSEAR*SSLPRL
Trigger: GAGACGGGGAAGGGAGGAGCACCTTGCTTCACTATA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTATAGTGAAGCAAGGTaGTCCTCCCTTCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIYSEAR*SSLPRL
Trigger: GAGACGGGGAAGGGAGGAGCACCTTGCTTCACTATA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCATCAAGACCCCCTTCTaGCTCCATGGTAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIIKTPF*LHGRHL
Trigger: GAGATGCCTACCATGGAGCCAGAAGGGGGTCTTGAT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCAACCTCCTCATCTGTaGAACTCTCCTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVQPPHL*NSPALG
Trigger: ACCCAGTGCAGGAGAGTTCCACAGATGAGGAGGTTG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACCTCCTCATCTGTaGAACTCTCCTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIQPPHL*NSPALG
Trigger: ACCCAGTGCAGGAGAGTTCCACAGATGAGGAGGTTG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSLHPH*SQDVVR
Trigger: TCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQISLHPH*SQDVVR
Trigger: TCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCACGTGCTTCTGGAGCTaGTGTGAGCAGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSTCFWS*CEQFCL
Trigger: AAGGCAGAACTGCTCACACCAGCTCCAGAAGCACGT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCAGAGGACGTGCTTCTaGAGCTGGTGTGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKQRTCF*SWCEQF
Trigger: GAACTGCTCACACCAGCTCCAGAAGCACGTCCTCTG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCGAGTCAGTCCAGAGTaGGTCGAGCTAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIRVSPE*VELERN
Trigger: ATTTCTCTCTAGCTCGACTCACTCTGGACTGACTCG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGATGCTCCAGGTGAATaGGGAGATGTCATGATGGGA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVDAPGE*GDVMMG
Trigger: TCCCATCATGACATCTCCTCATTCACCTGGAGCATC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGATGCTCCAGGTGAATaGGGAGATGTCATGATGGGA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQDAPGE*GDVMMG
Trigger: TCCCATCATGACATCTCCTCATTCACCTGGAGCATC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAACTGCTCTTGCAGCTaGGGAATGTGTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVNCSCS*GMCFLA
Trigger: GGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCAACTTGGCAGAGTCCTaGGGTTCAGGACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQINLAES*GSGLTD
Trigger: ATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGAAAAAGAGGCCCCTaGAGCTACAGAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGKRGP*SYRRHG
Trigger: TCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCAGATCACGTACCTCTaGTTTCCCAGAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQQITYL*FPRGTQ
Trigger: CTGAGTACCTCTGGGAAATCAGAGGTACGTGATCTG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCAGATCACGTACCTCTaGTTTCCCAGAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVQITYL*FPRGTQ
Trigger: CTGAGTACCTCTGGGAAATCAGAGGTACGTGATCTG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTTCGGGGGTGAATGGTaGAATTGCCCCATCGGAGTG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQFGGEW*NCPIGV
Trigger: CACTCCGATGGGGCAATTTCACCATTCACCCCCGAA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCCAGAAATTCGGGGGTaGATGGTGAAATTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVPEIRG*MVKLPH
Trigger: ATGGGGCAATTTCACCATTCACCCCCGAATTTCTGG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGGCAGCTGCCACACTGTaGAGAACTAGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQAAATL*RTSPTL
Trigger: CAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGC...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSVRRVE*GNGYSL
Trigger: GAGGGAATATCCATTCCCTCACTCTACTCTCCTCAC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTTCTGGAGCTGGTGTaGGCAGTTCTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLLELV*AVLPSP
Trigger: TGGTGAAGGCAGAACTGCTCACACCAGCTCCAGAAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCTGCCAGCACTGTCATaGAGGTTTAGCCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQLPALS*RFSLVA
Trigger: AGCAACAAGGCTAAACCTTCATGACAGTGCTGGCAG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTGCTACAGTCAGTCCTaGCCAGTACATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVCYSQS*PVHLQD
Trigger: ATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGACTCTTGGGACTATCTaGATTGTCACTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQTLGTI*IVTTGP
Trigger: CGGCCCAGTAGTGACAATGCAGATAGTCCCAAGAGT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCATCCGACCCCGTTTGTaGTCCAAATTTCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSIRPRL*SKFRGS
Trigger: AGAGCCTCGAAATTTGGAGCACAAACGGGGTCGGAT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGAGGGTGTGGATAAGTaGTTAGGGTGGCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVEGVDK*LGWRAF
Trigger: GAAGGCGCGCCACCCTAAGCACTTATCCACACCCTC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGATGCCTGTCATGGGCTaGAGGGTAAGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKMPVMG*RVSEEA
Trigger: TGCTTCCTCACTTACCCTGCAGCCCATGACAGGCAT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCCAAATCCAACAACCTaGAGTCACCTCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIPNPTT*SHLQDM
Trigger: CATGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTACCAACACCTTGCCTaGAGTGTCCAGTGTATGTGC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVYQHLA*SVQCMC
Trigger: GCACATACACTGGACACTGCAGGCAAGGTGTTGGTA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCTGCATTGTCACTACTaGGCCGAGAAGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKLHCHY*AEKHLH
Trigger: GTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGGGTCCCAGGATGCTaGGGAATCCTCTTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGVPGC*GILFAS
Trigger: GGAAGCGAAGAGGATTCCCCAGCATCCTGGGACCCC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCAAGCTGCTGCCAGTTaGGTGGATCTGTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSQAAAS*VDLSLS
Trigger: ACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCTGACAACTTCAGGCTaGAGGTATCAAGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKLTTSG*RYQGDA
Trigger: AGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTCAG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGGAACTCTCCTGCACTaGGTCATAGCCATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVGTLLH*VIAIKD
Trigger: ATCCTTGATGGCTATGACCCAGTGCAGGAGAGTTCC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGGAACTCTCCTGCACTaGGTCATAGCCATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSGTLLH*VIAIKD
Trigger: ATCCTTGATGGCTATGACCCAGTGCAGGAGAGTTCC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGGAATGTTGCTGCTGGTaGGTGGATTCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQECCCW*VDSTAG
Trigger: CCCTGCTGTGGAATCCACCCACCAGCAGCAACATTC...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGGAGAATGTTGCTGCTaGTGGGTGGATTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKGECCC*WVDSTA
Trigger: TGCTGTGGAATCCACCCACCAGCAGCAACATTCTCC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTTAGCAGTTGGCACCTaGAAATGGTGGGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLAVGT*KWWGRL
Trigger: AAGCCTTCCCCACCATTTCCAGGTGCCAACTGCTAA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTTAGCAGTTGGCACCTaGAAATGGTGGGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQILAVGT*KWWGRL
Trigger: AAGCCTTCCCCACCATTTCCAGGTGCCAACTGCTAA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp TGTGAAGAACTAGTCCCACTCTGGGCACCTTGGGACTaGACTAATCCCAGGTGGTTCACAGGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: CEELVPLWAPWD*TNPRWFTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGGGACTAGTTCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp ACCCTCAGAGAAGCAGCCTACTGGACAGCAGAGAGCTaGGAATACTGTATAGTGAAGCAAGGTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLREAAYWTAES*EYCIVKQGAPP
Trigger: GGGAGGAGCACCTTGCTTCACTATACAGTATTCCAAGCTCTCTGCTGTCCAGTAGGCTGCTTCTCTGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCTCCCAAAACGAACTaGGAAAGCCAGGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSPKTN*ESQGAS
Trigger: ACTCGCTCCCTGGCTTTCTCAGTTCGTTTTGGGAGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCATATGTCCAATGACTaGCGGCTCTACTTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIHMSND*RLYFRV
Trigger: GACTCTGAAGTAGAGCCGTCAGTCATTGGACATATG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGAGACATATGTCCAATaGCTGACGGCTCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIETYVQ*LTALLQ
Trigger: CTGAAGTAGAGCCGTCAGTCATTGGACATATGTCTC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGCAGATCCTCAGGAATaGGCTCAGGTCTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSADPQE*AQVFSF
Trigger: AAAAGAGAAGACCTGAGCTCATTCCTGAGGATCTGC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTGCAAACCAGTGACTaGAATGCCATGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLQTSD*NAMLLL
Trigger: GAGGAGCAGCATGGCATTTCAGTCACTGGTTTGCAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCTGCAAACCAGTGACTaGAATGCCATGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLQTSD*NAMLLL
Trigger: GAGGAGCAGCATGGCATTTCAGTCACTGGTTTGCAG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTTTCAGAGTTCTGGATaGCACTGTCTGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQFQSSG*HCLSAA
Trigger: GGCCGCAGACAGACAGTGTCATCCAGAACTCTGAAA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQICFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAGCATACCTTTGAGGTaGCCCTCAGAGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSIPLR*PSEKQP
Trigger: AGGCTGCTTCTCTGAGGGTCACCTCAAAGGTATGCT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCCAGCCCGCATGGCTaGTCCATCTTCTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSSPHG*SIFFDR
Trigger: TCTGTCAAAGAAGATGGAGCAGCCATGCGGGCTGGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTGACGACAGTGATCTaGAGCTTTCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLTTVI*SFLHLL
Trigger: GAGAAGGTGAAGAAAGCTGCAGATCACTGTCGTCAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGCGCTGCTTGTTTTCTaGCTCCTTGACAGCCTGATT +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKALLVF*LLDSLI
Trigger: AATCAGGCTGTCAAGGAGGCAGAAAACAAGCAGCGC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTCAAACCTAGCTGTTaGACCAGCAACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVKPSC*TSNCFN
Trigger: GTTGAAGCAGTTGCTGGTGCAACAGCTAGGTTTGAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATGCCTGTCATGGGCTaGAGGGTAAGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQMPVMG*RVSEEA
Trigger: TGCTTCCTCACTTACCCTGCAGCCCATGACAGGCAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTCACCTCCAGGACATaGGGCTCTAACTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVTSRT*GSNFYL
Trigger: CAGATAAAAGTTAGAGCCGCATGTCCTGGAGGTGAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGTCACCTCCAGGACATaGGGCTCTAACTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSVTSRT*GSNFYL
Trigger: CAGATAAAAGTTAGAGCCGCATGTCCTGGAGGTGAC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCAGTTACCAACACCTTaGCTGCAGTGTCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSQLPTP*LQCPVY
Trigger: ATACACTGGACACTGCAGGCAAGGTGTTGGTAACTG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCAGTTACCAACACCTTaGCTGCAGTGTCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVQLPTP*LQCPVY
Trigger: ATACACTGGACACTGCAGGCAAGGTGTTGGTAACTG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTCTCTATCTGGGGCTaGCGGCTGCTCGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLSIWG*RLLVAA
Trigger: TGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCAAAATGCAGCCTGCTTaGTCTGGGAAGGTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIKMQPA*SGKVAF
Trigger: GAAAGCTACCTTCCCAGAGCAAGCAGGCTGCATTTT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACTGGGGCGACCCAGGTaGGCGTCCCTGAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLGRPR*ASLNSE
Trigger: CTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTTTTGGGCCACTCTTaGGACTATCTGCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLLGHS*DYLHCH
Trigger: GTGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCACTCTGGCGCAACTTaGCAGAGTCCTGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVHSGAT*QSPEVQ
Trigger: CTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCTTTCGAAAGGGCTTTaGTGTCCCATGTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQILSKGL*CPMFSH
Trigger: GTGACTGAACATGGGACACCAAAGCCCTTTCGAAAG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTCCCAAATCTCTGTCTaGACTCTGCAAACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSQISV*TLQTSD
Trigger: GTCACTGGTTTGCAGAGTCCAGACAGAGATTTGGGA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCCCAAATCTCTGTCTaGACTCTGCAAACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSQISV*TLQTSD
Trigger: GTCACTGGTTTGCAGAGTCCAGACAGAGATTTGGGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCAAAATGTTACTTGCCTaGCTATCCTGGGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIKMLLA*LSWGAS
Trigger: ACTGGCACCCCAGGATAGCCAGGCAAGTAACATTTT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCATGGTAGGCATCTCTaGGGTCATAATCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVHGRHL*GHNHVV
Trigger: GACCACATGATTATGACCCCAGAGATGCCTACCATG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCATGGTAGGCATCTCTaGGGTCATAATCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIHGRHL*GHNHVV
Trigger: GACCACATGATTATGACCCCAGAGATGCCTACCATG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCTCTGCATCCACACTaGAGCCAGGATGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSLHPH*SQDVVR
Trigger: TCTCACCACATCCTGGCTCCAGTGTGGATGCAGAGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQLTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVLTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTTGACTAATCCCAGGTaGTTCACAGGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQILTNPR*FTGRSS
Trigger: AGAGGATCTGCCTGTGAACCACCTGGGATTAGTCAA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCCACTCTGGGCACCTTaGGACTTGACTAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVPLWAP*DLTNPR
Trigger: CCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTTCGTGGCCGCAGCGTTaGCCGCGTCTCCGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLSWPQR*PRLRPS
Trigger: GGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGA...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGCTGCCGGCTGCTCGTaGCCGCAGCGTTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFAAGCS*PQRWPR
Trigger: ACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGACTCCCGCCGGGGCTaGGGCGGGATCAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFDSRRG*GGISSR
Trigger: CCGTGAGCTGATCCCGCCCCAGCCCCGGCGGGAGTC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCGAGTCAGTCCAGAGTaGGTCGAGCTAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELRVSPE*VELERN
Trigger: ATTTCTCTCTAGCTCGACTCACTCTGGACTGACTCG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCTGGATTGTCTCCACTaGCCGTCAGCCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLDCLH*PSAQIH
Trigger: ATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCCCAGATGCTCCAGGTaGATGAGGAGATGTCATGAT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELPRCSR*MRRCHD
Trigger: ATCATGACATCTCCTCATTCACCTGGAGCATCTGGG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAACTGCTCTTGCAGCTaGGGAATGTGTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELNCSCS*GMCFLA
Trigger: GGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGATTGCTCCTTCACTaGTGCAGCCATCCGACAGAT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGLLLH*CSHPTD
Trigger: ATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTCTGTCTGCGGCCCCTaGGAGGCTGTTCTGTATCTT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILSVCGP*EAVLYL
Trigger: AAGATACAGAACAGCCTCTCAGGGGCCGCAGACAGA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTGCTCCATCACCTTCTaGTGGATTCTCATCACTATG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVCSITF*WILITM
Trigger: CATAGTGATGAGAATCCATCAGAAGGTGATGGAGCA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGCTCCATCACCTTCTaGTGGATTCTCATCACTATG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQICSITF*WILITM
Trigger: CATAGTGATGAGAATCCATCAGAAGGTGATGGAGCA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCCAGAAATTCGGGGGTaGATGGTGAAATTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELPEIRG*MVKLPH
Trigger: ATGGGGCAATTTCACCATTCACCCCCGAATTTCTGG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKCFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGCATAGCATACCTTTaGGGTGACCCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGIAYL*GDPQRS
Trigger: GCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCTTGGCTATCCTTTTaGCTCAGGGCCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPWLSF*LRALWH
Trigger: GTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAGAAAGCTTCCACTTTaGAATATGGAAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVRKLPL*NMEAPR
Trigger: ACGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGAGAAAGCTTCCACTTTaGAATATGGAAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQRKLPL*NMEAPR
Trigger: ACGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGAGAAATGTTGGTATGTaGAGAAGCCCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQRNVGM*RSPALG
Trigger: CCCCAGTGCTGGGCTTCTTCACATACCAACATTTCT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGAGAAGCATCTCCACTaGTACAGTCAGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVEKHLH*YSQSCP
Trigger: TGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGTCCTTGTCTCGCTCTaGATCAAGTTTAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKVLVSL*IKFSQL
Trigger: GAGCTGACTAAACTTGATGCAGAGCGAGACAAGGAC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGGCAACAATCTGTTCTaGACATGTCCGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELGNNLF*TCPLLL
Trigger: GAGAAGGAGCGGACATGTGCAGAACAGATTGTTGCC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGTCAAACCTAGCTGTTaGACCAGCAACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKVKPSC*TSNCFN
Trigger: GTTGAAGCAGTTGCTGGTGCAACAGCTAGGTTTGAC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGTCACCTCCAGGACATaGGGCTCTAACTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKVTSRT*GSNFYL
Trigger: CAGATAAAAGTTAGAGCCGCATGTCCTGGAGGTGAC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCCAAATCCAACAACCTaGAGTCACCTCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQPNPTT*SHLQDM
Trigger: CATGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGAAAATGCAGCCTGCTTaGTCTGGGAAGGTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKKMQPA*SGKVAF
Trigger: GAAAGCTACCTTCCCAGAGCAAGCAGGCTGCATTTT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCAACGGATGCGGCTTaGAGCAAAACAAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSTDAA*SKTSYL
Trigger: GAGATAACTTGTTTTGCTCCAAGCCGCATCCGTTGA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACCACCCCCAGTGCTCTaGGATCAGGCCCAACTCCGT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRPPPVL*DQAQLR
Trigger: ACGGAGTTGGGCCTGATCCCAGAGCACTGGGGGTGG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGACTCATTGGGGCCCTTaGCGAGAGGTCCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVTHWGP*REVLLL
Trigger: TAAAAGGAGGACCTCTCGCCAAGGGCCCCAATGAGT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCTTTTGGGCCACTCTTaGGACTATCTGCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKLLGHS*DYLHCH
Trigger: GTGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCAGAAGACATGGAATTaGCAGGCAGGTATCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQQKTWN*QAGIQR
Trigger: ACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCAAGCTACAGAAGACATaGAATTGGCAGGCAGGTATC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIKLQKT*NWQAGI
Trigger: GATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTCCTCCTCCTGCACTTaGTCTAATGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILSSSCT*SNGGGG
Trigger: CCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCAAGCTGCTGCCAGTTaGGTGGATCTGTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQQAAAS*VDLSLS
Trigger: ACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTCCAGGGCGAAAGGTTaGTTACTGCAAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKSRAKG*LLQKVA
Trigger: TGCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCTTCTCCCTTTCTGTTaGCCATTCTGTGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQLLPFC*PFCVFG
Trigger: GCCAAATACACAGAATGGCCAACAGAAAGGGAGAAG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGGCTGTTCTGTATCTTaGGAAATGTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSGCSVS*EMLPVF
Trigger: GAAGACTGGCAACATTTCCCAAGATACAGAACAGCC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAAGAGGAGGGACTCTaGATCTCAAAACAGGAATAC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIQEEGL*ISKQEY
Trigger: GTATTCCTGTTTTGAGATCCAGAGTCCCTCCTCTTG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCAAGAGGAGGGACTCTaGATCTCAAAACAGGAATAC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSQEEGL*ISKQEY
Trigger: GTATTCCTGTTTTGAGATCCAGAGTCCCTCCTCTTG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGCCTTTGGCAAAGAATaGTGTAACTTTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSAFGKE*CNFPPP
Trigger: AGGTGGAGGAAAGTTACACCATTCTTTGCCAAAGGC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGTCCAGTGTATGTGCTaGTCTGCAATTTTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVVQCMC*SAIFRV
Trigger: GACCCTAAAAATTGCAGACCAGCACATACACTGGAC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTCCCGGCTCTCTATCTaGGGCTGCCGGCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPSRLSI*GCRLLV
Trigger: CACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGGA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGGAGGAGCTATCTGTaGGGTCAAAATCATGTGATG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIWRSYL*GQNHVM
Trigger: CATCACATGATTTTGACCCCACAGATAGCTCCTCCA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGCACCTGGAAATGGTaGGGAAGGCTTCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGTWKW*GRLPSR
Trigger: CCTAGAAGGAAGCCTTCCCCACCATTTCCAGGTGCC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGATGATTACGCAACGCTaGACAAGACCTGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVMITQR*TRPVGS
Trigger: TGACCCCACAGGTCTTGTTCAGCGTTGCGTAATCAT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356641.7
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTGCTCCATCTTCTTTaGCAGACTGTACGAAGACTG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLLHLL*QTVRRL
Trigger: CAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAATGAGGAGATGTCATaGTGGGAGACATATGTCCAA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSNEEMS*WETYVQ
Trigger: TTGGACATATGTCTCCCATCATGACATCTCCTCATT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAACTGCTCTTGCAGCTaGGGAATGTGTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVNCSCS*GMCFLA
Trigger: GGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTGTTTCTGCCTCACTaGCTGTTAGGGTGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLFLPH*LLGCPL
Trigger: TAGGGGACACCCTAACAGTCAGTGAGGCAGAAACAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTCTTCCTCTACAGCCTaGGCAGTCATCAATACTTCT +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKSSSTA*AVINTS
Trigger: AGAAGTATTGATGACTGCTCAGGCTGTAGAGGAAGA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGAAAAAGAGGCCCCTaGAGCTACAGAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGKRGP*SYRRHG
Trigger: TCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAATCAAAGACAGTATTaGGAGTACGAGGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSNQRQY*EYEVCH
Trigger: ATGGCACACCTCGTACTCTCAATACTGTCTTTGATT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAGCAAAAGATTCAGTTaGAGTCCGTGGACTGTAACA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSKRFS*SPWTVT
Trigger: TGTTACAGTCCACGGACTTCAACTGAATCTTTTGCT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGAGCAAAAGATTCAGTTaGAGTCCGTGGACTGTAACA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSKRFS*SPWTVT
Trigger: TGTTACAGTCCACGGACTTCAACTGAATCTTTTGCT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTATGAATGTACTCCATaGTCTGGCTCTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVYECTP*SGSVNL
Trigger: CAGATTCACAGAGCCAGATCATGGAGTACATTCATA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTCAGCCTCTATCTTATaGATGTACTCCATGATCTGG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQISASIL*MYSMIW
Trigger: CCAGATCATGGAGTACATTCATAAGATAGAGGCTGA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTGAGTGCTTGTCTGTaGGGGCTGATCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLSACL*GLIQPA
Trigger: GGCTGGCTGGATCAGCCCTCACAGACAAGCACTCAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTGCTTCAGGAGCAGTTaGTCCTTGGGTGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELCFRSS*SLGVLK
Trigger: CTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTGCTCCCCATCCCTTTaGGGCCCGGACTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPCSPSL*GPDSSA
Trigger: TGCGGAAGAGTCCGGGCCTCAAAGGGATGGGGAGCA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGACTTTGGGGGCTTGCTaGTTTGCCTTGATTAACTGT +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKTLGAC*FALINC
Trigger: ACAGTTAATCAAGGCAAATCAGCAAGCCCCCAAAGT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGATGCGCTCAACTTTCTaGTTCTTATCTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVMRSTF*FLSVGD
Trigger: GTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCAT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCACATTCCTCCTCCTaGACTTGGTCTAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSHSSS*TWSNGG
Trigger: ACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAGCTTTGTTATCTGTTaGCACTTGTCGAACCAACAC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSFVIC*HLSNQH
Trigger: GTGTTGGTTCGACAAGTGGCAACAGATAACAAAGCT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTGTATGTTGTTCCTTTaGAAACTGTCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVCMLFL*KLSLSH
Trigger: GTGGCTGAGAGACAGTTTGCAAAGGAACAACATACA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTGGACTGTAACAAGTTaGAATGTCACCAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSWTVTS*NVTSSS
Trigger: ACTGGAACTGGTGACATTGCAACTTGTTACAGTCCA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTATGCCTGTCATGGGCTaGAGGGTAAGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILMPVMG*RVSEEA
Trigger: TGCTTCCTCACTTACCCTGCAGCCCATGACAGGCAT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCAGTTACCAACACCTTaGCTGCAGTGTCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQQLPTP*LQCPVY
Trigger: ATACACTGGACACTGCAGGCAAGGTGTTGGTAACTG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAGTAATTCAATGCTCTaGAAACAGCTGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSNSML*KQLHCP
Trigger: TGGACAGTGCAGCTGTTTCCAGAGCATTGAATTACT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTGCCTTTGAACTTCTaGATGGACTCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVPLNF*MDSFLH
Trigger: ATGCAAGAAAGAGTCCATCCAGAAGTTCAAAGGCAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGGGGTCCCAGGATGCTaGGGAATCCTCTTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRGVPGC*GILFAS
Trigger: GGAAGCGAAGAGGATTCCCCAGCATCCTGGGACCCC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTTTCGAAAGGGCTTTaGTGTCCCATGTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLSKGL*CPMFSH
Trigger: GTGACTGAACATGGGACACCAAAGCCCTTTCGAAAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGAAGACGACGACACAGTaGATTACTTTCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQKTTTQ*ITFSIL
Trigger: CAAGATGCTGAAAGTAATCCACTGTGTCGTCGTCTT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCACCTTCCAAACCAATaGCCCTTCATGAATCATCTT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQHLPNQ*PFMNHL
Trigger: AAGATGATTCATGAAGGGCCATTGGTTTGGAAGGTG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCATGGAATTGGCTTTGTaGATTGCTCCTTCACTGATG +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIMELAL*IAPSLM
Trigger: CATCAGTGAAGGAGCAATCCACAAAGCCAATTCCAT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCCCAAATCTCTGTCTaGACTCTGCAAACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSQISV*TLQTSD
Trigger: GTCACTGGTTTGCAGAGTCCAGACAGAGATTTGGGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCATGGTAGGCATCTCTaGGGTCATAATCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQHGRHL*GHNHVV
Trigger: GACCACATGATTATGACCCCAGAGATGCCTACCATG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCAACCTCCTCATCTGTaGAACTCTCCTGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILQPPHL*NSPALG
Trigger: ACCCAGTGCAGGAGAGTTCCACAGATGAGGAGGTTG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGCTCCCCAGCGCTGCTaGACCAGAAATTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMAPQRC*TRNSGV
Trigger: CACCCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAGTAGAGTGAGGGAATaGATATTCCCTCACAAACAG +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSRVRE*IFPHKQ
Trigger: CTGTTTGTGAGGGAATATCCATTCCCTCACTCTACT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp CTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTaGCCTGCAGTGTCCAGTGTATGTGCTGGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLFILEQAVTNT*PAVSSVCAGLQ
Trigger: TTGCAGACCAGCACATACACTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGGGGTCAAAATCATGTaGTGCAATGCGCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELGVKIM*CNALNF
Trigger: AAAGTTGAGCGCATTGCATCACATGATTTTGACCCC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCATAGGAACCAGATTTaGTTAGCTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELHRNQI*LASPPP
Trigger: TGGAGGTGGTGAAGCTAATCAAATCTGGTTCCTATG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCCAGATGCTCCAGGTaGATGAGGAGATGTCATGAT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPRCSR*MRRCHD
Trigger: ATCATGACATCTCCTCATTCACCTGGAGCATCTGGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGAAAAAGAGGCCCCTaGAGCTACAGAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGKRGP*SYRRHG
Trigger: TCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTGTTCATCCTCACTTTaGCTTTCTCCAAAAGCTACA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSCSSSL*LSPKAT
Trigger: TGTAGCTTTTGGAGAAAGTCAAAGTGAGGATGAACA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGTAAGCCTTTGCATTTaGGTGGGAATAATATCCTTC +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVVSLCI*VGIISF
Trigger: GAAGGATATTATTCCCACTCAAATGCAAAGGCTTAC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGCCAGAATCTTACTATaGCACCTTAAAACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQARILL*HLKTSL
Trigger: TAGACTGGTTTTAAGGTGTCATAGTAAGATTCTGGC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGCTCCATCACCTTCTaGTGGATTCTCATCACTATG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQCSITF*WILITM
Trigger: CATAGTGATGAGAATCCATCAGAAGGTGATGGAGCA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGGGCTGCAGGGTAAGTaGGGAAGCAACCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRGLQGK*GSNLLI
Trigger: GATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCTCAAATTACAATTCTaGAACTTACCCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQLKLQF*NLPSVG
Trigger: CCCTACAGAGGGTAAGTTTCAGAATTGTAATTTGAG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGGACAAGACACTGGCTaGACTAGAGAAACTGAAATT +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKGQDTG*TRETEI
Trigger: AATTTCAGTTTCTCTAGTTCAGCCAGTGTCTTGTCC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGCTAATTTTGTATTTTaGGGTCCTATGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIANFVF*GPMHAV
Trigger: AACTGCGTGCATAGGACCTCAAAATACAAAATTAGC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTACTCTTGGGACTATCTaGATTGTCACTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILTLGTI*IVTTGP
Trigger: CGGCCCAGTAGTGACAATGCAGATAGTCCCAAGAGT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGAAACTCAAGGAAGATaGGACGAGTTTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVETQGR*DEFLWN
Trigger: ATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGTCCTTGTCTCGCTCTaGATCAAGTTTAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVVLVSL*IKFSQL
Trigger: GAGCTGACTAAACTTGATGCAGAGCGAGACAAGGAC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTATCCGACCCCGTTTGTaGTCCAAATTTCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILIRPRL*SKFRGS
Trigger: AGAGCCTCGAAATTTGGAGCACAAACGGGGTCGGAT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGAGGGTGTGGATAAGTaGTTAGGGTGGCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINREGVDK*LGWRAF
Trigger: GAAGGCGCGCCACCCTAAGCACTTATCCACACCCTC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCTGACGACAGTGATCTaGAGCTTTCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLTTVI*SFLHLL
Trigger: GAGAAGGTGAAGAAAGCTGCAGATCACTGTCGTCAG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGCTATCAGCTGTAGATaGCAGAATCTTACTATGACA +
Preference number: 4 (lower is better)
Translates to: STPPLAILLTQGPLAPSVAISCR*QNLTMT
Trigger: TGTCATAGTAAGATTCTGGCATCTACAGCTGATAGC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTTCAGAAACTGTCTGTaGCACCAGTTCATAAATCTG +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQFRNCL*HQFINL
Trigger: CAGATTTATGAACTGGTGGCACAGACAGTTTCTGAA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCTCTGTCTGGACTCTaGAAACCAGTGACTGAAATG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSLSGL*KPVTEM
Trigger: CATTTCAGTCACTGGTTTGCAGAGTCCAGACAGAGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCTCTGTCTGGACTCTaGAAACCAGTGACTGAAATG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSLSGL*KPVTEM
Trigger: CATTTCAGTCACTGGTTTGCAGAGTCCAGACAGAGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGTTGCACCAGCAACTaGTTCAACAAACCCAAATTT +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQICCTSN*FNKPKF
Trigger: AAATTTGGGTTTGTTGAAGCAGTTGCTGGTGCAACA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTCTACCCAACTTCTaGATACTCCATCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSLPNF*ILHPDL
Trigger: GAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTACCAACACCTTGCCTaGAGTGTCCAGTGTATGTGC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILYQHLA*SVQCMC
Trigger: GCACATACACTGGACACTGCAGGCAAGGTGTTGGTA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCCACCCCCAGTGCTCTaGGATCAGGCCCAACTCCGT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAPPPVL*DQAQLR
Trigger: ACGGAGTTGGGCCTGATCCCAGAGCACTGGGGGTGG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAGACTGTACGAAGACTaGATTGTCTCCACTGACCGT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVRLYED*IVSTDR
Trigger: ACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCAGAGCCTGTGGCTTTaGATAACTGCTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILQSLWL*ITALAA
Trigger: AGCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCATAAATTCTCTCTTTTaGGCCACTCTTGGGACTATC +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIINSLF*ATLGTI
Trigger: GATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTAT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGTTGTCATGACGGCTTaGTCTCCGTGGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPVVMTA*SPWGSQ
Trigger: CTGGGACCCCCACGGAGACCAAGCCGTCATGACAAC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCCTTCTGTAGTTCCATaGCTCTGCCAATTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVPSVVP*LCQLHC
Trigger: ACAGTGCAATTGGCAGAGCCATGGAACTACAGAAGG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCACAGAATTCCTTCTCTaGATACTCGCTGATAGAACA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSTEFLL*ILADRT
Trigger: TGTTCTATCAGCGAGTATCCAGAGAAGGAATTCTGT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCAATTTCTCCTCTCCTaGTCCGCTGAACCATGTCAG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILQFLLS*SAEPCQ
Trigger: CTGACATGGTTCAGCGGACCAGGAGAGGAGAAATTG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGAAGACGACGACACAGTaGATTACTTTCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKKTTTQ*ITFSIL
Trigger: CAAGATGCTGAAAGTAATCCACTGTGTCGTCGTCTT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTTCTCCCTTTCTGTTaGCCATTCTGTGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLLPFC*PFCVFG
Trigger: GCCAAATACACAGAATGGCCAACAGAAAGGGAGAAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGCCTTTGGCAAAGAATaGTGTAACTTTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELAFGKE*CNFPPP
Trigger: AGGTGGAGGAAAGTTACACCATTCTTTGCCAAAGGC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGGAGGAGCTATCTGTaGGGTCAAAATCATGTGATG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQWRSYL*GQNHVM
Trigger: CATCACATGATTTTGACCCCACAGATAGCTCCTCCA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp AGCCATGAGGAAGCTGACTGTGAGGCCCTGCTAATTTaGTATTTTGAGGTCCTATGCACGCAGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHEEADCEALLI*YFEVLCTQFSV
Trigger: CACTGAGAACTGCGTGCATAGGACCTCAAAATACAAAATTAGCAGGGCCTCACAGTCAGCTTCCTCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGAGACATATGTCCAATaGCTGACGGCTCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILETYVQ*LTALLQ
Trigger: CTGAAGTAGAGCCGTCAGTCATTGGACATATGTCTC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTGCTCCAATAATATaGGGTGCTATACGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSAPII*GAIRVE
Trigger: CTCAACCCGTATAGCACCTCATATTATTGGAGCAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTTCCTCTACAGCCTaGGCAGTCATCAATACTTCT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSSSTA*AVINTS
Trigger: AGAAGTATTGATGACTGCTCAGGCTGTAGAGGAAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAATCAAAGACAGTATTaGGAGTACGAGGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELNQRQY*EYEVCH
Trigger: ATGGCACACCTCGTACTCTCAATACTGTCTTTGATT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTTTTCTGACGAGATTTaGTCATTTCCAGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELFSDEI*SFPGRK
Trigger: CTTTCGCCCTGGAAATGATCAAATCTCGTCAGAAAA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCGAGAATCCTTTTTCTaGCGAGATTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKRESFF*RDLIIS
Trigger: GGAAATGATCAAATCTCGTCAGAAAAAGGATTCTCG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTCTTGCACAAAAGTCTaGAATCGAGAATCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSCTKV*NRESFF
Trigger: GAAAAAGGATTCTCGATTTCAGACTTTTGTGCAAGA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTTAAATCCAAATTCCTaGGCTCTTCAACATTTGGGT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLNPNS*ALQHLG
Trigger: ACCCAAATGTTGAAGAGCTCAGGAATTTGGATTTAA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCTGAGTGCTTGTCTGTaGGGGCTGATCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIALSACL*GLIQPA
Trigger: GGCTGGCTGGATCAGCCCTCACAGACAAGCACTCAG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGAGCCAGGATGTGGTaGGACACGGCCGATACTCCA +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGARMW*DTADTP
Trigger: TGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGGCACCTTGGGACTTaGCTAATCCCAGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGHLGT*LIPGGS
Trigger: TGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCCTATTAATTGTGGTTaGTCCCAGCTACAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQPINCG*SQLQRR
Trigger: TCTTCTCTGTAGCTGGGATCAACCACAATTAATAGG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTATTTACTTTTCTCCTaGTTAATTGCCCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQYLLFS*LIALDG
Trigger: ACCATCGAGGGCAATTAATCAGGAGAAAAGTAAATA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCTGTTAAAGAGTACATaGTTGTATGGTGAACAAGGA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQILLKST*LYGEQG
Trigger: TCCTTGTTCACCATACAATCATGTACTCTTTAACAG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGCTGGCCTACCTCACTaGACTTTATACTTAAAAATA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIAGLPH*TLYLKI
Trigger: TATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGATGCGCTCAACTTTCTaGTTCTTATCTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELMRSTF*FLSVGD
Trigger: GTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCAT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATGCGCTCAACTTTCTaGTTCTTATCTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQMRSTF*FLSVGD
Trigger: GTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGTGGGGGTCCCAGGATaGTGGGGAATCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAVGVPG*WGILFA
Trigger: AGCGAAGAGGATTCCCCAGCATCCTGGGACCCCCAC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTGACTGAAATGCCATaGTGCTCCTCTTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVTEMP*CSSFNF
Trigger: AAAATTAAAAGAGGAGCAGCATGGCATTTCAGTCAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGTATGTTGTTCCTTTaGAAACTGTCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQCMLFL*KLSLSH
Trigger: GTGGCTGAGAGACAGTTTGCAAAGGAACAACATACA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTGGACTGTAACAAGTTaGAATGTCACCAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELWTVTS*NVTSSS
Trigger: ACTGGAACTGGTGACATTGCAACTTGTTACAGTCCA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCATAGCTCCCCAGCGCTaGTGGACCAGAAATTCGGGG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPIAPQR*WTRNSG
Trigger: CCCCGAATTTCTGGTCCAGCAGCGCTGGGGAGCTAT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTGTCACACTCTCTCTaGATCCACACTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLSHSL*IHTGAR
Trigger: CCTGGCTCCAGTGTGGATGCAGAGAGAGTGTGACAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGCTACAGAGAAGAGGTaGTTGCCTCAGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASATEKR*LPQGGR
Trigger: CCTCCCGCCCTGAGGCAAGCACCTCTTCTCTGTAGC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAGACTGTACGAAGACTaGATTGTCTCCACTGACCGT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILRLYED*IVSTDR
Trigger: ACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTGGGGCGACCCAGGTaGGCGTCCCTGAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLGRPR*ASLNSE
Trigger: CTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTGTTTCTTGGCCTCTTaGATCTCTTTTAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSCFLAS*ISFSNL
Trigger: AAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTGTTTCTTGGCCTCTTaGATCTCTTTTAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQCFLAS*ISFSNL
Trigger: AAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAAGCTACAGAAGACATaGAATTGGCAGGCAGGTATC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVKLQKT*NWQAGI
Trigger: GATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTCCAGGGCGAAAGGTTaGTTACTGCAAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILSRAKG*LLQKVA
Trigger: TGCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATGGAATTGGCTTTGTaGATTGCTCCTTCACTGATG +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQMELAL*IAPSLM
Trigger: CATCAGTGAAGGAGCAATCCACAAAGCCAATTCCAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAGTAGAGTGAGGGAATaGATATTCCCTCACAAACAG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSRVRE*IFPHKQ
Trigger: CTGTTTGTGAGGGAATATCCATTCCCTCACTCTACT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAAAGCACAGAAATGTTaGTATGTGAAGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELKAQKC*YVKKPS
Trigger: GCTGGGCTTCTTCACATACCAACATTTCTGTGCTTT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAAGAGCAAGTGGGAATaGTACAGGTATTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSKSKWE*YRYFFV
Trigger: AACAAAGAAATACCTGTACCATTCCCACTTGCTCTT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAATGAGGAGATGTCATaGTGGGAGACATATGTCCAA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVNEEMS*WETYVQ
Trigger: TTGGACATATGTCTCCCATCATGACATCTCCTCATT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGGGACTTCCGACAAGTaGTTGAGTGTCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRGTSDK*LSVSVL
Trigger: CAGGACACTGACACTCAATCACTTGTCGGAAGTCCC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAAGAAAACAGCCAAATaGGCCGGGCGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILKKTAK*AGRDFS
Trigger: ACTAAAATCTCGCCCGGCTCATTTGGCTGTTTTCTT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTTCTAAGTGCCTTTaGACTTCTGGATGGACTCTT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSSKCL*TSGWTL
Trigger: AAGAGTCCATCCAGAAGTTCAAAGGCACTTAGAAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGGTAAGCCTTTGCATTTaGGTGGGAATAATATCCTTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELVSLCI*VGIISF
Trigger: GAAGGATATTATTCCCACTCAAATGCAAAGGCTTAC...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTGTTTTCTGCCTCCTTaGCAGCCTGATTTACATAAT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELCFLPP*QPDLHN
Trigger: ATTATGTAAATCAGGCTGTCAAGGAGGCAGAAAACA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGATTGCTCCTTCACTaGTGCAGCCATCCGACAGAT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGLLLH*CSHPTD
Trigger: ATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGGCTGCAGGGTAAGTaGGGAAGCAACCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGLQGK*GSNLLI
Trigger: GATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTCGGGGGTGAATGGTaGAATTGCCCCATCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMFGGEW*NCPIGV
Trigger: CACTCCGATGGGGCAATTTCACCATTCACCCCCGAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTATGAATGTACTCCATaGTCTGGCTCTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVYECTP*SGSVNL
Trigger: CAGATTCACAGAGCCAGATCATGGAGTACATTCATA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCAGCCTCTATCTTATaGATGTACTCCATGATCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSASIL*MYSMIW
Trigger: CCAGATCATGGAGTACATTCATAAGATAGAGGCTGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGCAGCTGCCACACTGTaGAGAACTAGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMAAATL*RTSPTL
Trigger: CAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGCATAGCATACCTTTaGGGTGACCCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGIAYL*GDPQRS
Trigger: GCTTCTCTGAGGGTCACCTCAAAGGTATGCTATGCC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCCTATTAATTGTGGTTaGTCCCAGCTACAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVPINCG*SQLQRR
Trigger: TCTTCTCTGTAGCTGGGATCAACCACAATTAATAGG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTCAAATTACAATTCTaGAACTTACCCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLKLQF*NLPSVG
Trigger: CCCTACAGAGGGTAAGTTTCAGAATTGTAATTTGAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGGAAACTCAAGGAAGATaGGACGAGTTTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQETQGR*DEFLWN
Trigger: ATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTC...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACGACTAACAAGCTGCTaGCAGTTGGGTGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRRLTSC*QLGGSV
Trigger: GACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCACCAGTCTATCATCCTaGTTTTGTAACAATACAAGA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQITSLSS*FCNNTR
Trigger: TCTTGTATTGTTACAAAAGCAGGATGATAGACTGGT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTTCAGAAACTGTCTGTaGCACCAGTTCATAAATCTG +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELFRNCL*HQFINL
Trigger: CAGATTTATGAACTGGTGGCACAGACAGTTTCTGAA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGACTGAAATGCCATGCTaGTCCTCTTTTAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQTEMPC*SSFNFE
Trigger: TTCAAAATTAAAAGAGGAGCAGCATGGCATTTCAGT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTCAGAGAAGAGGTGCTTaGCTCAGGGCGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLQRRGA*LRAGGS
Trigger: GCTTCCTCCCGCCCTGAGGCAAGCACCTCTTCTCTG...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGCTGAACAAGACCTGTaGGGTCAAAATCATGTGATG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILAEQDL*GQNHVM
Trigger: CATCACATGATTTTGACCCCACAGGTCTTGTTCAGC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356641.7
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATCGGCAAGTGGAATCTaGGGCGACCCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSASGI*GDPGGR
Trigger: ACGCCCACCTGGGTCGCCCCAGATTCCACTTGCCGA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTGCATTGTCACTACTaGGCCGAGAAGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLHCHY*AEKHLH
Trigger: GTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAGTAATTCAATGCTCTaGAAACAGCTGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSNSML*KQLHCP
Trigger: TGGACAGTGCAGCTGTTTCCAGAGCATTGAATTACT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTGCGACGAGTTTCTTTaGAATTGGTATGTTTATACA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSCDEFL*NWYVYT
Trigger: TGTATAAACATACCAATTCCAAAGAAACTCGTCGCA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGATACTTCTTCAATTTTaGCAACAATCTGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQILLQF*QQSVLH
Trigger: GTGCAGAACAGATTGTTGCCAAAATTGAAGAAGTAT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCCACTCTGGCGCAACTTaGCAGAGTCCTGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPHSGAT*QSPEVQ
Trigger: CTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTG...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACTGACAACTTCAGGCTaGAGGTATCAAGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLTTSG*RYQGDA
Trigger: AGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTCAG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCACCTTCCAAACCAATaGCCCTTCATGAATCATCTT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVHLPNQ*PFMNHL
Trigger: AAGATGATTCATGAAGGGCCATTGGTTTGGAAGGTG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGCTGTTCTGTATCTTaGGAAATGTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGCSVS*EMLPVF
Trigger: GAAGACTGGCAACATTTCCCAAGATACAGAACAGCC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGGGGTCATAATCATGTaGTCCATTACTAAAATGTTA +
Preference number: 4 (lower is better)
Translates to: SASTLEPGCGETRPILQIGVIIM*SITKML
Trigger: TAACATTTTAGTAATGGACCACATGATTATGACCCC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGGGGTCATAATCATGTaGTCCATTACTAAAATGTTA +
Preference number: 4 (lower is better)
Translates to: GCGETRPILQIQQPAVTSGVIIM*SITKML
Trigger: TAACATTTTAGTAATGGACCACATGATTATGACCCC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGAGAATGTTGCTGCTaGTGGGTGGATTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGECCC*WVDSTA
Trigger: TGCTGTGGAATCCACCCACCAGCAGCAACATTCTCC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAACGTGCTTCTGGAGCTaGTGTGAGCAGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRTCFWS*CEQFCL
Trigger: AAGGCAGAACTGCTCACACCAGCTCCAGAAGCACGT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp CTCTACCCAACTTCTGCATACTCCATCCTGACCTCTTaGCTTCAGGAGCAGTTGATCCTTGGGTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: LYPTSAYSILTS*LQEQLILGCTK
Trigger: TTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGCGTCCCTGAACAGTaGGAGCTACATAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGVPEQ*ELHRNQ
Trigger: CTGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAATGAGGAGATGTCATaGTGGGAGACATATGTCCAA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILNEEMS*WETYVQ
Trigger: TTGGACATATGTCTCCCATCATGACATCTCCTCATT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTACTTTCTGGTTATaGACCACATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSTFWL*TTLFSS
Trigger: GGAGGAAAACAATGTGGTTCATAACCAGAAAGTAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTCTTCTAAGTGCCTTTaGACTTCTGGATGGACTCTT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILSSKCL*TSGWTL
Trigger: AAGAGTCCATCCAGAAGTTCAAAGGCACTTAGAAGA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTCACTTCCTGTCTTTTaGTTTCACAAGGTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELSLPVF*FHKVLV
Trigger: GACTAAAACCTTGTGAAATCAAAAGACAGGAAGTGA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCTTGCACAAAAGTCTaGAATCGAGAATCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSCTKV*NRESFF
Trigger: GAAAAAGGATTCTCGATTTCAGACTTTTGTGCAAGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTTAAATCCAAATTCCTaGGCTCTTCAACATTTGGGT +
Preference number: 4 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLNPNS*ALQHLG
Trigger: ACCCAAATGTTGAAGAGCTCAGGAATTTGGATTTAA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGGATTGCTCCTTCACTaGTGCAGCCATCCGACAGAT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMGLLLH*CSHPTD
Trigger: ATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTTCAGAGTTCTGGATaGCACTGTCTGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMFQSSG*HCLSAA
Trigger: GGCCGCAGACAGACAGTGTCATCCAGAACTCTGAAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTTCGGGGGTGAATGGTaGAATTGCCCCATCGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAFGGEW*NCPIGV
Trigger: CACTCCGATGGGGCAATTTCACCATTCACCCCCGAA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGCAGCTGCCACACTGTaGAGAACTAGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASAAATL*RTSPTL
Trigger: CAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRVRRVE*GNGYSL
Trigger: GAGGGAATATCCATTCCCTCACTCTACTCTCCTCAC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCTGCATACTCCATCCTaGCCTCTTTGCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMLHTPS*PLCFRS
Trigger: GCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGCAG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGCATACCTTTGAGGTaGCCCTCAGAGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSIPLR*PSEKQP
Trigger: AGGCTGCTTCTCTGAGGGTCACCTCAAAGGTATGCT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCCTTGGCTATCCTTTTaGCTCAGGGCCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAPWLSF*LRALWH
Trigger: GTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGTTCCAAGGAGAAATTaGACTGCAGGGAAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILVPRRN*TAGKAN
Trigger: ATTTGCTTTCCCTGCAGTTCAATTTCTCCTTGGAAC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTCCAGCCCGCATGGCTaGTCCATCTTCTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSSPHG*SIFFDR
Trigger: TCTGTCAAAGAAGATGGAGCAGCCATGCGGGCTGGA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGGCAACAATCTGTTCTaGACATGTCCGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRGNNLF*TCPLLL
Trigger: GAGAAGGAGCGGACATGTGCAGAACAGATTGTTGCC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGATGAGAATAACATACTaGATGGTGGAGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELMRITY*MVELLS
Trigger: AGATAAGAGCTCCACCATGCAGTATGTTATTCTCAT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGTGGGGGTCCCAGGATaGTGGGGAATCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKVGVPG*WGILFA
Trigger: AGCGAAGAGGATTCCCCAGCATCCTGGGACCCCCAC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGCTATCAGCTGTAGATaGCAGAATCTTACTATGACA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVAISCR*QNLTMT
Trigger: TGTCATAGTAAGATTCTGGCATCTACAGCTGATAGC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCATTCCACAGCAGGGATaGCTGTCATGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFIPQQG*LSWAAG
Trigger: CCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAAT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACCAAATCCAACAACCTaGAGTCACCTCCAGGACATG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRPNPTT*SHLQDM
Trigger: CATGTCCTGGAGGTGACTGCAGGTTGTTGGATTTGG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGTGTTTCTTGGCCTCTTaGATCTCTTTTAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELCFLAS*ISFSNL
Trigger: AAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACA...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACAGAGCCTGTGGCTTTaGATAACTGCTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRQSLWL*ITALAA
Trigger: AGCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGATAAATTCTCTCTTTTaGGCCACTCTTGGGACTATC +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVINSLF*ATLGTI
Trigger: GATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTAT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGGGTCCCAGGATGCTaGGGAATCCTCTTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGVPGC*GILFAS
Trigger: GGAAGCGAAGAGGATTCCCCAGCATCCTGGGACCCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCACTCTGGCGCAACTTaGCAGAGTCCTGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAHSGAT*QSPEVQ
Trigger: CTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTTTGCTAACCCACTCTaGCGCAACTTGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPFANPL*RNLAES
Trigger: GGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACAGAAGACATGGAATTaGCAGGCAGGTATCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRQKTWN*QAGIQR
Trigger: ACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAAGACGACGACACAGTaGATTACTTTCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILKTTTQ*ITFSIL
Trigger: CAAGATGCTGAAAGTAATCCACTGTGTCGTCGTCTT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACGTTGCTGCTGGTGGGTaGATTCCACAGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYVAAGG*IPQQGC
Trigger: GCATCCCTGCTGTGGAATCCACCCACCAGCAGCAAC...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACTGCTCCATCTTCTTTaGCAGACTGTACGAAGACTG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLLHLL*QTVRRL
Trigger: CAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACACCTCCAGATGATTTaGATGAGTCACCAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRHLQMI*MSHQSS
Trigger: GGAACTCTGGTGACTCATTCAAATCATCTGGAGGTG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTGGCGTCCCTGAACAGTaGGAGCTACATAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLGVPEQ*ELHRNQ
Trigger: CTGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCC...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGATGCTCCAGGTGAATaGGGAGATGTCATGATGGGA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMDAPGE*GDVMMG
Trigger: TCCCATCATGACATCTCCTCATTCACCTGGAGCATC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTACTACAGCTCCATCCTaGGCAGAGCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLTTAPS*AEPVAL
Trigger: CAAAGCCACAGGCTCTGCTCAGGATGGAGCTGTAGT...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCACTACAGCTCCATCCTaGGCAGAGCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFTTAPS*AEPVAL
Trigger: CAAAGCCACAGGCTCTGCTCAGGATGGAGCTGTAGT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGGACTTCCGACAAGTaGTTGAGTGTCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGTSDK*LSVSVL
Trigger: CAGGACACTGACACTCAATCACTTGTCGGAAGTCCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGCAGATCCTCAGGAATaGGCTCAGGTCTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRADPQE*AQVFSF
Trigger: AAAAGAGAAGACCTGAGCTCATTCCTGAGGATCTGC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGCAGATCCTCAGGAATaGGCTCAGGTCTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRADPQE*AQVFSF
Trigger: AAAAGAGAAGACCTGAGCTCATTCCTGAGGATCTGC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTGTTTTCTGCCTCCTTaGCAGCCTGATTTACATAAT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILCFLPP*QPDLHN
Trigger: ATTATGTAAATCAGGCTGTCAAGGAGGCAGAAAACA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAACATTTGGGTACTCTaGCAACTTCAGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRNIWVL*QLQAGG
Trigger: ACCTCCAGCCTGAAGTTGTCAGAGTACCCAAATGTT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGGCTGCAGGGTAAGTaGGGAAGCAACCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGLQGK*GSNLLI
Trigger: GATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCCAGAAATTCGGGGGTaGATGGTGAAATTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMPEIRG*MVKLPH
Trigger: ATGGGGCAATTTCACCATTCACCCCCGAATTTCTGG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGGGCACCTTGGGACTTaGCTAATCCCAGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHGHLGT*LIPGGS
Trigger: TGAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACAAAGAGCTGCGGCAGTaGAGTCAGAGGACGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHKELRQ*SQRTCF
Trigger: GAAGCACGTCCTCTGACTTCACTGCCGCAGCTCTTT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGATGTGAGCAACGGATaGACTCCTTGTTTATTAACA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILDVSNG*TPCLLT
Trigger: TGTTAATAAACAAGGAGTTCATCCGTTGCTCACATC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTGCTACAGTCAGTCCTaGCCAGTACATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMCYSQS*PVHLQD
Trigger: ATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGCGCTGCTTGTTTTCTaGCTCCTTGACAGCCTGATT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMALLVF*LLDSLI
Trigger: AATCAGGCTGTCAAGGAGGCAGAAAACAAGCAGCGC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGACTGAAATGCCATGCTaGTCCTCTTTTAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELTEMPC*SSFNFE
Trigger: TTCAAAATTAAAAGAGGAGCAGCATGGCATTTCAGT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTTTGTTTTTACTTCCTaGTCAATCTGCAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILFVFTS*SICRDS
Trigger: ACTGTCCCTGCAGATTGAGCAGGAAGTAAAAACAAA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACAGCAACCCCCACCCCTaGCACTATCCGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHSNPHP*HYPKHF
Trigger: GAAATGCTTCGGATAGTGGCAGGGGTGGGGGTTGCT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTTTTTGGAATATATCTaGTTAGCAGTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILFLEYI*LAVGTW
Trigger: CCAGGTGCCAACTGCTAAGCAGATATATTCCAAAAA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAGACTGTACGAAGACTaGATTGTCTCCACTGACCGT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRRLYED*IVSTDR
Trigger: ACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCTGCATTGTCACTACTaGGCCGAGAAGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIALHCHY*AEKHLH
Trigger: GTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCCTCCTCCTGCACTTaGTCTAATGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSSSCT*SNGGGG
Trigger: CCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCAAGCTGCTGCCAGTTaGGTGGATCTGTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMQAAAS*VDLSLS
Trigger: ACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTACAGAATTCCTTCTCTaGATACTCGCTGATAGAACA +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILTEFLL*ILADRT
Trigger: TGTTCTATCAGCGAGTATCCAGAGAAGGAATTCTGT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCCAGGGCGAAAGGTTaGTTACTGCAAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSRAKG*LLQKVA
Trigger: TGCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGATTATCCAACAGAAGTaGGTACTTAGTAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVIIQQK*VLSKPL
Trigger: CAAAGGCTTACTAAGTACCCACTTCTGTTGGATAAT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAAAAATGTTACTTGCCTaGCTATCCTGGGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRKMLLA*LSWGAS
Trigger: ACTGGCACCCCAGGATAGCCAGGCAAGTAACATTTT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTACGTGCTTCTGGAGCTaGTGTGAGCAGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASTCFWS*CEQFCL
Trigger: AAGGCAGAACTGCTCACACCAGCTCCAGAAGCACGT...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACCAGAGGACGTGCTTCTaGAGCTGGTGTGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHQRTCF*SWCEQF
Trigger: GAACTGCTCACACCAGCTCCAGAAGCACGTCCTCTG...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAATGGCCAAAATGAAATaGAACGTGTGGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRMAKMK*NVWEAK
Trigger: CTTGGCCTCCCACACGTTCCATTTCATTTTGGCCAT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGGCACCTGGAAATGGTaGGGAAGGCTTCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHGTWKW*GRLPSR
Trigger: CCTAGAAGGAAGCCTTCCCCACCATTTCCAGGTGCC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGTTGGCACCTGGAAATaGTGGGGAAGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAVGTWK*WGRLPS
Trigger: AGAAGGAAGCCTTCCCCACCATTTCCAGGTGCCAAC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTATCAAAGAGCAAGTaGGAATGGTACAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLSKSK*EWYRYF
Trigger: GAAATACCTGTACCATTCCCACTTGCTCTTTGATAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATCCATTCCTAGGAGGTaGCTATCAAAGAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRSIPRR*LSKSKW
Trigger: CCACTTGCTCTTTGATAGCCACCTCCTAGGAATGGA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
3UTR CAA 72 bp GCATACTCCATCCTGACCTCTTTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAAGACAAAGGTCTAAAA +
Preference number: 4 (lower is better)
Translates to: AYSILTSLLQEQ*ILGCTKDKGLK
Trigger: TTTTAGACCTTTGTCTTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAAAGAGGTCAGGATGGAGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCTCCCAAAACGAACTaGGAAAGCCAGGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSPKTN*ESQGAS
Trigger: ACTCGCTCCCTGGCTTTCTCAGTTCGTTTTGGGAGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACATAGGAACCAGATTTaGTTAGCTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRHRNQI*LASPPP
Trigger: TGGAGGTGGTGAAGCTAATCAAATCTGGTTCCTATG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCTGCTCCAATAATATaGGGTGCTATACGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSAPII*GAIRVE
Trigger: CTCAACCCGTATAGCACCTCATATTATTGGAGCAGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAAAGAAAACAGCCAAATaGGCCGGGCGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRKKTAK*AGRDFS
Trigger: ACTAAAATCTCGCCCGGCTCATTTGGCTGTTTTCTT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCAACATTTGGGTACTCTaGCAACTTCAGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPNIWVL*QLQAGG
Trigger: ACCTCCAGCCTGAAGTTGTCAGAGTACCCAAATGTT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACCTTGGCTATCCTTTTaGCTCAGGGCCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKPWLSF*LRALWH
Trigger: GTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTGCTACAGTCAGTCCTaGCCAGTACATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIACYSQS*PVHLQD
Trigger: ATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGTCCTTGTCTCGCTCTaGATCAAGTTTAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPVLVSL*IKFSQL
Trigger: GAGCTGACTAAACTTGATGCAGAGCGAGACAAGGAC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGCAACAATCTGTTCTaGACATGTCCGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGNNLF*TCPLLL
Trigger: GAGAAGGAGCGGACATGTGCAGAACAGATTGTTGCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGACCAGTCTATCATCCTaGTTTTGTAACAATACAAGA +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVTSLSS*FCNNTR
Trigger: TCTTGTATTGTTACAAAAGCAGGATGATAGACTGGT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGTGACTGAAATGCCATaGTGCTCCTCTTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILVTEMP*CSSFNF
Trigger: AAAATTAAAAGAGGAGCAGCATGGCATTTCAGTCAC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTACCAACACCTTGCCTaGAGTGTCCAGTGTATGTGC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAYQHLA*SVQCMC
Trigger: GCACATACACTGGACACTGCAGGCAAGGTGTTGGTA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATATTTTGAGGTCCTATaGACGCAGTTCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRYFEVL*TQFSVV
Trigger: CACCACTGAGAACTGCGTGCATAGGACCTCAAAATA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGAGTTTCTTTGGAATTaGTATGTTTATACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVEFLWN*YVYTGL
Trigger: CAGACCTGTATAAACATACCAATTCCAAAGAAACTC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATCCTCCTCCTGCACTTaGTCTAATGGAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSSSCT*SNGGGG
Trigger: CCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACCACTCTGGGCACCTTaGGACTTGACTAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKPLWAP*DLTNPR
Trigger: CCTGGGATTAGTCAAGTCCCAAGGTGCCCAGAGTGG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATCTGACCACACCACCTaGGCACATAAGAGCCACACG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSDHTT*AHKSHT
Trigger: CGTGTGGCTCTTATGTGCCCAGGTGGTGTGGTCAGA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACAGAGGACGTGCTTCTaGAGCTGGTGTGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKQRTCF*SWCEQF
Trigger: GAACTGCTCACACCAGCTCCAGAAGCACGTCCTCTG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGTCCAGTGTATGTGCTaGTCTGCAATTTTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRVQCMC*SAIFRV
Trigger: GACCCTAAAAATTGCAGACCAGCACATACACTGGAC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCACAATGTAACCATTTaGTTTTTACTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVHNVTI*FLLVPP
Trigger: AGGAGGAACAAGTAAAAACCAAATGGTTACATTGTG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTGTGGGAGGCCAAGTTaGGAGGGAAAAGAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMCGRPS*EGKEKL
Trigger: TAACTTCTCTTTTCCCTCCCAACTTGGCCTCCCACA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATGGCCAAAATGAAATaGAACGTGTGGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMMAKMK*NVWEAK
Trigger: CTTGGCCTCCCACACGTTCCATTTCATTTTGGCCAT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGTTGGCACCTGGAAATaGTGGGGAAGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHVGTWK*WGRLPS
Trigger: AGAAGGAAGCCTTCCCCACCATTTCCAGGTGCCAAC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATGTCATCTTTCTGGATaGTTACGCAACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRCHLSG*LRNAEQ
Trigger: TTGTTCAGCGTTGCGTAATCATCCAGAAAGATGACA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACCCCAGATGCTCCAGGTaGATGAGGAGATGTCATGAT +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHPRCSR*MRRCHD
Trigger: ATCATGACATCTCCTCATTCACCTGGAGCATCTGGG...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTGTTTCTGCCTCACTaGCTGTTAGGGTGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLFLPH*LLGCPL
Trigger: TAGGGGACACCCTAACAGTCAGTGAGGCAGAAACAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCTTCTAAGTGCCTTTaGACTTCTGGATGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSSKCL*TSGWTL
Trigger: AAGAGTCCATCCAGAAGTTCAAAGGCACTTAGAAGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACAACTTGGCAGAGTCCTaGGGTTCAGGACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYNLAES*GSGLTD
Trigger: ATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTT...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAAATCTTCCCCAATCTaGTCGATAACAGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRKSSPI*SITEVS
Trigger: TGAGACCTCTGTTATCGATCAGATTGGGGAAGATTT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAAAATCTTCCCCAATCTaGTCGATAACAGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRKSSPI*SITEVS
Trigger: TGAGACCTCTGTTATCGATCAGATTGGGGAAGATTT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATATGAATGTACTCCATaGTCTGGCTCTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRYECTP*SGSVNL
Trigger: CAGATTCACAGAGCCAGATCATGGAGTACATTCATA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGTGAGGAGAGTAGAGTaGGGGAATGGATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHVRRVE*GNGYSL
Trigger: GAGGGAATATCCATTCCCTCACTCTACTCTCCTCAC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACTAATTCCATCATCCTaGAAGGAAGATGTCACAACC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLIPSS*KEDVTT
Trigger: GGTTGTGACATCTTCCTTTCAGGATGATGGAATTAG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGTAAGCGAGCCTTCTaGGCTAAAATGCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSKRAF*AKMLLV
Trigger: TACCAACAGCATTTTAGCTCAGAAGGCTCGCTTACT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCACTCTTGGGACTATCTaGATTGTCACTACTGGGCCG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFTLGTI*IVTTGP
Trigger: CGGCCCAGTAGTGACAATGCAGATAGTCCCAAGAGT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACATCCGACCCCGTTTGTaGTCCAAATTTCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYIRPRL*SKFRGS
Trigger: AGAGCCTCGAAATTTGGAGCACAAACGGGGTCGGAT...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTCACATTCCTCCTCCTaGACTTGGTCTAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIASHSSS*TWSNGG
Trigger: ACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACGACTAACAAGCTGCTaGCAGTTGGGTGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKRLTSC*QLGGSV
Trigger: GACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTCTCTGTCTGGACTCTaGAAACCAGTGACTGAAATG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPSLSGL*KPVTEM
Trigger: CATTTCAGTCACTGGTTTGCAGAGTCCAGACAGAGA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATGGACTGTAACAAGTTaGAATGTCACCAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRWTVTS*NVTSSS
Trigger: ACTGGAACTGGTGACATTGCAACTTGTTACAGTCCA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCAGAGCCTGTGGCTTTaGATAACTGCTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFQSLWL*ITALAA
Trigger: AGCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTG...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCTTTTGGGCCACTCTTaGGACTATCTGCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIALLGHS*DYLHCH
Trigger: GTGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGAGTTTCTTTGGAATTaGTATGTTTATACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILEFLWN*YVYTGL
Trigger: CAGACCTGTATAAACATACCAATTCCAAAGAAACTC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTTGCTAACCCACTCTaGCGCAACTTGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKFANPL*RNLAES
Trigger: GGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAAGCTACAGAAGACATaGAATTGGCAGGCAGGTATC +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMKLQKT*NWQAGI
Trigger: GATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTGACAACTTCAGGCTaGAGGTATCAAGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLTTSG*RYQGDA
Trigger: AGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTCAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAATCAAGACCCCCTTCTaGCTCCATGGTAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKIKTPF*LHGRHL
Trigger: GAGATGCCTACCATGGAGCCAGAAGGGGGTCTTGAT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGAGAATGTTGCTGCTaGTGGGTGGATTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGECCC*WVDSTA
Trigger: TGCTGTGGAATCCACCCACCAGCAGCAACATTCTCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAAGTAGAGTGAGGGAATaGATATTCCCTCACAAACAG +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSRVRE*IFPHKQ
Trigger: CTGTTTGTGAGGGAATATCCATTCCCTCACTCTACT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCACAATGTAACCATTTaGTTTTTACTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSSSAFTISFSTPPLAILHNVTI*FLLVPP
Trigger: AGGAGGAACAAGTAAAAACCAAATGGTTACATTGTG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGTGCGTCATAAAAGCTaGCCTACCTCACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMVRHKS*PTSLNF
Trigger: AAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGGGGTCAAAATCATGTaGTGCAATGCGCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASGVKIM*CNALNF
Trigger: AAAGTTGAGCGCATTGCATCACATGATTTTGACCCC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACCACCTCCAGATGATTTaGATGAGTCACCAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHHLQMI*MSHQSS
Trigger: GGAACTCTGGTGACTCATTCAAATCATCTGGAGGTG...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATCTACTTTCTGGTTATaGACCACATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRSTFWL*TTLFSS
Trigger: GGAGGAAAACAATGTGGTTCATAACCAGAAAGTAGA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAAATCTTCCCCAATCTaGTCGATAACAGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMKSSPI*SITEVS
Trigger: TGAGACCTCTGTTATCGATCAGATTGGGGAAGATTT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTTTCTGACGAGATTTaGTCATTTCCAGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMFSDEI*SFPGRK
Trigger: CTTTCGCCCTGGAAATGATCAAATCTCGTCAGAAAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACGAGAATCCTTTTTCTaGCGAGATTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRRESFF*RDLIIS
Trigger: GGAAATGATCAAATCTCGTCAGAAAAAGGATTCTCG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGTAAGCCTTTGCATTTaGGTGGGAATAATATCCTTC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRVSLCI*VGIISF
Trigger: GAAGGATATTATTCCCACTCAAATGCAAAGGCTTAC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGCAAAAGATTCAGTTaGAGTCCGTGGACTGTAACA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSKRFS*SPWTVT
Trigger: TGTTACAGTCCACGGACTTCAACTGAATCTTTTGCT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGATGTGAGCAACGGATaGACTCCTTGTTTATTAACA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRDVSNG*TPCLLT
Trigger: TGTTAATAAACAAGGAGTTCATCCGTTGCTCACATC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCATGATTACGCAACGCTaGACAAGACCATATATCTCG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPMITQR*TRPYIS
Trigger: CGAGATATATGGTCTTGTTCAGCGTTGCGTAATCAT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGTTCCAAGGAGAAATTaGACTGCAGGGAAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMVPRRN*TAGKAN
Trigger: ATTTGCTTTCCCTGCAGTTCAATTTCTCCTTGGAAC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCACATTCCTCCTCCTaGACTTGGTCTAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSHSSS*TWSNGG
Trigger: ACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATGTTGCACCAGCAACTaGTTCAACAAACCCAAATTT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRCCTSN*FNKPKF
Trigger: AAATTTGGGTTTGTTGAAGCAGTTGCTGGTGCAACA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACGTCAAACCTAGCTGTTaGACCAGCAACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYVKPSC*TSNCFN
Trigger: GTTGAAGCAGTTGCTGGTGCAACAGCTAGGTTTGAC...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTCTCTACCCAACTTCTaGATACTCCATCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHSLPNF*ILHPDL
Trigger: GAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATTTGTTTTTACTTCCTaGTCAATCTGCAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRFVFTS*SICRDS
Trigger: ACTGTCCCTGCAGATTGAGCAGGAAGTAAAAACAAA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGAGGAATGTGTTTCTTaGCCTCTTGGATCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINREECVS*PLGSLL
Trigger: TAAAAGAGATCCAAGAGGCCAAGAAACACATTCCTC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGTAATTCAATGCTCTaGAAACAGCTGCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSNSML*KQLHCP
Trigger: TGGACAGTGCAGCTGTTTCCAGAGCATTGAATTACT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTCCTTCTGTAGTTCCATaGCTCTGCCAATTGCACTGT +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLPSVVP*LCQLHC
Trigger: ACAGTGCAATTGGCAGAGCCATGGAACTACAGAAGG...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACAGAAGACATGGAATTaGCAGGCAGGTATCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKQKTWN*QAGIQR
Trigger: ACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTCTTTCGAAAGGGCTTTaGTGTCCCATGTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLLSKGL*CPMFSH
Trigger: GTGACTGAACATGGGACACCAAAGCCCTTTCGAAAG...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACAATTTCTCCTCTCCTaGTCCGCTGAACCATGTCAG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKQFLLS*SAEPCQ
Trigger: CTGACATGGTTCAGCGGACCAGGAGAGGAGAAATTG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCACCTTCCAAACCAATaGCCCTTCATGAATCATCTT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMHLPNQ*PFMNHL
Trigger: AAGATGATTCATGAAGGGCCATTGGTTTGGAAGGTG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTAAAATGTTACTTGCCTaGCTATCCTGGGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLKMLLA*LSWGAS
Trigger: ACTGGCACCCCAGGATAGCCAGGCAAGTAACATTTT...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCTTCTTATCTGTTGGTaGCTCTCGGTTCAAAATACT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMLLICW*LSVQNT
Trigger: AGTATTTTGAACCGAGAGTCACCAACAGATAAGAAG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTGCTCCATCTTCTTTaGCAGACTGTACGAAGACTG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLLHLL*QTVRRL
Trigger: CAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACACCTCCAGATGATTTaGATGAGTCACCAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKHLQMI*MSHQSS
Trigger: GGAACTCTGGTGACTCATTCAAATCATCTGGAGGTG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACATATGTCCAATGACTaGCGGCTCTACTTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKHMSND*RLYFRV
Trigger: GACTCTGAAGTAGAGCCGTCAGTCATTGGACATATG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTCTACTTTCTGGTTATaGACCACATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPSTFWL*TTLFSS
Trigger: GGAGGAAAACAATGTGGTTCATAACCAGAAAGTAGA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTCTGCTCCAATAATATaGGGTGCTATACGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHSAPII*GAIRVE
Trigger: CTCAACCCGTATAGCACCTCATATTATTGGAGCAGA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACAAGAAAACAGCCAAATaGGCCGGGCGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHKKTAK*AGRDFS
Trigger: ACTAAAATCTCGCCCGGCTCATTTGGCTGTTTTCTT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTGTTCATCCTCACTTTaGCTTTCTCCAAAAGCTACA +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMCSSSL*LSPKAT
Trigger: TGTAGCTTTTGGAGAAAGTCAAAGTGAGGATGAACA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCACTTCCTGTCTTTTaGTTTCACAAGGTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSLPVF*FHKVLV
Trigger: GACTAAAACCTTGTGAAATCAAAAGACAGGAAGTGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCTTGCACAAAAGTCTaGAATCGAGAATCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSCTKV*NRESFF
Trigger: GAAAAAGGATTCTCGATTTCAGACTTTTGTGCAAGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTGTTTTCTGCCTCCTTaGCAGCCTGATTTACATAAT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPCFLPP*QPDLHN
Trigger: ATTATGTAAATCAGGCTGTCAAGGAGGCAGAAAACA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATTAAATCCAAATTCCTaGGCTCTTCAACATTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLNPNS*ALQHLG
Trigger: ACCCAAATGTTGAAGAGCTCAGGAATTTGGATTTAA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACACTTTGGGGGCTTGCTaGTTTGCCTTGATTAACTGT +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHTLGAC*FALINC
Trigger: ACAGTTAATCAAGGCAAATCAGCAAGCCCCCAAAGT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGCTAATTTTGTATTTTaGGGTCCTATGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPANFVF*GPMHAV
Trigger: AACTGCGTGCATAGGACCTCAAAATACAAAATTAGC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTGACGACAGTGATCTaGAGCTTTCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLTTVI*SFLHLL
Trigger: GAGAAGGTGAAGAAAGCTGCAGATCACTGTCGTCAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCAGCTTTGTTATCTGTTaGCACTTGTCGAACCAACAC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIASFVIC*HLSNQH
Trigger: GTGTTGGTTCGACAAGTGGCAACAGATAACAAAGCT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGTGACTGAAATGCCATaGTGCTCCTCTTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRVTEMP*CSSFNF
Trigger: AAAATTAAAAGAGGAGCAGCATGGCATTTCAGTCAC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTGTTGCACCAGCAACTaGTTCAACAAACCCAAATTT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPCCTSN*FNKPKF
Trigger: AAATTTGGGTTTGTTGAAGCAGTTGCTGGTGCAACA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATCTCTACCCAACTTCTaGATACTCCATCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSLPNF*ILHPDL
Trigger: GAGGTCAGGATGGAGTATGCAGAAGTTGGGTAGAGA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTTATTTTGAGGTCCTATaGACGCAGTTCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLYFEVL*TQFSVV
Trigger: CACCACTGAGAACTGCGTGCATAGGACCTCAAAATA...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTTTTTGGAATATATCTaGTTAGCAGTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPFLEYI*LAVGTW
Trigger: CCAGGTGCCAACTGCTAAGCAGATATATTCCAAAAA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTCAACGGATGCGGCTTaGAGCAAAACAAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHSTDAA*SKTSYL
Trigger: GAGATAACTTGTTTTGCTCCAAGCCGCATCCGTTGA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGTGCCTTTGAACTTCTaGATGGACTCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAVPLNF*MDSFLH
Trigger: ATGCAAGAAAGAGTCCATCCAGAAGTTCAAAGGCAC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTGTGCCTTTGAACTTCTaGATGGACTCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASVPLNF*MDSFLH
Trigger: ATGCAAGAAAGAGTCCATCCAGAAGTTCAAAGGCAC...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCTTCTCCCTTTCTGTTaGCCATTCTGTGTATTTGGC +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFLLPFC*PFCVFG
Trigger: GCCAAATACACAGAATGGCCAACAGAAAGGGAGAAG...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATGGAATTGGCTTTGTaGATTGCTCCTTCACTGATG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAMELAL*IAPSLM
Trigger: CATCAGTGAAGGAGCAATCCACAAAGCCAATTCCAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTGCCTTTGGCAAAGAATaGTGTAACTTTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLAFGKE*CNFPPP
Trigger: AGGTGGAGGAAAGTTACACCATTCTTTGCCAAAGGC...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTCCACTTTGAAATATaGAAGCCCCACGTATTACAC +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMFHFEI*KPHVLH
Trigger: GTGTAATACGTGGGGCTTCCATATTTCAAAGTGGAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGGGTCAAAATCATGTaGTGCAATGCGCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGVKIM*CNALNF
Trigger: AAAGTTGAGCGCATTGCATCACATGATTTTGACCCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTGTCATCTTTCTGGATaGTTACGCAACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFCHLSG*LRNAEQ
Trigger: TTGTTCAGCGTTGCGTAATCATCCAGAAAGATGACA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATCTTCCTCTACAGCCTaGGCAGTCATCAATACTTCT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKSSSTA*AVINTS
Trigger: AGAAGTATTGATGACTGCTCAGGCTGTAGAGGAAGA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTTCTCCAACTTGCTTTaGTCCTGTATCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMFSNLL*SCIILF
Trigger: AAAGAGAATGATACAGGATCAAAGCAAGTTGGAGAA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTAATCAAAGACAGTATTaGGAGTACGAGGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLNQRQY*EYEVCH
Trigger: ATGGCACACCTCGTACTCTCAATACTGTCTTTGATT...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGCCAGAATCTTACTATaGCACCTTAAAACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAARILL*HLKTSL
Trigger: TAGACTGGTTTTAAGGTGTCATAGTAAGATTCTGGC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCAGCCTCTATCTTATaGATGTACTCCATGATCTGG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSASIL*MYSMIW
Trigger: CCAGATCATGGAGTACATTCATAAGATAGAGGCTGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCCTATTAATTGTGGTTaGTCCCAGCTACAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFPINCG*SQLQRR
Trigger: TCTTCTCTGTAGCTGGGATCAACCACAATTAATAGG...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAAAGCAGGAAGATGTCTaGCAGTCACTGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKKQEDV*QSLTGK
Trigger: TTTTCCTGTCAGTGACTGTCAGACATCTTCCTGCTT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTGGAGTAGAAGAAAATaGAATCCTCACCAAAATACC +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPWSRRK*NPHQNT
Trigger: GGTATTTTGGTGAGGATTTCATTTTCTTCTACTCCA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532993.5
CDS-3UTR GCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCAGCTTTGTTATCTGTTaGCACTTGTCGAACCAACAC +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSFVIC*HLSNQH
Trigger: GTGTTGGTTCGACAAGTGGCAACAGATAACAAAGCT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTTCAGAAACTGTCTGTaGCACCAGTTCATAAATCTG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAFRNCL*HQFINL
Trigger: CAGATTTATGAACTGGTGGCACAGACAGTTTCTGAA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACTGTATGTTGTTCCTTTaGAAACTGTCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYCMLFL*KLSLSH
Trigger: GTGGCTGAGAGACAGTTTGCAAAGGAACAACATACA...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACACTTCCTGCTCAATCTaGAGGGACAGTTTTACACAA +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYTSCSI*RDSFTQ
Trigger: TTGTGTAAAACTGTCCCTGCAGATTGAGCAGGAAGT...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR GCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTAAAGTTATCTTCAGGTaGGTCATAAAAGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASKVIFR*VIKAGL
Trigger: TAGGCCAGCTTTTATGACGCACCTGAAGATAACTTT...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATAAATTCTCTCTTTTaGGCCACTCTTGGGACTATC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAINSLF*ATLGTI
Trigger: GATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATGCGACGAGTTTCTTTaGAATTGGTATGTTTATACA +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINRCDEFL*NWYVYT
Trigger: TGTATAAACATACCAATTCCAAAGAAACTCGTCGCA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAATACTTCTTCAATTTTaGCAACAATCTGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSLTQRQTASNSIILKGRILLQF*QQSVLH
Trigger: GTGCAGAACAGATTGTTGCCAAAATTGAAGAAGTAT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGCTGTTCTGTATCTTaGGAAATGTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGCSVS*EMLPVF
Trigger: GAAGACTGGCAACATTTCCCAAGATACAGAACAGCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGAAGTACTAGAGCTATaGTCAAAGTATTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EGTNERCEQRMNSLFINREVLEL*SKYFSS
Trigger: ACTGGAAAAATACTTTGACCATAGCTCTAGTACTTC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATGTCATCTTTCTGGATaGTTACGCAACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKCHLSG*LRNAEQ
Trigger: TTGTTCAGCGTTGCGTAATCATCCAGAAAGATGACA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTCGAGAATCCTTTTTCTaGCGAGATTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLRESFF*RDLIIS
Trigger: GGAAATGATCAAATCTCGTCAGAAAAAGGATTCTCG...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACCTCAAATTACAATTCTaGAACTTACCCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYLKLQF*NLPSVG
Trigger: CCCTACAGAGGGTAAGTTTCAGAATTGTAATTTGAG...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAATGATTACGCAACGCTaGACAAGACCATATATCTCG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKMITQR*TRPYIS
Trigger: CGAGATATATGGTCTTGTTCAGCGTTGCGTAATCAT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTATTTACTTTTCTCCTaGTTAATTGCCCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASYLLFS*LIALDG
Trigger: ACCATCGAGGGCAATTAATCAGGAGAAAAGTAAATA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGGACAAGACACTGGCTaGACTAGAGAAACTGAAATT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKGQDTG*TRETEI
Trigger: AATTTCAGTTTCTCTAGTTCAGCCAGTGTCTTGTCC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACTAATTCCATCATCCTaGAAGGAAGATGTCACAACC +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLIPSS*KEDVTT
Trigger: GGTTGTGACATCTTCCTTTCAGGATGATGGAATTAG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGAAACTCAAGGAAGATaGGACGAGTTTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFETQGR*DEFLWN
Trigger: ATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATGAGAATAACATACTaGATGGTGGAGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAMRITY*MVELLS
Trigger: AGATAAGAGCTCCACCATGCAGTATGTTATTCTCAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAACTTCCTGCTCAATCTaGAGGGACAGTTTTACACAA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKTSCSI*RDSFTQ
Trigger: TTGTGTAAAACTGTCCCTGCAGATTGAGCAGGAAGT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATTATCCAACAGAAGTaGGTACTTAGTAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAIIQQK*VLSKPL
Trigger: CAAAGGCTTACTAAGTACCCACTTCTGTTGGATAAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTATTATCCAACAGAAGTaGGTACTTAGTAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASIIQQK*VLSKPL
Trigger: CAAAGGCTTACTAAGTACCCACTTCTGTTGGATAAT...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCACAATGTAACCATTTaGTTTTTACTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMHNVTI*FLLVPP
Trigger: AGGAGGAACAAGTAAAAACCAAATGGTTACATTGTG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGAAGTACTAGAGCTATaGTCAAAGTATTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKASTLKYGSPEVLEL*SKYFSS
Trigger: ACTGGAAAAATACTTTGACCATAGCTCTAGTACTTC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACTTCCACTTTGAAATATaGAAGCCCCACGTATTACAC +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYFHFEI*KPHVLH
Trigger: GTGTAATACGTGGGGCTTCCATATTTCAAAGTGGAA...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CCA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTACATTCGACATCCTTaGAAAGGCATTTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: DQSSSNSKPYIDFREESFYIRHP*KGICQM
Trigger: CATCTGACAAATGCCTTTCCAAGGATGTCGAATGTA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532993.5
3UTR CAA 72 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTaGAAATATGGAAGCCCCACGTATTACACCAAATTT +
Preference number: 4 (lower is better)
Translates to: NHISTSEKKAST*KYGSPTYYTKF
Trigger: AAATTTGGTGTAATACGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACTCACTTCCTGTCTTTTaGTTTCACAAGGTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYSLPVF*FHKVLV
Trigger: GACTAAAACCTTGTGAAATCAAAAGACAGGAAGTGA...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGCCAGAATCTTACTATaGCACCTTAAAACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKARILL*HLKTSL
Trigger: TAGACTGGTTTTAAGGTGTCATAGTAAGATTCTGGC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTGCGACGAGTTTCTTTaGAATTGGTATGTTTATACA +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIACDEFL*NWYVYT
Trigger: TGTATAAACATACCAATTCCAAAGAAACTCGTCGCA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATACTTCTTCAATTTTaGCAACAATCTGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAILLQF*QQSVLH
Trigger: GTGCAGAACAGATTGTTGCCAAAATTGAAGAAGTAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGGGGTCATAATCATGTaGTCCATTACTAAAATGTTA +
Preference number: 4 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAGVIIM*SITKML
Trigger: TAACATTTTAGTAATGGACCACATGATTATGACCCC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR TCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTCTCCAACTTGCTTTaGTCCTGTATCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKFSNLL*SCIILF
Trigger: AAAGAGAATGATACAGGATCAAAGCAAGTTGGAGAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACACCAGTCTATCATCCTaGTTTTGTAACAATACAAGA +
Preference number: 4 (lower is better)
Translates to: QSSSNSKPYIDFREESFHTSLSS*FCNNTR
Trigger: TCTTGTATTGTTACAAAAGCAGGATGATAGACTGGT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
3UTR CAA 72 bp GGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTaGTTTATTAACAGAATTTACAGACTTCATTTTAGT +
Preference number: 4 (lower is better)
Translates to: GTNERCEQRMNS*FINRIYRLHFS
Trigger: ACTAAAATGAAGTCTGTAAATTCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR GCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAACTGAAATGCCATGCTaGTCCTCTTTTAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKTEMPC*SSFNFE
Trigger: TTCAAAATTAAAAGAGGAGCAGCATGGCATTTCAGT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CCA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGAGTTTCTTTGGAATTaGTATGTTTATACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKEFLWN*YVYTGL
Trigger: CAGACCTGTATAAACATACCAATTCCAAAGAAACTC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS GCA 90 bp GGCCCGGGGCTCCTTCTGTGCTCGCCGCCCTCACCAGGCTCCCGGTaGTGGGACGAGCCGCTGGCGCCGGCGGAGAGGTCCCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: GPGLLLCSPPSPGSR*WDEPLAPAERSRGP
Trigger: CGGGCCGCGGGACCTCTCCGCCGGCGCCAGCGGCTCGTCCCAGCACCGGGAGCCTGGTGAGGGCGGCGAGCACAGAAGGAGCCCCGGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS GCA 90 bp AGGGCCGGGGCCCTCCCTCCCGGCTCTCTATCTGGGGCTGCCGGCTaGTCGTGGCCGCAGCGTTGGCCGCGTCTCCGGCCGTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: RAGALPPGSLSGAAG*SWPQRWPRLRPSRA
Trigger: GGCGCGGGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGGAGGGAGGGCCCCGGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 90 bp GGGGCCCTCCCTCCCGGCTCTCTATCTGGGGCTGCCGGCTGCTCGTaGCCGCAGCGTTGGCCGCGTCTCCGGCCGTCCCGCGCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GALPPGSLSGAAGCS*PQRWPRLRPSRAGL
Trigger: GAGCCCGGCGCGGGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGGAGGGAGGGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 90 bp TGTGCTCGCCGCCCTCACCAGGCTCCCGGTGCTGGGACGAGCCGCTaGCGCCGGCGGAGAGGTCCCGCGGCCCGAGGTGACAGGGACCCG +
Preference number: 5 (lower is better)
Translates to: CARRPHQAPGAGTSR*RRRRGPAARGDRDP
Trigger: CGGGTCCCTGTCACCTCGGGCCGCGGGACCTCTCCGCCGGCGCCAGCGGCTCGTCCCAGCACCGGGAGCCTGGTGAGGGCGGCGAGCACA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 90 bp TGGGACGAGCCGCTGGCGCCGGCGGAGAGGTCCCGCGGCCCGAGGTaGCAGGGACCCGGGTCTCTCAGCGCCGCGGACTGCTCCCCATCC +
Preference number: 5 (lower is better)
Translates to: WDEPLAPAERSRGPR*QGPGSLSAADCSPS
Trigger: GGATGGGGAGCAGTCCGCGGCGCTGAGAGACCCGGGTCCCTGTCACCTCGGGCCGCGGGACCTCTCCGCCGGCGCCAGCGGCTCGTCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 90 bp CCCGGCTCTCTATCTGGGGCTGCCGGCTGCTCGTGGCCGCAGCGTTaGCCGCGTCTCCGGCCGTCCCGCGCCGGGCTCGCGCGATTCCAT +
Preference number: 5 (lower is better)
Translates to: PGSLSGAAGCSWPQR*PRLRPSRAGLARFH
Trigger: ATGGAATCGCGCGAGCCCGGCGCGGGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 90 bp AAATCCGCGCGCAGTGGGAAGGGGACCCGGGACTCCCGCCGGGGCTaGGGCGGGATCAGCTCACGGACGGGTGTCGGCTCCTCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: KSARSGKGTRDSRRG*GGISSRTGVGSSSG
Trigger: TCCGGAGGAGGAGCCGACACCCGTCCGTGAGCTGATCCCGCCCCAGCCCCGGCGGGAGTCCCGGGTCCCCTTCCCACTGCGCGCGGATTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 90 bp CAGGGACCCGGGTCTCTCAGCGCCGCGGACTGCTCCCCATCCCTTTaGGGCCCGGACTCTTCCGCAATCGCCAGAGGCGGCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QGPGSLSAADCSPSL*GPDSSAIARGGGSS
Trigger: GGAGGAGCCGCCGCCTCTGGCGATTGCGGAAGAGTCCGGGCCTCAAAGGGATGGGGAGCAGTCCGCGGCGCTGAGAGACCCGGGTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTCGTGGCCGCAGCGTaGGCCGCGTCTCCGGCCGTC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLVAAA*AASPAV
Trigger: GACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 90 bp GGTGGATTCCACAGCAGGGATGCCTGTCATGGGCTGCAGGGTAAGTaGGGAAGCAACCTCCTCATCTGTGGAACTCTCCTGCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: GGFHSRDACHGLQGK*GSNLLICGTLLHWV
Trigger: GACCCAGTGCAGGAGAGTTCCACAGATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS GCA 90 bp TGCTGCTGGTGGGTGGATTCCACAGCAGGGATGCCTGTCATGGGCTaGAGGGTAAGTGAGGAAGCAACCTCCTCATCTGTGGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: CCWWVDSTAGMPVMG*RVSEEATSSSVELS
Trigger: GGAGAGTTCCACAGATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCACTGTGTGCCACTCATaGGGGCCCTTGGCGAGAGGT +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSTVCHS*GPLARG
Trigger: ACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAGT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGTTGTCATGACGGCTaGGTCTCCGTGGGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQICCHDG*VSVGVP
Trigger: TGGGACCCCCACGGAGACCAAGCCGTCATGACAACA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTGTTGTCATGACGGCTaGGTCTCCGTGGGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQCCHDG*VSVGVP
Trigger: TGGGACCCCCACGGAGACCAAGCCGTCATGACAACA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCTGCTCCCCATCCCTTaGAGGCCCGGACTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLLPIP*RPGLFR
Trigger: GCGGAAGAGTCCGGGCCTCAAAGGGATGGGGAGCAG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 90 bp CGGCTCTACTTCAGAGTCGGCAAGTGGAATCTGGGGCGACCCAGGTaGGCGTCCCTGAACAGTGAGAGCTACATAGGAACCAGATTTGAT +
Preference number: 5 (lower is better)
Translates to: RLYFRVGKWNLGRPR*ASLNSESYIGTRFD
Trigger: ATCAAATCTGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAGATTCCACTTGCCGACTCTGAAGTAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGAGGTGCTATACGGGTaGAGGGACTTCCGACAAGTG +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQEVLYG*RDFRQV
Trigger: CACTTGTCGGAAGTCCCTCAACCCGTATAGCACCTC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCCAATCCGACCCCGTTaGTGCTCCAAATTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQPIRPR*CSKFRG
Trigger: GCCTCGAAATTTGGAGCACAAACGGGGTCGGATTGG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCCAATCCGACCCCGTTaGTGCTCCAAATTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVPIRPR*CSKFRG
Trigger: GCCTCGAAATTTGGAGCACAAACGGGGTCGGATTGG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCCATGGCTCTGCCAATaGCACTGTTGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQPWLCQ*HCCHDG
Trigger: GCCGTCATGACAACAGTGCAATTGGCAGAGCCATGG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGGGCACCTTGGGACTaGACTAATCCCAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIWAPWD*TNPRWF
Trigger: GAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGTACGAAGACTGGATaGTCTCCACTGACCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQICTKTG*SPLTVS
Trigger: GCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGGCAGAGCCTGTGGCTTaGGATAACTGCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKAEPVA*DNCSCS
Trigger: GCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGC...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTGTTGTCATGACGGCTaGGTCTCCGTGGGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVCCHDG*VSVGVP
Trigger: TGGGACCCCCACGGAGACCAAGCCGTCATGACAACA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCGTCTGTTCCTTCATTaGCTAACCCACTCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVRLFLH*LTHSGA
Trigger: TGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCGTCTGTTCCTTCATTaGCTAACCCACTCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIRLFLH*LTHSGA
Trigger: TGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGACAAGCTGCTGCCAGTaGGGTGGATCTGTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQTSCCQ*GGSVSK
Trigger: CTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTGGGCACCTTGGGACTaGACTAATCCCAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKWAPWD*TNPRWF
Trigger: GAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS GCA 90 bp TCTAAGACACTTAGCAGCACCCCTGACCTCTATGCACCCACCAGATaGCAGCTGCAGCGTTTCCAGACATTTGTCAAATGTCCACGGAGG +
Preference number: 5 (lower is better)
Translates to: SKTLSSTPDLYAPTR*QLQRFQTFVKCPRR
Trigger: CCTCCGTGGACATTTGACAAATGTCTGGAAACGCTGCAGCTGGCATCTGGTGGGTGCATAGAGGTCAGGGGTGCTGCTAAGTGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS GCA 90 bp AGCTTCCACATCACAGCCACGTTAAAACCCCAGGCTCCCTTTCCCTaGAGTAGATCATGCCATGCACAGCAGACACAAGAAAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SFHITATLKPQAPFP*SRSCHAQQTQERLQ
Trigger: CTGCAGCCTTTCTTGTGTCTGCTGTGCATGGCATGATCTACTGCAGGGAAAGGGAGCCTGGGGTTTTAACGTGGCTGTGATGTGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGCCATGGCTCTGCCAATaGCACTGTTGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQPWLCQ*HCCHDG
Trigger: GCCGTCATGACAACAGTGCAATTGGCAGAGCCATGG...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGACAAGCTGCTGCCAGTaGGGTGGATCTGTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKTSCCQ*GGSVSK
Trigger: CTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGT...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTCTTCTAGGCGCTGCTaGTTTTCTGCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSSRRC*FSASLT
Trigger: TGTCAAGGAGGCAGAAAACAAGCAGCGCCTAGAAGA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCTTCTAGGCGCTGCTaGTTTTCTGCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSSRRC*FSASLT
Trigger: TGTCAAGGAGGCAGAAAACAAGCAGCGCCTAGAAGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCTCCTTCGCCAGGTGTaGACTGTGGTAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQILLRQV*TVVMEL
Trigger: CAATTCCATTACCACAGTCAACACCTGGCGAAGGAG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCATTCTGAGGAGAATGTaGCTGCTGGTGGGTGGATTC +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIILRRM*LLVGGF
Trigger: GAATCCACCCACCAGCAGCAACATTCTCCTCAGAAT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCATTCTGAGGAGAATGTaGCTGCTGGTGGGTGGATTC +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSILRRM*LLVGGF
Trigger: GAATCCACCCACCAGCAGCAACATTCTCCTCAGAAT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp GTTCCTTCATTTGCTAACCCACTCTGGCGCAACTTGGCAGAGTCCTaGGGTTCAGGACTCACAGATGAGGGTGTGGATAAGTGCTTAGGG +
Preference number: 5 (lower is better)
Translates to: VPSFANPLWRNLAES*GSGLTDEGVDKCLG
Trigger: CCCTAAGCACTTATCCACACCCTCATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAATGAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS TCA 90 bp GGAAGAAGAAAAGAGAGAAAGGGAGAGGAAGGTAGAGCAGAAAGATaGGGAGATGGAGGAGGGGTGAGGCAGGACGACGAAAGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: GRRKERKGEEGRAER*GDGGGVRQDDESEE
Trigger: TTCCTCGCTTTCGTCGTCCTGCCTCACCCCTCCTCCATCTCCTCATCTTTCTGCTCTACCTTCCTCTCCCTTTCTCTCTTTTCTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS GCA 90 bp TGGGACTATCTGCATTGTCACTACTGGGCCGAGAAGCATCTCCACTaGTACAGTCAGTCCTGCCCAGTACATCTCCAGGATCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: WDYLHCHYWAEKHLH*YSQSCPVHLQDLFL
Trigger: CAGAAACAGATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAGATAGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS GCA 90 bp CCTTCGCCAGGTGTTGACTGTGGTAATGGAATTGGCTTTGTGGATTaGTCCTTCACTGATGCAGCCATCCGACAGATTAGGTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PSPGVDCGNGIGFVD*SFTDAAIRQIRSCQ
Trigger: CTGGCAGGACCTAATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CCA 90 bp ATCCAGCGTCTGTTCCTTCATTTGCTAACCCACTCTGGCGCAACTTaGCAGAGTCCTGAGGTTCAGGACTCACAGATGAGGGTGTGGATA +
Preference number: 5 (lower is better)
Translates to: IQRLFLHLLTHSGAT*QSPEVQDSQMRVWI
Trigger: TATCCACACCCTCATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 90 bp GATGACACTGTCTGTCTGCGGCCCCTGAGAGGCTGTTCTGTATCTTaGGAAATGTTGCCAGTCTTCCTGAACGCTCTTCTCAGTCAAACC +
Preference number: 5 (lower is better)
Translates to: DDTVCLRPLRGCSVS*EMLPVFLNALLSQT
Trigger: GGTTTGACTGAGAAGAGCGTTCAGGAAGACTGGCAACATTTCCCAAGATACAGAACAGCCTCTCAGGGGCCGCAGACAGACAGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CCA 90 bp TACTCCATGATCTGGCTCTGTGAATCTGCACAAGAGGAGGGACTCTaGATCTCAAAACAGGAATACTCCATAGCTCCCCAGCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: YSMIWLCESAQEEGL*ISKQEYSIAPQRCW
Trigger: CCAGCAGCGCTGGGGAGCTATGGAGTATTCCTGTTTTGAGATCCAGAGTCCCTCCTCTTGTGCAGATTCACAGAGCCAGATCATGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGTCAACGGATGCGGCTaGGAGCAAAACAAGTTATCT +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSVNGCG*EQNKLS
Trigger: AGATAACTTGTTTTGCTCCAAGCCGCATCCGTTGAC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGCCTTATAGGTTTTTaGAGGGGAAACCTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQICLIGF*RGNLSV
Trigger: CACCGACAGGTTTCCCCTCAAAAAACCTATAAGGCA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGCTGCTCCATCTTCTTaGACAGACTGTACGAAGACT +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQAAPSS*TDCTKT
Trigger: AGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGCCACCTCCAGATGATTaGAATGAGTCACCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQPPPDD*NESPEF
Trigger: GAACTCTGGTGACTCATTCAAATCATCTGGAGGTGG...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCCACCTCCAGATGATTaGAATGAGTCACCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIPPPDD*NESPEF
Trigger: GAACTCTGGTGACTCATTCAAATCATCTGGAGGTGG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTCTTTTGGGCCACTCTaGGGACTATCTGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSSFGPL*GLSALS
Trigger: TGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAGA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCTTTTGGGCCACTCTaGGGACTATCTGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSFGPL*GLSALS
Trigger: TGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAGA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGACTTTCGAAAGGGCTTaGGTGTCCCATGTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQTFERA*VSHVQS
Trigger: TGACTGAACATGGGACACCAAAGCCCTTTCGAAAGT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGTGGACTGTAACAAGTaGCAATGTCACCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQVDCNK*QCHQFQ
Trigger: CTGGAACTGGTGACATTGCAACTTGTTACAGTCCAC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCCTTTTATCTGAGTGCTaGTCTGTGAGGGCTGATCCA +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSLLSEC*SVRADP
Trigger: TGGATCAGCCCTCACAGACAAGCACTCAGATAAAAG...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGCTTTTATCTGAGTGCTaGTCTGTGAGGGCTGATCCA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVLLSEC*SVRADP
Trigger: TGGATCAGCCCTCACAGACAAGCACTCAGATAAAAG...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp CTCCCAAAACGAACTGAGAAAGCCAGGGAGCGAGTCAGTCCAGAGTaGGTCGAGCTAGAGAGAAATCCTCCAGAAGGCACAAGGATAAAC +
Preference number: 5 (lower is better)
Translates to: LPKRTEKARERVSPE*VELERNPPEGTRIN
Trigger: GTTTATCCTTGTGCCTTCTGGAGGATTTCTCTCTAGCTCGACTCACTCTGGACTGACTCGCTCCCTGGCTTTCTCAGTTCGTTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS TCA 90 bp GACGAAAGCGAGGAAGAGGAGGATGTAGGGAAAGAAGAAGGGTCATaGGAAAAGAAGGAGAGGAATGGTGGACAGAGGGAGGAGGAATGC +
Preference number: 5 (lower is better)
Translates to: DESEEEEDVGKEEGS*EKKERNGGQREEEC
Trigger: GCATTCCTCCTCCCTCTGTCCACCATTCCTCTCCTTCTTTTCTCATGACCCTTCTTCTTTCCCTACATCCTCCTCTTCCTCGCTTTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS GCA 90 bp ACATGTCCGCTCCTTCTCCAAAGTCAATCGGTCCTTGTCTCGCTCTaGATCAAGTTTAGTCAGCTCGCTTTCAGCCAAGGTCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: TCPLLLQSQSVLVSL*IKFSQLAFSQGQSH
Trigger: ATGGGACTGACCTTGGCTGAAAGCGAGCTGACTAAACTTGATGCAGAGCGAGACAAGGACCGATTGACTTTGGAGAAGGAGCGGACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525960.1
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CCA 90 bp CTTCCTGGGAAAAAGAGGCCCCTGAAGCTACAGAAGACATGGAATTaGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTTGCTAACCCAC +
Preference number: 5 (lower is better)
Translates to: LPGKKRPLKLQKTWN*QAGIQRLFLHLLTH
Trigger: GTGGGTTAGCAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 90 bp TCCCTCCTTCCTGGGAAAAAGAGGCCCCTGAAGCTACAGAAGACATaGAATTGGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTTGCTA +
Preference number: 5 (lower is better)
Translates to: SLLPGKKRPLKLQKT*NWQAGIQRLFLHLL
Trigger: TAGCAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGGAAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAGAGTTCCATTCACCTaGATGATTCGATCACCTGTC +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSRVPFT*MIRSPV
Trigger: GACAGGTGATCGAATCATCAAGGTGAATGGAACTCT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGTTATCTGTTGCCACTaGTCGAACCAACACTGTACT +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIVICCH*SNQHCT
Trigger: AGTACAGTGTTGGTTCGACAAGTGGCAACAGATAAC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCACTGTGGTAATGGAATaGGCTTTGTGGATTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQITVVME*ALWIAP
Trigger: AGGAGCAATCCACAAAGCCAATTCCATTACCACAGT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGACATCCTTCTCTTCCTaGTTAACTGCTCCATCACCT +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQTSFSS*LTAPSP
Trigger: AGGTGATGGAGCAGTTAACAAGGAAGAGAAGGATGT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTGGACAGCAGAGAGCTaGGAATACTGTATAGTGAAG +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVWTAES*EYCIVK
Trigger: CTTCACTATACAGTATTCCAAGCTCTCTGCTGTCCA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTTGACTCAGGGCCCTTaGGCACCATCAGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQLTQGP*APSVQK
Trigger: TTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCCTTGGCTATCCTTTaGACTCAGGGCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPLAIL*TQGPLA
Trigger: TGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS CCA 90 bp TTTGAGGGGAAACCTGTCGGTGATAGTAGACTGTGTGCCACTCATTaGGGCCCTTGGCGAGAGGTCCTCCTTTTATCCAACTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: FEGKPVGDSRLCATH*GPWREVLLLSNLHF
Trigger: AAAATGCAAGTTGGATAAAAGGAGGACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAGTCTACTATCACCGACAGGTTTCCCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS CCA 90 bp AGCCCGCATGGCTGCTCCATCTTCTTTGACAGACTGTACGAAGACTaGATTGTCTCCACTGACCGTCAGCCCAAATCCATTGTCATCTTT +
Preference number: 5 (lower is better)
Translates to: SPHGCSIFFDRLYED*IVSTDRQPKSIVIF
Trigger: AAAGATGACAATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGCCATGCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CCA 90 bp CTCAACAAGAGGCACTCATGGCATTTGAGGGAGAACTCGTCATTGTaGGGGACACTCACTATCACAATCCTACTCCCACCACTCTACCAT +
Preference number: 5 (lower is better)
Translates to: LNKRHSWHLRENSSL*GTLTITILLPPLYH
Trigger: ATGGTAGAGTGGTGGGAGTAGGATTGTGATAGTGAGTGTCCCCCACAATGACGAGTTCTCCCTCAAATGCCATGAGTGCCTCTTGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCTGCTTCTTATCTGTaGGTGACTCTCGGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSASYL*VTLGSK
Trigger: TTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTCTGCTTCTTATCTGTaGGTGACTCTCGGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQISASYL*VTLGSK
Trigger: TTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGGTCAGCCCAAATCCATaGTCATCTTTCTGGATGATT +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVVSPNP*SSFWMI
Trigger: AATCATCCAGAAAGATGACAATGGATTTGGGCTGAC...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTGTACGAAGACTGGATaGTCTCCACTGACCGTCAGC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILCTKTG*SPLTVS
Trigger: GCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTTGGGACTATCTGCATaGTCACTACTGGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVLGLSA*SLLGRE
Trigger: TTCTCGGCCCAGTAGTGACAATGCAGATAGTCCCAA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCGATAAATTCTCTCTTTaGGGCCACTCTTGGGACTAT +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIDKFSL*GHSWDY
Trigger: ATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTATC...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGGATAAATTCTCTCTTTaGGGCCACTCTTGGGACTAT +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQDKFSL*GHSWDY
Trigger: ATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTATC...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGTCAGTGTCCTGAATaGTTTCACTTTTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQICQCPE*FHFSLG
Trigger: ACCCAGAGAAAAGTGAAACAATTCAGGACACTGACA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGTCTTTCTTGCATAGTTaGGATATAGTGGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVSFLHS*DIVAMQ
Trigger: CTGCATCGCCACTATATCCAAACTATGCAAGAAAGA...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCGTCTGTTCCTTCATTaGCTAACCCACTCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILRLFLH*LTHSGA
Trigger: TGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCAAATCAAAGACAGTATaGAGAGTACGAGGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSKSKTV*RVRGVP
Trigger: TGGCACACCTCGTACTCTCAATACTGTCTTTGATTT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAAATCAAAGACAGTATaGAGAGTACGAGGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVKSKTV*RVRGVP
Trigger: TGGCACACCTCGTACTCTCAATACTGTCTTTGATTT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCGCTGATAGAACACTaGATCAAGAACCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQSLIEH*IKNLQC
Trigger: ACACTGAAGGTTCTTGATCAAGTGTTCTATCAGCGA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGAATAATATCCTTCAGTaGAAGACGACGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQNNILQ*KTTTQW
Trigger: CCACTGTGTCGTCGTCTTCAACTGAAGGATATTATT...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGAATAATATCCTTCAGTaGAAGACGACGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVNNILQ*KTTTQW
Trigger: CCACTGTGTCGTCGTCTTCAACTGAAGGATATTATT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGGGCTAAACGTGTGTTaGCTATCAGCTGTAGATGCC +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVGLNVC*LSAVDA
Trigger: GGCATCTACAGCTGATAGCAAACACACGTTTAGCCC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCAAGCTTTGTTATCTGTaGCCACTTGTCGAACCAACA +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIKLCYL*PLVEPT
Trigger: TGTTGGTTCGACAAGTGGCAACAGATAACAAAGCTT...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCTGTCCCATCTGTATGTaGTTCCTTTGCAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQICPICM*FLCKLS
Trigger: AGACAGTTTGCAAAGGAACAACATACAGATGGGACA...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCTGTCCCATCTGTATGTaGTTCCTTTGCAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSCPICM*FLCKLS
Trigger: AGACAGTTTGCAAAGGAACAACATACAGATGGGACA...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAA +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKLLQEQ*ILGCTK
Trigger: TTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS CCA 90 bp TATCTCCTTCGCCAGGTGTTGACTGTGGTAATGGAATTGGCTTTGTaGATTGCTCCTTCACTGATGCAGCCATCCGACAGATTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: YLLRQVLTVVMELAL*IAPSLMQPSDRLGP
Trigger: AGGACCTAATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAGGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGTCAACGGATGCGGCTaGGAGCAAAACAAGTTATCT +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVVNGCG*EQNKLS
Trigger: AGATAACTTGTTTTGCTCCAAGCCGCATCCGTTGAC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGCTGCTCCATCTTCTTaGACAGACTGTACGAAGACT +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVAAPSS*TDCTKT
Trigger: AGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTTTGGGACTATCTGCATaGTCACTACTGGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLGLSA*SLLGRE
Trigger: TTCTCGGCCCAGTAGTGACAATGCAGATAGTCCCAA...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGTGTCAGTGTCCTGAATaGTTTCACTTTTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKCQCPE*FHFSLG
Trigger: ACCCAGAGAAAAGTGAAACAATTCAGGACACTGACA...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTGGATGGACTCTTTCTaGCATAGTTTGGATATAGTG +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQWMDSF*HSLDIV
Trigger: CACTATATCCAAACTATGCAAGAAAGAGTCCATCCA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGGCCATTCTGTGTATTaGGCAATATTATCCAACAGA +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSGHSVY*AILSNR
Trigger: TCTGTTGGATAATATTGCCAAATACACAGAATGGCC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGACTGTGGTAATGGAATaGGCTTTGTGGATTGCTCCT +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQTVVME*ALWIAP
Trigger: AGGAGCAATCCACAAAGCCAATTCCATTACCACAGT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGTGGACTGTAACAAGTaGCAATGTCACCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVVDCNK*QCHQFQ
Trigger: CTGGAACTGGTGACATTGCAACTTGTTACAGTCCAC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp ACAGGACTAGTGATTCTCTCCATATTCCCAGATGCTCCAGGTGAATaGGGAGATGTCATGATGGGAGACATATGTCCAATGACTGACGGC +
Preference number: 5 (lower is better)
Translates to: TGLVILSIFPDAPGE*GDVMMGDICPMTDG
Trigger: GCCGTCAGTCATTGGACATATGTCTCCCATCATGACATCTCCTCATTCACCTGGAGCATCTGGGAATATGGAGAGAATCACTAGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 90 bp GTCTATAGTCTTAGCTACTTGGGAGGCCAAAGTGGGTACACAGTTTaGGCCCAGGAGTTTGAGGTTACAGTTAACCTCTGTACTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VYSLSYLGGQSGYTV*AQEFEVTVNLCTAA
Trigger: AGCTGCAGTACAGAGGTTAACTGTAACCTCAAACTCCTGGGCTCAAACTGTGTACCCACTTTGGCCTCCCAAGTAGCTAAGACTATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS GCA 90 bp CGCAACGCTGAACAAGACCTGTGGGGTCAAAATCATGTGATGCAATaGGCTCAACTTTCTGCTTCTTATCTGTTGGTGACTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: RNAEQDLWGQNHVMQ*AQLSASYLLVTLGS
Trigger: TGAACCGAGAGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGGTCTTGTTCAGCGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356641.7
CDS CCA 90 bp CTGTGGCTTTGGATAACTGCTCTTGCAGCTGAGGAATGTGTTTCTTaGCCTCTTGGATCTCTTTTAGCAATCTTTGGGCAGGTGTTCGGT +
Preference number: 5 (lower is better)
Translates to: LWLWITALAAEECVS*PLGSLLAIFGQVFG
Trigger: ACCGAACACCTGCCCAAAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTTATCCAAAGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCACTCATTGGGGCCCTaGGCGAGAGGTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMHSLGP*ARGPPF
Trigger: AAAAGGAGGACCTCTCGCCAAGGGCCCCAATGAGTG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCACTGTGTGCCACTCATaGGGGCCCTTGGCGAGAGGT +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIATVCHS*GPLARG
Trigger: ACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAGT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGGTCAGCCCAAATCCATaGTCATCTTTCTGGATGATT +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQVSPNP*SSFWMI
Trigger: AATCATCCAGAAAGATGACAATGGATTTGGGCTGAC...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCACCTCCAGATGATTaGAATGAGTCACCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPPPDD*NESPEF
Trigger: GAACTCTGGTGACTCATTCAAATCATCTGGAGGTGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGCAGAGCCTGTGGCTTaGGATAACTGCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRAEPVA*DNCSCS
Trigger: GCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGTCAGTGTCCTGAATaGTTTCACTTTTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQCQCPE*FHFSLG
Trigger: ACCCAGAGAAAAGTGAAACAATTCAGGACACTGACA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCAGCTGCACTGTCCATaGATCTGTTCATGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVQLHCP*ICSCSV
Trigger: TACTGAACATGAACAGATCAATGGACAGTGCAGCTG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCATGCGACGAGTTTCTTaGGAATTGGTATGTTTATAC +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSMRRVS*ELVCLY
Trigger: GTATAAACATACCAATTCCAAAGAAACTCGTCGCAT...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTCTTTCTTGCATAGTTaGGATATAGTGGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQSFLHS*DIVAMQ
Trigger: CTGCATCGCCACTATATCCAAACTATGCAAGAAAGA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGACCAATCCGACCCCGTTaGTGCTCCAAATTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRPIRPR*CSKFRG
Trigger: GCCTCGAAATTTGGAGCACAAACGGGGTCGGATTGG...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGATACTTTGCTTGATTTaGGGAAGAAATCCAATCCGA +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVILCLI*GRNPIR
Trigger: TCGGATTGGATTTCTTCCCAAAATCAAGCAAAGTAT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACCATGGCTCTGCCAATaGCACTGTTGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRPWLCQ*HCCHDG
Trigger: GCCGTCATGACAACAGTGCAATTGGCAGAGCCATGG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTTTCTCCAACTTGCTTaGATCCTGTATCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: WSQDVVRHGRYSKSNNLQFLQLA*ILYHSL
Trigger: AAGAGAATGATACAGGATCAAAGCAAGTTGGAGAAA...CTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GGATGTGGTGAGACACGGCCGATACTCCAAATCCAACAACCTGCAGTCACCTCCGTACTTAGTAAGCCTTaGCATTTGAGTGGGAATAAT +
Preference number: 5 (lower is better)
Translates to: GCGETRPILQIQQPAVTSVLSKP*HLSGNN
Trigger: ATTATTCCCACTCAAATGCAAAGGCTTACTAAGTAC...GGAGGTGACTGCAGGTTGTTGGATTTGGAGTATCGGCCGTGTCTCACCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCCTTCTCCCTTTCTGTaGGCCATTCTGTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILPSPFL*AILCIW
Trigger: CCAAATACACAGAATGGCCAACAGAAAGGGAGAAGG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAAGCTTTGTTATCTGTaGCCACTTGTCGAACCAACA +
Preference number: 5 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELKLCYL*PLVEPT
Trigger: TGTTGGTTCGACAAGTGGCAACAGATAACAAAGCTT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCCACTCCACCCTTGGCTATCCTTTTGACTCAGGGCCCTTTGGCACCATCAGTGATGACGAATAAAGCTTaGTTATCTGTTGCCACTTGT +
Preference number: 5 (lower is better)
Translates to: STPPLAILLTQGPLAPSVMTNKA*LSVATC
Trigger: ACAAGTGGCAACAGATAACAAAGCTTTATTCGTCAT...CACTGATGGTGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGTAATGGAATTGGCTTaGTGGATTGCTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVVMELA*WIAPSL
Trigger: CAGTGAAGGAGCAATCCACAAAGCCAATTCCATTAC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTGTCCCATCTGTATGTaGTTCCTTTGCAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQCPICM*FLCKLS
Trigger: AGACAGTTTGCAAAGGAACAACATACAGATGGGACA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAGGCTGTTCTGTATCTaGGGAAATGTTGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVRLFCI*GNVASL
Trigger: AAGACTGGCAACATTTCCCAAGATACAGAACAGCCT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp TCTGCATCCACACTGGAGCCAGGATGTGGTGAGACACGGCCGATACTCCAAATCCCATTTGGTTTTTACTaGTTCCTCCTAAGAGATACA +
Preference number: 5 (lower is better)
Translates to: SASTLEPGCGETRPILQIPFGFY*FLLRDT
Trigger: TGTATCTCTTAGGAGGAACAAGTAAAAACCAAATGG...GATTTGGAGTATCGGCCGTGTCTCACCACATCCTGGCTCCAGTGTGGATGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGAGGCCCTGCTAATTTaGTATTTTGAGGTCCTATGC +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVEALLI*YFEVLC
Trigger: GCATAGGACCTCAAAATACAAAATTAGCAGGGCCTC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp TCCTCTCCTGGTCCGCTGAACCATGTCAGCAAATCTTCCCCAATCTaGTCGATAACAGAGGTCTCATTTCTCTTTCGAACAGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: SSPGPLNHVSKSSPI*SITEVSFLFRTAFI
Trigger: AATGAAGGCTGTTCGAAAGAGAAATGAGACCTCTGTTATCGATCAGATTGGGGAAGATTTGCTGACATGGTTCAGCGGACCAGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
CDS CCA 90 bp TCTCCAACTTGCTTTGATCCTGTATCATTCTCTTTCCCTCCTTCCTaGGAAAAAGAGGCCCCTGAAGCTACAGAAGACATGGAATTGGCA +
Preference number: 5 (lower is better)
Translates to: SPTCFDPVSFSFPPS*EKEAPEATEDMELA
Trigger: TGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGGAAGGAGGGAAAGAGAATGATACAGGATCAAAGCAAGTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGGTCAGCCCAAATCCATaGTCATCTTTCTGGATGATT +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVVSPNP*SSFWMI
Trigger: AATCATCCAGAAAGATGACAATGGATTTGGGCTGAC...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTAGAGTTCCATTCACCTaGATGATTCGATCACCTGTC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILRVPFT*MIRSPV
Trigger: GACAGGTGATCGAATCATCAAGGTGAATGGAACTCT...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCTTTCTTGCATAGTTaGGATATAGTGGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVSFLHS*DIVAMQ
Trigger: CTGCATCGCCACTATATCCAAACTATGCAAGAAAGA...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGAATAATATCCTTCAGTaGAAGACGACGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVNNILQ*KTTTQW
Trigger: CCACTGTGTCGTCGTCTTCAACTGAAGGATATTATT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGTTATCTGTTGCCACTaGTCGAACCAACACTGTACT +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILVICCH*SNQHCT
Trigger: AGTACAGTGTTGGTTCGACAAGTGGCAACAGATAAC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTGTATGTTGTTCCTTaGCAAACTGTCTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLYVVP*QTVSQP
Trigger: TGGCTGAGAGACAGTTTGCAAAGGAACAACATACAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGCAGTTACCAACACCTaGCCTGCAGTGTCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRAVTNT*PAVSSV
Trigger: TACACTGGACACTGCAGGCAAGGTGTTGGTAACTGC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCTGGGAAGGTAGCTTTCTTTGTACACCACCCCTGTGCCCTTTAGCAGGGAAGCCATTTGGTTTTTACTaGTTCCTCCTAAGAGATACA +
Preference number: 5 (lower is better)
Translates to: LWEGSFLCTPPLCPLAGKPFGFY*FLLRDT
Trigger: TGTATCTCTTAGGAGGAACAAGTAAAAACCAAATGG...CTTCCCTGCTAAAGGGCACAGGGGTGGTGTACAAAGAAAGCTACCTTCCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGAGGCCCTGCTAATTTaGTATTTTGAGGTCCTATGC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILEALLI*YFEVLC
Trigger: GCATAGGACCTCAAAATACAAAATTAGCAGGGCCTC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp TACGCAACGCTGAACAAGACCATATATCTCGGATCTACTCTCCTCTaGACTAGACTTTGTCTTCTTGGAGGAGCTATCTGTGGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: YATLNKTIYLGSTLL*TRLCLLGGAICGVK
Trigger: TTTGACCCCACAGATAGCTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGATCCGAGATATATGGTCTTGTTCAGCGTTGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS GCA 90 bp TCTTCTTGGAGGAGCTATCTGTGGGGTCAAAATCATGTGATGCAATaGGCTCAACTTTCTGCTTCTTATCTGTTGGTGACTCTCGGTTCA +
Preference number: 5 (lower is better)
Translates to: SSWRSYLWGQNHVMQ*AQLSASYLLVTLGS
Trigger: TGAACCGAGAGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGATAGCTCCTCCAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCTCCTTTTATCCAACTaGCATTTTACAGTAACACCT +
Preference number: 5 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELLLLSN*HFTVTP
Trigger: AGGTGTTACTGTAAAATGCAAGTTGGATAAAAGGAG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCGAGGTGCTATACGGGTaGAGGGACTTCCGACAAGTG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAEVLYG*RDFRQV
Trigger: CACTTGTCGGAAGTCCCTCAACCCGTATAGCACCTC...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATGCGACGAGTTTCTTaGGAATTGGTATGTTTATAC +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQMRRVS*ELVCLY
Trigger: GTATAAACATACCAATTCCAAAGAAACTCGTCGCAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATACTTTGCTTGATTTaGGGAAGAAATCCAATCCGA +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQILCLI*GRNPIR
Trigger: TCGGATTGGATTTCTTCCCAAAATCAAGCAAAGTAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGTTTCTCCAACTTGCTTaGATCCTGTATCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQFLQLA*ILYHSL
Trigger: AAGAGAATGATACAGGATCAAAGCAAGTTGGAGAAA...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGACAAGCTGCTGCCAGTaGGGTGGATCTGTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMTSCCQ*GGSVSK
Trigger: CTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGTCCAGATTACTTTCAGCATCTaGCACAAAAGTCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: ATIHPRAGSYQHLACSVQITFSI*HKSLKS
Trigger: CGATTTCAGACTTTTGTGCAAGATGCTGAAAGTAAT...CTGGACACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGGCTAAACGTGTGTTaGCTATCAGCTGTAGATGCC +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGLNVC*LSAVDA
Trigger: GGCATCTACAGCTGATAGCAAACACACGTTTAGCCC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTGGTGTGAATCTGGGATaGCGATTTGATAATCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILGVNLG*RFDNLL
Trigger: GAGAAGATTATCAAATCGCAATCCCAGATTCACACC...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTGGGCACCTTGGGACTaGACTAATCCCAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASWAPWD*TNPRWF
Trigger: GAACCACCTGGGATTAGTCAAGTCCCAAGGTGCCCA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGCAGTTACCAACACCTaGCCTGCAGTGTCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPAVTNT*PAVSSV
Trigger: TACACTGGACACTGCAGGCAAGGTGTTGGTAACTGC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGCCATTTGGTTTTTACTaGTTCCTCCTAAGAGATACA +
Preference number: 5 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELPFGFY*FLLRDT
Trigger: TGTATCTCTTAGGAGGAACAAGTAAAAACCAAATGG...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ATGTGCTGGTCTGCAATTTTTAGGGTCAATCACGGCCCCGTGTGGAAAGAGCTGAAATACAGAGTTTTATaGTCTCCATTCCTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: MCWSAIFRVNHGPVWKELKYRVL*SPFLGG
Trigger: ACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT...CAGCTCTTTCCACACGGGGCCGTGATTGACCCTAAAAATTGCAGACCAGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 90 bp TCTTTAAGTGTTCAAGGTCAGCCTCTATCTTATGAATGTACTCCATaGTCTGGCTCTGTGAATCTGCACAAGAGGAGGGACTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: SLSVQGQPLSYECTP*SGSVNLHKRRDSGS
Trigger: AGATCCAGAGTCCCTCCTCTTGTGCAGATTCACAGAGCCAGATCATGGAGTACATTCATAAGATAGAGGCTGACCTTGAACACTTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp CTTTCCTCCACCTTCTTTAAGTGTTCAAGGTCAGCCTCTATCTTATaGATGTACTCCATGATCTGGCTCTGTGAATCTGCACAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSSTFFKCSRSASIL*MYSMIWLCESAQEE
Trigger: CTCCTCTTGTGCAGATTCACAGAGCCAGATCATGGAGTACATTCATAAGATAGAGGCTGACCTTGAACACTTAAAGAAGGTGGAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS CCA 90 bp GTTACTGCAAAAGGTAGCAGCAGCATGTTTCAATTTCTCCTCTCCTaGTCCGCTGAACTGTGCCAAGAATGCAAAGAACACAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: VTAKGSSSMFQFLLS*SAELCQECKEHKRE
Trigger: TTCTCTTTTGTGTTCTTTGCATTCTTGGCACAGTTCAGCGGACCAGGAGAGGAGAAATTGAAACATGCTGCTGCTACCTTTTGCAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS-3UTR CAA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTGTACGAAGACTGGATaGTCTCCACTGACCGTCAGC +
Preference number: 5 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASCTKTG*SPLTVS
Trigger: GCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGCTGCTCCATCTTCTTaGACAGACTGTACGAAGACT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRAAPSS*TDCTKT
Trigger: AGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGCGAGTTTCTTTGGAATaGGTATGTTTATACAGGTCT +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVRVSLE*VCLYRS
Trigger: AGACCTGTATAAACATACCAATTCCAAAGAAACTCG...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAAAGTCAATCGGTCCTaGTCTCGCTCTGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRKVNRS*SRSASS
Trigger: ACTTGATGCAGAGCGAGACAAGGACCGATTGACTTT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAACTTTCGAAAGGGCTTaGGTGTCCCATGTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRTFERA*VSHVQS
Trigger: TGACTGAACATGGGACACCAAAGCCCTTTCGAAAGT...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTTCCAGGGCGAAAGGTaGGTTACTGCAAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPFQGER*VTAKGS
Trigger: GCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGAA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTAACGCTACTATTCATCCTAGAGCAGGCAGTTACCAACACCTTGCCTGCAGTGATTACTTTCAGCATCTaGCACAAAAGTCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: LTLLFILEQAVTNTLPAVITFSI*HKSLKS
Trigger: CGATTTCAGACTTTTGTGCAAGATGCTGAAAGTAAT...CACTGCAGGCAAGGTGTTGGTAACTGCCTGCTCTAGGATGAATAGTAGCGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACCTTCTCCCTTTCTGTaGGCCATTCTGTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRPSPFL*AILCIW
Trigger: CCAAATACACAGAATGGCCAACAGAAAGGGAGAAGG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACCCCTTGGCTATCCTTTaGACTCAGGGCCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHPLAIL*TQGPLA
Trigger: TGCCAAAGGGCCCTGAGTCAAAAGGATAGCCAAGGG...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATTTTCCACTCCACCCTaGGCTATCCTTTTGACTCAG +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRFSTPP*AILLTQ
Trigger: CTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATTTTCCACTCCACCCTaGGCTATCCTTTTGACTCAG +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRFSTPP*AILLTQ
Trigger: CTGAGTCAAAAGGATAGCCAAGGGTGGAGTGGAAAA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCTAGACTTTGTCTTCTaGGAGGAGCTATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMLDFVF*EELSVG
Trigger: CCCCACAGATAGCTCCTCCAAGAAGACAAAGTCTAG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp GCAGGGTCAAATTGTGAAACTACATGGTGTAAGAAAACAGCCAAATaGGCCGGGCGAGATTTTAGTAATTCAATGCTCTGGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: AGSNCETTWCKKTAK*AGRDFSNSMLWKQL
Trigger: CAGCTGTTTCCAGAGCATTGAATTACTAAAATCTCGCCCGGCTCATTTGGCTGTTTTCTTACACCATGTAGTTTCACAATTTGACCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS TCA 90 bp GTGCCACCAGTTCATAAATCTGAGCGCCATTGTCTGACATGGAAATaGCGAATAAAGCTTTGTTATCTGTTGCCACTTGTCGAACCAACA +
Preference number: 5 (lower is better)
Translates to: VPPVHKSERHCLTWK*RIKLCYLLPLVEPT
Trigger: TGTTGGTTCGACAAGTGGCAACAGATAACAAAGCTTTATTCGTCATTTCCATGTCAGACAATGGCGCTCAGATTTATGAACTGGTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGAGCAGTTCTGCCTTCACCATATCTTTTTCCACTCCACCCTTGGCTATCCTTCTCCTTTTATCCAACTaGCATTTTACAGTAACACCT +
Preference number: 5 (lower is better)
Translates to: VSSSAFTISFSTPPLAILLLLSN*HFTVTP
Trigger: AGGTGTTACTGTAAAATGCAAGTTGGATAAAAGGAG...AAGGATAGCCAAGGGTGGAGTGGAAAAAGATATGGTGAAGGCAGAACTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAGCAGAGCCTGTGGCTTaGGATAACTGCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKAEPVA*DNCSCS
Trigger: GCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGC...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACAGCTGCACTGTCCATaGATCTGTTCATGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRQLHCP*ICSCSV
Trigger: TACTGAACATGAACAGATCAATGGACAGTGCAGCTG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGTAATGGAATTGGCTTaGTGGATTGCTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRVMELA*WIAPSL
Trigger: CAGTGAAGGAGCAATCCACAAAGCCAATTCCATTAC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAACTGTGGTAATGGAATaGGCTTTGTGGATTGCTCCT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRTVVME*ALWIAP
Trigger: AGGAGCAATCCACAAAGCCAATTCCATTACCACAGT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCTCCTTCGCCAGGTGTaGACTGTGGTAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIALLRQV*TVVMEL
Trigger: CAATTCCATTACCACAGTCAACACCTGGCGAAGGAG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACTGTATGTTGTTCCTTaGCAAACTGTCTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLYVVP*QTVSQP
Trigger: TGGCTGAGAGACAGTTTGCAAAGGAACAACATACAG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGAGCAAAAGATTCAGTaGAAGTCCGTGGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINREQKIQ*KSVDCN
Trigger: GTTACAGTCCACGGACTTCAACTGAATCTTTTGCTC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGCTTTTATCTGAGTGCTaGTCTGTGAGGGCTGATCCA +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMLLSEC*SVRADP
Trigger: TGGATCAGCCCTCACAGACAAGCACTCAGATAAAAG...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGATTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAA +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRLLQEQ*ILGCTK
Trigger: TTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAA...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATTGCTTCAGGAGCAGTaGATCCTTGGGTGTACTAAA +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRLLQEQ*ILGCTK
Trigger: TTTAGTACACCCAAGGATCAACTGCTCCTGAAGCAA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATGGACAGCAGAGAGCTaGGAATACTGTATAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRWTAES*EYCIVK
Trigger: CTTCACTATACAGTATTCCAAGCTCTCTGCTGTCCA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp TCCATTGAACTCTTCAGAAGAGTGTACCTGGACTCTGCAAACCAGTaGCTGAAATGCCATGCTGCTCCTCTTTTAATTTTGAAGGATCTT +
Preference number: 5 (lower is better)
Translates to: SIELFRRVYLDSANQ*LKCHAAPLLILKDL
Trigger: AAGATCCTTCAAAATTAAAAGAGGAGCAGCATGGCATTTCAGTCACTGGTTTGCAGAGTCCAGGTACACTCTTCTGAAGAGTTCAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528681.1
ENST00000529970.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCCAGCTGCACTGTCCATaGATCTGTTCATGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPQLHCP*ICSCSV
Trigger: TACTGAACATGAACAGATCAATGGACAGTGCAGCTG...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCAAAGTCAATCGGTCCTaGTCTCGCTCTGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAKVNRS*SRSASS
Trigger: ACTTGATGCAGAGCGAGACAAGGACCGATTGACTTT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCACTTTCGAAAGGGCTTaGGTGTCCCATGTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIATFERA*VSHVQS
Trigger: TGACTGAACATGGGACACCAAAGCCCTTTCGAAAGT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTTTCCAGGGCGAAAGGTaGGTTACTGCAAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLFQGER*VTAKGS
Trigger: GCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGAA...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGGGCTAAACGTGTGTTaGCTATCAGCTGTAGATGCC +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHGLNVC*LSAVDA
Trigger: GGCATCTACAGCTGATAGCAAACACACGTTTAGCCC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGTTATCTGTTGCCACTaGTCGAACCAACACTGTACT +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPVICCH*SNQHCT
Trigger: AGTACAGTGTTGGTTCGACAAGTGGCAACAGATAAC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACCTCCTTCGCCAGGTGTaGACTGTGGTAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHLLRQV*TVVMEL
Trigger: CAATTCCATTACCACAGTCAACACCTGGCGAAGGAG...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGGTGTGAATCTGGGATaGCGATTTGATAATCTTCTC +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRGVNLG*RFDNLL
Trigger: GAGAAGATTATCAAATCGCAATCCCAGATTCACACC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGACATCCTTCTCTTCCTaGTTAACTGCTCCATCACCT +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMTSFSS*LTAPSP
Trigger: AGGTGATGGAGCAGTTAACAAGGAAGAGAAGGATGT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTGACTCAGGGCCCTTaGGCACCATCAGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHLTQGP*APSVQK
Trigger: TTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACCTAGACTTTGTCTTCTaGGAGGAGCTATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYLDFVF*EELSVG
Trigger: CCCCACAGATAGCTCCTCCAAGAAGACAAAGTCTAG...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAAGAAAGCTTCCACTTaGAAATATGGAAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMKKAST*KYGSPT
Trigger: CGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCTT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCTGCCTTATAGGTTTTTaGAGGGGAAACCTGGATCAC +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPCLIGF*RGNLDH
Trigger: GTGATCCAGGTTTCCCCTCAAAAAACCTATAAGGCA...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532993.5
CDS GCA 90 bp ATTTCACAAGGTTTTAGTCCCAGTAACACTTCTCGACTAACAAGCTaGTGCCAGTTGGGTGGATCTGTCTCTAAGTCATTTTCAAATTGT +
Preference number: 5 (lower is better)
Translates to: ISQGFSPSNTSRLTS*CQLGGSVSKSFSNC
Trigger: ACAATTTGAAAATGACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCGAGAAGTGTTACTGGGACTAAAACCTTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS CCA 90 bp TTCTTACACCCTGAAGCCTTTACAACAACTACTGTCTTACTACTCTaGGAAGCAAATCCTTGGCATACTAGCATTCCTTCTTACTCAGTA +
Preference number: 5 (lower is better)
Translates to: FLHPEAFTTTTVLLL*EANPWHTSIPSYSV
Trigger: TACTGAGTAAGAAGGAATGCTAGTATGCCAAGGATTTGCTTCCCAGAGTAGTAAGACAGTAGTTGTTGTAAAGGCTTCAGGGTGTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACTGCCTTATAGGTTTTTaGAGGGGAAACCTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHCLIGF*RGNLSV
Trigger: CACCGACAGGTTTCCCCTCAAAAAACCTATAAGGCA...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTGGGACTATCTGCATaGTCACTACTGGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLGLSA*SLLGRE
Trigger: TTCTCGGCCCAGTAGTGACAATGCAGATAGTCCCAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCTTTTGGGCCACTCTaGGGACTATCTGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSFGPL*GLSALS
Trigger: TGACAATGCAGATAGTCCCAAGAGTGGCCCAAAAGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCAAATCAAAGACAGTATaGAGAGTACGAGGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPKSKTV*RVRGVP
Trigger: TGGCACACCTCGTACTCTCAATACTGTCTTTGATTT...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTCGCTGATAGAACACTaGATCAAGAACCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSLIEH*IKNLQC
Trigger: ACACTGAAGGTTCTTGATCAAGTGTTCTATCAGCGA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTCCAGGGCGAAAGGTaGGTTACTGCAAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKFQGER*VTAKGS
Trigger: GCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGAGGCCATTCTGTGTATTaGGCAATATTATCCAACAGA +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRGHSVY*AILSNR
Trigger: TCTGTTGGATAATATTGCCAAATACACAGAATGGCC...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGGGTGTGAATCTGGGATaGCGATTTGATAATCTTCTC +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMGVNLG*RFDNLL
Trigger: GAGAAGATTATCAAATCGCAATCCCAGATTCACACC...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCAGGCTGTTCTGTATCTaGGGAAATGTTGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIARLFCI*GNVASL
Trigger: AAGACTGGCAACATTTCCCAAGATACAGAACAGCCT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTGGACAGCAGAGAGCTaGGAATACTGTATAGTGAAG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAWTAES*EYCIVK
Trigger: CTTCACTATACAGTATTCCAAGCTCTCTGCTGTCCA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTGACTCAGGGCCCTTaGGCACCATCAGTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLTQGP*APSVQK
Trigger: TTTTTGCACTGATGGTGCCAAAGGGCCCTGAGTCAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGCACAATGTAACCATTaGGTTTTTACTTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRAQCNH*VFTCSS
Trigger: GGAGGAACAAGTAAAAACCAAATGGTTACATTGTGC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACACTCTACATGTAATTaGCCACTTCATAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRHSTCN*PLHSKG
Trigger: TCCTTTGCTATGAAGTGGCAAATTACATGTAGAGTG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCAAGAAAGCTTCCACTTaGAAATATGGAAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAKKAST*KYGSPT
Trigger: CGTGGGGCTTCCATATTTCAAAGTGGAAGCTTTCTT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS GCA 90 bp GGTGTGCTGATCGATCTAGAAAGAACTGATGAAACTCAAGGAAGATaGGACGAGTTTCTTTGGAATTGGTATGTTTATACAGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: GVLIDLERTDETQGR*DEFLWNWYVYTGLN
Trigger: ATTCAGACCTGTATAAACATACCAATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTCATCAGTTCTTTCTAGATCGATCAGCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS-3UTR CAA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTCTGCTTCTTATCTGTaGGTGACTCTCGGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASSASYL*VTLGSK
Trigger: TTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACAGAGTTCCATTCACCTaGATGATTCGATCACCTGTC +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHRVPFT*MIRSPV
Trigger: GACAGGTGATCGAATCATCAAGGTGAATGGAACTCT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGACGAGTTTCTTTGGAATaGGTATGTTTATACAGGTCT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRRVSLE*VCLYRS
Trigger: AGACCTGTATAAACATACCAATTCCAAAGAAACTCG...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAAAAGTCAATCGGTCCTaGTCTCGCTCTGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKKVNRS*SRSASS
Trigger: ACTTGATGCAGAGCGAGACAAGGACCGATTGACTTT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTCAAAGACAGACTGCATCTAATTCCATCATCCTGAAAGGAAGATCGAACAGCCTTCATTaGTTCATTCAATCCAATATG +
Preference number: 5 (lower is better)
Translates to: TSLTQRQTASNSIILKGRSNSLH*FIQSNM
Trigger: CATATTGGATTGAATGAACAAATGAAGGCTGTTCGA...TCTTCCTTTCAGGATGATGGAATTAGATGCAGTCTGTCTTTGAGTGAGACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAAGTAAGCCTTTGCATTaGAGTGGGAATAATATCCTT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRSKPLH*SGNNIL
Trigger: AAGGATATTATTCCCACTCAAATGCAAAGGCTTACT...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GAGGGCACCAATGAAAGATGTGAGCAACGGATGAACTCCTTGTTTATTAACAGAGTACTTAGTAAGCCTTaGCATTTGAGTGGGAATAAT +
Preference number: 5 (lower is better)
Translates to: EGTNERCEQRMNSLFINRVLSKP*HLSGNN
Trigger: ATTATTCCCACTCAAATGCAAAGGCTTACTAAGTAC...TCTGTTAATAAACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAACCTTCTCCCTTTCTGTaGGCCATTCTGTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKPSPFL*AILCIW
Trigger: CCAAATACACAGAATGGCCAACAGAAAGGGAGAAGG...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGTAATGGAATTGGCTTaGTGGATTGCTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFVMELA*WIAPSL
Trigger: CAGTGAAGGAGCAATCCACAAAGCCAATTCCATTAC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCCAGGCATACAAACAGGTTAATTTCCGCAAAGTACATTTGAATAGTCTTCTGTATGTTGTTCCTTaGCAAACTGTCTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: QSQAYKQVNFRKVHLNSLLYVVP*QTVSQP
Trigger: TGGCTGAGAGACAGTTTGCAAAGGAACAACATACAG...AAGACTATTCAAATGTACTTTGCGGAAATTAACCTGTTTGTATGCCTGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACGAGCAAAAGATTCAGTaGAAGTCCGTGGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHEQKIQ*KSVDCN
Trigger: GTTACAGTCCACGGACTTCAACTGAATCTTTTGCTC...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTTACTAAAATGTTACTaGCCTGGCTATCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFLLKCY*PGYPGV
Trigger: CACCCCAGGATAGCCAGGCAAGTAACATTTTAGTAA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCCACACATCCTTCTCTTCCTaGTTAACTGCTCCATCACCT +
Preference number: 5 (lower is better)
Translates to: QSSSNSKPYIDFREESFHTSFSS*LTAPSP
Trigger: AGGTGATGGAGCAGTTAACAAGGAAGAGAAGGATGT...GTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGCACAATGTAACCATTaGGTTTTTACTTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPAQCNH*VFTCSS
Trigger: GGAGGAACAAGTAAAAACCAAATGGTTACATTGTGC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS TCA 90 bp CTTATAATAAGACCCTACACTAAAGCAGAATGTCACCAGTTGCTATaGTTCTACTCAGTAGTTTCAAGCTTTTCTGAATCCCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LIIRPYTKAECHQLL*FYSVVSSFSESPER
Trigger: TCTCTCTGGGGATTCAGAAAAGCTTGAAACTACTGAGTAGAATCATAGCAACTGGTGACATTCTGCTTTAGTGTAGGGTCTTATTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGATAAATTCTCTCTTTaGGGCCACTCTTGGGACTAT +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFDKFSL*GHSWDY
Trigger: ATAGTCCCAAGAGTGGCCCAAAAGAGAGAATTTATC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTGGATGGACTCTTTCTaGCATAGTTTGGATATAGTG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAWMDSF*HSLDIV
Trigger: CACTATATCCAAACTATGCAAGAAAGAGTCCATCCA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGTCGAACAGCCTTCATTaGTTCATTCAATCCAATATG +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSNSLH*FIQSNM
Trigger: CATATTGGATTGAATGAACAAATGAAGGCTGTTCGA...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp CTCCAGGTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGAGTAAGCCTTTGCATTaGAGTGGGAATAATATCCTT +
Preference number: 5 (lower is better)
Translates to: LQVLKFYWPYNQQYLWLMSKPLH*SGNNIL
Trigger: AAGGATATTATTCCCACTCAAATGCAAAGGCTTACT...CATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTACCTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AACCATATATCGACTTCAGAGAAGAAAGCTTCCACTTTGAAATATGGAAGCCCCGTACTTAGTAAGCCTTaGCATTTGAGTGGGAATAAT +
Preference number: 5 (lower is better)
Translates to: NHISTSEKKASTLKYGSPVLSKP*HLSGNN
Trigger: ATTATTCCCACTCAAATGCAAAGGCTTACTAAGTAC...GGGGCTTCCATATTTCAAAGTGGAAGCTTTCTTCTCTGAAGTCGATATATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCAAGCTTTGTTATCTGTaGCCACTTGTCGAACCAACA +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFKLCYL*PLVEPT
Trigger: TGTTGGTTCGACAAGTGGCAACAGATAACAAAGCTT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATCTGGGATTGCGATTaGATAATCTTCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAIWDCD*IIFSNF
Trigger: GAAGTTGGAGAAGATTATCAAATCGCAATCCCAGAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAATTACTAAAATGTTACTaGCCTGGCTATCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKLLKCY*PGYPGV
Trigger: CACCCCAGGATAGCCAGGCAAGTAACATTTTAGTAA...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCCACTCTACATGTAATTaGCCACTTCATAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAHSTCN*PLHSKG
Trigger: TCCTTTGCTATGAAGTGGCAAATTACATGTAGAGTG...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCAAAAGCACAGAAATGTaGGTATGTGAAGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFKSTEM*VCEEAQ
Trigger: CTGGGCTTCTTCACATACCAACATTTCTGTGCTTTT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 90 bp CTAAACGTGTGTTTGCTATCAGCTGTAGATGCCAGAATCTTACTATaGCACCTTAAAACCAGTCTATCATCCTGCTTTTGTAACAATACA +
Preference number: 5 (lower is better)
Translates to: LNVCLLSAVDARILL*HLKTSLSSCFCNNT
Trigger: TGTATTGTTACAAAAGCAGGATGATAGACTGGTTTTAAGGTGTCATAGTAAGATTCTGGCATCTACAGCTGATAGCAAACACACGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 90 bp AAGCGTAAACTTGATGTGTCACAAGGCACAGTATACATTTACTGCTaGACTACTGTAAAAGGTATACACAGAAAAAGCACTGGTCACAAA +
Preference number: 5 (lower is better)
Translates to: KRKLDVSQGTVYIYC*TTVKGIHRKSTGHK
Trigger: TTTGTGACCAGTGCTTTTTCTGTGTATACCTTTTACAGTAGTTCAGCAGTAAATGTATACTGTGCCTTGTGACACATCAAGTTTACGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS GCA 90 bp CAACAACAACAACAACAACAACAACAACAACAACAAAACCCACTCTaGCAGAGAATATCTTTATTTTGGCAACACACTATTAAGGCGAGA +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQQQQQNPL*QRISLFWQHTIKAR
Trigger: TCTCGCCTTAATAGTGTGTTGCCAAAATAAAGATATTCTCTGGCAGAGTGGGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528681.1
CDS CCA 90 bp CTAGAAAGAACTGATGAAACTCAAGGAAGATGCGACGAGTTTCTTTaGAATTGGTATGTTTATACAGGTCTGAATAGAGATAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: LERTDETQGRCDEFL*NWYVYTGLNRDNRA
Trigger: TGCTCTGTTATCTCTATTCAGACCTGTATAAACATACCAATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTCATCAGTTCTTTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CCA 90 bp TTCTGTTGGCCATTCTGTGTATTTGGCAATATTATCCAACAGAAGTaGGTACTTAGTAAGCCTTTGCATTTGAGTGGGAATAATATCCTT +
Preference number: 5 (lower is better)
Translates to: FCWPFCVFGNIIQQK*VLSKPLHLSGNNIL
Trigger: AAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGATAATATTGCCAAATACACAGAATGGCCAACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000531616.1
ENST00000532993.5
CDS CCA 90 bp CCACTCCCCTTGGAAACAGTAAATATCCTTTGCTCACTATACACTTaGTTATCTGACTTTAACACTTTCTGTACACTTCTGTACATTCTT +
Preference number: 5 (lower is better)
Translates to: PLPLETVNILCSLYT*LSDFNTFCTLLYIL
Trigger: AAGAATGTACAGAAGTGTACAGAAAGTGTTAAAGTCAGATAACCAAGTGTATAGTGAGCAAAGGATATTTACTGTTTCCAAGGGGAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS CCA 90 bp GGGGTACTTAGTTCAGAAATAACGCTGAATGGAAACAAGGCATATTaGGAATTCAGTAAAATCATCCTAACAACTCCTTTCTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GVLSSEITLNGNKAY*EFSKIILTTPFSRN
Trigger: ATTTCTGGAGAAAGGAGTTGTTAGGATGATTTTACTGAATTCCCAATATGCCTTGTTTCCATTCAGCGTTATTTCTGAACTAAGTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS-3UTR CAA 90 bp AAATACAGAGTTTTATTGTCTCCATTCCTAGGAGGTGGCTATCAAAGAGCAAGTTTTCTCCAACTTGCTTaGATCCTGTATCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: KYRVLLSPFLGGGYQRASFLQLA*ILYHSL
Trigger: AAGAGAATGATACAGGATCAAAGCAAGTTGGAGAAA...ACTTGCTCTTTGATAGCCACCTCCTAGGAATGGAGACAATAAAACTCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCTCGAACAGCCTTCATTaGTTCATTCAATCCAATATG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIASNSLH*FIQSNM
Trigger: CATATTGGATTGAATGAACAAATGAAGGCTGTTCGA...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATTACTTTCAGCATCTaGCACAAAAGTCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAITFSI*HKSLKS
Trigger: CGATTTCAGACTTTTGTGCAAGATGCTGAAAGTAAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GTGCGTCATAAAAGCTGGCCTACCTCACTGAACTTTATACTTAAAAATAGTTACGGCCATTCTGTGTATTaGGCAATATTATCCAACAGA +
Preference number: 5 (lower is better)
Translates to: VRHKSWPTSLNFILKNSYGHSVY*AILSNR
Trigger: TCTGTTGGATAATATTGCCAAATACACAGAATGGCC...GTAACTATTTTTAAGTATAAAGTTCAGTGAGGTAGGCCAGCTTTTATGACGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS-3UTR CAA 90 bp GTACTAAAATTTTACTGGCCTTATAATCAGCAGTACCTGTGGCTAATGATAGCCATGACGAATAAAGCTTaGTTATCTGTTGCCACTTGT +
Preference number: 5 (lower is better)
Translates to: VLKFYWPYNQQYLWLMIAMTNKA*LSVATC
Trigger: ACAAGTGGCAACAGATAACAAAGCTTTATTCGTCAT...GGCTATCATTAGCCACAGGTACTGCTGATTATAAGGCCAGTAAAATTTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCATCTGGGATTGCGATTaGATAATCTTCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFIWDCD*IIFSNF
Trigger: GAAGTTGGAGAAGATTATCAAATCGCAATCCCAGAT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCGCACAATGTAACCATTaGGTTTTTACTTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFAQCNH*VFTCSS
Trigger: GGAGGAACAAGTAAAAACCAAATGGTTACATTGTGC...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCATACATTCGACATCCTaGGAAAGGCATTTGTCAGAT +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFIHSTS*ERHLSD
Trigger: ATCTGACAAATGCCTTTCCAAGGATGTCGAATGTAT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532993.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCTCCTTGGAAAGGCATTaGTCAGATGATTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFSLERH*SDDFTD
Trigger: GTCAGTAAAATCATCTGACAAATGCCTTTCCAAGGA...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532993.5
CDS TCA 90 bp AAGATGACAAGAATTCAAAGCCCATTCATGTTATTTGGAGGAACCTaGCCCAAACATATTAGAGATAATCACCTTCCTACCATAAACAAG +
Preference number: 5 (lower is better)
Translates to: KMTRIQSPFMLFGGT*PKHIRDNHLPTINK
Trigger: CTTGTTTATGGTAGGAAGGTGATTATCTCTAATATGTTTGGGTCAGGTTCCTCCAAATAACATGAATGGGCTTTGAATTCTTGTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS TCA 90 bp AACCTTCAGTGTTCGAACATGAGCTCTTTCAGTGTAGAACAATTCTaGACAGGAAAGAGATATGAAATGTTGCCTTACTTAGAACAATTC +
Preference number: 5 (lower is better)
Translates to: NLQCSNMSSFSVEQF*TGKRYEMLPYLEQF
Trigger: GAATTGTTCTAAGTAAGGCAACATTTCATATCTCTTTCCTGTTCAGAATTGTTCTACACTGAAAGAGCTCATGTTCGAACACTGAAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530747.5
CDS-3UTR CAA 90 bp GACCAAAGCTCTAGTAATTCAAAACCATATATCGACTTCAGAGAAGAAAGCTTCATGACGAATAAAGCTTaGTTATCTGTTGCCACTTGT +
Preference number: 5 (lower is better)
Translates to: DQSSSNSKPYIDFREESFMTNKA*LSVATC
Trigger: ACAAGTGGCAACAGATAACAAAGCTTTATTCGTCAT...GAAGCTTTCTTCTCTGAAGTCGATATATGGTTTTGAATTACTAGAGCTTTGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAATCTGGGATTGCGATTaGATAATCTTCTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKIWDCD*IIFSNF
Trigger: GAAGTTGGAGAAGATTATCAAATCGCAATCCCAGAT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS-3UTR CAA 90 bp AGATCCAAGTTGATCCACCTAAAAACACAGATCAATTTAGGACAGAAACAGAAAATACTTTGCTTGATTTaGGGAAGAAATCCAATCCGA +
Preference number: 5 (lower is better)
Translates to: RSKLIHLKTQINLGQKQKILCLI*GRNPIR
Trigger: TCGGATTGGATTTCTTCCCAAAATCAAGCAAAGTAT...TTTCTGTTTCTGTCCTAAATTGATCTGTGTTTTTAGGTGGATCAACTTGGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 72 bp CCGCTGGCGCCGGCGGAGAGGTCCCGCGGCCCGAGGTaGCAGGGACCCGGGTCTCTCAGCGCCGCGGACTGC +
Preference number: 6 (lower is better)
Translates to: PLAPAERSRGPR*QGPGSLSAADC
Trigger: GCAGTCCGCGGCGCTGAGAGACCCGGGTCCCTGTCACCTCGGGCCGCGGGACCTCTCCGCCGGCGCCAGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 72 bp CTATCTGGGGCTGCCGGCTGCTCGTGGCCGCAGCGTTaGCCGCGTCTCCGGCCGTCCCGCGCCGGGCTCGCG +
Preference number: 6 (lower is better)
Translates to: LSGAAGCSWPQR*PRLRPSRAGLA
Trigger: CGCGAGCCCGGCGCGGGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS GCA 72 bp GGCCGGGGCCCTCCCTCCCGGCTCTCTATCTGGGGCTaGCGGCTGCTCGTGGCCGCAGCGTTGGCCGCGTCT +
Preference number: 6 (lower is better)
Translates to: GRGPPSRLSIWG*RLLVAAALAAS
Trigger: AGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGGAGGGAGGGCCCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 72 bp CCTCCCGGCTCTCTATCTGGGGCTGCCGGCTGCTCGTaGCCGCAGCGTTGGCCGCGTCTCCGGCCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: PPGSLSGAAGCS*PQRWPRLRPSR
Trigger: GCGGGACGGCCGGAGACGCGGCCAACGCTGCGGCCACGAGCAGCCGGCAGCCCCAGATAGAGAGCCGGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS GCA 72 bp CTCCTTCTGTGCTCGCCGCCCTCACCAGGCTCCCGGTaGTGGGACGAGCCGCTGGCGCCGGCGGAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LLLCSPPSPGSR*WDEPLAPAERS
Trigger: GGACCTCTCCGCCGGCGCCAGCGGCTCGTCCCAGCACCGGGAGCCTGGTGAGGGCGGCGAGCACAGAAGGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS TCA 72 bp GGGTCTCTCAGCGCCGCGGACTGCTCCCCATCCCTTTaGGGCCCGGACTCTTCCGCAATCGCCAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: GSLSAADCSPSL*GPDSSAIARGG
Trigger: GCCGCCTCTGGCGATTGCGGAAGAGTCCGGGCCTCAAAGGGATGGGGAGCAGTCCGCGGCGCTGAGAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397843.7
CDS CCA 72 bp CATGGCTCTGCCAATTGCACTGTTGTCATGACGGCTTaGTCTCCGTGGGGGTCCCAGGATGCTGGGGAATCC +
Preference number: 6 (lower is better)
Translates to: HGSANCTVVMTA*SPWGSQDAGES
Trigger: GGATTCCCCAGCATCCTGGGACCCCCACGGAGACCAAGCCGTCATGACAACAGTGCAATTGGCAGAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp TTCAGAGTCGGCAAGTGGAATCTGGGGCGACCCAGGTaGGCGTCCCTGAACAGTGAGAGCTACATAGGAACC +
Preference number: 6 (lower is better)
Translates to: FRVGKWNLGRPR*ASLNSESYIGT
Trigger: GGTTCCTATGTAGCTCTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAGATTCCACTTGCCGACTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp GCCAATTGCACTGTTGTCATGACGGCTTGGTCTCCGTaGGGGTCCCAGGATGCTGGGGAATCCTCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: ANCTVVMTAWSP*GSQDAGESSSL
Trigger: AAGCGAAGAGGATTCCCCAGCATCCTGGGACCCCCACGGAGACCAAGCCGTCATGACAACAGTGCAATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS GCA 72 bp TGGGTGGATTCCACAGCAGGGATGCCTGTCATGGGCTaGAGGGTAAGTGAGGAAGCAACCTCCTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: WVDSTAGMPVMG*RVSEEATSSSV
Trigger: CACAGATGAGGAGGTTGCTTCCTCACTTACCCTGCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS GCA 72 bp TGGGCCGAGAAGCATCTCCACTGCTACAGTCAGTCCTaGCCAGTACATCTCCAGGATCTGTTTCTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: WAEKHLHCYSQS*PVHLQDLFLPH
Trigger: GTGAGGCAGAAACAGATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTCGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp TGCCCAGTACATCTCCAGGATCTGTTTCTGCCTCACTaGCTGTTAGGGTGTCCCCTAAAGGTCTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: CPVHLQDLFLPH*LLGCPLKVWRV
Trigger: CACCCTCCAGACCTTTAGGGGACACCCTAACAGTCAGTGAGGCAGAAACAGATCCTGGAGATGTACTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp CCAGCGCTGCTGGACCAGAAATTCGGGGGTGAATGGTaGAATTGCCCCATCGGAGTGAGTATTCTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: PALLDQKFGGEW*NCPIGVSILRR
Trigger: TCTCCTCAGAATACTCACTCCGATGGGGCAATTTCACCATTCACCCCCGAATTTCTGGTCCAGCAGCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS GCA 72 bp CTGCATTGTCACTACTGGGCCGAGAAGCATCTCCACTaGTACAGTCAGTCCTGCCCAGTACATCTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LHCHYWAEKHLH*YSQSCPVHLQD
Trigger: ATCCTGGAGATGTACTGGGCAGGACTGACTGTAGCAGTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp TTGGGCCACTCTTGGGACTATCTGCATTGTCACTACTaGGCCGAGAAGCATCTCCACTGCTACAGTCAGTCC +
Preference number: 6 (lower is better)
Translates to: LGHSWDYLHCHY*AEKHLHCYSQS
Trigger: GGACTGACTGTAGCAGTGGAGATGCTTCTCGGCCCAGTAGTGACAATGCAGATAGTCCCAAGAGTGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp GTCTGTCTGCGGCCCCTGAGAGGCTGTTCTGTATCTTaGGAAATGTTGCCAGTCTTCCTGAACGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VCLRPLRGCSVS*EMLPVFLNALL
Trigger: GAGAAGAGCGTTCAGGAAGACTGGCAACATTTCCCAAGATACAGAACAGCCTCTCAGGGGCCGCAGACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CCA 72 bp AGTGAGTATTCTGAGGAGAATGTTGCTGCTGGTGGGTaGATTCCACAGCAGGGATGCCTGTCATGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SEYSEENVAAGG*IPQQGCLSWAA
Trigger: TGCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACCAGCAGCAACATTCTCCTCAGAATACTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS CCA 72 bp GTACACTGTAGAGTGGTTGTTTACCCTGTGATCACATaGCTGACCAGGAGCTGTGGCTCACTGTTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: VHCRVVVYPVIT*LTRSCGSLLLP
Trigger: GGGCAGCAACAGTGAGCCACAGCTCCTGGTCAGCCATGTGATCACAGGGTAAACAACCACTCTACAGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS CAA 72 bp AATTGCCCCATCGGAGTGAGTATTCTGAGGAGAATGTaGCTGCTGGTGGGTGGATTCCACAGCAGGGATGCC +
Preference number: 6 (lower is better)
Translates to: NCPIGVSILRRM*LLVGGFHSRDA
Trigger: GGCATCCCTGCTGTGGAATCCACCCACCAGCAGCAACATTCTCCTCAGAATACTCACTCCGATGGGGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS TCA 72 bp TTTGCTAACCCACTCTGGCGCAACTTGGCAGAGTCCTaGGGTTCAGGACTCACAGATGAGGGTGTGGATAAG +
Preference number: 6 (lower is better)
Translates to: FANPLWRNLAES*GSGLTDEGVDK
Trigger: CTTATCCACACCCTCATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000528225.5
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp AAACCTGTCGGTGATAGTAGACTGTGTGCCACTCATTaGGGCCCTTGGCGAGAGGTCCTCCTTTTATCCAAC +
Preference number: 6 (lower is better)
Translates to: KPVGDSRLCATH*GPWREVLLLSN
Trigger: GTTGGATAAAAGGAGGACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAGTCTACTATCACCGACAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS CCA 72 bp CTGTTCCTTCATTTGCTAACCCACTCTGGCGCAACTTaGCAGAGTCCTGAGGTTCAGGACTCACAGATGAGG +
Preference number: 6 (lower is better)
Translates to: LFLHLLTHSGAT*QSPEVQDSQMR
Trigger: CCTCATCTGTGAGTCCTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAATGAAGGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp CCTGGGAAAAAGAGGCCCCTGAAGCTACAGAAGACATaGAATTGGCAGGCAGGTATCCAGCGTCTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: PGKKRPLKLQKT*NWQAGIQRLFL
Trigger: AAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CAA 72 bp AATTGGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTaGCTAACCCACTCTGGCGCAACTTGGCAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: NWQAGIQRLFLH*LTHSGATWQSP
Trigger: AGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CAA 72 bp CGGCCCCTGAGAGGCTGTTCTGTATCTTGGGAAATGTaGCCAGTCTTCCTGAACGCTCTTCTCAGTCAAACC +
Preference number: 6 (lower is better)
Translates to: RPLRGCSVSWEM*PVFLNALLSQT
Trigger: GGTTTGACTGAGAAGAGCGTTCAGGAAGACTGGCAACATTTCCCAAGATACAGAACAGCCTCTCAGGGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CAA 72 bp TGTCTGTCTGCGGCCCCTGAGAGGCTGTTCTGTATCTaGGGAAATGTTGCCAGTCTTCCTGAACGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: CLSAAPERLFCI*GNVASLPERSS
Trigger: AGAAGAGCGTTCAGGAAGACTGGCAACATTTCCCAAGATACAGAACAGCCTCTCAGGGGCCGCAGACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CAA 72 bp ACTGCGGCACTGTTGACATTTTGCGCCAGAGAGTTCTaGGCTGTAGGGTCTAGCCCGTGCATTCTAAGACAC +
Preference number: 6 (lower is better)
Translates to: TAALLTFCAREF*AVGSSPCILRH
Trigger: GTGTCTTAGAATGCACGGGCTAGACCCTACAGCCAAGAACTCTCTGGCGCAAAATGTCAACAGTGCCGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS CAA 90 bp AAGACATGGAATTGGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTaGCTAACCCACTCTGGCGCAACTTGGCAGAGTCCTGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: KTWNWQAGIQRLFLH*LTHSGATWQSPEVQ
Trigger: CTGAACCTCAGGACTCTGCCAAGTTGCGCCAGAGTGGGTTAGCAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CAA 90 bp CCTTCCTGGGAAAAAGAGGCCCCTGAAGCTACAGAAGACATGGAATaGGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTTGCTAACCCA +
Preference number: 6 (lower is better)
Translates to: PSWEKEAPEATEDME*AGRYPASVPSFANP
Trigger: TGGGTTAGCAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CAA 90 bp GCTACTTGGGAGGCCAAAGTGGGTACACAGTTTGAGCCCAGGAGTTaGAGGTTACAGTTAACCTCTGTACTGCAGCTTGGGCAACAGAGT +
Preference number: 6 (lower is better)
Translates to: ATWEAKVGTQFEPRS*RLQLTSVLQLGQQS
Trigger: ACTCTGTTGCCCAAGCTGCAGTACAGAGGTTAACTGTAACCTCAAACTCCTGGGCTCAAACTGTGTACCCACTTTGGCCTCCCAAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS GCA 72 bp ATCACAGCCACGTTAAAACCCCAGGCTCCCTTTCCCTaGAGTAGATCATGCCATGCACAGCAGACACAAGAA +
Preference number: 6 (lower is better)
Translates to: ITATLKPQAPFP*SRSCHAQQTQE
Trigger: TTCTTGTGTCTGCTGTGCATGGCATGATCTACTGCAGGGAAAGGGAGCCTGGGGTTTTAACGTGGCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS CCA 72 bp CGCCAGGTGTTGACTGTGGTAATGGAATTGGCTTTGTaGATTGCTCCTTCACTGATGCAGCCATCCGACAGA +
Preference number: 6 (lower is better)
Translates to: RQVLTVVMELAL*IAPSLMQPSDR
Trigger: TCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp GCACATGTCCGCTCCTTCTCCAAAGTCAATCGGTCCTaGTCTCGCTCTGCATCAAGTTTAGTCAGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: AHVRSFSKVNRS*SRSASSLVSSL
Trigger: AAGCGAGCTGACTAAACTTGATGCAGAGCGAGACAAGGACCGATTGACTTTGGAGAAGGAGCGGACATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525960.1
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp CTTCGCCAGGTGTTGACTGTGGTAATGGAATTGGCTTaGTGGATTGCTCCTTCACTGATGCAGCCATCCGAC +
Preference number: 6 (lower is better)
Translates to: LRQVLTVVMELA*WIAPSLMQPSD
Trigger: GTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp GAGGCCAAAGTGGGTACACAGTTTGAGCCCAGGAGTTaGAGGTTACAGTTAACCTCTGTACTGCAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: EAKVGTQFEPRS*RLQLTSVLQLG
Trigger: CCCAAGCTGCAGTACAGAGGTTAACTGTAACCTCAAACTCCTGGGCTCAAACTGTGTACCCACTTTGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS CAA 90 bp CGCATGGCTGCTCCATCTTCTTTGACAGACTGTACGAAGACTGGATaGTCTCCACTGACCGTCAGCCCAAATCCATTGTCATCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RMAAPSSLTDCTKTG*SPLTVSPNPLSSFW
Trigger: CCAGAAAGATGACAATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGCCATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp GAGGAAGAGGAGGATGTAGGGAAAGAAGAAGGGTCATaGGAAAAGAAGGAGAGGAATGGTGGACAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: EEEEDVGKEEGS*EKKERNGGQRE
Trigger: CTCCCTCTGTCCACCATTCCTCTCCTTCTTTTCTCATGACCCTTCTTCTTTCCCTACATCCTCCTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS GCA 72 bp CTCCTTCTCCAAAGTCAATCGGTCCTTGTCTCGCTCTaGATCAAGTTTAGTCAGCTCGCTTTCAGCCAAGGT +
Preference number: 6 (lower is better)
Translates to: LLLQSQSVLVSL*IKFSQLAFSQG
Trigger: ACCTTGGCTGAAAGCGAGCTGACTAAACTTGATGCAGAGCGAGACAAGGACCGATTGACTTTGGAGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525960.1
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp GGTGATAGTAGACTGTGTGCCACTCATTGGGGCCCTTaGCGAGAGGTCCTCCTTTTATCCAACTTGCATTTT +
Preference number: 6 (lower is better)
Translates to: GDSRLCATHWGP*REVLLLSNLHF
Trigger: AAAATGCAAGTTGGATAAAAGGAGGACCTCTCGCCAAGGGCCCCAATGAGTGGCACACAGTCTACTATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356641.7
ENST00000397843.7
CDS CCA 72 bp GGCTGCTCCATCTTCTTTGACAGACTGTACGAAGACTaGATTGTCTCCACTGACCGTCAGCCCAAATCCATT +
Preference number: 6 (lower is better)
Translates to: GCSIFFDRLYED*IVSTDRQPKSI
Trigger: AATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp ATCTGGCTCTGTGAATCTGCACAAGAGGAGGGACTCTaGATCTCAAAACAGGAATACTCCATAGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: IWLCESAQEEGL*ISKQEYSIAPQ
Trigger: CTGGGGAGCTATGGAGTATTCCTGTTTTGAGATCCAGAGTCCCTCCTCTTGTGCAGATTCACAGAGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS CAA 72 bp AAGAGGCACTCATGGCATTTGAGGGAGAACTCGTCATaGTGGGGGACACTCACTATCACAATCCTACTCCCA +
Preference number: 6 (lower is better)
Translates to: KRHSWHLRENSS*WGTLTITILLP
Trigger: TGGGAGTAGGATTGTGATAGTGAGTGTCCCCCACAATGACGAGTTCTCCCTCAAATGCCATGAGTGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 90 bp TTTCTCAACAAGAGGCACTCATGGCATTTGAGGGAGAACTCGTCATaGTGGGGGACACTCACTATCACAATCCTACTCCCACCACTCTAC +
Preference number: 6 (lower is better)
Translates to: FLNKRHSWHLRENSS*WGTLTITILLPPLY
Trigger: GTAGAGTGGTGGGAGTAGGATTGTGATAGTGAGTGTCCCCCACAATGACGAGTTCTCCCTCAAATGCCATGAGTGCCTCTTGTTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS TCA 72 bp AGGAGATGTCATGATGGGAGACATATGTCCAATGACTaGCGGCTCTACTTCAGAGTCGGCAAGTGGAATCTG +
Preference number: 6 (lower is better)
Translates to: RRCHDGRHMSND*RLYFRVGKWNL
Trigger: CAGATTCCACTTGCCGACTCTGAAGTAGAGCCGTCAGTCATTGGACATATGTCTCCCATCATGACATCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp GCAGAGCCTGTGGCTTTGGATAACTGCTCTTGCAGCTaGGGAATGTGTTTCTTGGCCTCTTGGATCTCTTTT +
Preference number: 6 (lower is better)
Translates to: AEPVALDNCSCS*GMCFLASWISF
Trigger: AAAAGAGATCCAAGAGGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp ATCCAAATTCCTGAGCTCTTCAACATTTGGGTACTCTaGCAACTTCAGGCTGGAGGTATCAAGGCGACGCTG +
Preference number: 6 (lower is better)
Translates to: IQIPELFNIWVL*QLQAGGIKATL
Trigger: CAGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTCAGAGTACCCAAATGTTGAAGAGCTCAGGAATTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp CTTAGCTACTTGGGAGGCCAAAGTGGGTACACAGTTTaGGCCCAGGAGTTTGAGGTTACAGTTAACCTCTGT +
Preference number: 6 (lower is better)
Translates to: LSYLGGQSGYTV*AQEFEVTVNLC
Trigger: ACAGAGGTTAACTGTAACCTCAAACTCCTGGGCTCAAACTGTGTACCCACTTTGGCCTCCCAAGTAGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS TCA 72 bp GGTGCTATACGGGTTGAGGGACTTCCGACAAGTGATTaGGTGTCCTGGCAACATTCAGGGAAAAGAAACAGA +
Preference number: 6 (lower is better)
Translates to: GAIRVEGLPTSD*VSWQHSGKRNR
Trigger: TCTGTTTCTTTTCCCTGAATGTTGCCAGGACACTCAATCACTTGTCGGAAGTCCCTCAACCCGTATAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS TCA 72 bp TCAAATGTGCTACTGCCTGAGATAAGAACCATCACATaGCCCCTCCCCATGGTACCACCATCCCTATTTCTC +
Preference number: 6 (lower is better)
Translates to: SNVLLPEIRTIT*PLPMVPPSLFL
Trigger: GAGAAATAGGGATGGTGGTACCATGGGGAGGGGTCATGTGATGGTTCTTATCTCAGGCAGTAGCACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CCA 72 bp AAAAAGAGGCCCCTGAAGCTACAGAAGACATGGAATTaGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTTG +
Preference number: 6 (lower is better)
Translates to: KKRPLKLQKTWN*QAGIQRLFLHL
Trigger: CAAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp GCTCTTCAACATTTGGGTACTCTGACAACTTCAGGCTaGAGGTATCAAGGCGACGCTGATAATCTTCTAGGC +
Preference number: 6 (lower is better)
Translates to: ALQHLGTLTTSG*RYQGDADNLLG
Trigger: GCCTAGAAGATTATCAGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTCAGAGTACCCAAATGTTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000531616.1
ENST00000532993.5
CDS CCA 72 bp CACACCTTCTCAATGTTTCTCAACAAGAGGCACTCATaGCATTTGAGGGAGAACTCGTCATTGTGGGGGACA +
Preference number: 6 (lower is better)
Translates to: HTFSMFLNKRHS*HLRENSSLWGT
Trigger: TGTCCCCCACAATGACGAGTTCTCCCTCAAATGCCATGAGTGCCTCTTGTTGAGAAACATTGAGAAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 72 bp GCTCCATCTTCTTTGACAGACTGTACGAAGACTGGATaGTCTCCACTGACCGTCAGCCCAAATCCATTGTCA +
Preference number: 6 (lower is better)
Translates to: APSSLTDCTKTG*SPLTVSPNPLS
Trigger: TGACAATGGATTTGGGCTGACGGTCAGTGGAGACAATCCAGTCTTCGTACAGTCTGTCAAAGAAGATGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp GAAAAAGAGGCCCCTGAAGCTACAGAAGACATGGAATaGGCAGGCAGGTATCCAGCGTCTGTTCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: EKEAPEATEDME*AGRYPASVPSF
Trigger: AAATGAAGGAACAGACGCTGGATACCTGCCTGCCAATTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CAA 72 bp TATCTCCTTCGCCAGGTGTTGACTGTGGTAATGGAATaGGCTTTGTGGATTGCTCCTTCACTGATGCAGCCA +
Preference number: 6 (lower is better)
Translates to: YLLRQVLTVVME*ALWIAPSLMQP
Trigger: TGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAGGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp TCGGATCTACTCTCCTCTGAACTAGACTTTGTCTTCTaGGAGGAGCTATCTGCACAAGAGCGGGAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SDLLSSELDFVF*EELSAQEREKR
Trigger: CCTTTTCTCCCGCTCTTGTGCAGATAGCTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGATCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS CAA 90 bp CATTATCTCCTTCGCCAGGTGTTGACTGTGGTAATGGAATTGGCTTaGTGGATTGCTCCTTCACTGATGCAGCCATCCGACAGATTAGGT +
Preference number: 6 (lower is better)
Translates to: HYLLRQVLTVVMELA*WIAPSLMQPSDRLG
Trigger: ACCTAATCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAGGAGATAATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CAA 90 bp CTTCATCATTATCTCCTTCGCCAGGTGTTGACTGTGGTAATGGAATaGGCTTTGTGGATTGCTCCTTCACTGATGCAGCCATCCGACAGA +
Preference number: 6 (lower is better)
Translates to: LHHYLLRQVLTVVME*ALWIAPSLMQPSDR
Trigger: TCTGTCGGATGGCTGCATCAGTGAAGGAGCAATCCACAAAGCCAATTCCATTACCACAGTCAACACCTGGCGAAGGAGATAATGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000528681.1
ENST00000529970.5
ENST00000532993.5
CDS CAA 90 bp CCAATGCCCACCGTTCTTCTGAGACAGGCAGGTGTGAATCTGGGATaGCGATTTGATAATCTTCTCCAACTTCCTTTAGTGTCCCATCTG +
Preference number: 6 (lower is better)
Translates to: PMPTVLLRQAGVNLG*RFDNLLQLPLVSHL
Trigger: CAGATGGGACACTAAAGGAAGTTGGAGAAGATTATCAAATCGCAATCCCAGATTCACACCTGCCTGTCTCAGAAGAACGGTGGGCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS GCA 72 bp TGTTCAGTCACCCTTTCTACTTCACATTCCTCCTCCTaGACTTGGTCTAATGGAGGTGGTGGGAAATCAAAG +
Preference number: 6 (lower is better)
Translates to: CSVTLSTSHSSS*TWSNGGGGKSK
Trigger: CTTTGATTTCCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGAAGTAGAAAGGGTGACTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp GTCACCCTTTCTACTTCACATTCCTCCTCCTGCACTTaGTCTAATGGAGGTGGTGGGAAATCAAAGACAGTA +
Preference number: 6 (lower is better)
Translates to: VTLSTSHSSSCT*SNGGGGKSKTV
Trigger: TACTGTCTTTGATTTCCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGAAGTAGAAAGGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532823.5
ENST00000532993.5
CDS CCA 72 bp AAAGGTAGCAGCAGCATGTTTCAATTTCTCCTCTCCTaGTCCGCTGAACCATGTCAGCAAATCTTCCCCAAT +
Preference number: 6 (lower is better)
Translates to: KGSSSMFQFLLS*SAEPCQQIFPN
Trigger: ATTGGGGAAGATTTGCTGACATGGTTCAGCGGACCAGGAGAGGAGAAATTGAAACATGCTGCTGCTACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
CDS CCA 72 bp AAAGGTAGCAGCAGCATGTTTCAATTTCTCCTCTCCTaGTCCGCTGAACTGTGCCAAGAATGCAAAGAACAC +
Preference number: 6 (lower is better)
Translates to: KGSSSMFQFLLS*SAELCQECKEH
Trigger: GTGTTCTTTGCATTCTTGGCACAGTTCAGCGGACCAGGAGAGGAGAAATTGAAACATGCTGCTGCTACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS CAA 90 bp TTTCACACCTTCTCAATGTTTCTCAACAAGAGGCACTCATGGCATTaGAGGGAGAACTCGTCATTGTGGGGGACACTCACTATCACAATC +
Preference number: 6 (lower is better)
Translates to: FHTFSMFLNKRHSWH*RENSSLWGTLTITI
Trigger: GATTGTGATAGTGAGTGTCCCCCACAATGACGAGTTCTCCCTCAAATGCCATGAGTGCCTCTTGTTGAGAAACATTGAGAAGGTGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 90 bp CCACATCCGGCCAGCATTTTAACAGATAATAGAGCACATTCTCCATaGAACTCTTCAGAAGAGTGTACCTGGACTCTGCAAACCAGTGAC +
Preference number: 6 (lower is better)
Translates to: PHPASILTDNRAHSP*NSSEECTWTLQTSD
Trigger: GTCACTGGTTTGCAGAGTCCAGGTACACTCTTCTGAAGAGTTCAATGGAGAATGTGCTCTATTATCTGTTAAAATGCTGGCCGGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529970.5
CDS TCA 72 bp GCAACGCTGAACAAGACCTGTGGGGTCAAAATCATGTaGTGCAATGCGCTCAACTTTCTGCTTCTTATCTGT +
Preference number: 6 (lower is better)
Translates to: ATLNKTCGVKIM*CNALNFLLLIC
Trigger: ACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGGTCTTGTTCAGCGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356641.7
CDS TCA 72 bp GGTCCGCTGAACCATGTCAGCAAATCTTCCCCAATCTaGTCGATAACAGAGGTCTCATTTCTCTTTCGAACA +
Preference number: 6 (lower is better)
Translates to: GPLNHVSKSSPI*SITEVSFLFRT
Trigger: TGTTCGAAAGAGAAATGAGACCTCTGTTATCGATCAGATTGGGGAAGATTTGCTGACATGGTTCAGCGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
CDS GCA 72 bp GGTTTTAGTCCCAGTAACACTTCTCGACTAACAAGCTaGTGCCAGTTGGGTGGATCTGTCTCTAAGTCATTT +
Preference number: 6 (lower is better)
Translates to: GFSPSNTSRLTS*CQLGGSVSKSF
Trigger: AAATGACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCGAGAAGTGTTACTGGGACTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS CCA 72 bp TGGATAACTGCTCTTGCAGCTGAGGAATGTGTTTCTTaGCCTCTTGGATCTCTTTTAGCAATCTTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: WITALAAEECVS*PLGSLLAIFGQ
Trigger: CTGCCCAAAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACACATTCCTCAGCTGCAAGAGCAGTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp CTCCAAAAGCTACACTGTCAAACTTTCGAAAGGGCTTaGGTGTCCCATGTTCAGTCACCCTTTCTACTTCAC +
Preference number: 6 (lower is better)
Translates to: LQKLHCQTFERA*VSHVQSPFLLH
Trigger: GTGAAGTAGAAAGGGTGACTGAACATGGGACACCAAAGCCCTTTCGAAAGTTTGACAGTGTAGCTTTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp CTTCTTGGAGGAGCTATCTGTGGGGTCAAAATCATGTaGTGCAATGCGCTCAACTTTCTGCTTCTTATCTGT +
Preference number: 6 (lower is better)
Translates to: LLGGAICGVKIM*CNALNFLLLIC
Trigger: ACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGATAGCTCCTCCAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS GCA 72 bp GAACAAGACCTGTGGGGTCAAAATCATGTGATGCAATaGGCTCAACTTTCTGCTTCTTATCTGTTGGTGACT +
Preference number: 6 (lower is better)
Translates to: EQDLWGQNHVMQ*AQLSASYLLVT
Trigger: AGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGGTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356641.7
CDS GCA 72 bp AGGAGCTATCTGTGGGGTCAAAATCATGTGATGCAATaGGCTCAACTTTCTGCTTCTTATCTGTTGGTGACT +
Preference number: 6 (lower is better)
Translates to: RSYLWGQNHVMQ*AQLSASYLLVT
Trigger: AGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCCCACAGATAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS GCA 72 bp TCACTGAATTACCTTTCTACTTCACATTCCTCCTCCTaGACTTGGTCTAATGGAGGTGGTGGGAAATCAAAG +
Preference number: 6 (lower is better)
Translates to: SLNYLSTSHSSS*TWSNGGGGKSK
Trigger: CTTTGATTTCCCACCACCTCCATTAGACCAAGTGCAGGAGGAGGAATGTGAAGTAGAAAGGTAATTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612968.1
CDS CCA 72 bp TCCAAAAGCTACACTGTCAAACTTTCGAAAGGGCTTTaGTGTCCCATGTTCAGTCACCCTTTCTACTTCACA +
Preference number: 6 (lower is better)
Translates to: SKSYTVKLSKGL*CPMFSHPFYFT
Trigger: TGTGAAGTAGAAAGGGTGACTGAACATGGGACACCAAAGCCCTTTCGAAAGTTTGACAGTGTAGCTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp TTTTCCGTAGCTCTGAGGGTGACAGAATTCCTTCTCTaGATACTCGCTGATAGAACACTTGATCAAGAACCT +
Preference number: 6 (lower is better)
Translates to: FSVALRVTEFLL*ILADRTLDQEP
Trigger: AGGTTCTTGATCAAGTGTTCTATCAGCGAGTATCCAGAGAAGGAATTCTGTCACCCTCAGAGCTACGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS CAA 72 bp CCTTTGAACTTCTGGATGGACTCTTTCTTGCATAGTTaGGATATAGTGGCGATGCAGATCCTCAGGAATGAG +
Preference number: 6 (lower is better)
Translates to: PLNFWMDSFLHS*DIVAMQILRNE
Trigger: CTCATTCCTGAGGATCTGCATCGCCACTATATCCAAACTATGCAAGAAAGAGTCCATCCAGAAGTTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525960.1
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CAA 72 bp CCCAGTAACACTTCTCGACTAACAAGCTGCTGCCAGTaGGGTGGATCTGTCTCTAAGTCATTTTCAAATTGT +
Preference number: 6 (lower is better)
Translates to: PSNTSRLTSCCQ*GGSVSKSFSNC
Trigger: ACAATTTGAAAATGACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCGAGAAGTGTTACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS CAA 72 bp ACCGTTCTTCTGAGACAGGCAGGTGTGAATCTGGGATaGCGATTTGATAATCTTCTCCAACTTCCTTTAGTG +
Preference number: 6 (lower is better)
Translates to: TVLLRQAGVNLG*RFDNLLQLPLV
Trigger: CACTAAAGGAAGTTGGAGAAGATTATCAAATCGCAATCCCAGATTCACACCTGCCTGTCTCAGAAGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CAA 90 bp GGTTTTAGTCCCAGTAACACTTCTCGACTAACAAGCTGCTGCCAGTaGGGTGGATCTGTCTCTAAGTCATTTTCAAATTGTTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: GFSPSNTSRLTSCCQ*GGSVSKSFSNCSSS
Trigger: TGAGGATGAACAATTTGAAAATGACTTAGAGACAGATCCACCCAACTGGCAGCAGCTTGTTAGTCGAGAAGTGTTACTGGGACTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000525222.1
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS TCA 72 bp TCAGTACCAAAATCATCATCTTCTGCTCCAATAATATaGGGTGCTATACGGGTTGAGGGACTTCCGACAAGT +
Preference number: 6 (lower is better)
Translates to: SVPKSSSSAPII*GAIRVEGLPTS
Trigger: ACTTGTCGGAAGTCCCTCAACCCGTATAGCACCTCATATTATTGGAGCAGAAGATGATGATTTTGGTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp AAGGAACACCATGAAGCAAGCTCCAAAGGGCAAGGCTaGATTAGCTACATTAGCTTACCATATATCTCGGAT +
Preference number: 6 (lower is better)
Translates to: KEHHEASSKGQG*ISYISLPYISD
Trigger: ATCCGAGATATATGGTAAGCTAATGTAGCTAATTCAGCCTTGCCCTTTGGAGCTTGCTTCATGGTGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS TCA 72 bp CATGCTAATTCTGTTCTAATCAACTCATCCCTCCGATaGGTGCTTTTTGAGGACTTGTGGACTCAGTTCCTT +
Preference number: 6 (lower is better)
Translates to: HANSVLINSSLR*VLFEDLWTQFL
Trigger: AAGGAACTGAGTCCACAAGTCCTCAAAAAGCACTCATCGGAGGGATGAGTTGATTAGAACAGAATTAGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS GCA 72 bp CTCTTCTCAGTCAAACCTAGCTGTTGCACCAGCAACTaGTTCAACAAACCCAAATTTCTTAGTGCATCCAAT +
Preference number: 6 (lower is better)
Translates to: LFSVKPSCCTSN*FNKPKFLSASN
Trigger: ATTGGATGCACTAAGAAATTTGGGTTTGTTGAAGCAGTTGCTGGTGCAACAGCTAGGTTTGACTGAGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CCA 72 bp CCTGAAGCCTTTACAACAACTACTGTCTTACTACTCTaGGAAGCAAATCCTTGGCATACTAGCATTCCTTCT +
Preference number: 6 (lower is better)
Translates to: PEAFTTTTVLLL*EANPWHTSIPS
Trigger: AGAAGGAATGCTAGTATGCCAAGGATTTGCTTCCCAGAGTAGTAAGACAGTAGTTGTTGTAAAGGCTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS CAA 72 bp GTGATGCAATGCGCTCAACTTTCTGCTTCTTATCTGTaGGTGACTCTCGGTTCAAAATACTTCCATGCCTTA +
Preference number: 6 (lower is better)
Translates to: VMQCAQLSASYL*VTLGSKYFHAL
Trigger: TAAGGCATGGAAGTATTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530388.1
ENST00000532993.5
CDS CAA 72 bp CAGAATTCCTTCTCTGGATACTCGCTGATAGAACACTaGATCAAGAACCTTCAGTGTTCGAACATGAGCTCT +
Preference number: 6 (lower is better)
Translates to: QNSFSGYSLIEH*IKNLQCSNMSS
Trigger: AGAGCTCATGTTCGAACACTGAAGGTTCTTGATCAAGTGTTCTATCAGCGAGTATCCAGAGAAGGAATTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000532993.5
ENST00000612968.1
CDS CAA 72 bp TTTCTGACGAGATTTGATCATTTCCAGGGCGAAAGGTaGGTTACTGCAAAAGGTAGCAGCAGCATGTTTCAA +
Preference number: 6 (lower is better)
Translates to: FLTRFDHFQGER*VTAKGSSSMFQ
Trigger: TTGAAACATGCTGCTGCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGAAATGATCAAATCTCGTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 72 bp CAACTTCCTTTAGTGTCCCATCTGTATGTTGTTCCTTaGCAAACTGTCTCTCAGCCACAAACAGATCACGTA +
Preference number: 6 (lower is better)
Translates to: QLPLVSHLYVVP*QTVSQPQTDHV
Trigger: TACGTGATCTGTTTGTGGCTGAGAGACAGTTTGCAAAGGAACAACATACAGATGGGACACTAAAGGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS CAA 90 bp AGAATCCTTTTTCTGACGAGATTTGATCATTTCCAGGGCGAAAGGTaGGTTACTGCAAAAGGTAGCAGCAGCATGTTTCAATTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RILFLTRFDHFQGER*VTAKGSSSMFQFLL
Trigger: GAGGAGAAATTGAAACATGCTGCTGCTACCTTTTGCAGTAACCAACCTTTCGCCCTGGAAATGATCAAATCTCGTCAGAAAAAGGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 90 bp GGCAATATTATCCAACAGAAGTGGGTACTTAGTAAGCCTTTGCATTaGAGTGGGAATAATATCCTTCAGTTGAAGACGACGACACAGTGG +
Preference number: 6 (lower is better)
Translates to: GNIIQQKWVLSKPLH*SGNNILQLKTTTQW
Trigger: CCACTGTGTCGTCGTCTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGATAATATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 90 bp AATCTTCTCCAACTTCCTTTAGTGTCCCATCTGTATGTTGTTCCTTaGCAAACTGTCTCTCAGCCACAAACAGATCACGTACCTCTGATT +
Preference number: 6 (lower is better)
Translates to: NLLQLPLVSHLYVVP*QTVSQPQTDHVPLI
Trigger: AATCAGAGGTACGTGATCTGTTTGTGGCTGAGAGACAGTTTGCAAAGGAACAACATACAGATGGGACACTAAAGGAAGTTGGAGAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000526067.1
ENST00000532993.5
CDS GCA 72 bp GGGTCAAAATCATGTGATGCAATGCGCTCAACTTTCTaGTTCTTATCTGTTGGTGACTCTCGGTTCAAAATA +
Preference number: 6 (lower is better)
Translates to: GSKSCDAMRSTF*FLSVGDSRFKI
Trigger: TATTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGAAAGTTGAGCGCATTGCATCACATGATTTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530388.1
ENST00000532993.5
CDS CAA 72 bp AAGCCTTTGCATTTGAGTGGGAATAATATCCTTCAGTaGAAGACGACGACACAGTGGATTACTTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: KPLHLSGNNILQ*KTTTQWITFSI
Trigger: GATGCTGAAAGTAATCCACTGTGTCGTCGTCTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 72 bp ATCCAACAGAAGTGGGTACTTAGTAAGCCTTTGCATTaGAGTGGGAATAATATCCTTCAGTTGAAGACGACG +
Preference number: 6 (lower is better)
Translates to: IQQKWVLSKPLH*SGNNILQLKTT
Trigger: CGTCGTCTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 72 bp GCCAGCATTTTAACAGATAATAGAGCACATTCTCCATaGAACTCTTCAGAAGAGTGTACCTGGACTCTGCAA +
Preference number: 6 (lower is better)
Translates to: ASILTDNRAHSP*NSSEECTWTLQ
Trigger: TTGCAGAGTCCAGGTACACTCTTCTGAAGAGTTCAATGGAGAATGTGCTCTATTATCTGTTAAAATGCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529970.5
CDS CAA 90 bp GTACTTAGTAAGCCTTTGCATTTGAGTGGGAATAATATCCTTCAGTaGAAGACGACGACACAGTGGATTACTTTCAGCATCTTGCACAAA +
Preference number: 6 (lower is better)
Translates to: VLSKPLHLSGNNILQ*KTTTQWITFSILHK
Trigger: TTTGTGCAAGATGCTGAAAGTAATCCACTGTGTCGTCGTCTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS TCA 72 bp CTGCTCTATAGATTTGTGGCTCTATTAAAGATGACCTaGTTTCCCTTCGAGGCCAAATTTGGAATCTTCCTA +
Preference number: 6 (lower is better)
Translates to: LLYRFVALLKMT*FPFEAKFGIFL
Trigger: TAGGAAGATTCCAAATTTGGCCTCGAAGGGAAATCAGGTCATCTTTAATAGAGCCACAAATCTATAGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS TCA 72 bp AGACCCTACACTAAAGCAGAATGTCACCAGTTGCTATaGTTCTACTCAGTAGTTTCAAGCTTTTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: RPYTKAECHQLL*FYSVVSSFSES
Trigger: GGATTCAGAAAAGCTTGAAACTACTGAGTAGAATCATAGCAACTGGTGACATTCTGCTTTAGTGTAGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS CCA 72 bp AAGCTGCTTAAGATTTACTTACTTTCGAAAGGGCTTTaGTGTCCCATGTTCAGTCACCCTAAAACAATGGAA +
Preference number: 6 (lower is better)
Translates to: KLLKIYLLSKGL*CPMFSHPKTME
Trigger: TTCCATTGTTTTAGGGTGACTGAACATGGGACACCAAAGCCCTTTCGAAAGTAAGTAAATCTTAAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612968.1
CDS CAA 72 bp TTTCCTGAGATGCGTAAATTAACATCCTTCTCTTCCTaGTTAACTGCTCCATCACCTTCTGATGGATTCTCA +
Preference number: 6 (lower is better)
Translates to: FPEMRKLTSFSS*LTAPSPSDGFS
Trigger: TGAGAATCCATCAGAAGGTGATGGAGCAGTTAACAAGGAAGAGAAGGATGTTAATTTACGCATCTCAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000532993.5
CDS CAA 90 bp GTATTTGGCAATATTATCCAACAGAAGTGGGTACTTAGTAAGCCTTaGCATTTGAGTGGGAATAATATCCTTCAGTTGAAGACGACGACA +
Preference number: 6 (lower is better)
Translates to: VFGNIIQQKWVLSKP*HLSGNNILQLKTTT
Trigger: TGTCGTCGTCTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGATAATATTGCCAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 90 bp CTTATCAGTAGCCAAAATACTCTGGAAGGAAGAAAAAGCGTAAACTaGATGTGTCACAAGGCACAGTATACATTTACTGCTGAACTACTG +
Preference number: 6 (lower is better)
Translates to: LISSQNTLEGRKSVN*MCHKAQYTFTAELL
Trigger: CAGTAGTTCAGCAGTAAATGTATACTGTGCCTTGTGACACATCAAGTTTACGCTTTTTCTTCCTTCCAGAGTATTTTGGCTACTGATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS TCA 72 bp TGTTTGCTATCAGCTGTAGATGCCAGAATCTTACTATaGCACCTTAAAACCAGTCTATCATCCTGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: CLLSAVDARILL*HLKTSLSSCFC
Trigger: ACAAAAGCAGGATGATAGACTGGTTTTAAGGTGTCATAGTAAGATTCTGGCATCTACAGCTGATAGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000532993.5
CDS TCA 72 bp GAGAGTCATTTGCACAGCAGTTATAGTGGCTATAGCTaGAGTTGTATAAACAGATCCGCAAGTTTTAAACTG +
Preference number: 6 (lower is better)
Translates to: ESHLHSSYSGYS*SCINRSASFKL
Trigger: CAGTTTAAAACTTGCGGATCTGTTTATACAACTTCAGCTATAGCCACTATAACTGCTGTGCAAATGACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528225.5
CDS TCA 72 bp AGAATTCAAAGCCCATTCATGTTATTTGGAGGAACCTaGCCCAAACATATTAGAGATAATCACCTTCCTACC +
Preference number: 6 (lower is better)
Translates to: RIQSPFMLFGGT*PKHIRDNHLPT
Trigger: GGTAGGAAGGTGATTATCTCTAATATGTTTGGGTCAGGTTCCTCCAAATAACATGAATGGGCTTTGAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS CCA 72 bp CCATTCTGTGTATTTGGCAATATTATCCAACAGAAGTaGGTACTTAGTAAGCCTTTGCATTTGAGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: PFCVFGNIIQQK*VLSKPLHLSGN
Trigger: ATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGATAATATTGCCAAATACACAGAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000531616.1
ENST00000532993.5
CDS TCA 72 bp CTACGCAAGTGTCGAGTTGTTAGAGCCTTGGTTTTATaGCATATTACTGCTTATACCATGATTCAACTTAAC +
Preference number: 6 (lower is better)
Translates to: LRKCRVVRALVL*HITAYTMIQLN
Trigger: GTTAAGTTGAATCATGGTATAAGCAGTAATATGTCATAAAACCAAGGCTCTAACAACTCGACACTTGCGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS CCA 72 bp GAAACTCAAGGAAGATGCGACGAGTTTCTTTGGAATTaGTATGTTTATACAGGTCTGAATAGAGATAACAGA +
Preference number: 6 (lower is better)
Translates to: ETQGRCDEFLWN*YVYTGLNRDNR
Trigger: TCTGTTATCTCTATTCAGACCTGTATAAACATACCAATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CCA 72 bp ACTGATGAAACTCAAGGAAGATGCGACGAGTTTCTTTaGAATTGGTATGTTTATACAGGTCTGAATAGAGAT +
Preference number: 6 (lower is better)
Translates to: TDETQGRCDEFL*NWYVYTGLNRD
Trigger: ATCTCTATTCAGACCTGTATAAACATACCAATTCCAAAGAAACTCGTCGCATCTTCCTTGAGTTTCATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000528225.5
ENST00000529970.5
ENST00000532993.5
CDS CAA 90 bp TTATACCCTAATCTCTTAATTCCTCAAATTCTTCTTTTGTATACCTaGGAACTCACGGTTAGCATCTGTGAAATCCTCCATCTCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LYPNLLIPQILLLYT*ELTVSICEILHLFN
Trigger: GTTAAAGAGATGGAGGATTTCACAGATGCTAACCGTGAGTTCCAAGGTATACAAAAGAAGAATTTGAGGAATTAAGAGATTAGGGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 90 bp CACAACTTTTTATACCCTAATCTCTTAATTCCTCAAATTCTTCTTTaGTATACCTTGGAACTCACGGTTAGCATCTGTGAAATCCTCCAT +
Preference number: 6 (lower is better)
Translates to: HNFLYPNLLIPQILL*YTLELTVSICEILH
Trigger: ATGGAGGATTTCACAGATGCTAACCGTGAGTTCCAAGGTATACAAAAGAAGAATTTGAGGAATTAAGAGATTAGGGTATAAAAAGTTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS TCA 72 bp ACTACATCTGGCCTAAAATTTAATTTTCTTACACCCTaGAGCCTTTACAACAACTACTGTCTTACTACTCTG +
Preference number: 6 (lower is better)
Translates to: TTSGLKFNFLTP*SLYNNYCLTTL
Trigger: CAGAGTAGTAAGACAGTAGTTGTTGTAAAGGCTTCAGGGTGTAAGAAAATTAAATTTTAGGCCAGATGTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531616.1
CDS CCA 72 bp AGTTCAGAAATAACGCTGAATGGAAACAAGGCATATTaGGAATTCAGTAAAATCATCCTAACAACTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSEITLNGNKAY*EFSKIILTTPF
Trigger: GAAAGGAGTTGTTAGGATGATTTTACTGAATTCCCAATATGCCTTGTTTCCATTCAGCGTTATTTCTGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 72 bp AATATTATCCAACAGAAGTGGGTACTTAGTAAGCCTTaGCATTTGAGTGGGAATAATATCCTTCAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: NIIQQKWVLSKP*HLSGNNILQLK
Trigger: CTTCAACTGAAGGATATTATTCCCACTCAAATGCAAAGGCTTACTAAGTACCCACTTCTGTTGGATAATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356641.7
ENST00000397843.7
ENST00000529970.5
ENST00000530747.5
ENST00000531616.1
ENST00000532993.5
CDS CAA 72 bp AATCTCTTAATTCCTCAAATTCTTCTTTTGTATACCTaGGAACTCACGGTTAGCATCTGTGAAATCCTCCAT +
Preference number: 6 (lower is better)
Translates to: NLLIPQILLLYT*ELTVSICEILH
Trigger: ATGGAGGATTTCACAGATGCTAACCGTGAGTTCCAAGGTATACAAAAGAAGAATTTGAGGAATTAAGAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 72 bp TCTTTATATATACATTCGACATCCTTGGAAAGGCATTaGTCAGATGATTTTACTGACCACAAGAGGGATGAT +
Preference number: 6 (lower is better)
Translates to: SLYIHSTSLERH*SDDFTDHKRDD
Trigger: ATCATCCCTCTTGTGGTCAGTAAAATCATCTGACAAATGCCTTTCCAAGGATGTCGAATGTATATATAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532993.5
CDS CAA 72 bp CTCTACAATGATACTTCTGTAGTGGAATGTACAGTGTaGGAAGTTAAAAATGCTTGCATTCCTACTAAATGC +
Preference number: 6 (lower is better)
Translates to: LYNDTSVVECTV*EVKNACIPTKC
Trigger: GCATTTAGTAGGAATGCAAGCATTTTTAACTTCCAACACTGTACATTCCACTACAGAAGTATCATTGTAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530388.1
CDS TCA 72 bp TCATTTAGAAAGGATGAAATATCTCTGAAGTCATTCTaGTTCCAAGAAATTTTCCTACATACTGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SFRKDEISLKSF*FQEIFLHTGSE
Trigger: CTCAGAGCCAGTATGTAGGAAAATTTCTTGGAATCAGAATGACTTCAGAGATATTTCATCCTTTCTAAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530747.5
CDS GCA 72 bp ATTTATCACATACATGCTAGGGTAAATAAAGAACACTaGACTTCGATACAGAAAGACCAGGAACTGAATTTT +
Preference number: 6 (lower is better)
Translates to: IYHIHARVNKEH*TSIQKDQELNF
Trigger: AAAATTCAGTTCCTGGTCTTTCTGTATCGAAGTGCAGTGTTCTTTATTTACCCTAGCATGTATGTGATAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530747.5
CDS CAA 72 bp TTATACCCTAATCTCTTAATTCCTCAAATTCTTCTTTaGTATACCTTGGAACTCACGGTTAGCATCTGTGAA +
Preference number: 6 (lower is better)
Translates to: LYPNLLIPQILL*YTLELTVSICE
Trigger: TTCACAGATGCTAACCGTGAGTTCCAAGGTATACAAAAGAAGAATTTGAGGAATTAAGAGATTAGGGTATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525222.1
CDS CAA 72 bp ACAATTGAATTTTTAGATGACTACGCAAGTGTCGAGTaGTTAGAGCCTTGGTTTTATGACATATTACTGCTT +
Preference number: 6 (lower is better)
Translates to: TIEFLDDYASVE*LEPWFYDILLL
Trigger: AAGCAGTAATATGTCATAAAACCAAGGCTCTAACAACTCGACACTTGCGTAGTCATCTAAAAATTCAATTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530388.1