RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF11 (Homo sapiens)

Ensembl gene IDs: ENSG00000132694

Ensembl transcript IDs: ENST00000361409.2, ENST00000368194.8, ENST00000461678.1, ENST00000483682.1, ENST00000486670.1, ENST00000487682.5, ENST00000492592.1

Found 734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGAGAGTTGGGTGAGGACGTGGTGATGGGGCCAATGCTGCGGTaGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCA +
Preference number: 1 (lower is better)
Translates to: QGELGEDVVMGPMLR*PLGWSWVNSGTRHS
Trigger: TGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCATCACCACGTCCTCACCCAACTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR TCA 90 bp GGCGTGCGCGTGTACACACATATGTGGGGTGAGGGCAGACCATGGTaGGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATG +
Preference number: 1 (lower is better)
Translates to: GVRVYTHMWGEGRPW*VGAFRMQSACLGDM
Trigger: CATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACTCACCATGGTCTGCCCTCACCCCACATATGTGTGTACACGCGCACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR GCA 90 bp CTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTaGGCGTGTACACACATATGTGGGGTGAGGGCAGACCATGGTGAG +
Preference number: 1 (lower is better)
Translates to: LLLSLACLRAAHIQA*ACTHICGVRADHGE
Trigger: CTCACCATGGTCTGCCCTCACCCCACATATGTGTGTACACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR TCA 90 bp ACACCTAGCACAGTGTGTATATTCTATTCATCAGGGAGAGTTGGGTaGGGACGTGGTGATGGGGCCAATGCTGCGGTGGCCCCTTGGATG +
Preference number: 1 (lower is better)
Translates to: TPSTVCIFYSSGRVG*GRGDGANAAVAPWM
Trigger: CATCCAAGGGGCCACCGCAGCATTGGCCCCATCACCACGTCCTCACCCAACTCTCCCTGATGAATAGAATATACACACTGTGCTAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR TCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGAGGGCAGACCATGGTaGGTGGGGGCCTTTCGGATG +
Preference number: 2 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVEGRPW*VGAFRM
Trigger: CATCCGAAAGGCCCCCACTCACCATGGTCTGCCCTC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCCCCCCGGGCCTTGGCTaGATCCTAGTTTCCCTAACT +
Preference number: 2 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRPPGLG*ILVSLT
Trigger: AGTTAGGGAAACTAGGATCCAGCCAAGGCCCGGGGG...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTTTTCACTTGCATGTCTaGGGGCAGCGCACATACAGG +
Preference number: 2 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTFHLHV*GQRTYR
Trigger: CCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAA...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCCCCCGGGCCTTGGCTaGATCCTAGTTTCCCTAACT +
Preference number: 2 (lower is better)
Translates to: MQSACLGDMRPWRVGLREPPGLG*ILVSLT
Trigger: AGTTAGGGAAACTAGGATCCAGCCAAGGCCCGGGGG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTGGAGACATGAGGCCTTaGAGGGTTGGGCTAAGGGAG +
Preference number: 2 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTGDMRP*RVGLRE
Trigger: CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCC...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTACACACATATGTaGGGTGAGGGCAGACCATGG +
Preference number: 2 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRVYTHM*GEGRPW
Trigger: CCATGGTCTGCCCTCACCCCACATATGTGTGTACAC...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTAAAGACACTGAAACCTaGCTCCGACTTGAGCAGACC +
Preference number: 2 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPKDTET*LRLEQT
Trigger: GGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR GCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTCGGATGCAGTCAGCATaGTTAGGAGACATGAGGCCT +
Preference number: 2 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTRMQSA*LGDMRP
Trigger: AGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCG...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR CAA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTaGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: TLRPGSRFRLDPGTG*LTKEIQVKPLFPKQ
Trigger: CTGCTTAGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCACACATATGTGGGGTaGGGGCAGACCATGGTGAGT +
Preference number: 2 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVHTYVG*GQTMVS
Trigger: ACTCACCATGGTCTGCCCTCACCCCACATATGTGTG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCAACCTGACTCCGACTTaGGCAGACCAAGCAACATGC +
Preference number: 2 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVNLTPT*ADQATC
Trigger: GCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR TCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGAACCTGACTCCGACTTaGGCAGACCAAGCAACATGC +
Preference number: 2 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMNLTPT*ADQATC
Trigger: GCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTT...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR TCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTCACACATATGTGGGGTaGGGGCAGACCATGGTGAGT +
Preference number: 2 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPHTYVG*GQTMVS
Trigger: ACTCACCATGGTCTGCCCTCACCCCACATATGTGTG...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCGGATGCAGTCAGCATaGTTAGGAGACATGAGGCCT +
Preference number: 2 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMRMQSA*LGDMRP
Trigger: AGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR CCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCGCACCCACCTCTGCCTaGGGTCTTATGGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFAPTSA*GLMEKE
Trigger: CTCTTTCTCCATAAGACCCCAGGCAGAGGTGGGTGC...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCAAAGACACTGAAACCTaGCTCCGACTTGAGCAGACC +
Preference number: 2 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVKDTET*LRLEQT
Trigger: GGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR TCA 72 bp GGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTaGATTCAGGGACTCGGCATTCAGACCCCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: GQCCGGPLDGPG*IQGLGIQTPVP
Trigger: GGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR GCA 72 bp TCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTaGGCGTGTACACACATATGTGGGGTGAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: SLACLRAAHIQA*ACTHICGVRAD
Trigger: GTCTGCCCTCACCCCACATATGTGTGTACACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR TCA 72 bp ATTCTATTCATCAGGGAGAGTTGGGTGAGGACGTGGTaGTGGGGCCAATGCTGCGGTGGCCCCTTGGATGGT +
Preference number: 3 (lower is better)
Translates to: ILFIRESWVRTW*WGQCCGGPLDG
Trigger: ACCATCCAAGGGGCCACCGCAGCATTGGCCCCATCACCACGTCCTCACCCAACTCTCCCTGATGAATAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
3UTR-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAAACCTGACTCCGACTaGAGCAGACCAAGCAACATG +
Preference number: 3 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRKPDSD*SRPSNM
Trigger: CATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR TCA 72 bp ATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTaGGGGCAGCGCACATACAGGCGTGCGCGTGTACAC +
Preference number: 3 (lower is better)
Translates to: IYTEASSFHLHV*GQRTYRRARVH
Trigger: GTGTACACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCAAACCTGACTCCGACTaGAGCAGACCAAGCAACATG +
Preference number: 3 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVKPDSD*SRPSNM
Trigger: CATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCTGCTGCCAGGGGGTTaGTGGCCCTCTCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLLPGG*WPSPGR
Trigger: CCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCAGCTCCGGGGTGCCTaGTGGCATTCCGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQQLRGA*WHSARP
Trigger: AGGCCGTGCGGAATGCCACCAGGCACCCCGGAGCTG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCCGGGGACCTGGGGGTaGAGGATGGACGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQPGTWG*RMDGHW
Trigger: CCAATGCCCGTCCATCCTCCACCCCCAGGTCCCCGG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCCTTGGACCCTCTGCTaGGACCCAGTGCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQPWTLC*DPVPPG
Trigger: GCCTGGAGGCACTGGGTCCCAGCAGAGGGTCCAAGG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGAGCCCAGGAGGGTaGGTGCGACATAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQKSPGG*VRHRRQ
Trigger: CTGGCGCCTATGTCGCACTCACCCTCCTGGGCTCTT...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGACGAGGCTGACTGGTaGAGGCGAGTAGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQDEADW*RRVASA
Trigger: TGCGGAGGCTACTCGCCTGCACCAGTCAGCCTCGTC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGGGGCAGCTCCGGGGTaGCTGGTGGCATTCCGCACG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFGAAPG*LVAFRT
Trigger: CGTGCGGAATGCCACCAGGCACCCCGGAGCTGCCCC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTTCCCCCTCCAGCCCTaGAAGCTGGGTGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQFPLQP*KLGVVP
Trigger: GGGGACAACACCCAGCTTGCAGGGCTGGAGGGGGAA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGAGCCCTGCCGCCTGTaGTGCTGGGCCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAEPCRL*CWATLA
Trigger: GGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGGATGGACGGGCATTaGGGCAGCTCCGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRRMDGH*GSSGVP
Trigger: AGGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGGTGTGGGGCCCTGCTaGGCTGGCTCCCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAGVGPC*AGSRGP
Trigger: AGGTCCCCGGGAGCCAGCCCAGCAGGGCCCCACACC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAACCCTGGTCACCGGTTaGGGGGACTGCTGCATCCGA +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRTLVTG*GDCCIR
Trigger: TCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGGT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGACAGCGAGCCCTTCCATaGACAGAGGGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRQRALP*TEGLGR
Trigger: CCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTG...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGCCCTGCCGCCTGTGGTaGTGGGCCACCCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVPCRLW*WATLAM
Trigger: CATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGG...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATCTGCTGGGACCCAGTaGCTCCAGGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSAGTQ*LQAAPQ
Trigger: CTGAGGAGCTGCCTGGAGGCACTGGGTCCCAGCAGA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGACCCATGTCTTCCTaGTCTGGCCGTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQRPMSS*SGRSPS
Trigger: GGAGGGGGAACGGCCAGAGCAGGAAGACATGGGTCT...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGAAGGCTGGCGATGGTaGGAAGGGGACTTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQEGWRW*EGDLRS
Trigger: AGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCGGTCAATCTCCCGCTaGGTTAGCCCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQRSISR*VSPATT
Trigger: TGTGGTGGCTGGGCTAACCCAGCGGGAGATTGACCG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGTGCAGGGACAACCTTaGTGCCTGCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQVQGQP*CLPPQL
Trigger: AAGCTGAGGTGGCAGGCAGCAAGGTTGTCCCTGCAC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTCCGGGGACCTGGGGGTaGAGGATGGACGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGPGTWG*RMDGHW
Trigger: CCAATGCCCGTCCATCCTCCACCCCCAGGTCCCCGG...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGCAGCCGCCGACACTaGGGGTGGCTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRCSRRH*GWLSAS
Trigger: GGAGGCTGAGAGCCACCCTCAGTGTCGGCGGCTGCA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCAGCGAGCCCTTCCATaGACAGAGGGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFQRALP*TEGLGR
Trigger: CCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCACACATATGTGGGGTaGGGGCAGACCATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQHTYVG*GQTMVS
Trigger: ACTCACCATGGTCTGCCCTCACCCCACATATGTGTG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTGCTGGGGATGGGTCCTaGTGGAGCCCAGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGAGDGS*WSPEMP
Trigger: GGGCATCTCTGGGCTCCAGCAGGACCCATCCCCAGC...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATGCCCAGCCCCAGTGTaGGCTTCGTTCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRCPAPV*ASFCSR
Trigger: ACGACTACAGAACGAAGCGCACACTGGGGCTGGGCA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGAGGCACCCACCTCTaGCTGGGGTCTTATGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRGGTHL*LGSYGE
Trigger: TTCTCCATAAGACCCCAGGCAGAGGTGGGTGCCTCC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTCGGGGAGCTCCTGCTaGGGATGGGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACASGSSC*GWVLLE
Trigger: CTCCAGCAGGACCCATCCCCAGCAGGAGCTCCCCGA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGGAGCCCTGCCGCCTGTaGTGCTGGGCCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREEPCRL*CWATLA
Trigger: GGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTC...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAGAATCTCCCGGCACTaGTCCCGGGCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRRISRH*SRARHS
Trigger: GCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCCCTCTCCAGGGCGGTaGCATCCAGGCGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFPSPGR*HPGVSG
Trigger: ACCAGAAACGCCTGGATGCCACCGCCCTGGAGAGGG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCTGCCAGGGGGTTGCTaGCCCTCTCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALELPGGC*PSPGRW
Trigger: CCACCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAGGATGGACGGGCATTaGGGCAGCTCCGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVRMDGH*GSSGVP
Trigger: AGGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCCTTGGACCCTCTGCTaGGACCCAGTGCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTPWTLC*DPVPPG
Trigger: GCCTGGAGGCACTGGGTCCCAGCAGAGGGTCCAAGG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAACTGCCCACAGGCGTaGTGCCACCAGATGACTCTC +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRNCPQA*CHQMTL
Trigger: GAGAGTCATCTGGTGGCACCACGCCTGTGGGCAGTT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAAGAGCCCAGGAGGGTaGGTGCGACATAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVKSPGG*VRHRRQ
Trigger: CTGGCGCCTATGTCGCACTCACCCTCCTGGGCTCTT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTGGGCCACCCTGGCCATaGTCACAGGGGAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPGPPWP*SQGRFE
Trigger: CTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCC...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGAAAAACCCCCAGGTaGGCTGGCCGAGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRRKTPR*AGRDFS
Trigger: ACTGAAGTCTCGGCCAGCTCACCTGGGGGTTTTTCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTGGTAGAGGACGAGGCTaGCTGGTGCAGGCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTGRGRG*LVQASS
Trigger: GCTACTCGCCTGCACCAGTCAGCCTCGTCCTCTACC...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGCCCATTTTGGGAGTaGATGGAGGGGTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRGPFWE*MEGLGS
Trigger: AGAACCCAACCCCTCCATTCACTCCCAAAATGGGCC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTCTCAGCCTCCTGCATaGAGAGCTGGAATCGACTCT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQSQPPA*RAGIDS
Trigger: AGAGTCGATTCCAGCTCTTCATGCAGGAGGCTGAGA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGCCTGGGTCCCAGGGGTaGGAGGTGACGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAPGSQG*EVTLMT
Trigger: TGTCATCAGCGTCACCTCTCACCCCTGGGACCCAGG...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCCTGGGTCCCAGGGGTaGGAGGTGACGCTGATGACA +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTPGSQG*EVTLMT
Trigger: TGTCATCAGCGTCACCTCTCACCCCTGGGACCCAGG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCCTGCCGCCTGTGGTaGTGGGCCACCCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPCRLW*WATLAM
Trigger: CATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGACCATGTCAACATCACTaGGAGAGCGGGGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRPCQHH*ESGARS
Trigger: AGAACGTGCCCCGCTCTCGCAGTGATGTTGACATGG...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTGACGAGGCTGACTGGTaGAGGCGAGTAGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTDEADW*RRVASA
Trigger: TGCGGAGGCTACTCGCCTGCACCAGTCAGCCTCGTC...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGAAGGAGGGTATCTGTaGAGAACCCCAAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRREGGYL*RTPNWG
Trigger: CCCCCAGTTTGGGGTTCTGCACAGATACCCTCCTTC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGTCTTGGATCATCGTTaGCTCCCTGCAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRVLDHR*LPAAEA
Trigger: AGCCTCAGCTGCAGGGAGGCAACGATGATCCAAGAC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCTCTCGGCCTCTCCTTaGCTCCCTTTCCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLSASP*LPFRPS
Trigger: CGAGGGGCGGAAAGGGAGGCAAGGAGAGGCCGAGAG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCCACTGTCCCCCTCCTaGGAATCCAGAGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTPLSPS*ESRESR
Trigger: CCGGCTCTCTCTGGATTCCCAGGAGGGGGACAGTGG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGACTGCCAGGGGGTTGCTaGCCCTCTCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRLPGGC*PSPGRW
Trigger: CCACCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAG...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCTCCGGGGTGCCTGGTaGCATTCCGCACGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLRGAW*HSARPL
Trigger: AAGAGGCCGTGCGGAATGCCACCAGGCACCCCGGAG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTGGCTCCCGGGGACCTaGGGGTGGAGGATGGACGGG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREWLPGT*GWRMDG
Trigger: CCCGTCCATCCTCCACCCCCAGGTCCCCGGGAGCCA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGATGGCTCCCGGGGACCTaGGGGTGGAGGATGGACGGG +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRWLPGT*GWRMDG
Trigger: CCCGTCCATCCTCCACCCCCAGGTCCCCGGGAGCCA...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCAGGACCCTGGTAACTaGTGCTCCACTCTACTTCTA +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQQDPGN*CSTLLL
Trigger: TAGAAGTAGAGTGGAGCATCAGTTACCAGGGTCCTG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAGGGGATCACTGACGTaGTTCGGGGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACARGSLT*FGELLL
Trigger: CAGCAGGAGCTCCCCGAATCACGTCAGTGATCCCCT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTAGAGAGCCGGCCTTCTaGTGGTCTCTGGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTREPAF*WSLAGV
Trigger: GACACCAGCCAGAGACCATCAGAAGGCCGGCTCTCT...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTGCAGCCGCCGACACTaGGGGTGGCTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKCSRRH*GWLSAS
Trigger: GGAGGCTGAGAGCCACCCTCAGTGTCGGCGGCTGCA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCCGGTTATGGTCCTGGTaGCGCGGCTGCGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRRLWSW*RGCVCC
Trigger: ACAGCAGACGCAGCCGCGTCACCAGGACCATAACCG...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCCACCTACCCCAGCCTaGTTCTCAGACCCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTPPTPA*FSDPAY
Trigger: GTAGGCTGGGTCTGAGAATCAGGCTGGGGTAGGTGG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATTGGATGGTCCTGGGTaGATTCAGGGACTCGGCATT +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRLDGPG*IQGLGI
Trigger: AATGCCGAGTCCCTGAATTCACCCAGGACCATCCAA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGATTCGGGGAGCTCCTaGTGGGGATGGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGDSGSS*WGWVLL
Trigger: CAGCAGGACCCATCCCCAGCAGGAGCTCCCCGAATC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATCATTGATGACCTCTTaGCGGTCAATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSLMTS*RSISRW
Trigger: CCAGCGGGAGATTGACCGGCAAGAGGTCATCAATGA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTACTTGGTGAGCCGCTaGATCTCAGAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQYLVSR*ISEMMR
Trigger: CCTCATCATCTCTGAGATGCAGCGGCTCACCAAGTA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCATCCAGTTCTACCCTaGTGGGTGTGGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTHPVLP*WVWGPA
Trigger: AGCAGGGCCCCACACCCAGCAGGGTAGAACTGGATG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCTAGCAGGACCTGGTaGTTCCCTTGGACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSSRTW*FPWTLC
Trigger: GCAGAGGGTCCAAGGGAAGCACCAGGTCCTGCTAGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTTCCCCCTCCAGCCCTaGAAGCTGGGTGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRFPLQP*KLGVVP
Trigger: GGGGACAACACCCAGCTTGCAGGGCTGGAGGGGGAA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGCCCACAGGCGTGGTaGCACCAGATGACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGCPQAW*HQMTLP
Trigger: GGGGAGAGTCATCTGGTGGCACCACGCCTGTGGGCA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTGAAGGCTGGCGATGGTaGGAAGGGGACTTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTEGWRW*EGDLRS
Trigger: AGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTC...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGAGGCATCCGAAGGCTaGCGATGGTGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGEASEG*RWWEGD
Trigger: GTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTTGTGTCCCAGGTTCTaGGGCATCATACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLCPRF*GIILLV
Trigger: AACCAGCAGTATGATGCCCCAGAACCTGGGACACAA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCGGTCAATCTCCCGCTaGGTTAGCCCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTRSISR*VSPATT
Trigger: TGTGGTGGCTGGGCTAACCCAGCGGGAGATTGACCG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGAAGAATCTCCCGGCACTaGTCCCGGGCCCGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRRISRH*SRARHS
Trigger: GCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCT...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCCTGGGGGTGGAGGATaGACGGGCATTGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEPGGGG*TGIGAA
Trigger: AGCTGCCCCAATGCCCGTCCATCCTCCACCCCCAGG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGGTGTGGGGCCCTGCTaGGCTGGCTCCCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRGVGPC*AGSRGP
Trigger: AGGTCCCCGGGAGCCAGCCCAGCAGGGCCCCACACC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCCTCTAGCAGGACCTaGTGCTTCCCTTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSSSRT*CFPWTL
Trigger: GAGGGTCCAAGGGAAGCACCAGGTCCTGCTAGAGGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCATGTCTTCCTGCTCTaGCCGTTCCCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRHVFLL*PFPLQP
Trigger: GGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGCGGCTGGGGCGTCTTaGATCATCGTTGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRAAGAS*IIVASL
Trigger: CAGGGAGGCAACGATGATCCAAGACGCCCCAGCCGC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCCCCCGGGCCTTGGCTaGATCCTAGTTTCCCTAACT +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFPPGLG*ILVSLT
Trigger: AGTTAGGGAAACTAGGATCCAGCCAAGGCCCGGGGG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAGGGGATCACTGACGTaGTTCGGGGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRRGSLT*FGELLL
Trigger: CAGCAGGAGCTCCCCGAATCACGTCAGTGATCCCCT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTCATCAATGACTCACTaGGGGAAGGAAAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQSSMTH*GKESVL
Trigger: CAGAACGCTTTCCTTCCCTCAGTGAGTCATTGATGA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGGCCACCCTGGCCATaGTCACAGGGGAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKGPPWP*SQGRFE
Trigger: CTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGACCCTGGTCACCGGTTaGGGGGACTGCTGCATCCGA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALETLVTG*GDCCIR
Trigger: TCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGGT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGGCTCATGTAGGTATTaGGGGCGAAGTCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAGSCRY*GRSPWG
Trigger: CCCCCATGGACTTCGCCCTCAATACCTACATGAGCC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCTTCATTCACATACTTaGGAATCTCCCGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLHSHT*ESPGTG
Trigger: ACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCTCCTTAGCGGGAGGTaGGAGGGAGCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLLSGR*EGAICP
Trigger: TGGACAGATGGCTCCCTCTCACCTCCCGCTAAGGAG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTCAGCTGTAACTGAGTaGCTCGCCGCCGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSAVTE*LAAGHL
Trigger: AAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGGTGGGAAGGGGACTTaGGCTCTGGTGCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVGGKGT*ALVQNL
Trigger: GAGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTGCCCAGGAGGGTGAGTaGGACATAGGCGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTAQEGE*DIGARF
Trigger: AAATCTGGCGCCTATGTCGCACTCACCCTCCTGGGC...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGAATCCTTGGGGCTTaGCTGCTGATAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRGILGA*LLINFC
Trigger: GCAGAAGTTTATCAGCAGGCAAGCCCCAAGGATTCC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCAGGCTCTTGAACTCTaGTGCCAGGGGGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGQALEL*CQGVAG
Trigger: GCCAGCAACCCCCTGGCAGCAGAGTTCAAGAGCCTG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGCCCACAGCAGTCTTaGTGTGGCACTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSPQQS*CGTSAI
Trigger: TATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCATCCAGTTCTACCCTaGTGGGTGTGGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRHPVLP*WVWGPA
Trigger: AGCAGGGCCCCACACCCAGCAGGGTAGAACTGGATG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAGACCCATGTCTTCCTaGTCTGGCCGTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRRPMSS*SGRSPS
Trigger: GGAGGGGGAACGGCCAGAGCAGGAAGACATGGGTCT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTGGAGGCACCCACCTCTaGCTGGGGTCTTATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGGGTHL*LGSYGE
Trigger: TTCTCCATAAGACCCCAGGCAGAGGTGGGTGCCTCC...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTGCCGCCTGTGGTGCTaGGCCACCCTGGCCATGATC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRECRLWC*ATLAMI
Trigger: GATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTGCCGCCTGTGGTGCTaGGCCACCCTGGCCATGATC +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKCRLWC*ATLAMI
Trigger: GATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCGTGGATCTGCTCTTaGATCTCAGGCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSWICS*ISGMAA
Trigger: GGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTGCTTCTCAGCCACTTaGCGCTCTCGGAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRCFSAT*RSRRGS
Trigger: GGACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATTGTCAGGAGCAGACTaGGCCTTTTCAGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRLSGAD*AFSAVL
Trigger: CAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCATTTTGGGAGTGAATaGAGGGGTTGGGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQHFGSE*RGWVLK
Trigger: CTTGAGAACCCAACCCCTCCATTCACTCCCAAAATG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTGTGCAGCCACTTGCTaGAGTTCCTCTCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRCAATC*SSSRAG
Trigger: CCCTGCCCGAGAGGAACTCCAGCAAGTGGCTGCACA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGACCTGGTGCTTCCCTTaGACCCTCTGCTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRTWCFP*TLCWDP
Trigger: TGGGTCCCAGCAGAGGGTCCAAGGGAAGCACCAGGT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTACCTGGTGCTTCCCTTaGACCCTCTGCTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPTWCFP*TLCWDP
Trigger: TGGGTCCCAGCAGAGGGTCCAAGGGAAGCACCAGGT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTCCAGCCCTGCAAGCTaGGTGTTGTCCCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSSPAS*VLSPSP
Trigger: GGGTGAAGGGGACAACACCCAGCTTGCAGGGCTGGA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCATGGGTGCCTCTGAGTaGTCGGTGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRMGASE*SVLESG
Trigger: CCCGGACTCAAGCACCGACCACTCAGAGGCACCCAT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCGGCTGGGGCGTCTTaGATCATCGTTGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEAAGAS*IIVASL
Trigger: CAGGGAGGCAACGATGATCCAAGACGCCCCAGCCGC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGGAGACATGAGGCCTTaGAGGGTTGGGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVGDMRP*RVGLRE
Trigger: CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGTAGCTTTGGTGTCTTaGTCAGGATTGAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQVALVS*SGLNRL
Trigger: CAAGCGATTCAATCCTGATCAAGACACCAAAGCTAC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTAAAGGCTTTGGGCTTTaGTCTACACCCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFKGFGL*STPWSP
Trigger: CGGTGACCAGGGTGTAGATCAAAGCCCAAAGCCTTT...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGGGTAGAGGACGAGGCTaGCTGGTGCAGGCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREGRGRG*LVQASS
Trigger: GCTACTCGCCTGCACCAGTCAGCCTCGTCCTCTACC...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTCACACCAGGAATTGTaGATCTCTATGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQSHQEL*ISMSSG
Trigger: GCCTGAACTCATAGAGATTCACAATTCCTGGTGTGA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGGTCTGCTTGCTGTCTaGGGAGCCCACAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGGLLAV*GAHSSL
Trigger: AAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTTGGGGTTCCTTGTCCTaGTGCCCCTGTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTWGSLS*CPCSLH
Trigger: ATGGAGAGAACAGGGGCATCAGGACAAGGAACCCCA...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCGGTTATGGTCCTGGTaGCGCGGCTGCGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKRLWSW*RGCVCC
Trigger: ACAGCAGACGCAGCCGCGTCACCAGGACCATAACCG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGAGGGCAGACCATGGTaGGTGGGGGCCTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKEGRPW*VGAFRM
Trigger: CATCCGAAAGGCCCCCACTCACCATGGTCTGCCCTC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTGGAAGTATGTCCACTaGGCCACCAGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVWKYVH*ATSLLL
Trigger: CAGCAGGAGACTGGTGGCTCAGTGGACATACTTCCA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTCAGGGAGAGTTGGGTaGGGACGTGGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRESGRVG*GRGDGA
Trigger: GGCCCCATCACCACGTCCTCACCCAACTCTCCCTGA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGGACTTGCGCTCTGGTaGAGAATCTCCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFGLALW*RISQRR
Trigger: TCTTCTCTGGGAGATTCTGCACCAGAGCGCAAGTCC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCCCAGGCCGCACAGACTaGACCAGAACAATGCGATCC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRPGRTD*TRTMRS
Trigger: GGATCGCATTGTTCTGGTGCAGTCTGTGCGGCCTGG...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGACCGGCCTTCATGGCTaGACCTCCAGGCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKTGLHG*TSRPHR
Trigger: TCTGTGCGGCCTGGAGGTGCAGCCATGAAGGCCGGT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGCCCAGCCCCAGTGTaGGCTTCGTTCTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRCPAPV*ASFCSR
Trigger: ACGACTACAGAACGAAGCGCACACTGGGGCTGGGCA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTGTGTTGGAAGGTCGTaGCTCTCGAAGACGGATCCC +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVCVGRS*LSKTDP
Trigger: GGGATCCGTCTTCGAGAGGCACGACCTTCCAACACA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATCTGGGGCATCATACTaGTGGTTGTTCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSGASY*WLFSKC
Trigger: GCACTTTGAGAACAACCAGCAGTATGATGCCCCAGA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGACGGGGCTGAAGGTCTaGTTGCTGTCTGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALETGLKV*LLSEEP
Trigger: GGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTCTGCTGGGACCCAGTaGCTCCAGGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKSAGTQ*LQAAPQ
Trigger: CTGAGGAGCTGCCTGGAGGCACTGGGTCCCAGCAGA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTCTGCACTGCCCTCCTaGTCAGGGTCCTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESALPS*SGSSSR
Trigger: CCTGCTAGAGGACCCTGAGCAGGAGGGCAGTGCAGA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTGTGCAGGGACAACCTTaGTGCCTGCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPVQGQP*CLPPQL
Trigger: AAGCTGAGGTGGCAGGCAGCAAGGTTGTCCCTGCAC...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCTCTGAGTGGTCGGTaGTTGAGTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPLSGR*LSPGVL
Trigger: CAGGACCCCCGGACTCAAGCACCGACCACTCAGAGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTCCTCTGAGTGGTCGGTaGTTGAGTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTPLSGR*LSPGVL
Trigger: CAGGACCCCCGGACTCAAGCACCGACCACTCAGAGG...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTCACACCGGCCTTCATaGCTGCACCTCCAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKSHRPS*LHLQAA
Trigger: TGCGGCCTGGAGGTGCAGCCATGAAGGCCGGTGTGA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCACTGTCCCCCTCCTaGGAATCCAGAGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPLSPS*ESRESR
Trigger: CCGGCTCTCTCTGGATTCCCAGGAGGGGGACAGTGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAACCCCCAGGTGAGCTaGCCGAGACTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVNPQVS*PRLQFL
Trigger: GAGAAACTGAAGTCTCGGCCAGCTCACCTGGGGGTT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGCAGAACCCCAAACTaGGGGACTCAATGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACACRTPN*GTQCSC
Trigger: GCAGGAGCATTGAGTCCCCCAGTTTGGGGTTCTGCA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTGTGCAGCCACTTGCTaGAGTTCCTCTCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALECAATC*SSSRAG
Trigger: CCCTGCCCGAGAGGAACTCCAGCAAGTGGCTGCACA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCTCATAGATCTGGGGTaGGCCCAGCTTGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRLIDLG*AQLGGA
Trigger: TGCACCTCCAAGCTGGGCCCACCCCAGATCTATGAG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCCTCATAGATCTGGGGTaGGCCCAGCTTGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRLIDLG*AQLGGA
Trigger: TGCACCTCCAAGCTGGGCCCACCCCAGATCTATGAG...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCATGAACAGAGGGCCTaGGAAGGCCAAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRHEQRA*EGQVDG
Trigger: CCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTCATGAACAGAGGGCCTaGGAAGGCCAAGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPHEQRA*EGQVDG
Trigger: CCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATG...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCAGCCTGAGTTTCCATaGTGTGACCTGGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRQPEFP*CDLAAG
Trigger: GCCTGCTGCCAGGTCACACCATGGAAACTCAGGCTG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGGGCCCAGTCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGCAGCCTGAGTTTCCATaGTGTGACCTGGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WGPVLSSVPASLVFYRDRQPEFP*CDLAAG
Trigger: GCCTGCTGCCAGGTCACACCATGGAAACTCAGGCTG...CCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGACTGGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCATGTCTTCCTGCTCTaGCCGTTCCCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREHVFLL*PFPLQP
Trigger: GGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTTGGAGGAGAGCGGCTaGGGCGTCTTGGATCATCGT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRLEESG*GVLDHR
Trigger: ACGATGATCCAAGACGCCCCAGCCGCTCTCCTCCAA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTTGGAGGAGAGCGGCTaGGGCGTCTTGGATCATCGT +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRLEESG*GVLDHR
Trigger: ACGATGATCCAAGACGCCCCAGCCGCTCTCCTCCAA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGTTCATGGCTGTTCCTaGAGTCAGAAGCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFVHGCS*SQKLGA
Trigger: AGCCCCTAGCTTCTGACTCCAGGAACAGCCATGAAC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCTGCGGTGGCCCCTTaGATGGTCCTGGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEAAVAP*MVLGEF
Trigger: GAATTCACCCAGGACCATCCAAGGGGCCACCGCAGC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAAAGGCTTTGGGCTTTaGTCTACACCCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAKGFGL*STPWSP
Trigger: CGGTGACCAGGGTGTAGATCAAAGCCCAAAGCCTTT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTAGAAAAACCCCCAGGTaGGCTGGCCGAGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPRKTPR*AGRDFS
Trigger: ACTGAAGTCTCGGCCAGCTCACCTGGGGGTTTTTCT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGGCATGGCTGCCTCTTaGGCTTCACAGAGAACACCA +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGGMAAS*ASQRTP
Trigger: TGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGCCCATTTTGGGAGTaGATGGAGGGGTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRGPFWE*MEGLGS
Trigger: AGAACCCAACCCCTCCATTCACTCCCAAAATGGGCC...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGGTTCCTTGTCCTaGTGCCCCTGTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGWGSLS*CPCSLH
Trigger: ATGGAGAGAACAGGGGCATCAGGACAAGGAACCCCA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGCTGGAGCCCAGAGATaGCCATGGATGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRAGAQR*PWMKVK
Trigger: CTTCACCTTCATCCATGGGCATCTCTGGGCTCCAGC...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TGGGGCCCAGTCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGCTGGAGCCCAGAGATaGCCATGGATGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WGPVLSSVPASLVFYRDRAGAQR*PWMKVK
Trigger: CTTCACCTTCATCCATGGGCATCTCTGGGCTCCAGC...CCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGACTGGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGCTGGGGATGGGTCCTaGTGGAGCCCAGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRAGDGS*WSPEMP
Trigger: GGGCATCTCTGGGCTCCAGCAGGACCCATCCCCAGC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGTGTTGGAAGGTCGTaGCTCTCGAAGACGGATCCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRCVGRS*LSKTDP
Trigger: GGGATCCGTCTTCGAGAGGCACGACCTTCCAACACA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGCGGGGCACGTTCTCTaGCTTTCGAGACCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRAGHVL*LSRPFH
Trigger: ATGAAACGGTCTCGAAAGGCAGAGAACGTGCCCCGC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTAACTGTGCAGCCACTTaGTGGAGTTCCTCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGNCAAT*WSSSRA
Trigger: TGCCCGAGAGGAACTCCAGCAAGTGGCTGCACAGTT...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCTGCTGCCAGGGGGTTaGTGGCCCTCTCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVLLPGG*WPSPGR
Trigger: CCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGCTTGAGAGTGAGCTaGTCAATGGTATGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSLRVS*SMVWKI
Trigger: GATCTTCCATACCATTGAGCAGCTCACTCTCAAGCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCTTCTGTGTGGAAACTaGCCACAGGCGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALELLCGN*PQAWCH
Trigger: GTGGCACCACGCCTGTGGGCAGTTTCCACACAGAAG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGCGGATGCAGTCAGCATaGTTAGGAGACATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACARMQSA*LGDMRP
Trigger: AGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCG...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATCCGAAATTTTCTCTTaGCTCAGCCTCCATGAAACG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSEIFS*LSLHET
Trigger: CGTTTCATGGAGGCTGAGGCAAGAGAAAATTTCGGA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGAGCCACCAGTCTCCTaGTGGATCTTCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAEPPVS*WIFSCN
Trigger: GTTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTCGGGGAGCTCCTGCTaGGGATGGGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSGSSC*GWVLLE
Trigger: CTCCAGCAGGACCCATCCCCAGCAGGAGCTCCCCGA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCGTGGATCTGCTCTTaGATCTCAGGCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSWICS*ISGMAA
Trigger: GGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTTCCAGGTCAGACAGCTaGCCCAGATCATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPSRSDS*PRSSSR
Trigger: CCTAGAGGATGATCTGGGCCAGCTGTCTGACCTGGA...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGTATGCTGCCAATTTTaGGCATCTGGCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVVCCQF*ASGSGS
Trigger: GGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATAC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCCCGGAGCTTCTTCATaGCTTCACACCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFPGASS*LHTRNC
Trigger: ACAATTCCTGGTGTGAAGCCATGAAGAAGCTCCGGG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCCAGCAGCAGCACGTaGAGGTCCAAGGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSSSST*RSKVLS
Trigger: GGATAAGACCTTGGACCTCCACGTGCTGCTGCTGGA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTCCTCTAGCAGGACCTaGTGCTTCCCTTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESSSRT*CFPWTL
Trigger: GAGGGTCCAAGGGAAGCACCAGGTCCTGCTAGAGGA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTTCCATGGTGTGACCTaGCAGCAGGCTCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGFHGVT*QQAPQD
Trigger: ATCCTGTGGAGCCTGCTGCCAGGTCACACCATGGAA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGCACCCACCTCTGCCTaGGGTCTTATGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGAPTSA*GLMEKE
Trigger: CTCTTTCTCCATAAGACCCCAGGCAGAGGTGGGTGC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTACCACTTCCAGGTGTaGGCTATTGGTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAYHFQV*AIGHHG
Trigger: ACCATGGTGACCAATAGCTCACACCTGGAAGTGGTA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTGGGTGGCATGTTTTTaGACTTCGGGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVWVACF*TSGSCR
Trigger: TCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCATCAATGACTCACTaGGGGAAGGAAAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSSMTH*GKESVL
Trigger: CAGAACGCTTTCCTTCCCTCAGTGAGTCATTGATGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGGGCTCATGTAGGTATTaGGGGCGAAGTCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREGSCRY*GRSPWG
Trigger: CCCCCATGGACTTCGCCCTCAATACCTACATGAGCC...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGTTGTTCTCAAAGTGCTaGATGATGTTCCTCACATTG +
Preference number: 4 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLFSKC*MMFLTL
Trigger: CAATGTGAGGAACATCATTCAGCACTTTGAGAACAA...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGAGGTCTGCTTGCTGTCTaGGGAGCCCACAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRGLLAV*GAHSSL
Trigger: AAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACC...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAACCTGACTCCGACTTaGGCAGACCAAGCAACATGC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRNLTPT*ADQATC
Trigger: GCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCCAGGCCGCACAGACTaGACCAGAACAATGCGATCC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREPGRTD*TRTMRS
Trigger: GGATCGCATTGTTCTGGTGCAGTCTGTGCGGCCTGG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTTTCACCATACAGGCTaGCCAGCCCCAGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREFHHTG*PAPVCA
Trigger: AGCGCACACTGGGGCTGGGCAGCCTGTATGGTGAAA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTTGCCCACTGTATGCTaGCAATTTTGGGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACALPTVC*QFWASG
Trigger: GCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCCTTGCCCACTGTATaGTGCCAATTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSLPTV*CQFWAS
Trigger: AGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCATTGATGACCTCTTaGCGGTCAATCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSLMTS*RSISRW
Trigger: CCAGCGGGAGATTGACCGGCAAGAGGTCATCAATGA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTACTTGGTGAGCCGCTaGATCTCAGAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGYLVSR*ISEMMR
Trigger: CCTCATCATCTCTGAGATGCAGCGGCTCACCAAGTA...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCGGCACAGCTTCTCATaGTCAGAGGTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRERHSFS*SEVPPS
Trigger: AGAGGGTGGCACCTCTGAGCATGAGAAGCTGTGCCG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTGGGGCAGCTCCGGGGTaGCTGGTGGCATTCCGCACG +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPGAAPG*LVAFRT
Trigger: CGTGCGGAATGCCACCAGGCACCCCGGAGCTGCCCC...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTCTAGCAGGACCTGGTaGTTCCCTTGGACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRESSRTW*FPWTLC
Trigger: GCAGAGGGTCCAAGGGAAGCACCAGGTCCTGCTAGA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTCAGTTCCTCTTCCTCTaGACTGCCCTCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTQFLFL*TALLLR
Trigger: CCTGAGCAGGAGGGCAGTGCAGAGGAAGAGGAACTG...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGACAACCTTGCTGCCTaGCACCTCAGCTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRDNLAA*HLSFSH
Trigger: GTGAGAAAAGCTGAGGTGGCAGGCAGCAAGGTTGTC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGTAACCTTACACTCATaGTTTCTCGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFVTLHS*FLGVST
Trigger: CGTGGAGACACCGAGAAACCATGAGTGTAAGGTTAC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGTTCCTCACATTGCCTaGTTTGACTTCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAVPHIA*FDFHRG
Trigger: TCCCCTGTGGAAGTCAAACCAGGCAATGTGAGGAAC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGAGGACGAGGCTGACTaGTGCAGGCGAGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMREDEAD*CRRVAS
Trigger: GGAGGCTACTCGCCTGCACCAGTCAGCCTCGTCCTC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAGTGAATGGAGGGGTTaGGTTCTCAAGAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACASEWRG*VLKRPG
Trigger: ACCAGGTCTCTTGAGAACCCAACCCCTCCATTCACT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTTGGGCATCTGGCTCTaGCTCCAGGTCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRELGIWL*LQVRQL
Trigger: CAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTTGGGCATCTGGCTCTaGCTCCAGGTCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKLGIWL*LQVRQL
Trigger: CAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCAGCTCCGGGGTGCCTaGTGGCATTCCGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMQLRGA*WHSARP
Trigger: AGGCCGTGCGGAATGCCACCAGGCACCCCGGAGCTG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTTGAGCAGCTCTCTGTaGGCCAGCTCCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLSSSL*ASSISL
Trigger: CAAGGATATGGAGCTGGCCCACAGAGAGCTGCTCAA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGAACTGCCCACAGGCGTaGTGCCACCAGATGACTCTC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRENCPQA*CHQMTL
Trigger: GAGAGTCATCTGGTGGCACCACGCCTGTGGGCAGTT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTCATGGCTGTTCCTaGAGTCAGAAGCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRVHGCS*SQKLGA
Trigger: AGCCCCTAGCTTCTGACTCCAGGAACAGCCATGAAC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCAGGGCCCCAGTTCATaGCTGTTCCTGGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEQGPSS*LFLESE
Trigger: TTCTGACTCCAGGAACAGCCATGAACTGGGGCCCTG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGAGCTCTTCCAGTAGGCTaGCGGGGTTCCGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRALPVG*RGSGYR
Trigger: TCTATAGCCGGAACCCCGCCAGCCTACTGGAAGAGC...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTCCCCTTGGATGGTCCTaGGTGAATTCAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTPLGWS*VNSGTR
Trigger: CCGAGTCCCTGAATTCACCCAGGACCATCCAAGGGG...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTCATAGGCGCCAGATTTaGTCAGCTTTACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGHRRQI*SALPLP
Trigger: TGGAAGTGGTAAAGCTGATCAAATCTGGCGCCTATG...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGGGTGGCATGTTTTTaGACTTCGGGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRWVACF*TSGSCR
Trigger: TCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGAGAGAGCCGGCCTTCTaGTGGTCTCTGGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRREPAF*WSLAGV
Trigger: GACACCAGCCAGAGACCATCAGAAGGCCGGCTCTCT...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCTCAAAGTGCTGAATaGTGTTCCTCACATTGCCTG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSQSAE*CSSHCL
Trigger: CAGGCAATGTGAGGAACATCATTCAGCACTTTGAGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGCGTTGCTTGGTCTTaGTTAGCTCTAGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACACVAWS*LALGLL
Trigger: CAATAGCCCTAGAGCTAATCAAGACCAAGCAACGCA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGACCATGGAACACGTCTaGGTCATCCAGTTCTACCCT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRTMEHV*VIQFYP
Trigger: AGGGTAGAACTGGATGACTCAGACGTGTTCCATGGT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTACCATGGAACACGTCTaGGTCATCCAGTTCTACCCT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGTMEHV*VIQFYP
Trigger: AGGGTAGAACTGGATGACTCAGACGTGTTCCATGGT...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCACACATATGTGGGGTaGGGGCAGACCATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREHTYVG*GQTMVS
Trigger: ACTCACCATGGTCTGCCCTCACCCCACATATGTGTG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGAATCCTTGGGGCTTaGCTGCTGATAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRGILGA*LLINFC
Trigger: GCAGAAGTTTATCAGCAGGCAAGCCCCAAGGATTCC...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGAACTGTGCAGCCACTTaGTGGAGTTCCTCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRENCAAT*WSSSRA
Trigger: TGCCCGAGAGGAACTCCAGCAAGTGGCTGCACAGTT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAGCTCCTTCCATAACTaGCTCCAGCACTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSSFHN*LQHFRN
Trigger: GTTCCTGAAGTGCTGGAGGCAGTTATGGAAGGAGCT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAACCCCCAGGTGAGCTaGCCGAGACTTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKNPQVS*PRLQFL
Trigger: GAGAAACTGAAGTCTCGGCCAGCTCACCTGGGGGTT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTGCTTCTCAGCCACTTaGCGCTCTCGGAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRCFSAT*RSRRGS
Trigger: GGACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCCTTTTCAGCTGTGTTaGAAGGTCGTGCCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGPFQLC*KVVPLE
Trigger: TTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTTGTGTCCCAGGTTCTaGGGCATCATACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLCPRF*GIILLV
Trigger: AACCAGCAGTATGATGCCCCAGAACCTGGGACACAA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCATTTTGGGAGTGAATaGAGGGGTTGGGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTHFGSE*RGWVLK
Trigger: CTTGAGAACCCAACCCCTCCATTCACTCCCAAAATG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTTGCAGAACCCCAAACTaGGGGACTCAATGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTCRTPN*GTQCSC
Trigger: GCAGGAGCATTGAGTCCCCCAGTTTGGGGTTCTGCA...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTCCAGGTCAGACAGCTaGCCCAGATCATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRESRSDS*PRSSSR
Trigger: CCTAGAGGATGATCTGGGCCAGCTGTCTGACCTGGA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCCAATTTTGGGCATCTaGCTCTGGCTCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEPILGI*LWLQVR
Trigger: TCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTACAGCAGTCTTGCTGTaGCACTTCAGCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQEHSGLAPALGSILELGTAVLL*HFSNSF
Trigger: GAAGCTATTGCTGAAGTGCCACAGCAAGACTGCTGT...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGGGCCCAGTCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGGTTCAGGTTCACCATaGAACACGTCTGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: WGPVLSSVPASLVFYRDRGSGSP*NTSESS
Trigger: GGATGACTCAGACGTGTTCCATGGTGAACCTGAACC...CCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGACTGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTTCCATGGTGTGACCTaGCAGCAGGCTCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKFHGVT*QQAPQD
Trigger: ATCCTGTGGAGCCTGCTGCCAGGTCACACCATGGAA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTCCAGCCCTGCAAGCTaGGTGTTGTCCCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSSPAS*VLSPSP
Trigger: GGGTGAAGGGGACAACACCCAGCTTGCAGGGCTGGA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGATTCCTGTCCAGTTCTaGAGACTCCCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVIPVQF*RLPYPR
Trigger: TCTGGGATATGGGAGTCTCCAGAACTGGACAGGAAT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAGCTGCTCAATGGTATaGAAGATCATGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSCSMV*KIMPTS
Trigger: GGACGTGGGCATGATCTTCCATACCATTGAGCAGCT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGACGCAGAGGATTTGGTaGTTTGTACGGTTATGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACATQRIW*FVRLWS
Trigger: GGACCATAACCGTACAAACCACCAAATCCTCTGCGT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGGGACGCAGAGGATTTaGTGGTTTGTACGGTTATGG +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGGTQRI*WFVRLW
Trigger: CCATAACCGTACAAACCACCAAATCCTCTGCGTCCC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGGGACGCAGAGGATTTaGTGGTTTGTACGGTTATGG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRGTQRI*WFVRLW
Trigger: CCATAACCGTACAAACCACCAAATCCTCTGCGTCCC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGAGGCCTTGGAGGGTTaGGCTAAGGGAGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKEALEG*AKGGKR
Trigger: TCTTTTCCCTCCCTTAGCCCAACCCTCCAAGGCCTC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGTACACACATATGTaGGGTGAGGGCAGACCATGG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEVYTHM*GEGRPW
Trigger: CCATGGTCTGCCCTCACCCCACATATGTGTGTACAC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGATTTGAGTTCGAGGTaGGTTTTTCTTCCACACCAG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFDLSSR*VFLPHQ
Trigger: CTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGGGCCAATGCTGCGGTaGCCCCTTGGATGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVGPMLR*PLGWSW
Trigger: CCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTTGTCGCTCTCGTTGTTaGAATAACCCGGGTCATAGT +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPCRSRC*NNPGHS
Trigger: ACTATGACCCGGGTTATTTCAACAACGAGAGCGACA...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCTTCCCGGCCCTTaGGGCTTTCAGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMSLPGP*GFQSGP
Trigger: TGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCTCTTCCCGGCCCTTaGGGCTTTCAGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVSLPGP*GFQSGP
Trigger: TGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGATCTCAGCCTCCTGCATaGAGAGCTGGAATCGACTCT +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRSQPPA*RAGIDS
Trigger: AGAGTCGATTCCAGCTCTTCATGCAGGAGGCTGAGA...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAAAGACACTGAAACCTaGCTCCGACTTGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEKDTET*LRLEQT
Trigger: GGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTTTCACTTGCATGTCTaGGGGCAGCGCACATACAGG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREFHLHV*GQRTYR
Trigger: CCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGATCTTCAGCTGTAACTaGGTGACTCGCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRIFSCN*VTRRRA
Trigger: TGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGAT...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTCCTTCCAAGTCCAGTaGAACCCTGGGAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGSFQVQ*NPGNQN
Trigger: ATTTTGGTTCCCAGGGTTGCACTGGACTTGGAAGGA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGAGGACTTGCGCTCTGGTaGAGAATCTCCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGRGLALW*RISQRR
Trigger: TCTTCTCTGGGAGATTCTGCACCAGAGCGCAAGTCC...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGAAGCCGAAGCCATaGTGGTCCTTTTGGATAATG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRVKPKP*WSFWIM
Trigger: CATTATCCAAAAGGACCAGCATGGCTTCGGCTTCAC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGGATCTCAGGCATGGCTaGCTCTTGAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREDLRHG*LLSFTE
Trigger: CTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATC...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCCAAGGGCAGCCAGCTaGTTCTCAGCCACTTGGCGC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVPRAAS*FSATWR
Trigger: GCGCCAAGTGGCTGAGAAGCAGCTGGCTGCCCTTGG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGGGAATATGAAATGTaGTTTGAGAAGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRREYEM*FEKSFW
Trigger: CCAAAAGCTCTTCTCAAAGCACATTTCATATTCCCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTCTGGGGCATCATACTaGTGGTTGTTCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSGASY*WLFSKC
Trigger: GCACTTTGAGAACAACCAGCAGTATGATGCCCCAGA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCGACTCTCCTTGCGTTaGTTGGTCTTGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRRLSLR*LVLISS
Trigger: AGAGCTAATCAAGACCAAGCAACGCAAGGAGAGTCG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCTCCTGCTGCCTCTGTaGTTGAAGCATCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLRELLLPL*LKHLQP
Trigger: TGGCTGAAGATGCTTCAAGCACAGAGGCAGCAGGAG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGAGGCTCTGTCTGCCCTaGAGGGAGGCTGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMRLCLP*REAVRL
Trigger: CAGCCTGACAGCCTCCCTGCAGGGCAGACAGAGCCT...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAGCTTGAGAGTGAGCTaGTCAATGGTATGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACASLRVS*SMVWKI
Trigger: GATCTTCCATACCATTGAGCAGCTCACTCTCAAGCT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTGCCCACAGGCGTGGTaGCACCAGATGACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVCPQAW*HQMTLP
Trigger: GGGGAGAGTCATCTGGTGGCACCACGCCTGTGGGCA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCGGATGCAGTCAGCATaGTTAGGAGACATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKRMQSA*LGDMRP
Trigger: AGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGAGGCATCCGAAGGCTaGCGATGGTGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMEASEG*RWWEGD
Trigger: GTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCACACCGGCCTTCATaGCTGCACCTCCAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMSHRPS*LHLQAA
Trigger: TGCGGCCTGGAGGTGCAGCCATGAAGGCCGGTGTGA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGAGGACGAGGCTGACTaGTGCAGGCGAGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVEDEAD*CRRVAS
Trigger: GGAGGCTACTCGCCTGCACCAGTCAGCCTCGTCCTC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTCCAATTTTGGGCATCTaGCTCTGGCTCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTPILGI*LWLQVR
Trigger: TCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGG...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTCCTGCATGAAGAGCTaGAATCGACTCTCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESCMKS*NRLSLR
Trigger: ACGCAAGGAGAGTCGATTCCAGCTCTTCATGCAGGA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCCCTCTCCAGGGCGGTaGCATCCAGGCGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVPSPGR*HPGVSG
Trigger: ACCAGAAACGCCTGGATGCCACCGCCCTGGAGAGGG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGACAGCAGTCTTGCTGTaGCACTTCAGCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRTAVLL*HFSNSF
Trigger: GAAGCTATTGCTGAAGTGCCACAGCAAGACTGCTGT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGATATCCCAGAATTTCTaGTCCTTGGGGGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLLLSLACLRAAHIQACAISQNF*SLGVGV
Trigger: AACACCTACCCCCAAGGACCAGAAATTCTGGGATAT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAGCTGCTCAATGGTATaGAAGATCATGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESCSMV*KIMPTS
Trigger: GGACGTGGGCATGATCTTCCATACCATTGAGCAGCT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGCCCCCGGGCCTTGGCTaGATCCTAGTTTCCCTAACT +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRPPGLG*ILVSLT
Trigger: AGTTAGGGAAACTAGGATCCAGCCAAGGCCCGGGGG...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGGAGACATGAGGCCTTaGAGGGTTGGGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRGDMRP*RVGLRE
Trigger: CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTTCCACACCAGACTCCTaGAAAATCCGATCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTSTPDS*KIRSPV
Trigger: GACAGGCGATCGGATTTTCCAGGAGTCTGGTGTGGA...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCGTACCTGCTTCACTaGTTTTCTACAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPYLLH*FSTGTG
Trigger: CCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTAGCTTTGGTGTCTTaGTCAGGATTGAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRVALVS*SGLNRL
Trigger: CAAGCGATTCAATCCTGATCAAGACACCAAAGCTAC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTGTTCCGATTCATCAATaGCTCACTGAGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPVPIHQ*LTEGRK
Trigger: TTTCCTTCCCTCAGTGAGTCATTGATGAATCGGAAC...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTGTCGCTCTCGTTGTTaGAATAACCCGGGTCATAGT +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALECRSRC*NNPGHS
Trigger: ACTATGACCCGGGTTATTTCAACAACGAGAGCGACA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTAATTGTGAATCTCTATaGGTTCAGGCAGGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPNCESL*VQAGSG
Trigger: TCCCGAACCTGCCTGAACTCATAGAGATTCACAATT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTCACACCAGGAATTGTaGATCTCTATGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSHQEL*ISMSSG
Trigger: GCCTGAACTCATAGAGATTCACAATTCCTGGTGTGA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTGCTGCCTCTGTGCTTaGAGCATCTTCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKCCLCA*SIFSQI
Trigger: AATCTGGCTGAAGATGCTTCAAGCACAGAGGCAGCA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCGTGGTGCCACCAGATaGCTCTCCCCCAAGGGACTT +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMRGATR*LSPKGL
Trigger: AAGTCCCTTGGGGGAGAGTCATCTGGTGGCACCACG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCTCCTTAGCGGGAGGTaGGAGGGAGCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVLLSGR*EGAICP
Trigger: TGGACAGATGGCTCCCTCTCACCTCCCGCTAAGGAG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGAAAGACACTGAAACCTaGCTCCGACTTGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREKDTET*LRLEQT
Trigger: GGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCTGGGTGAGGACGTGGTaGTGGGGCCAATGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFWVRTW*WGQCCG
Trigger: ACCGCAGCATTGGCCCCATCACCACGTCCTCACCCA...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTCCTTCCAAGTCCAGTaGAACCCTGGGAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESFQVQ*NPGNQN
Trigger: ATTTTGGTTCCCAGGGTTGCACTGGACTTGGAAGGA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCACCGGCCTTCATGGCTaGACCTCCAGGCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFTGLHG*TSRPHR
Trigger: TCTGTGCGGCCTGGAGGTGCAGCCATGAAGGCCGGT...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTCCAAGGGCAGCCAGCTaGTTCTCAGCCACTTGGCGC +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPPRAAS*FSATWR
Trigger: GCGCCAAGTGGCTGAGAAGCAGCTGGCTGCCCTTGG...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTAGCCCACAGCAGTCTTaGTGTGGCACTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTSPQQS*CGTSAI
Trigger: TATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCT...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCACGGGGCTGAAGGTCTaGTTGCTGTCTGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVTGLKV*LLSEEP
Trigger: GGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTGCACTGCCCTCCTaGTCAGGGTCCTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMSALPS*SGSSSR
Trigger: CCTGCTAGAGGACCCTGAGCAGGAGGGCAGTGCAGA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCAGGCTCTGTCTGCCCTaGAGGGAGGCTGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFRLCLP*REAVRL
Trigger: CAGCCTGACAGCCTCCCTGCAGGGCAGACAGAGCCT...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGTCTTGGATCATCGTTaGCTCCCTGCAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRVLDHR*LPAAEA
Trigger: AGCCTCAGCTGCAGGGAGGCAACGATGATCCAAGAC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAACCTGTCTATACTCTaGGGTAACCTTACACTCATG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVNLSIL*GNLTLM
Trigger: CATGAGTGTAAGGTTACCCCAGAGTATAGACAGGTT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAAGCCGAAGCCATGCTaGTCCTTTTGGATAATGACA +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRKPKPC*SFWIMT
Trigger: TGTCATTATCCAAAAGGACCAGCATGGCTTCGGCTT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCTGATGGTCTCTGGCTaGTGTCACCATATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALELMVSG*CHHIVE
Trigger: TTCCACTATATGGTGACACCAGCCAGAGACCATCAG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCCTTCTGATGGTCTCTaGCTGGTGTCACCATATAGT +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEPSDGL*LVSPYS
Trigger: ACTATATGGTGACACCAGCCAGAGACCATCAGAAGG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAGTTTCTCCAGATCCTaGAATATGATGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSFSRS*NMMSLS
Trigger: CGAGAGCGACATCATATTCCAGGATCTGGAGAAACT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTAGCTTCGGGAATCCTTaGGGCTTGCCTGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTSFGNP*GLPADK
Trigger: TTTATCAGCAGGCAAGCCCCAAGGATTCCCGAAGCT...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTGTCTTCCTCATACTTaGACAAAATATCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFCLPHT*TKYLQG
Trigger: CCCTTGGAGATATTTTGTCCAAGTATGAGGAAGACA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCTTTTCAGCTGTGTTaGAAGGTCGTGCCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPFQLC*KVVPLE
Trigger: TTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAGTGAATGGAGGGGTTaGGTTCTCAAGAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKSEWRG*VLKRPG
Trigger: ACCAGGTCTCTTGAGAACCCAACCCCTCCATTCACT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCCCGGAGCTTCTTCATaGCTTCACACCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKPGASS*LHTRNC
Trigger: ACAATTCCTGGTGTGAAGCCATGAAGAAGCTCCGGG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTATATCCCAGAATTTCTaGTCCTTGGGGGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPISQNF*SLGVGV
Trigger: AACACCTACCCCCAAGGACCAGAAATTCTGGGATAT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGCTAGCTGCTTCTGTGTaGAAACTGCCCACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRLAASV*KLPTGV
Trigger: CACGCCTGTGGGCAGTTTCCACACAGAAGCAGCTAG...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGCACCCACCTCTGCCTaGGGTCTTATGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRAPTSA*GLMEKE
Trigger: CTCTTTCTCCATAAGACCCCAGGCAGAGGTGGGTGC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTCACATTGCCTGGTTTaGCTTCCACAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSHCLV*LPQGTR
Trigger: CCTTGTCCCCTGTGGAAGTCAAACCAGGCAATGTGA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAATTGTGAATCTCTATaGGTTCAGGCAGGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALENCESL*VQAGSG
Trigger: TCCCGAACCTGCCTGAACTCATAGAGATTCACAATT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTCGTGGTGCCACCAGATaGCTCTCCCCCAAGGGACTT +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPRGATR*LSPKGL
Trigger: AAGTCCCTTGGGGGAGAGTCATCTGGTGGCACCACG...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTTTCACTTGCATGTCTaGGGGCAGCGCACATACAGG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRFHLHV*GQRTYR
Trigger: CCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGCCCAGGAGGGTGAGTaGGACATAGGCGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMAQEGE*DIGARF
Trigger: AAATCTGGCGCCTATGTCGCACTCACCCTCCTGGGC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGATCTCAGGCATGGCTaGCTCTTGAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRDLRHG*LLSFTE
Trigger: CTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGCGACTCTCCTTGCGTTaGTTGGTCTTGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKRLSLR*LVLISS
Trigger: AGAGCTAATCAAGACCAAGCAACGCAAGGAGAGTCG...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCGGCACAGCTTCTCATaGTCAGAGGTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVRHSFS*SEVPPS
Trigger: AGAGGGTGGCACCTCTGAGCATGAGAAGCTGTGCCG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCAGGCTCTTGAACTCTaGTGCCAGGGGGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFQALEL*CQGVAG
Trigger: GCCAGCAACCCCCTGGCAGCAGAGTTCAAGAGCCTG...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCAGTTCCTCTTCCTCTaGACTGCCCTCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVQFLFL*TALLLR
Trigger: CCTGAGCAGGAGGGCAGTGCAGAGGAAGAGGAACTG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGCTCCTGCTGCCTCTGTaGTTGAAGCATCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRLLLPL*LKHLQP
Trigger: TGGCTGAAGATGCTTCAAGCACAGAGGCAGCAGGAG...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGATCTGTCCATCTAGCTaGTTCTGTGTGGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKICPSS*FCVETA
Trigger: GGCAGTTTCCACACAGAAGCAGCTAGATGGACAGAT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGATCTGTCCATCTAGCTaGTTCTGTGTGGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREICPSS*FCVETA
Trigger: GGCAGTTTCCACACAGAAGCAGCTAGATGGACAGAT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTCGGGCACCTTCGATCTaGTCTTCCAGTAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPRAPSI*SSSRLA
Trigger: CGCCAGCCTACTGGAAGAGCAGATCGAAGGTGCCCG...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGGTAACCTTACACTCATaGTTTCTCGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREVTLHS*FLGVST
Trigger: CGTGGAGACACCGAGAAACCATGAGTGTAAGGTTAC...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAACCTGTCTATACTCTaGGGTAACCTTACACTCATG +
Preference number: 4 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRNLSIL*GNLTLM
Trigger: CATGAGTGTAAGGTTACCCCAGAGTATAGACAGGTT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAGTTTCTCCAGATCCTaGAATATGATGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESFSRS*NMMSLS
Trigger: CGAGAGCGACATCATATTCCAGGATCTGGAGAAACT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCAGGGGTCCCTCATaGATCATTTTTCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEVRGPS*IIFLVV
Trigger: TACAACCAGAAAAATGATCCATGAGGGACCCCTGAC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCATGGGTGCCTCTGAGTaGTCGGTGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFMGASE*SVLESG
Trigger: CCCGGACTCAAGCACCGACCACTCAGAGGCACCCAT...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGTGTACACACATATGTaGGGTGAGGGCAGACCATGG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRVYTHM*GEGRPW
Trigger: CCATGGTCTGCCCTCACCCCACATATGTGTGTACAC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTAGGGAGGGAGTAGCTTaGCAGCAAGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPREGVA*QQAVEG
Trigger: GCCCTCCACAGCTTGCTGCCAAGCTACTCCCTCCCT...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCGGTGGCCCCTTGGATaGTCCTGGGTGAATTCAGGG +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFRWPLG*SWVNSG
Trigger: CCCTGAATTCACCCAGGACCATCCAAGGGGCCACCG...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGATAATGACACAGCGTTaGACGAGACCTGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: MQSACLGDMRPWRVGLREIMTQR*TRPVVS
Trigger: TGAGACAACAGGTCTCGTTCAACGCTGTGTCATTAT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTGCTGCCTCTGTGCTTaGAGCATCTTCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRCCLCA*SIFSQI
Trigger: AATCTGGCTGAAGATGCTTCAAGCACAGAGGCAGCA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTTATTATTGTGGATTTaGGTTCGAGGTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVLLLWI*VRGGFF
Trigger: GAAAAACCCACCTCGAACTCAAATCCACAATAATAA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTAATTCTTTTTCTTCCTaGCTCAGCATATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPNSFSS*LSIFLR
Trigger: CCTCAGGAATATGCTGAGGCAGGAAGAAAAAGAATT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCTTTCACCATACAGGCTaGCCAGCCCCAGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFFHHTG*PAPVCA
Trigger: AGCGCACACTGGGGCTGGGCAGCCTGTATGGTGAAA...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAGGGAATATGAAATGTaGTTTGAGAAGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVREYEM*FEKSFW
Trigger: CCAAAAGCTCTTCTCAAAGCACATTTCATATTCCCT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGCGGGGCACGTTCTCTaGCTTTCGAGACCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVAGHVL*LSRPFH
Trigger: ATGAAACGGTCTCGAAAGGCAGAGAACGTGCCCCGC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCCATGTCAACATCACTaGGAGAGCGGGGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVPCQHH*ESGARS
Trigger: AGAACGTGCCCCGCTCTCGCAGTGATGTTGACATGG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGAAGGAGGGTATCTGTaGAGAACCCCAAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMEGGYL*RTPNWG
Trigger: CCCCCAGTTTGGGGTTCTGCACAGATACCCTCCTTC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCTTCTGTGTGGAAACTaGCCACAGGCGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFLLCGN*PQAWCH
Trigger: GTGGCACCACGCCTGTGGGCAGTTTCCACACAGAAG...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGAGGGGACTTGCGCTCTaGTGCAGAATCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMRGLAL*CRISQR
Trigger: TCTCTGGGAGATTCTGCACCAGAGCGCAAGTCCCCT...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAAGCCGAAGCCATGCTaGTCCTTTTGGATAATGACA +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKKPKPC*SFWIMT
Trigger: TGTCATTATCCAAAAGGACCAGCATGGCTTCGGCTT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGAGCTTCGGGAATCCTTaGGGCTTGCCTGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSFGNP*GLPADK
Trigger: TTTATCAGCAGGCAAGCCCCAAGGATTCCCGAAGCT...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTCCTGCATGAAGAGCTaGAATCGACTCTCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSCMKS*NRLSLR
Trigger: ACGCAAGGAGAGTCGATTCCAGCTCTTCATGCAGGA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTGTCAGGGGTCCCTCATaGATCATTTTTCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTVRGPS*IIFLVV
Trigger: TACAACCAGAAAAATGATCCATGAGGGACCCCTGAC...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCTAGCTGCTTCTGTGTaGAAACTGCCCACAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVLAASV*KLPTGV
Trigger: CACGCCTGTGGGCAGTTTCCACACAGAAGCAGCTAG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCAGGGCCCCAGTTCATaGCTGTTCCTGGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMQGPSS*LFLESE
Trigger: TTCTGACTCCAGGAACAGCCATGAACTGGGGCCCTG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGAGGCCTTGGAGGGTTaGGCTAAGGGAGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMEALEG*AKGGKR
Trigger: TCTTTTCCCTCCCTTAGCCCAACCCTCCAAGGCCTC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
3UTR CAA 72 bp CCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTaGTTAACTAAGGAGATACAAGTGAAACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSRFRLDPGTG*LTKEIQVKPLF
Trigger: GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCACATTGCCTGGTTTaGCTTCCACAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVSHCLV*LPQGTR
Trigger: CCTTGTCCCCTGTGGAAGTCAAACCAGGCAATGTGA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTTGCCTCAGCCTCCATaGAACGGAGATTTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVLPQPP*NGDFAS
Trigger: GGAAGCGAAATCTCCGTTTCATGGAGGCTGAGGCAA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGTGAAGCCGAAGCCATaGTGGTCCTTTTGGATAATG +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRVKPKP*WSFWIM
Trigger: CATTATCCAAAAGGACCAGCATGGCTTCGGCTTCAC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCTCCAGCAGCAGCACGTaGAGGTCCAAGGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFSSSST*RSKVLS
Trigger: GGATAAGACCTTGGACCTCCACGTGCTGCTGCTGGA...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGATTCCTGTCCAGTTCTaGAGACTCCCATATCCCAGA +
Preference number: 4 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRIPVQF*RLPYPR
Trigger: TCTGGGATATGGGAGTCTCCAGAACTGGACAGGAAT...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTTGAGCAGCTCTCTGTaGGCCAGCTCCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMLSSSL*ASSISL
Trigger: CAAGGATATGGAGCTGGCCCACAGAGAGCTGCTCAA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTACCACTTCCAGGTGTaGGCTATTGGTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVYHFQV*AIGHHG
Trigger: ACCATGGTGACCAATAGCTCACACCTGGAAGTGGTA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAATTCTTTTTCTTCCTaGCTCAGCATATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKNSFSS*LSIFLR
Trigger: CCTCAGGAATATGCTGAGGCAGGAAGAAAAAGAATT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTTGCCCACTGTATGCTaGCAATTTTGGGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMLPTVC*QFWASG
Trigger: GCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR GCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTGACAACCTTGCTGCCTaGCACCTCAGCTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPDNLAA*HLSFSH
Trigger: GTGAGAAAAGCTGAGGTGGCAGGCAGCAAGGTTGTC...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCCTCAGCTCCGTACCTaGTTCACTGGTTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMPQLRT*FTGFLQ
Trigger: CTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTTGTCTTCCTCATACTTaGACAAAATATCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTCLPHT*TKYLQG
Trigger: CCCTTGGAGATATTTTGTCCAAGTATGAGGAAGACA...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGTTCCTCACATTGCCTaGTTTGACTTCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVVPHIA*FDFHRG
Trigger: TCCCCTGTGGAAGTCAAACCAGGCAATGTGAGGAAC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGGTTCAGGTTCACCATaGAACACGTCTGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMGSGSP*NTSESS
Trigger: GGATGACTCAGACGTGTTCCATGGTGAACCTGAACC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCAGGACCCTGGTAACTaGTGCTCCACTCTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFQDPGN*CSTLLL
Trigger: TAGAAGTAGAGTGGAGCATCAGTTACCAGGGTCCTG...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCATAGGCGCCAGATTTaGTCAGCTTTACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMHRRQI*SALPLP
Trigger: TGGAAGTGGTAAAGCTGATCAAATCTGGCGCCTATG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGGTAAGAAACCCCCATaGTCCCCATCTTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVGKKPP*SPSCED
Trigger: ATCTTCACAAGATGGGGATCATGGGGGTTTCTTACC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR GCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCCTTGCCCACTGTATaGTGCCAATTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVSLPTV*CQFWAS
Trigger: AGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTTGTCAGGAGCAGACTaGGCCTTTTCAGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPLSGAD*AFSAVL
Trigger: CAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAA...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCACGCAGAGGATTTGGTaGTTTGTACGGTTATGGTCC +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVTQRIW*FVRLWS
Trigger: GGACCATAACCGTACAAACCACCAAATCCTCTGCGT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGTTCCGATTCATCAATaGCTCACTGAGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVVPIHQ*LTEGRK
Trigger: TTTCCTTCCCTCAGTGAGTCATTGATGAATCGGAAC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCAAAGTGCTGAATaGTGTTCCTCACATTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMSQSAE*CSSHCL
Trigger: CAGGCAATGTGAGGAACATCATTCAGCACTTTGAGA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR TCA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTGCGTTGCTTGGTCTTaGTTAGCTCTAGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPCVAWS*LALGLL
Trigger: CAATAGCCCTAGAGCTAATCAAGACCAAGCAACGCA...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTCTGATGGTCTCTaGCTGGTGTCACCATATAGT +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFPSDGL*LVSPYS
Trigger: ACTATATGGTGACACCAGCCAGAGACCATCAGAAGG...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR TCA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCTTGTTCTCAAAGTGCTaGATGATGTTCCTCACATTG +
Preference number: 4 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFLFSKC*MMFLTL
Trigger: CAATGTGAGGAACATCATTCAGCACTTTGAGAACAA...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS GCA 90 bp CTCCCTTTCCGCCCCTCGCCTAATCTCGCAGGCAGGAGCCCGCAGTaGCTCGCGCAGGACGCCCGGCCGGGCCTCGGGCTCCCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: LPFRPSPNLAGRSPQ*LAQDARPGLGLPAP
Trigger: CGGCGCCGGGAGCCCGAGGCCCGGCCGGGCGTCCTGCGCGAGGCACTGCGGGCTCCTGCCTGCGAGATTAGGCGAGGGGCGGAAAGGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCCTCTCGGCCTCTCCTaGCCTCCCTTTCCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQPLGLS*PPFPPL
Trigger: GAGGGGCGGAAAGGGAGGCAAGGAGAGGCCGAGAGG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS CCA 90 bp GAGCCTTCGGGAAGGTGGAGGGTGCAGGCGCCTGCCAGTTCACACTaGGTGTGCGACTGGGGACCAGGGGCTGACGGCAGGGCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: EPSGRWRVQAPASSH*VCDWGPGADGRALK
Trigger: CTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCCTGCACCCTCCACCTTCCCGAAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCACCCTGGTCACCGGTaGAGGGGACTGCTGCATCCG +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQHPGHR*RGLLHP
Trigger: CGGATGCAGCAGTCCCCTCAACCGGTGACCAGGGTG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp TCACCGGTTGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTGGTaGTGGGCCACCCTGGCCATGATCACAGGGGAGGTTCGAGGACTG +
Preference number: 5 (lower is better)
Translates to: SPVEGTAASEPCRLW*WATLAMITGEVRGL
Trigger: CAGTCCTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS GCA 90 bp TCTACACCCTGGTCACCGGTTGAGGGGACTGCTGCATCCGAGCCCTaGCGCCTGTGGTGCTGGGCCACCCTGGCCATGATCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: STPWSPVEGTAASEP*RLWCWATLAMITGE
Trigger: CTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGGTGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp TCGGGAAGGTGGAGGGTGCAGGCGCCTGCCAGTTCACACTGGGTGTaGGACTGGGGACCAGGGGCTGACGGCAGGGCCTTGAAGCACTCA +
Preference number: 5 (lower is better)
Translates to: SGRWRVQAPASSHWV*DWGPGADGRALKHS
Trigger: TGAGTGCTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCCTGCACCCTCCACCTTCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 90 bp TCACTCACCTGGTCACCGGTTGAGGGGACTGCTGCATCCGAGCCCTaGCGCCTGTGGTGCTGGGCCACCCTGGCCATGATCACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SLTWSPVEGTAASEP*RLWCWATLAMITGE
Trigger: CTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS CCA 90 bp CCGGTTGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTGGTGCTaGGCCACCCTGGCCATGATCACAGGGGAGGTTCGAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: PVEGTAASEPCRLWC*ATLAMITGEVRGLS
Trigger: AGACAGTCCTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS CCA 90 bp TGGTCACCGGTTGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTaGTGCTGGGCCACCCTGGCCATGATCACAGGGGAGGTTCGAGGA +
Preference number: 5 (lower is better)
Translates to: WSPVEGTAASEPCRL*CWATLAMITGEVRG
Trigger: TCCTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS TCA 90 bp CTGCATCCGAGCCCTGCCGCCTGTGGTGCTGGGCCACCCTGGCCATaGTCACAGGGGAGGTTCGAGGACTGTCTAGCCCAGGGTCTGACA +
Preference number: 5 (lower is better)
Translates to: LHPSPAACGAGPPWP*SQGRFEDCLAQGLT
Trigger: TGTCAGACCCTGGGCTAGACAGTCCTCGAACCTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS TCA 90 bp GGCGCCTGCCAGTTCACACTGGGTGTGCGACTGGGGACCAGGGGCTaGCGGCAGGGCCTTGAAGCACTCACCATCTTCCAGAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: GACQFTLGVRLGTRG*RQGLEALTIFQSGV
Trigger: GACTCCGCTCTGGAAGATGGTGAGTGCTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp AGGTGGAGGGTGCAGGCGCCTGCCAGTTCACACTGGGTGTGCGACTaGGGACCAGGGGCTGACGGCAGGGCCTTGAAGCACTCACCATCT +
Preference number: 5 (lower is better)
Translates to: RWRVQAPASSHWVCD*GPGADGRALKHSPS
Trigger: AGATGGTGAGTGCTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCCTGCACCCTCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATCCGGTCGAGAGTCGTaGTGTCCCAGGTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSGRES*CPRFWG
Trigger: GCCCCAGAACCTGGGACACAACGACTCTCGACCGGA...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAATCTCTTCCCGGCCCTaGAGGCTTTCAGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRISSRP*RLSERP
Trigger: GGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGAT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGACTGAGTGGTCGGTGCTaGAGTCCGGGGGTCCTGATG +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRLSGRC*SPGVLM
Trigger: CATCAGGACCCCCGGACTCAAGCACCGACCACTCAG...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp CACACTGGGTGTGCGACTGGGGACCAGGGGCTGACGGCAGGGCCTTaGAGCACTCACCATCTTCCAGAGCGGAGTCAGCGAGCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: HTGCATGDQGLTAGP*STHHLPERSQRALP
Trigger: TGGAAGGGCTCGCTGACTCCGCTCTGGAAGATGGTGAGTGCTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 90 bp AGGAAAACTGCAGGGTGGCTCCAGATCACTCACCTGGTCACCGGTTaGGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RKTAGWLQITHLVTG*GDCCIRALPPVVLG
Trigger: GCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGATCTGGAGCCACCCTGCAGTTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS GCA 90 bp CTGCCACCTCTACTGCCCTTGGAGCTGTTGCCTGGCGTGAGGGGCTaGATGCACCTGCCCTGTCTTTCCCGGCCTGAGGCTCCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LPPLLPLELLPGVRG*MHLPCLSRPEAPEK
Trigger: CTTCTCAGGAGCCTCAGGCCGGGAAAGACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTCTGCTGCCAGGGGGTaGCTGGCCCTCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGSAARG*LALSRA
Trigger: CGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAGA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTGAGGATGGACGGGCATaGGGGCAGCTCCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPEDGRA*GQLRGA
Trigger: GGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCTC...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS GCA 90 bp AGACTCCTGGAAAATCCGATCGCCTGTCTCCTCTCGGCCTCTCCTTaGCTCCCTTTCCGCCCCTCGCCTAATCTCGCAGGCAGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RLLENPIACLLSASP*LPFRPSPNLAGRSP
Trigger: CGGGCTCCTGCCTGCGAGATTAGGCGAGGGGCGGAAAGGGAGGCAAGGAGAGGCCGAGAGGAGACAGGCGATCGGATTTTCCAGGAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGATGGTGCCGTTGACTTaGATGATCCGGTCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQMVPLT*MIRSPS
Trigger: AGAGGGCGACCGGATCATCAAAGTCAACGGCACCAT...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTCACCCTGGTCACCGGTaGAGGGGACTGCTGCATCCG +
Preference number: 5 (lower is better)
Translates to: GQEHSGLAPALGSILELGHPGHR*RGLLHP
Trigger: CGGATGCAGCAGTCCCCTCAACCGGTGACCAGGGTG...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGCACAGCATTGAGCTaGAGCACGGGGCTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRSTALS*STGLKV
Trigger: GACCTTCAGCCCCGTGCTCAAGCTCAATGCTGTGCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGACCTGGTGCTTCCCTaGGACCCTCTGCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVDLVLP*DPLLGP
Trigger: GGGTCCCAGCAGAGGGTCCAAGGGAAGCACCAGGTC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp GGGATCACTGACGTGATTCGGGGAGCTCCTGCTGGGGATGGGTCCTaGTGGAGCCCAGAGATGCCCATGGATGAAGGTGAAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GITDVIRGAPAGDGS*WSPEMPMDEGEEPR
Trigger: CCTGGGCTCTTCACCTTCATCCATGGGCATCTCTGGGCTCCAGCAGGACCCATCCCCAGCAGGAGCTCCCCGAATCACGTCAGTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCTGGGTGGCATGTTTTaGAACTTCGGGATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLGGMF*NFGILQ
Trigger: CTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGCTCACATTGCCTGGTTaGACTTCCACAGGGGACAAG +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQLTLPG*TSTGDK
Trigger: CTTGTCCCCTGTGGAAGTCAAACCAGGCAATGTGAG...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGACCTGGTGCTTCCCTaGGACCCTCTGCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGDLVLP*DPLLGP
Trigger: GGGTCCCAGCAGAGGGTCCAAGGGAAGCACCAGGTC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTCTCCCCCAAGGGACTaGAGCAGCTCTCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACASPPRD*SSSLWA
Trigger: GGCCCACAGAGAGCTGCTCAAGTCCCTTGGGGGAGA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGGGGACGCAGAGGATTaGGTGGTTTGTACGGTTATG +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQGDAED*VVCTVM
Trigger: CATAACCGTACAAACCACCAAATCCTCTGCGTCCCC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp AGCTGCTTCTGTGTGGAAACTGCCCACAGGCGTGGTGCCACCAGATaGCTCTCCCCCAAGGGACTTGAGCAGCTCTCTGTGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SCFCVETAHRRGATR*LSPKGLEQLSVGQL
Trigger: GAGCTGGCCCACAGAGAGCTGCTCAAGTCCCTTGGGGGAGAGTCATCTGGTGGCACCACGCCTGTGGGCAGTTTCCACACAGAAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS GCA 90 bp GTCCTTGGGGGTAGGTGTTCCAGAGAACAGAGACCCATGTCTTCCTaGTCTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGGGTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: VLGGRCSREQRPMSS*SGRSPSSPASWVLS
Trigger: GGACAACACCCAGCTTGCAGGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATGGGTCTCTGTTCTCTGGAACACCTACCCCCAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 90 bp GTAGCCTTTGTTCCGCCTTCCACTTCAGGTGGCCCAGGCTCTGACTaGCCACTCTCTGGTAGTGCAGGGACAACCTTGCTGCCTGCCACC +
Preference number: 5 (lower is better)
Translates to: VAFVPPSTSGGPGSD*PLSGSAGTTLLPAT
Trigger: GGTGGCAGGCAGCAAGGTTGTCCCTGCACTACCAGAGAGTGGCCAGTCAGAGCCTGGGCCACCTGAAGTGGAAGGCGGAACAAAGGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 90 bp CCCCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTaGGGACGCAGAGGATTTGGTGGTTTGTACGGTTATGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PLPCAPVSGQSLKEE*GRRGFGGLYGYGPG
Trigger: ACCAGGACCATAACCGTACAAACCACCAAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 90 bp CTACTTTTCTTGCCACCCTCTCAGACCAGCCCACTCTTCCCGGGGTaGGGACCTTCCTCCCTGGGCTCATCTATTGGCCTCCCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLFLPPSQTSPLFPG*GPSSLGSSIGLPVS
Trigger: GCTCACAGGGAGGCCAATAGATGAGCCCAGGGAGGAAGGTCCCCACCCCGGGAAGAGTGGGCTGGTCTGAGAGGGTGGCAAGAAAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGTCGTGGATCTGCTCTaGGATCTCAGGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFVVDLL*DLRHGC
Trigger: GCAGCCATGCCTGAGATCCAAGAGCAGATCCACGAC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGGTAGCCACTTGTCCTaGTCAGGAGCAGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVGSHLS*SGADWA
Trigger: GGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTATCTCTTCCCGGCCCTaGAGGCTTTCAGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPISSRP*RLSERP
Trigger: GGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGAT...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGGGCTGAAGGTCTGCTaGCTGTCTGAGGAGCCCACA +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACAGLKVC*LSEEPT
Trigger: TGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGGGTGGGCCCAGCTaGGAGGTGCAGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACAWGGPS*EVQMMK
Trigger: CTTCATCATCTGCACCTCCAAGCTGGGCCCACCCCA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAGCGGCTGGGGCGTCTaGGATCATCGTTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSGWGV*DHRCLP
Trigger: AGGGAGGCAACGATGATCCAAGACGCCCCAGCCGCT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGCCAGCTCCATATCCTaGAGCCTGTTGAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRASSIS*SLLSLR
Trigger: TCTCAAGCTCAACAGGCTCAAGGATATGGAGCTGGC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp GCAGGTTCTCCACATCTTCCAGAGCGGAGTCAGCGAGCCCTTCCATaGACAGAGGGCCTGGGAAGGCCAAGTGGATGGGGTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AGSPHLPERSQRALP*TEGLGRPSGWGSLS
Trigger: GGACAAGGAACCCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTGACTCCGCTCTGGAAGATGTGGAGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp CCACTGAGCCACCAGTCTCCTGCTGGATCTTCAGCTGTAACTGAGTaGCTCGCCGCCGGGCACCTTCGATCTGCTCTTCCAGTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PLSHQSPAGSSAVTE*LAAGHLRSALPVGW
Trigger: CCAGCCTACTGGAAGAGCAGATCGAAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS TCA 90 bp GCTGGAGGGCTCTGGCCAACTAGCTGGTGGGGGTTGGGTGGGGAATaGCATCTGTCTCCGCATCCATCTCTCCTCAAGCACACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AGGLWPTSWWGLGGE*HLSPHPSLLKHTRK
Trigger: CTTCCTGGTGTGCTTGAGGAGAGATGGATGCGGAGACAGATGTCATTCCCCACCCAACCCCCACCAGCTAGTTGGCCAGAGCCCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 90 bp TCCCGCTGGGTTAGCCCAGCCACCACATCCTTGCCCACTGTATGCTaGCAATTTTGGGCATCTGGCTCTGGCTCCAGGTCAGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRWVSPATTSLPTVC*QFWASGSGSRSDSW
Trigger: CCAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGGGCTAACCCAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp CATGGCGCCAGCTGTTATCTGCCTATTCATCCATGGCAGCTGGCTTaGTTCAAACCAGCAGGCGTGGGTGGAGGGGAGCCACCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HGASCYLPIHPWQLA*FKPAGVGGGEPPLP
Trigger: AGGCAAGGGTGGCTCCCCTCCACCCACGCCTGCTGGTTTGAAGCAAGCCAGCTGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 90 bp CTTCCCAGCATGGGACTGCACACCACGCCAGAAGGATCGTTGTACTaGCCCACTGACCCCAAGGTGGTGACCTCAGGCACAGGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: LPSMGLHTTPEGSLY*PTDPKVVTSGTGEA
Trigger: AGCTTCACCTGTGCCTGAGGTCACCACCTTGGGGTCAGTGGGGCAGTACAACGATCCTTCTGGCGTGGTGTGCAGTCCCATGCTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp TGGGACCCAGTGCCTCCAGGCAGCTCCTCAGGTTCAGGTTCACCATaGAACACGTCTGAGTCATCCAGTTCTACCCTGCTGGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: WDPVPPGSSSGSGSP*NTSESSSSTLLGVG
Trigger: CCCCACACCCAGCAGGGTAGAACTGGATGACTCAGACGTGTTCCATGGTGAACCTGAACCTGAGGAGCTGCCTGGAGGCACTGGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 90 bp GCACAGGTGAAGCTGGAGGGCTCTGGCCAACTAGCTGGTGGGGGTTaGGTGGGGAATGACATCTGTCTCCGCATCCATCTCTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: AQVKLEGSGQLAGGG*VGNDICLRIHLSSS
Trigger: GCTTGAGGAGAGATGGATGCGGAGACAGATGTCATTCCCCACCCAACCCCCACCAGCTAGTTGGCCAGAGCCCTCCAGCTTCACCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGGGCTTCCCAATGTATTaGAGGATAGGGTTTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQGFPMY*RIGFRF
Trigger: GAAGCGAAACCCTATCCTCAAATACATTGGGAAGCC...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGTCCGGTCGAGAGTCGTaGTGTCCCAGGTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESGRES*CPRFWG
Trigger: GCCCCAGAACCTGGGACACAACGACTCTCGACCGGA...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCCAGCCACCACATCCTaGCCCACTGTATGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTPATTS*PTVCCQ
Trigger: TTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAACTGTGCAGCCACTaGCTGGAGTTCCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRELCSH*LEFLSG
Trigger: GCCCGAGAGGAACTCCAGCAAGTGGCTGCACAGTTC...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGAGCCCACAGCAGTCTaGCTGTGGCACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFEPTAV*LWHFSN
Trigger: ATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCTC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCTGAGTGGTCGGTGCTaGAGTCCGGGGGTCCTGATG +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALELSGRC*SPGVLM
Trigger: CATCAGGACCCCCGGACTCAAGCACCGACCACTCAG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAGGAGACATGAGGCCTaGGAGGGTTGGGCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVRRHEA*EGWAKG
Trigger: TCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp GAGCGGATGAGCACAGCATTGAGCTTGAGCACGGGGCTGAAGGTCTaGTTGCTGTCTGAGGAGCCCACAGCAGTCTTGCTGTGGCACTTC +
Preference number: 5 (lower is better)
Translates to: ERMSTALSLSTGLKV*LLSEEPTAVLLWHF
Trigger: GAAGTGCCACAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGTGCTCAAGCTCAATGCTGTGCTCATCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 90 bp TCTGGCTCCAGGTCAGACAGCTGGCCCAGATCATCCTCTAGGAGGTaGGGAAGGAGGGTATCTGTGCAGAACCCCAAACTGGGGGACTCA +
Preference number: 5 (lower is better)
Translates to: SGSRSDSWPRSSSRR*GRRVSVQNPKLGDS
Trigger: TGAGTCCCCCAGTTTGGGGTTCTGCACAGATACCCTCCTTCCCCACCTCCTAGAGGATGATCTGGGCCAGCTGTCTGACCTGGAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 90 bp ATCTTCCAGAGCGGAGTCAGCGAGCCCTTCCATGAACAGAGGGCCTaGGAAGGCCAAGTGGATGGGGTTCCTTGTCCTGATGCCCCTGTT +
Preference number: 5 (lower is better)
Translates to: IFQSGVSEPFHEQRA*EGQVDGVPCPDAPV
Trigger: AACAGGGGCATCAGGACAAGGAACCCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTGACTCCGCTCTGGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 90 bp GCAGGTTCTCCACTGGAGGGGAAACAGGGTGATGTCTTCCCAGCATaGGACTGCACACCACGCCAGAAGGATCGTTGTACTGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: AGSPLEGKQGDVFPA*DCTPRQKDRCTAPL
Trigger: CAGTGGGGCAGTACAACGATCCTTCTGGCGTGGTGTGCAGTCCCATGCTGGGAAGACATCACCCTGTTTCCCCTCCAGTGGAGAACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp ACCTGGCAGCAGGCTCCACAGGATCAGATGTCGCAGGTTCTCCACTaGAGGGGAAACAGGGTGATGTCTTCCCAGCATGGGACTGCACAC +
Preference number: 5 (lower is better)
Translates to: TWQQAPQDQMSQVLH*RGNRVMSSQHGTAH
Trigger: GTGTGCAGTCCCATGCTGGGAAGACATCACCCTGTTTCCCCTCCAGTGGAGAACCTGCGACATCTGATCCTGTGGAGCCTGCTGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTGGTGGGAAGGGGACTaGCGCTCTGGTGCAGAATCT +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRWWEGD*RSGAES
Trigger: AGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCTGGGTGGCATGTTTTaGAACTTCGGGATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFLGGMF*NFGILQ
Trigger: CTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGGGAATCCTTGGGGCTaGCCTGCTGATAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFGNPWG*PADKLL
Trigger: CAGAAGTTTATCAGCAGGCAAGCCCCAAGGATTCCC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGCTGCTTCTCAGCCACTaGGCGCTCTCGGAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: MQSACLGDMRPWRVGLRELLLSH*ALSERV
Trigger: GACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCAG...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGAATTGCTGCTCTTCTaGGTCTTAGGGAAGAACGGT +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRELLLF*VLGKNG
Trigger: ACCGTTCTTCCCTAAGACCAAGAAGAGCAGCAATTC...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAATAGGGTTTCGCTTCTaGTCCTCCAAGGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRIGFRF*SSKASF
Trigger: AAAGGATGCCTTGGAGGACAAGAAGCGAAACCCTAT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTGTATGCTGCCAATTTaGGGCATCTGGCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFCMLPI*GIWLWL
Trigger: GAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGCTCATTGATGACCTCTaGCCGGTCAATCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACALIDDL*PVNLPL
Trigger: CAGCGGGAGATTGACCGGCAAGAGGTCATCAATGAG...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTCTCATTGATGACCTCTaGCCGGTCAATCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTLIDDL*PVNLPL
Trigger: CAGCGGGAGATTGACCGGCAAGAGGTCATCAATGAG...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGAACTGTGCAGCCACTaGCTGGAGTTCCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEELCSH*LEFLSG
Trigger: GCCCGAGAGGAACTCCAGCAAGTGGCTGCACAGTTC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGTAAGATCCAGGCTCTaGAACTCTGCTGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGVRSRL*NSAARG
Trigger: CCCCCTGGCAGCAGAGTTCAAGAGCCTGGATCTTAC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTCCAAGGTCTTATCCTaGCTGATCCTCCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFSKVLS*LILQVR
Trigger: CCTGACCTGGAGGATCAGCAAGGATAAGACCTTGGA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTCTGCTGCCTCTGTGCTaGAAGCATCTTCAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFLLPLC*KHLQPD
Trigger: ATCTGGCTGAAGATGCTTCAAGCACAGAGGCAGCAG...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAGTGCAGGGACAACCTaGCTGCCTGCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALESAGTT*LPATSA
Trigger: AGCTGAGGTGGCAGGCAGCAAGGTTGTCCCTGCACT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAGCGGCTGGGGCGTCTaGGATCATCGTTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKSGWGV*DHRCLP
Trigger: AGGGAGGCAACGATGATCCAAGACGCCCCAGCCGCT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAAGAGGATTTGGTGGTTaGTACGGTTATGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LPCAPVSGQSLKEEWGRRRGFGG*YGYGPG
Trigger: ACCAGGACCATAACCGTACAAACCACCAAATCCTCT...TCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAGGAGACATGAGGCCTaGGAGGGTTGGGCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRRRHEA*EGWAKG
Trigger: TCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGGAGTTAGTTCTGCTGTaGGGCTCCTCCACATCCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACAELVLL*GSSTSR
Trigger: CCTGGATGTGGAGGAGCCCAACAGCAGAACTAACTC...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp GTCGTGCCTCTCGAAGACGGATCCCAGCATGGCTCATGTAGGTATTaGGGGCGAAGTCCATGGGGGCGCTCCTGTCTTCCTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: VVPLEDGSQHGSCRY*GRSPWGRSCLPHTW
Trigger: CCAAGTATGAGGAAGACAGGAGCGCCCCCATGGACTTCGCCCTCAATACCTACATGAGCCATGCTGGGATCCGTCTTCGAGAGGCACGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS TCA 90 bp GCACGTTCTCTGCCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTTaGGGCTTTCAGAGCGGCCCAGGCGAATCTCTGAGCGTGAACTGT +
Preference number: 5 (lower is better)
Translates to: ARSLPFETVSSLPGP*GFQSGPGESLSVNC
Trigger: ACAGTTCACGCTCAGAGATTCGCCTGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAGAGAACGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp ATGTCCACTGAGCCACCAGTCTCCTGCTGGATCTTCAGCTGTAACTaGGTGACTCGCCGCCGGGCACCTTCGATCTGCTCTTCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: MSTEPPVSCWIFSCN*VTRRRAPSICSSSR
Trigger: CCTACTGGAAGAGCAGATCGAAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTCAGTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS TCA 90 bp CACAGGATCAGATGTCGCAGGTTCTCCACTGGAGGGGAAACAGGGTaGTGTCTTCCCAGCATGGGACTGCACACCACGCCAGAAGGATCG +
Preference number: 5 (lower is better)
Translates to: HRIRCRRFSTGGETG*CLPSMGLHTTPEGS
Trigger: CGATCCTTCTGGCGTGGTGTGCAGTCCCATGCTGGGAAGACATCACCCTGTTTCCCCTCCAGTGGAGAACCTGCGACATCTGATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 90 bp TTGAGAATCTCCCGGCACTGGTCCCGGGCCCGGCACAGCTTCTCATaGTCAGAGGTGCCACCTACCAAAATGGACAGAAGAGATGGTTGG +
Preference number: 5 (lower is better)
Translates to: LRISRHWSRARHSFS*SEVPPTKMDRRDGW
Trigger: CCAACCATCTCTTCTGTCCATTTTGGTAGGTGGCACCTCTGAGCATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp GTTAGCCCAGCCACCACATCCTTGCCCACTGTATGCTGCCAATTTTaGGCATCTGGCTCTGGCTCCAGGTCAGACAGCTGGCCCAGATCA +
Preference number: 5 (lower is better)
Translates to: VSPATTSLPTVCCQF*ASGSGSRSDSWPRS
Trigger: TGATCTGGGCCAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGGGCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTACCCTGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAATCCGAAATGGCACTaGGAAAAATTCTTTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PTLCPGLRPVPEGGVGTQNPKWH*EKFFRL
Trigger: CAGCCGAAAGAATTTTTCCAAGTGCCATTTCGGATT...CTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACAGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTGTTGAACGAGACCTGTaGTCTCAGAGGCATCCGAAG +
Preference number: 5 (lower is better)
Translates to: GQEHSGLAPALGSILELGVERDL*SQRHPK
Trigger: CTTCGGATGCCTCTGAGACAACAGGTCTCGTTCAAC...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCCAGGTGTGAGCTATaGGTCACCATGGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRSRCEL*VTMVPL
Trigger: CAACGGCACCATGGTGACCAATAGCTCACACCTGGA...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCAGGCATGGCTGCCTCTaGAGCTTCACAGAGAACACC +
Preference number: 5 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRRHGCL*SFTENT
Trigger: GGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTGGTAGCCACTTGTCCTaGTCAGGAGCAGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTGSHLS*SGADWA
Trigger: GGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACC...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAAGAACGGTAGCCACTaGTCCTTGTCAGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVKNGSH*SLSGAD
Trigger: GTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGCTCACATTGCCTGGTTaGACTTCCACAGGGGACAAG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACALTLPG*TSTGDK
Trigger: CTTGTCCCCTGTGGAAGTCAAACCAGGCAATGTGAG...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAGGTCACTGATCTCTTaGATGATGGGGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACARSLIS*MMGPSS
Trigger: GGAGGAAGGCCCCATCATCAAAGAGATCAGTGACCT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTGGGGTGGGCCCAGCTaGGAGGTGCAGATGATGAAG +
Preference number: 5 (lower is better)
Translates to: MQSACLGDMRPWRVGLREWGGPS*EVQMMK
Trigger: CTTCATCATCTGCACCTCCAAGCTGGGCCCACCCCA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGAGGATGGACGGGCATaGGGGCAGCTCCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVEDGRA*GQLRGA
Trigger: GGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCTC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGGGGACGCAGAGGATTaGGTGGTTTGTACGGTTATG +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVGDAED*VVCTVM
Trigger: CATAACCGTACAAACCACCAAATCCTCTGCGTCCCC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp TTGTCTCAGAGGCATCCGAAGGCTGGCGATGGTGGGAAGGGGACTTaGGCTCTGGTGCAGAATCTCCCAGAGAAGACAGGCTACTTAACC +
Preference number: 5 (lower is better)
Translates to: LSQRHPKAGDGGKGT*ALVQNLPEKTGYLT
Trigger: GGTTAAGTAGCCTGTCTTCTCTGGGAGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTCTGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp CTGTCTTCCTCATACTTGGACAAAATATCTCCAAGGGCAGCCAGCTaGTTCTCAGCCACTTGGCGCTCTCGGAGAGGGTCCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSSYLDKISPRAAS*FSATWRSRRGSPSR
Trigger: CCTGGATGGGGACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCAGCTGGCTGCCCTTGGAGATATTTTGTCCAAGTATGAGGAAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS GCA 90 bp AGCAGCATCCATGTCAACATCACTGCGAGAGCGGGGCACGTTCTCTaGCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTTGAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSIHVNITARAGHVL*LSRPFHLFPALEAF
Trigger: GAAAGCCTCAAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAGAGAACGTGCCCCGCTCTCGCAGTGATGTTGACATGGATGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp TGGGCCAGCTCCATATCCTTGAGCCTGTTGAGCTTGAGAGTGAGCTaGTCAATGGTATGGAAGATCATGCCCACGTCCCTGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WASSISLSLLSLRVS*SMVWKIMPTSLRAR
Trigger: CCTGGCCCTCAGGGACGTGGGCATGATCTTCCATACCATTGAGCAGCTCACTCTCAAGCTCAACAGGCTCAAGGATATGGAGCTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS GCA 90 bp TTGGGGCTCCTGCCTGAGAAGTCCAACATGGCGCCAGCTGTTATCTaGCTATTCATCCATGGCAGCTGGCTTGCTTCAAACCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LGLLPEKSNMAPAVI*LFIHGSWLASNQQA
Trigger: CGCCTGCTGGTTTGAAGCAAGCCAGCTGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp TTGGACAAAATATCTCCAAGGGCAGCCAGCTGCTTCTCAGCCACTTaGCGCTCTCGGAGAGGGTCCCCATCCAGGTCCAGCAGGTCATTT +
Preference number: 5 (lower is better)
Translates to: LDKISPRAASCFSAT*RSRRGSPSRSSRSF
Trigger: AAATGACCTGCTGGACCTGGATGGGGACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCAGCTGGCTGCCCTTGGAGATATTTTGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 90 bp GCCACTTGTCCTTGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTTaGAAGGTCGTGCCTCTCGAAGACGGATCCCAGCATGGCTCATGT +
Preference number: 5 (lower is better)
Translates to: ATCPCQEQTGPFQLC*KVVPLEDGSQHGSC
Trigger: ACATGAGCCATGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 90 bp GTTTGTTTTACCGCTTCATTCACATACTTGAGAATCTCCCGGCACTaGTCCCGGGCCCGGCACAGCTTCTCATGCTCAGAGGTGCCACCC +
Preference number: 5 (lower is better)
Translates to: VCFTASFTYLRISRH*SRARHSFSCSEVPP
Trigger: GGGTGGCACCTCTGAGCATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 90 bp CCTTCCTCCCTGGGCTCATCTATTGGCCTCCCTGTGAGCTTGTCTTaGCTTTTCTTGTCTCAAGGCCGTCCATGGTGTTTCCCAACCCGG +
Preference number: 5 (lower is better)
Translates to: PSSLGSSIGLPVSLS*LFLSQGRPWCFPTR
Trigger: CCGGGTTGGGAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAGGGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGTGGTGGGAAGGGGACTaGCGCTCTGGTGCAGAATCT +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKWWEGD*RSGAES
Trigger: AGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCA...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGCCATGCTGGTCCTTTaGGATAATGACACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVAMLVL*DNDTAL
Trigger: CAACGCTGTGTCATTATCCAAAAGGACCAGCATGGC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTGCCATGCTGGTCCTTTaGGATAATGACACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: GQEHSGLAPALGSILELGAMLVL*DNDTAL
Trigger: CAACGCTGTGTCATTATCCAAAAGGACCAGCATGGC...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGAGGCATGGCTGCCTCTaGAGCTTCACAGAGAACACC +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALERHGCL*SFTENT
Trigger: GGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCT...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCCTTTTCAGCTGTGTaGGAAGGTCGTGCCTCTCGA +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEAFSAV*EGRASR
Trigger: TCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGGCTTCCCAATGTATTaGAGGATAGGGTTTCGCTTC +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFGFPMY*RIGFRF
Trigger: GAAGCGAAACCCTATCCTCAAATACATTGGGAAGCC...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGTATGCTGCCAATTTaGGGCATCTGGCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGCMLPI*GIWLWL
Trigger: GAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGCTCTCCTTGCGTTGCTaGGTCTTGATTAGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVLSLRC*VLISSR
Trigger: CCTAGAGCTAATCAAGACCAAGCAACGCAAGGAGAG...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTTGGAATCGACTCTCCTaGCGTTGCTTGGTCTTGATT +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFWNRLS*RCLVLI
Trigger: AATCAAGACCAAGCAACGCAAGGAGAGTCGATTCCA...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGGCTTCATTCACATACTaGAGAATCTCCCGGCACTGG +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVASFTY*RISRHW
Trigger: CCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGC...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTCTGCTGCCAGGGGGTaGCTGGCCCTCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPSAARG*LALSRA
Trigger: CGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAGA...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTCAGAATTTCTGGTCCTaGGGGGTAGGTGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGQNFWS*GVGVPE
Trigger: CTCTGGAACACCTACCCCCAAGGACCAGAAATTCTG...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGATATCCTTGAGCCTGTaGAGCTTGAGAGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACAISLSL*SLRVSC
Trigger: GCAGCTCACTCTCAAGCTCAACAGGCTCAAGGATAT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTGCCAGCTCCATATCCTaGAGCCTGTTGAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGASSIS*SLLSLR
Trigger: TCTCAAGCTCAACAGGCTCAAGGATATGGAGCTGGC...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAAACCTGACTCCGACTaGAGCAGACCAAGCAACATG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACAKPDSD*SRPSNM
Trigger: CATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGATTCATCAGGGAGAGTaGGGTGAGGACGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRIHQGE*GEDVVM
Trigger: CATCACCACGTCCTCACCCAACTCTCCCTGATGAAT...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS CCA 90 bp TGCGCTTCGTTCTGTAGTCGTGGATCTGCTCTTGGATCTCAGGCATaGCTGCCTCTTGAGCTTCACAGAGAACACCACGGGCATCTTCGC +
Preference number: 5 (lower is better)
Translates to: CASFCSRGSALGSQA*LPLELHREHHGHLR
Trigger: GCGAAGATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGACTACAGAACGAAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 90 bp GTCTTAGGGAAGAACGGTAGCCACTTGTCCTTGTCAGGAGCAGACTaGGCCTTTTCAGCTGTGTTGGAAGGTCGTGCCTCTCGAAGACGG +
Preference number: 5 (lower is better)
Translates to: VLGKNGSHLSLSGAD*AFSAVLEGRASRRR
Trigger: CCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTTCCCTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 90 bp GTCACAAACAGCTCATTGATGACCTCTTGCCGGTCAATCTCCCGCTaGGTTAGCCCAGCCACCACATCCTTGCCCACTGTATGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: VTNSSLMTSCRSISR*VSPATTSLPTVCCQ
Trigger: TTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGGGCTAACCCAGCGGGAGATTGACCGGCAAGAGGTCATCAATGAGCTGTTTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 90 bp GTTTGTTTTACCGCTTCATTCACATACTTGAGAATCTCCCGGCACTaGTCCCGGGCCCGGCACAGCTTCTCATGCTCAGAGGTGCCACCT +
Preference number: 5 (lower is better)
Translates to: VCFTASFTYLRISRH*SRARHSFSCSEVPP
Trigger: AGGTGGCACCTCTGAGCATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGAATCGCTTGCAATTTTaGAGCAAGGTGAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACANRLQF*SKVRGG
Trigger: CCCTCCTCTCACCTTGCTCAAAAATTGCAAGCGATT...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGATGGTGCCGTTGACTTaGATGATCCGGTCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: MQSACLGDMRPWRVGLREMVPLT*MIRSPS
Trigger: AGAGGGCGACCGGATCATCAAAGTCAACGGCACCAT...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGGGGCCAATGCTGCGGTGGCCCCTTGGATGGTCCTGGGTGAATTCAGGGACTATAGGGTTTCGCTTCTaGTCCTCCAAGGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: MGPMLRWPLGWSWVNSGTIGFRF*SSKASF
Trigger: AAAGGATGCCTTGGAGGACAAGAAGCGAAACCCTAT...AGTCCCTGAATTCACCCAGGACCATCCAAGGGGCCACCGCAGCATTGGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGCTCTCCTTGCGTTGCTaGGTCTTGATTAGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRLSLRC*VLISSR
Trigger: CCTAGAGCTAATCAAGACCAAGCAACGCAAGGAGAG...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTGGAATCGACTCTCCTaGCGTTGCTTGGTCTTGATT +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVWNRLS*RCLVLI
Trigger: AATCAAGACCAAGCAACGCAAGGAGAGTCGATTCCA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGCTTCATTCACATACTaGAGAATCTCCCGGCACTGG +
Preference number: 5 (lower is better)
Translates to: VGAFRMQSACLGDMRPWRASFTY*RISRHW
Trigger: CCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGC...CCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGTGGGGAAGAGAGCCCACAGCAGTCTaGCTGTGGCACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SSAPYLLHWFSTGTGWGREPTAV*LWHFSN
Trigger: ATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCTC...TCTTCCCCACCCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCCTGCAAGCTGGGTGTaGTCCCCTTCACCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMPASWV*SPSPPG
Trigger: CCCTGGGGGTGAAGGGGACAACACCCAGCTTGCAGG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCCCTGCAAGCTGGGTGTaGTCCCCTTCACCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVPASWV*SPSPPG
Trigger: CCCTGGGGGTGAAGGGGACAACACCCAGCTTGCAGG...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGCAGAATTTCTGGTCCTaGGGGGTAGGTGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEQNFWS*GVGVPE
Trigger: CTCTGGAACACCTACCCCCAAGGACCAGAAATTCTG...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGAGTGCAGGGACAACCTaGCTGCCTGCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSAGTT*LPATSA
Trigger: AGCTGAGGTGGCAGGCAGCAAGGTTGTCCCTGCACT...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCATATCCTTGAGCCTGTaGAGCTTGAGAGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRISLSL*SLRVSC
Trigger: GCAGCTCACTCTCAAGCTCAACAGGCTCAAGGATAT...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp AACGGTGGCGGTTCTCTGTTTGTTTTACCGCTTCATTCACATACTTaGGAATCTCCCGGCACTGGTCCCGGGCCCGGCACAGCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: NGGGSLFVLPLHSHT*ESPGTGPGPGTASH
Trigger: ATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAACAGAGAACCGCCACCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS GCA 90 bp CTTGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTTGGAAGGTCGTaGCTCTCGAAGACGGATCCCAGCATGGCTCATGTAGGTATTGAG +
Preference number: 5 (lower is better)
Translates to: LVRSRLGLFSCVGRS*LSKTDPSMAHVGIE
Trigger: CTCAATACCTACATGAGCCATGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS GCA 90 bp GTGGCAGAGCTAAGCTCTGAATCTCGAATGTCCAACTCCAAAGCCTaGCTGATATCGGCGTTGTCTCCTTCTTCCAGGACCCAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: VAELSSESRMSNSKA*LISALSPSSRTQRR
Trigger: CCTACGCTGGGTCCTGGAAGAAGGAGACAACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGAGCTTAGCTCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp ATATCCTTGAGCCTGTTGAGCTTGAGAGTGAGCTGCTCAATGGTATaGAAGATCATGCCCACGTCCCTGAGGGCCAGGCTTGGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: ISLSLLSLRVSCSMV*KIMPTSLRARLGGE
Trigger: CTCTCCTCCAAGCCTGGCCCTCAGGGACGTGGGCATGATCTTCCATACCATTGAGCAGCTCACTCTCAAGCTCAACAGGCTCAAGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 90 bp ATGGACAGAAGAGATGGTTGGGGCTCCTGCCTGAGAAGTCCAACATaGCGCCAGCTGTTATCTGCCTATTCATCCATGGCAGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: MDRRDGWGSCLRSPT*RQLLSAYSSMAAGL
Trigger: CAAGCCAGCTGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCTTCTGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp CTTCTCATGCTCAGAGGTGCCACCTACCAAAATGGACAGAAGAGATaGTTGGGGCTCCTGCCTGAGAAGTCCAACATGGCGCCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLMLRGATYQNGQKR*LGLLPEKSNMAPAV
Trigger: AACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCTTCTGTCCATTTTGGTAGGTGGCACCTCTGAGCATGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGAGGGCCTCCCAACTaGAAGATAGAATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEGGPPN*KIESFL
Trigger: GAGAAAGGATTCTATCTTCAAGTTGGGAGGCCCTCC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGTTGAACGAGACCTGTaGTCTCAGAGGCATCCGAAG +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKVERDL*SQRHPK
Trigger: CTTCGGATGCCTCTGAGACAACAGGTCTCGTTCAAC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGGGGCCCAGTCCTCAGCTCCGTACCTGCTTCACTGGTTTTCTACAGGGACAGGGATAATGACACAGCGTaGAACGAGACCTGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: WGPVLSSVPASLVFYRDRDNDTA*NETCCL
Trigger: GAGACAACAGGTCTCGTTCAACGCTGTGTCATTATC...CCTGTCCCTGTAGAAAACCAGTGAAGCAGGTACGGAGCTGAGGACTGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGGAATCCTTGGGGCTaGCCTGCTGATAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKGNPWG*PADKLL
Trigger: CAGAAGTTTATCAGCAGGCAAGCCCCAAGGATTCCC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGTGGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGTCACAAACAGCTCATaGATGACCTCTTGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: SGGLSDAVSMLRRHEALEVTNSS*MTSCRS
Trigger: TGACCGGCAAGAGGTCATCAATGAGCTGTTTGTGAC...CTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGACAGGAACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTTGCGTTGCTTGGTCTaGATTAGCTCTAGGGCTATT +
Preference number: 5 (lower is better)
Translates to: GQEHSGLAPALGSILELGLRCLV*ISSRAI
Trigger: AATAGCCCTAGAGCTAATCAAGACCAAGCAACGCAA...ACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGTTCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCTCCCCCAAGGGACTaGAGCAGCTCTCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVSPPRD*SSSLWA
Trigger: GGCCCACAGAGAGCTGCTCAAGTCCCTTGGGGGAGA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp CTTCGTTCTGTAGTCGTGGATCTGCTCTTGGATCTCAGGCATGGCTaGCTCTTGAGCTTCACAGAGAACACCACGGGCATCTTCGCTGTT +
Preference number: 5 (lower is better)
Translates to: LRSVVVDLLLDLRHG*LLSFTENTTGIFAV
Trigger: AACAGCGAAGATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGACTACAGAACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS GCA 90 bp GAGGTGCCACCTACCAAAATGGACAGAAGAGATGGTTGGGGCTCCTaGCTGAGAAGTCCAACATGGCGCCAGCTGTTATCTGCCTATTCA +
Preference number: 5 (lower is better)
Translates to: EVPPTKMDRRDGWGS*LRSPTWRQLLSAYS
Trigger: TGAATAGGCAGATAACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCTTCTGTCCATTTTGGTAGGTGGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp TCATGCTCAGAGGTGCCACCTACCAAAATGGACAGAAGAGATGGTTaGGGCTCCTGCCTGAGAAGTCCAACATGGCGCCAGCTGTTATCT +
Preference number: 5 (lower is better)
Translates to: SCSEVPPTKMDRRDG*GSCLRSPTWRQLLS
Trigger: AGATAACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCTTCTGTCCATTTTGGTAGGTGGCACCTCTGAGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGAATCCGAAATGGCACTaGGAAAAATTCTTTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVNPKWH*EKFFRL
Trigger: CAGCCGAAAGAATTTTTCCAAGTGCCATTTCGGATT...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTAGCTTTGGTGTCTaGATCAGGATTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: SLLLSLACLRAAHIQACACSFGV*IRIESL
Trigger: AAGCGATTCAATCCTGATCAAGACACCAAAGCTACA...CGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGTCCAGGTGTGAGCTATaGGTCACCATGGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRSRCEL*VTMVPL
Trigger: CAACGGCACCATGGTGACCAATAGCTCACACCTGGA...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTCTGCTTCTCAGCCACTaGGCGCTCTCGGAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPLLLSH*ALSERV
Trigger: GACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCAG...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp CCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCGTGTTAGCTCTAGGGCTATaGACTGATAGGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: PPPFTCMSEGSAHTGVRVLALGL*TDRNRT
Trigger: AGTTCTGTTCCTATCAGTCAATAGCCCTAGAGCTAA...CACGCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTTGCGTTGCTTGGTCTaGATTAGCTCTAGGGCTATT +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGLRCLV*ISSRAI
Trigger: AATAGCCCTAGAGCTAATCAAGACCAAGCAACGCAA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGGGCTGAAGGTCTGCTaGCTGTCTGAGGAGCCCACA +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMGLKVC*LSEEPT
Trigger: TGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTTGAGCCTGTTGAGCTaGAGAGTGAGCTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: MQSACLGDMRPWRVGLRELSLLS*RVSCSM
Trigger: CATTGAGCAGCTCACTCTCAAGCTCAACAGGCTCAA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AAGCCTCCTCCTTTCACTTGCATGTCTGAGGGCAGCGCACATACAGGCGTGCGCTCAGGATTGAATCGCTaGCAATTTTTGAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: KPPPFTCMSEGSAHTGVRSGLNR*QFLSKV
Trigger: CACCTTGCTCAAAAATTGCAAGCGATTCAATCCTGA...GCGCACGCCTGTATGTGCGCTGCCCTCAGACATGCAAGTGAAAGGAGGAGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGGATGGTCCTGGGTGAATTCAGGGACTCGGCATTCAGACCCCTGTCCCCACCTTCAGGATTGAATCGCTaGCAATTTTTGAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: WMVLGEFRDSAFRPLSPPSGLNR*QFLSKV
Trigger: CACCTTGCTCAAAAATTGCAAGCGATTCAATCCTGA...AGGTGGGGACAGGGGTCTGAATGCCGAGTCCCTGAATTCACCCAGGACCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp GGGGGCCTTTCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGTAGCTTTGGTGTCTaGATCAGGATTGAATCGCTT +
Preference number: 5 (lower is better)
Translates to: GGLSDAVSMLRRHEALEGCSFGV*IRIESL
Trigger: AAGCGATTCAATCCTGATCAAGACACCAAAGCTACA...ACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGAAAGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGATAATGACACAGCGTaGAACGAGACCTGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKDNDTA*NETCCL
Trigger: GAGACAACAGGTCTCGTTCAACGCTGTGTCATTATC...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp TGTGCCCCGGTCTCAGGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTAATATGAAATGTGCTTaGAGAAGAGCTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: CAPVSGQSLKEEWGRRGFNMKCA*RRAFGL
Trigger: AAGCCCAAAAGCTCTTCTCAAAGCACATTTCATATT...AAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCCTGAGACCGGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCCAGCCACCACATCCTaGCCCACTGTATGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMPATTS*PTVCCQ
Trigger: TTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp TGCGACATAGGCGCCAGATTTGATCAGCTTTACCACTTCCAGGTGTaGGCTATTGGTCACCATGGTGCCGTTGACTTTGATGATCCGGTC +
Preference number: 5 (lower is better)
Translates to: CDIGARFDQLYHFQV*AIGHHGAVDFDDPV
Trigger: GACCGGATCATCAAAGTCAACGGCACCATGGTGACCAATAGCTCACACCTGGAAGTGGTAAAGCTGATCAAATCTGGCGCCTATGTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp TCTTCCTGCCTCAGCATATTCCTGAGGATCTGGGTGGCATGTTTTTaGACTTCGGGATCCTGCAGAGGTTTGGGTCCTGTGATGCGTTGT +
Preference number: 5 (lower is better)
Translates to: SSCLSIFLRIWVACF*TSGSCRGLGPVMRC
Trigger: ACAACGCATCACAGGACCCAAACCTCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGGCAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 90 bp AGACAGATCACTGCTTTGAAGACGCTGATAGCTCCTGGGAATCCCTaGCTCTACTACAACCAGCTCTACAGATGCAAGGGACAGAGACTG +
Preference number: 5 (lower is better)
Translates to: RQITALKTLIAPGNP*LYYNQLYRCKGQRL
Trigger: CAGTCTCTGTCCCTTGCATCTGTAGAGCTGGTTGTAGTAGAGGCAGGGATTCCCAGGAGCTATCAGCGTCTTCAAAGCAGTGATCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp GTCCTCAGGAAAGCTTCCGGTCGAGAGTCGTTGTGTCCCAGGTTCTaGGGCATCATACTGCTGGTTGTTCTCAAAGTGCTGAATGATGTT +
Preference number: 5 (lower is better)
Translates to: VLRKASGRESLCPRF*GIILLVVLKVLNDV
Trigger: AACATCATTCAGCACTTTGAGAACAACCAGCAGTATGATGCCCCAGAACCTGGGACACAACGACTCTCGACCGGAAGCTTTCCTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 90 bp CCAGATTCCTGTCCAGTTCTGGAGACTCCCATATCCCAGAATTTCTaGTCCTTGGGGGTAGGTGTTCCAGAGAACAGAGACCCATGTCTT +
Preference number: 5 (lower is better)
Translates to: PDSCPVLETPISQNF*SLGVGVPENRDPCL
Trigger: AAGACATGGGTCTCTGTTCTCTGGAACACCTACCCCCAAGGACCAGAAATTCTGGGATATGGGAGTCTCCAGAACTGGACAGGAATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 90 bp TTCAGGTCTCAGACAGATCACTGCTTTGAAGACGCTGATAGCTCCTaGGAATCCCTGCCTCTACTACAACCAGCTCTACAGATGCAAGGG +
Preference number: 5 (lower is better)
Translates to: FRSQTDHCFEDADSS*ESLPLLQPALQMQG
Trigger: CCCTTGCATCTGTAGAGCTGGTTGTAGTAGAGGCAGGGATTCCCAGGAGCTATCAGCGTCTTCAAAGCAGTGATCTGTCTGAGACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGGAGGGCCTCCCAACTaGAAGATAGAATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRGGPPN*KIESFL
Trigger: GAGAAAGGATTCTATCTTCAAGTTGGGAGGCCCTCC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp CTCGATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCGTCGTGGATCTGCTCTaGGATCTCAGGCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LDPGTGLLTKEIQVKPLFVVDLL*DLRHGC
Trigger: GCAGCCATGCCTGAGATCCAAGAGCAGATCCACGAC...GAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCGCCTTTTCAGCTGTGTaGGAAGGTCGTGCCTCTCGA +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVAFSAV*EGRASR
Trigger: TCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGC...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTGTAAGATCCAGGCTCTaGAACTCTGCTGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPVRSRL*NSAARG
Trigger: CCCCCTGGCAGCAGAGTTCAAGAGCCTGGATCTTAC...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp ATCAGATTGGGGTTCCTAACACCTCTCTGTCCTGACTCCAATGTCTaGAATTTGGGGGTAGTGAAAGATGCCCAGGATCCCAGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: IRLGFLTPLCPDSNV*NLGVVKDAQDPRES
Trigger: ACTCTCCCTGGGATCCTGGGCATCTTTCACTACCCCCAAATTTCAGACATTGGAGTCAGGACAGAGAGGTGTTAGGAACCCCAATCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 90 bp CCCTTGCCTCACATGAGGACCCCAAGTGGTAAGGGTAACTTTTACTaGGCATCTTCAGGTCTCAGACAGATCACTGCTTTGAAGACGCTG +
Preference number: 5 (lower is better)
Translates to: PLPHMRTPSGKGNFY*ASSGLRQITALKTL
Trigger: CAGCGTCTTCAAAGCAGTGATCTGTCTGAGACCTGAAGATGCTCAGTAAAAGTTACCCTTACCACTTGGGGTCCTCATGTGAGGCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCAAGAACGGTAGCCACTaGTCCTTGTCAGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVKNGSH*SLSGAD
Trigger: GTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCAGGTCACTGATCTCTTaGATGATGGGGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVRSLIS*MMGPSS
Trigger: GGAGGAAGGCCCCATCATCAAAGAGATCAGTGACCT...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGCTGCTGCCTCTGTGCTaGAAGCATCTTCAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMLLPLC*KHLQPD
Trigger: ATCTGGCTGAAGATGCTTCAAGCACAGAGGCAGCAG...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp CCACAACAGAAAAAGGACGAAGACACCAAAGACCACAAGGCACAGTaGCTTGCTAAGGTCACAAAGCAGTGTCAGAATGAGGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PQQKKDEDTKDHKAQ*LAKVTKQCQNEGLA
Trigger: TGCCAGACCCTCATTCTGACACTGCTTTGTGACCTTAGCAAGTCACTGTGCCTTGTGGTCTTTGGTGTCTTCGTCCTTTTTCTGTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461678.1
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTCCAAGGTCTTATCCTaGCTGATCCTCCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPSKVLS*LILQVR
Trigger: CCTGACCTGGAGGATCAGCAAGGATAAGACCTTGGA...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTTGAGCCTGTTGAGCTaGAGAGTGAGCTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMLSLLS*RVSCSM
Trigger: CATTGAGCAGCTCACTCTCAAGCTCAACAGGCTCAA...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 90 bp ACAGGCTACTTAACCTGTCTATACTCTGGGGTAACCTTACACTCATaGTTTCTCGGTGTCTCCACGGTTCCAGAATCCTGTAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: TGYLTCLYSGVTLHS*FLGVSTVPESCSFG
Trigger: ACCAAAGCTACAGGATTCTGGAACCGTGGAGACACCGAGAAACCATGAGTGTAAGGTTACCCCAGAGTATAGACAGGTTAAGTAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGAGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGGAATTGCTGCTCTTCTaGGTCTTAGGGAAGAACGGT +
Preference number: 5 (lower is better)
Translates to: RGEEESAFTQKPPPFTCMELLLF*VLGKNG
Trigger: ACCGTTCTTCCCTAAGACCAAGAAGAGCAGCAATTC...CATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGGGAGTTTTCTTTCTTGGAATaGCTGCTCTTCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: MQSACLGDMRPWRVGLREFSFLE*LLFLVL
Trigger: TAAGACCAAGAAGAGCAGCAATTCCAAGAAAGAAAA...CTCCCTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp ACACTCAGGCCTGGCTCCCGCTTTAGGCTCGATCCTGGAACTGGGTTGTTAACTTTTTCTTTCTTGGAATaGCTGCTCTTCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: TLRPGSRFRLDPGTGLLTFSFLE*LLFLVL
Trigger: TAAGACCAAGAAGAGCAGCAATTCCAAGAAAGAAAA...AGTTAACAACCCAGTTCCAGGATCGAGCCTAAAGCGGGAGCCAGGCCTGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS-3UTR CAA 90 bp TCGGATGCAGTCAGCATGCTTAGGAGACATGAGGCCTTGGAGGGTTGGGCTAAGAATATGAAATGTGCTTaGAGAAGAGCTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SDAVSMLRRHEALEGWAKNMKCA*RRAFGL
Trigger: AAGCCCAAAAGCTCTTCTCAAAGCACATTTCATATT...CTTAGCCCAACCCTCCAAGGCCTCATGTCTCCTAAGCATGCTGACTGCATCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp AGGGAAAAGACACTGAAACCTGACTCCGACTTGAGCAGACCAAGCAACATGCGGGATCCTGGAACTGGGTaGTTAACTAAGGAGATACAA +
Preference number: 5 (lower is better)
Translates to: REKTLKPDSDLSRPSNMRDPGTG*LTKEIQ
Trigger: TTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC...CCGCATGTTGCTTGGTCTGCTCAAGTCGGAGTCAGGTTTCAGTGTCTTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp TTCTCGGTGTCTCCACGGTTCCAGAATCCTGTAGCTTTGGTGTCTTaGTCAGGATTGAATCGCTTGCAATTTTTGAGCAAGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: FSVSPRFQNPVALVS*SGLNRLQFLSKVRG
Trigger: TCCTCTCACCTTGCTCAAAAATTGCAAGCGATTCAATCCTGATCAAGACACCAAAGCTACAGGATTCTGGAACCGTGGAGACACCGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 90 bp AAAGCCTGTTCAAATCAGATTGGGGTTCCTAACACCTCTCTGTCCTaGCTCCAATGTCTGAAATTTGGGGGTAGTGAAAGATGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: KACSNQIGVPNTSLS*LQCLKFGGSERCPG
Trigger: TCCTGGGCATCTTTCACTACCCCCAAATTTCAGACATTGGAGTCAGGACAGAGAGGTGTTAGGAACCCCAATCTGATTTGAACAGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTCCATCCATGTGTTCTaGTCTGATGACGTCAATGCA +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVSIHVF*SDDVNA
Trigger: TGCATTGACGTCATCAGACAAGAACACATGGATGGA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTAGAGGATTTGGTGGTTaGTACGGTTATGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPRGFGG*YGYGPG
Trigger: ACCAGGACCATAACCGTACAAACCACCAAATCCTCT...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp GAAGTATGTCCTGTAATTCTTTTTCTTCCTGCCTCAGCATATTCCTaGGGATCTGGGTGGCATGTTTTTGAACTTCGGGATCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: EVCPVILFLPASAYS*GSGWHVFELRDPAE
Trigger: CTCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGGCAGGAAGAAAAAGAATTACAGGACATACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361409.2
CDS-3UTR CAA 90 bp AGGGGAGGAAGAAAGTGCATTTACACAGAAGCCTCCTCCTTTCACTTGCATGTCTTAGCTCTAGGGCTATaGACTGATAGGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: RGGRKCIYTEASSFHLHVLALGL*TDRNRT
Trigger: AGTTCTGTTCCTATCAGTCAATAGCCCTAGAGCTAA...GACATGCAAGTGAAAGGAGGAGGCTTCTGTGTAAATGCACTTTCTTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS-3UTR CAA 90 bp GATCCTGGAACTGGGTTGTTAACTAAGGAGATACAAGTGAAACCCCTCTTCCCTTCCATCCATGTGTTCTaGTCTGATGACGTCAATGCA +
Preference number: 5 (lower is better)
Translates to: DPGTGLLTKEIQVKPLFPSIHVF*SDDVNA
Trigger: TGCATTGACGTCATCAGACAAGAACACATGGATGGA...AGGGAAGAGGGGTTTCACTTGTATCTCCTTAGTTAACAACCCAGTTCCAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp ATTTTGTCTAAAGCCACACAGATATTAAGTGGCAGAGCTAAGCTCTaGATCTCGAATGTCCAACTCCAAAGCCTGCCTGATATCGGCGTT +
Preference number: 5 (lower is better)
Translates to: ILSKATQILSGRAKL*ISNVQLQSLPDIGV
Trigger: AACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGAGCTTAGCTCTGCCACTTAATATCTGTGTGGCTTTAGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 90 bp CCCTTATTATTCGTTCGGATTATTATTGTGGATTTGAGTTCGAGGTaGGTTTTTCTTCCACACCAGACTCCTGGAAAATCCGATCGCCTG +
Preference number: 5 (lower is better)
Translates to: PLLFVRIIIVDLSSR*VFLPHQTPGKSDRL
Trigger: CAGGCGATCGGATTTTCCAGGAGTCTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATCCACAATAATAATCCGAACGAATAATAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 90 bp GAAAGACGGCTCCCTTATTATTCGTTCGGATTATTATTGTGGATTTaGGTTCGAGGTGGGTTTTTCTTCCACACCAGACTCCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: ERRLPYYSFGLLLWI*VRGGFFFHTRLLEN
Trigger: ATTTTCCAGGAGTCTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATCCACAATAATAATCCGAACGAATAATAAGGGAGCCGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS GCA 90 bp GTACTGGTAGTTGGTTTGTGCCAGGCAGAAAGAAATGTCCTTATGTaGTATAAAACAAAGTTCAGAGATGATTCAGAATTTTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: VLVVGLCQAERNVLM*YKTKFRDDSEFCLK
Trigger: CTTTAGACAAAATTCTGAATCATCTCTGAACTTTGTTTTATAGCACATAAGGACATTTCTTTCTGCCTGGCACAAACCAACTACCAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp CGCCCCTCGCCTAATCTCGCAGGCAGGAGCCCGCAGTaGCTCGCGCAGGACGCCCGGCCGGGCCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: RPSPNLAGRSPQ*LAQDARPGLGL
Trigger: GAGCCCGAGGCCCGGCCGGGCGTCCTGCGCGAGGCACTGCGGGCTCCTGCCTGCGAGATTAGGCGAGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS GCA 72 bp TGGAGGGTGCAGGCGCCTGCCAGTTCACACTGGGTGTaGGACTGGGGACCAGGGGCTGACGGCAGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: WRVQAPASSHWV*DWGPGADGRAL
Trigger: CAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCCTGCACCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp GGAAGGTGGAGGGTGCAGGCGCCTGCCAGTTCACACTaGGTGTGCGACTGGGGACCAGGGGCTGACGGCAGG +
Preference number: 6 (lower is better)
Translates to: GRWRVQAPASSH*VCDWGPGADGR
Trigger: CCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGAACTGGCAGGCGCCTGCACCCTCCACCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp GAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTGGTaGTGGGCCACCCTGGCCATGATCACAGGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: EGTAASEPCRLW*WATLAMITGEV
Trigger: AACCTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS CCA 72 bp GTTGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTaGTGCTGGGCCACCCTGGCCATGATCACAGGGGAG +
Preference number: 6 (lower is better)
Translates to: VEGTAASEPCRL*CWATLAMITGE
Trigger: CTCCCCTGTGATCATGGCCAGGGTGGCCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000483682.1
CDS TCA 72 bp GCAGGGTGGCTCCAGATCACTCACCTGGTCACCGGTTaGGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTG +
Preference number: 6 (lower is better)
Translates to: AGWLQITHLVTG*GDCCIRALPPV
Trigger: CACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGATCTGGAGCCACCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS GCA 72 bp GGTGGAGGATGGACGGGCATTGGGGCAGCTCCGGGGTaGCTGGTGGCATTCCGCACGGCCTCTTCTAAGAGC +
Preference number: 6 (lower is better)
Translates to: GGGWTGIGAAPG*LVAFRTASSKS
Trigger: GCTCTTAGAAGAGGCCGTGCGGAATGCCACCAGGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 90 bp CACCCCTTCCAGTCCCAGCTGCCACCTCTACTGCCCTTGGAGCTGTaGCCTGGCGTGAGGGGCTGCATGCACCTGCCCTGTCTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: HPFQSQLPPLLPLEL*PGVRGCMHLPCLSR
Trigger: CCGGGAAAGACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAGCTGGGACTGGAAGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp CTACTGCCCTTGGAGCTGTTGCCTGGCGTGAGGGGCTaGATGCACCTGCCCTGTCTTTCCCGGCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: LLPLELLPGVRG*MHLPCLSRPEA
Trigger: AGCCTCAGGCCGGGAAAGACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp CTGCTGCCAGGGGGTTGCTGGCCCTCTCCAGGGCGGTaGCATCCAGGCGTTTCTGGTAGCCCTCTAAACGGT +
Preference number: 6 (lower is better)
Translates to: LLPGGCWPSPGR*HPGVSGSPLNG
Trigger: ACCGTTTAGAGGGCTACCAGAAACGCCTGGATGCCACCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 72 bp GATGGACGGGCATTGGGGCAGCTCCGGGGTGCCTGGTaGCATTCCGCACGGCCTCTTCTAAGAGCTCCATCC +
Preference number: 6 (lower is better)
Translates to: DGRALGQLRGAW*HSARPLLRAPS
Trigger: GGATGGAGCTCTTAGAAGAGGCCGTGCGGAATGCCACCAGGCACCCCGGAGCTGCCCCAATGCCCGTCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 72 bp GAGGATGGACGGGCATTGGGGCAGCTCCGGGGTGCCTaGTGGCATTCCGCACGGCCTCTTCTAAGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: EDGRALGQLRGA*WHSARPLLRAP
Trigger: TGGAGCTCTTAGAAGAGGCCGTGCGGAATGCCACCAGGCACCCCGGAGCTGCCCCAATGCCCGTCCATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CAGTCCCAGCTGCCACCTCTACTGCCCTTGGAGCTGTaGCCTGGCGTGAGGGGCTGCATGCACCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: QSQLPPLLPLEL*PGVRGCMHLPC
Trigger: ACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAGCTGGGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp CACCCCTTCCAGTCCCAGCTGCCACCTCTACTGCCCTaGGAGCTGTTGCCTGGCGTGAGGGGCTGCATGCAC +
Preference number: 6 (lower is better)
Translates to: HPFQSQLPPLLP*ELLPGVRGCMH
Trigger: GTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAGCTGGGACTGGAAGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp TGCAGGGTGGCTCCAGATCACTCACCTGGTCACCGGTaGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGT +
Preference number: 6 (lower is better)
Translates to: CRVAPDHSPGHR*RGLLHPSPAAC
Trigger: ACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGATCTGGAGCCACCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS CAA 90 bp TCACACTGGGTGTGCGACTGGGGACCAGGGGCTGACGGCAGGGCCTaGAAGCACTCACCATCTTCCAGAGCGGAGTCAGCGAGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SHWVCDWGPGADGRA*KHSPSSRAESASPS
Trigger: GGAAGGGCTCGCTGACTCCGCTCTGGAAGATGGTGAGTGCTTCAAGGCCCTGCCGTCAGCCCCTGGTCCCCAGTCGCACACCCAGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp GTCTCAAGGCCGTCCATGGTGTTTCCCAACCCGGGGTaGCCTCCCTGCCACCTTGTTCACTCCCCACATCCC +
Preference number: 6 (lower is better)
Translates to: VSRPSMVFPNPG*PPCHLVHSPHP
Trigger: GGGATGTGGGGAGTGAACAAGGTGGCAGGGAGGGCACCCCGGGTTGGGAAACACCATGGACGGCCTTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp CCAGCTGCCACCTCTACTGCCCTTGGAGCTGTTGCCTaGCGTGAGGGGCTGCATGCACCTGCCCTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: PAATSTALGAVA*REGLHAPALSF
Trigger: GAAAGACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp GTAAGATCCAGGCTCTTGAACTCTGCTGCCAGGGGGTaGCTGGCCCTCTCCAGGGCGGTGGCATCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: VRSRLLNSAARG*LALSRAVASRR
Trigger: ACGCCTGGATGCCACCGCCCTGGAGAGGGCCAGCAACCCCCTGGCAGCAGAGTTCAAGAGCCTGGATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 90 bp TTTGTCCTCCACCCCTTCCAGTCCCAGCTGCCACCTCTACTGCCCTaGGAGCTGTTGCCTGGCGTGAGGGGCTGCATGCACCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: FVLHPFQSQLPPLLP*ELLPGVRGCMHLPC
Trigger: ACAGGGCAGGTGCATGCAGCCCCTCACGCCAGGCAACAGCTCCAAGGGCAGTAGAGGTGGCAGCTGGGACTGGAAGGGGTGGAGGACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp AAGGAAAACTGCAGGGTGGCTCCAGATCACTCACCTGGTCACCGGTaGAGGGGACTGCTGCATCCGAGCCCTGCCGCCTGTGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: KENCRVAPDHSPGHR*RGLLHPSPAACGAG
Trigger: CCCAGCACCACAGGCGGCAGGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGATCTGGAGCCACCCTGCAGTTTTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS GCA 72 bp CTGACTGGCCACTCTCTGGTAGTGCAGGGACAACCTTaGTGCCTGCCACCTCAGCTGCCCTGTCTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: LTGHSLVVQGQP*CLPPQLPCLSR
Trigger: CCGGGAAAGACAGGGCAGCTGAGGTGGCAGGCAGCAAGGTTGTCCCTGCACTACCAGAGAGTGGCCAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492592.1
CDS CCA 72 bp GCCGCCGGGCACCTTCGATCTGCTCTTCCAGTAGGCTaGCGGGGTTCCGGCTATAGACCTCACAGATACGCT +
Preference number: 6 (lower is better)
Translates to: AAGHLRSALPVG*RGSGYRPHRYA
Trigger: AGCGTATCTGTGAGGTCTATAGCCGGAACCCCGCCAGCCTACTGGAAGAGCAGATCGAAGGTGCCCGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS CAA 90 bp GGCCAGTCCCTGAAGGAGGAGTGGGGACGCAGAGGATTTGGTGGTTaGTACGGTTATGGTCCTGGTGACGCGGCTGCGTCTGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: GQSLKEEWGRRGFGG*YGYGPGDAAASAVL
Trigger: CAGCACAGCAGACGCAGCCGCGTCACCAGGACCATAACCGTACAAACCACCAAATCCTCTGCGTCCCCACTCCTCCTTCAGGGACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS TCA 72 bp GAGATGATGAGGTCTCTCAGCTGCAGCCGCCGACACTaGGGGTGGCTCTCAGCCTCCTGCATGAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: EMMRSLSCSRRH*GWLSASCMKSW
Trigger: CCAGCTCTTCATGCAGGAGGCTGAGAGCCACCCTCAGTGTCGGCGGCTGCAGCTGAGAGACCTCATCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000461678.1
CDS TCA 72 bp CCACATCTTCCAGAGCGGAGTCAGCGAGCCCTTCCATaGACAGAGGGCCTGGGAAGGCCAAGTGGATGGGGT +
Preference number: 6 (lower is better)
Translates to: PHLPERSQRALP*TEGLGRPSGWG
Trigger: ACCCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTGACTCCGCTCTGGAAGATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp CACCATCTTCCAGAGCGGAGTCAGCGAGCCCTTCCATaGACAGAGGGCCTGGGAAGGCCAAGTGGATGGGGT +
Preference number: 6 (lower is better)
Translates to: HHLPERSQRALP*TEGLGRPSGWG
Trigger: ACCCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTGACTCCGCTCTGGAAGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp AAGGATCGTTGTACTGCCCCACTGACCCCAAGGTGGTaGCCTCAGGCACAGGTGAAGCTGGAGGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: KDRCTAPLTPRW*PQAQVKLEGSG
Trigger: GCCAGAGCCCTCCAGCTTCACCTGTGCCTGAGGTCACCACCTTGGGGTCAGTGGGGCAGTACAACGATCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp AGGCATCCGAAGGCTGGCGATGGTGGGAAGGGGACTTaGGCTCTGGTGCAGAATCTCCCAGAGAAGACAGGC +
Preference number: 6 (lower is better)
Translates to: RHPKAGDGGKGT*ALVQNLPEKTG
Trigger: GCCTGTCTTCTCTGGGAGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 72 bp CCGGCCTTCATGGCTGCACCTCCAGGCCGCACAGACTaGACCAGAACAATGCGATCCCCACTGACTGTGAAG +
Preference number: 6 (lower is better)
Translates to: PAFMAAPPGRTD*TRTMRSPLTVK
Trigger: CTTCACAGTCAGTGGGGATCGCATTGTTCTGGTGCAGTCTGTGCGGCCTGGAGGTGCAGCCATGAAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 72 bp GGTAGGTGTTCCAGAGAACAGAGACCCATGTCTTCCTaGTCTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRCSREQRPMSS*SGRSPSSPASW
Trigger: CCAGCTTGCAGGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATGGGTCTCTGTTCTCTGGAACACCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS GCA 72 bp TCCCGGCACTGGTCCCGGGCCCGGCACAGCTTCTCATaGTCAGAGGTGCCACCTACCAAAATGGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: SRHWSRARHSFS*SEVPPTKMDRR
Trigger: TCTTCTGTCCATTTTGGTAGGTGGCACCTCTGAGCATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp CCTGTTGTCTCAGAGGCATCCGAAGGCTGGCGATGGTaGGAAGGGGACTTGCGCTCTGGTGCAGAATCTCCC +
Preference number: 6 (lower is better)
Translates to: PVVSEASEGWRW*EGDLRSGAESP
Trigger: GGGAGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTCTGAGACAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp GCGTCAGAGCCATCCTCAGGGCAGGGCCCCAGTTCATaGCTGTTCCTGGAGTCAGAAGCTAGGGGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: ASEPSSGQGPSS*LFLESEARGSL
Trigger: TAAGGAGCCCCTAGCTTCTGACTCCAGGAACAGCCATGAACTGGGGCCCTGCCCTGAGGATGGCTCTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CCCAGCATGGGACTGCACACCACGCCAGAAGGATCGTaGTACTGCCCCACTGACCCCAAGGTGGTGACCTCA +
Preference number: 6 (lower is better)
Translates to: PSMGLHTTPEGS*YCPTDPKVVTS
Trigger: TGAGGTCACCACCTTGGGGTCAGTGGGGCAGTACAACGATCCTTCTGGCGTGGTGTGCAGTCCCATGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp ACATGGCGCCAGCTGTTATCTGCCTATTCATCCATGGCAGCTGGCTaGCTTCAAACCAGCAGGCGTGGGTGGAGGGGAGCCACCCTTGCC +
Preference number: 6 (lower is better)
Translates to: TWRQLLSAYSSMAAG*LQTSRRGWRGATLA
Trigger: GGCAAGGGTGGCTCCCCTCCACCCACGCCTGCTGGTTTGAAGCAAGCCAGCTGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp CTGCCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTTaGGGCTTTCAGAGCGGCCCAGGCGAATCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: LPFETVSSLPGP*GFQSGPGESLS
Trigger: GCTCAGAGATTCGCCTGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp TGTGTGGAAACTGCCCACAGGCGTGGTGCCACCAGATaGCTCTCCCCCAAGGGACTTGAGCAGCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: CVETAHRRGATR*LSPKGLEQLSV
Trigger: CACAGAGAGCTGCTCAAGTCCCTTGGGGGAGAGTCATCTGGTGGCACCACGCCTGTGGGCAGTTTCCACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS TCA 72 bp GAGCCACCAGTCTCCTGCTGGATCTTCAGCTGTAACTaGGTGACTCGCCGCCGGGCACCTTCGATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: EPPVSCWIFSCN*VTRRRAPSICS
Trigger: AGAGCAGATCGAAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGATCCAGCAGGAGACTGGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS CCA 72 bp AGCGGAGTCAGCGAGCCCTTCCATGAACAGAGGGCCTaGGAAGGCCAAGTGGATGGGGTTCCTTGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: SGVSEPFHEQRA*EGQVDGVPCPD
Trigger: ATCAGGACAAGGAACCCCATCCACTTGGCCTTCCCAGGCCCTCTGTTCATGGAAGGGCTCGCTGACTCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 72 bp AAAGGAAAACTGCAGGGTGGCTCCAGATCACTCACCTaGTCACCGGTTGAGGGGACTGCTGCATCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: KGKLQGGSRSLT*SPVEGTAASEP
Trigger: GGGCTCGGATGCAGCAGTCCCCTCAACCGGTGACCAGGTGAGTGATCTGGAGCCACCCTGCAGTTTTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483682.1
CDS CAA 72 bp TTCAAACCAGCAGGCGTGGGTGGAGGGGAGCCACCCTaGCCTCACATGAGGACCCCAAGTGGTAAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: FKPAGVGGGEPP*PHMRTPSGKGN
Trigger: GTTACCCTTACCACTTGGGGTCCTCATGTGAGGCAAGGGTGGCTCCCCTCCACCCACGCCTGCTGGTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp GGCACGTTCTCTGCCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTaGAGGCTTTCAGAGCGGCCCAGGCGAATCTCTGAGCGTGAACTG +
Preference number: 6 (lower is better)
Translates to: GTFSAFRDRFISSRP*RLSERPRRISEREL
Trigger: CAGTTCACGCTCAGAGATTCGCCTGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAGAGAACGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp TCTTGCCGGTCAATCTCCCGCTGGGTTAGCCCAGCCACCACATCCTaGCCCACTGTATGCTGCCAATTTTGGGCATCTGGCTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SCRSISRWVSPATTS*PTVCCQFWASGSGS
Trigger: GGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGGGCTAACCCAGCGGGAGATTGACCGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp CGGATGAGCACAGCATTGAGCTTGAGCACGGGGCTGAAGGTCTGCTaGCTGTCTGAGGAGCCCACAGCAGTCTTGCTGTGGCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: RMSTALSLSTGLKVC*LSEEPTAVLLWHFS
Trigger: GCTGAAGTGCCACAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGTGCTCAAGCTCAATGCTGTGCTCATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 90 bp CTTGGACAAAATATCTCCAAGGGCAGCCAGCTGCTTCTCAGCCACTaGGCGCTCTCGGAGAGGGTCCCCATCCAGGTCCAGCAGGTCATT +
Preference number: 6 (lower is better)
Translates to: LGQNISKGSQLLLSH*ALSERVPIQVQQVI
Trigger: AATGACCTGCTGGACCTGGATGGGGACCCTCTCCGAGAGCGCCAAGTGGCTGAGAAGCAGCTGGCTGCCCTTGGAGATATTTTGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 90 bp CTGGGCTCATCTATTGGCCTCCCTGTGAGCTTGTCTTGGCTTTTCTaGTCTCAAGGCCGTCCATGGTGTTTCCCAACCCGGGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LGSSIGLPVSLSWLF*SQGRPWCFPTRGAL
Trigger: GAGGGCACCCCGGGTTGGGAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp CTCGAAGACGGATCCCAGCATGGCTCATGTAGGTATTaGGGGCGAAGTCCATGGGGGCGCTCCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LEDGSQHGSCRY*GRSPWGRSCLP
Trigger: AGGAAGACAGGAGCGCCCCCATGGACTTCGCCCTCAATACCTACATGAGCCATGCTGGGATCCGTCTTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS TCA 72 bp CAGCTCCTCAGGTTCAGGTTCACCATGGAACACGTCTaGGTCATCCAGTTCTACCCTGCTGGGTGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: QLLRFRFTMEHV*VIQFYPAGCGA
Trigger: GGCCCCACACCCAGCAGGGTAGAACTGGATGACTCAGACGTGTTCCATGGTGAACCTGAACCTGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS TCA 72 bp CAGAGGATTTGGTGGTTTGTACGGTTATGGTCCTGGTaGCGCGGCTGCGTCTGCTGTGCTGTCTTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: QRIWWFVRLWSW*RGCVCCAVFQG
Trigger: CCCCTGGAAGACAGCACAGCAGACGCAGCCGCGTCACCAGGACCATAACCGTACAAACCACCAAATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS TCA 72 bp CACCAGTCTCCTGCTGGATCTTCAGCTGTAACTGAGTaGCTCGCCGCCGGGCACCTTCGATCTGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: HQSPAGSSAVTE*LAAGHLRSALP
Trigger: TGGAAGAGCAGATCGAAGGTGCCCGGCGGCGAGTCACTCAGTTACAGCTGAAGATCCAGCAGGAGACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS TCA 72 bp CTCTGGCCAACTAGCTGGTGGGGGTTGGGTGGGGAATaGCATCTGTCTCCGCATCCATCTCTCCTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: LWPTSWWGLGGE*HLSPHPSLLKH
Trigger: GTGCTTGAGGAGAGATGGATGCGGAGACAGATGTCATTCCCCACCCAACCCCCACCAGCTAGTTGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp AGCACAGCATTGAGCTTGAGCACGGGGCTGAAGGTCTaGTTGCTGTCTGAGGAGCCCACAGCAGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: STALSLSTGLKV*LLSEEPTAVLL
Trigger: CAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGTGCTCAAGCTCAATGCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS GCA 72 bp CGTTGTCTCCTTCTTCCAGGACCCAGCGTAGGTCTCTaGTCACACGGTACCCAGGGGGAGTATAGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: RCLLLPGPSVGL*SHGTQGEYREG
Trigger: TCCTTCCCTATACTCCCCCTGGGTACCGTGTGAGCAGAGACCTACGCTGGGTCCTGGAAGAAGGAGACAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp AGACCTGTTGTCTCAGAGGCATCCGAAGGCTGGCGATaGTGGGAAGGGGACTTGCGCTCTGGTGCAGAATCT +
Preference number: 6 (lower is better)
Translates to: RPVVSEASEGWR*WEGDLRSGAES
Trigger: AGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTCTGAGACAACAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp GCCCACTGTATGCTGCCAATTTTGGGCATCTGGCTCTaGCTCCAGGTCAGACAGCTGGCCCAGATCATCCTC +
Preference number: 6 (lower is better)
Translates to: AHCMLPILGIWL*LQVRQLAQIIL
Trigger: GAGGATGATCTGGGCCAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp ACCGCTTCATTCACATACTTGAGAATCTCCCGGCACTaGTCCCGGGCCCGGCACAGCTTCTCATGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: TASFTYLRISRH*SRARHSFSCSE
Trigger: CTCTGAGCATGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CCA 72 bp CAGGCTCCACAGGATCAGATGTCGCAGGTTCTCCACTaGAGGGGAAACAGGGTGATGTCTTCCCAGCATGGG +
Preference number: 6 (lower is better)
Translates to: QAPQDQMSQVLH*RGNRVMSSQHG
Trigger: CCCATGCTGGGAAGACATCACCCTGTTTCCCCTCCAGTGGAGAACCTGCGACATCTGATCCTGTGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp TCTGCCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTaGAGGCTTTCAGAGCGGCCCAGGCGAATCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SAFRDRFISSRP*RLSERPRRISE
Trigger: CTCAGAGATTCGCCTGGGCCGCTCTGAAAGCCTCAAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 72 bp TCCAGCAGCAGCACGTGGAGGTCCAAGGTCTTATCCTaGCTGATCCTCCAGGTCAGGGGTCCCTCATGGATC +
Preference number: 6 (lower is better)
Translates to: SSSSTWRSKVLS*LILQVRGPSWI
Trigger: GATCCATGAGGGACCCCTGACCTGGAGGATCAGCAAGGATAAGACCTTGGACCTCCACGTGCTGCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp ACAGCATTGAGCTTGAGCACGGGGCTGAAGGTCTGCTaGCTGTCTGAGGAGCCCACAGCAGTCTTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TALSLSTGLKVC*LSEEPTAVLLW
Trigger: CCACAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGTGCTCAAGCTCAATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CTGAAGGAGGAGTGGGGACGCAGAGGATTTGGTGGTTaGTACGGTTATGGTCCTGGTGACGCGGCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: LKEEWGRRGFGG*YGYGPGDAAAS
Trigger: AGACGCAGCCGCGTCACCAGGACCATAACCGTACAAACCACCAAATCCTCTGCGTCCCCACTCCTCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CATCCCATGTGTGCCCCAGGCTTTGTTCTACTTTTCTaGCCACCCTCTCAGACCAGCCCACTCTTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: HPMCAPGFVLLF*PPSQTSPLFPG
Trigger: CCCCGGGAAGAGTGGGCTGGTCTGAGAGGGTGGCAAGAAAAGTAGAACAAAGCCTGGGGCACACATGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp GTTGTCTCAGAGGCATCCGAAGGCTGGCGATGGTGGGAAGGGGACTaGCGCTCTGGTGCAGAATCTCCCAGAGAAGACAGGCTACTTAAC +
Preference number: 6 (lower is better)
Translates to: VVSEASEGWRWWEGD*RSGAESPREDRLLN
Trigger: GTTAAGTAGCCTGTCTTCTCTGGGAGATTCTGCACCAGAGCGCAAGTCCCCTTCCCACCATCGCCAGCCTTCGGATGCCTCTGAGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp AGCCACTTGTCCTTGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTaGGAAGGTCGTGCCTCTCGAAGACGGATCCCAGCATGGCTCATG +
Preference number: 6 (lower is better)
Translates to: SHLSLSGADWAFSAV*EGRASRRRIPAWLM
Trigger: CATGAGCCATGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS TCA 72 bp TGGGCTTTGATCTACACCAAAGCCACCCGGGTCTGGTaGACGTTGGCATCTCACTCCCGCCCCCAAAATCAG +
Preference number: 6 (lower is better)
Translates to: WALIYTKATRVW*TLASHSRPQNQ
Trigger: CTGATTTTGGGGGCGGGAGTGAGATGCCAACGTTCACCAGACCCGGGTGGCTTTGGTGTAGATCAAAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486670.1
CDS GCA 72 bp CATGTCAACATCACTGCGAGAGCGGGGCACGTTCTCTaGCTTTCGAGACCGTTTCATCTCTTCCCGGCCCTT +
Preference number: 6 (lower is better)
Translates to: HVNITARAGHVL*LSRPFHLFPAL
Trigger: AAGGGCCGGGAAGAGATGAAACGGTCTCGAAAGGCAGAGAACGTGCCCCGCTCTCGCAGTGATGTTGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp CCTTGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTTaGAAGGTCGTGCCTCTCGAAGACGGATCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: PCQEQTGPFQLC*KVVPLEDGSQH
Trigger: ATGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 72 bp GGACTCAATGCTCCTGCGGCCCATTTTGGGAGTGAATaGAGGGGTTGGGTTCTCAAGAGACCTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: GLNAPAAHFGSE*RGWVLKRPGGE
Trigger: CTCTCCACCAGGTCTCTTGAGAACCCAACCCCTCCATTCACTCCCAAAATGGGCCGCAGGAGCATTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp ATCCTTGCCCACTGTATGCTGCCAATTTTGGGCATCTaGCTCTGGCTCCAGGTCAGACAGCTGGCCCAGATC +
Preference number: 6 (lower is better)
Translates to: ILAHCMLPILGI*LWLQVRQLAQI
Trigger: GATCTGGGCCAGCTGTCTGACCTGGAGCCAGAGCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp GATGACTCTCCCCCAAGGGACTTGAGCAGCTCTCTGTaGGCCAGCTCCATATCCTTGAGCCTGTTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: DDSPPRDLSSSL*ASSISLSLLSL
Trigger: CAAGCTCAACAGGCTCAAGGATATGGAGCTGGCCCACAGAGAGCTGCTCAAGTCCCTTGGGGGAGAGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 72 bp GAGGTGCCACCTACCAAAATGGACAGAAGAGATGGTTaGGGCTCCTGCCTGAGAAGTCCAACATGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: EVPPTKMDRRDG*GSCLRSPTWRQ
Trigger: CTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCTTCTGTCCATTTTGGTAGGTGGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp CCACTGGAGGGGAAACAGGGTGATGTCTTCCCAGCATaGGACTGCACACCACGCCAGAAGGATCGTTGTACT +
Preference number: 6 (lower is better)
Translates to: PLEGKQGDVFPA*DCTPRQKDRCT
Trigger: AGTACAACGATCCTTCTGGCGTGGTGTGCAGTCCCATGCTGGGAAGACATCACCCTGTTTCCCCTCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp TCCTTGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTaGGAAGGTCGTGCCTCTCGAAGACGGATCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SLSGADWAFSAV*EGRASRRRIPA
Trigger: TGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 72 bp TCAATCTCCCGCTGGGTTAGCCCAGCCACCACATCCTaGCCCACTGTATGCTGCCAATTTTGGGCATCTGGC +
Preference number: 6 (lower is better)
Translates to: SISRWVSPATTS*PTVCCQFWASG
Trigger: GCCAGATGCCCAAAATTGGCAGCATACAGTGGGCAAGGATGTGGTGGCTGGGCTAACCCAGCGGGAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp TCTGTAGTCGTGGATCTGCTCTTGGATCTCAGGCATGGCTGCCTCTaGAGCTTCACAGAGAACACCACGGGCATCTTCGCTGTTCCGCAG +
Preference number: 6 (lower is better)
Translates to: SVVVDLLLDLRHGCL*SFTENTTGIFAVPQ
Trigger: CTGCGGAACAGCGAAGATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGACTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 90 bp ACCTTCCTCCCTGGGCTCATCTATTGGCCTCCCTGTGAGCTTGTCTaGGCTTTTCTTGTCTCAAGGCCGTCCATGGTGTTTCCCAACCCG +
Preference number: 6 (lower is better)
Translates to: TFLPGLIYWPPCELV*AFLVSRPSMVFPNP
Trigger: CGGGTTGGGAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAGGGAGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp TGGGGACCTTCCTCCCTGGGCTCATCTATTGGCCTCCCTGTGAGCTaGTCTTGGCTTTTCTTGTCTCAAGGCCGTCCATGGTGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: WGPSSLGSSIGLPVS*SWLFLSQGRPWCFP
Trigger: TGGGAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAGGGAGGAAGGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp TGGATCTGCTCTTGGATCTCAGGCATGGCTGCCTCTTaGGCTTCACAGAGAACACCACGGGCATCTTCGCTG +
Preference number: 6 (lower is better)
Translates to: WICSWISGMAAS*ASQRTPRASSL
Trigger: CAGCGAAGATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS TCA 72 bp GCAGCAGCACGTGGAGGTCCAAGGTCTTATCCTTGCTaGTCCTCCAGGTCAGGGGTCCCTCATGGATCATTT +
Preference number: 6 (lower is better)
Translates to: AAARGGPRSYPC*SSRSGVPHGSF
Trigger: AAATGATCCATGAGGGACCCCTGACCTGGAGGATCAGCAAGGATAAGACCTTGGACCTCCACGTGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS GCA 72 bp GTAGTCGTGGATCTGCTCTTGGATCTCAGGCATGGCTaGCTCTTGAGCTTCACAGAGAACACCACGGGCATC +
Preference number: 6 (lower is better)
Translates to: VVVDLLLDLRHG*LLSFTENTTGI
Trigger: GATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS GCA 72 bp AGCAGACTGGGCCTTTTCAGCTGTGTTGGAAGGTCGTaGCTCTCGAAGACGGATCCCAGCATGGCTCATGTA +
Preference number: 6 (lower is better)
Translates to: SRLGLFSCVGRS*LSKTDPSMAHV
Trigger: TACATGAGCCATGCTGGGATCCGTCTTCGAGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 72 bp CAACATGGCGCCAGCTGTTATCTGCCTATTCATCCATaGCAGCTGGCTTGCTTCAAACCAGCAGGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: QHGASCYLPIHP*QLACFKPAGVG
Trigger: ACCCACGCCTGCTGGTTTGAAGCAAGCCAGCTGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp GGTCAGTTCCCAGAAACCCAGGAGACAGGTGGCCCTTaGGCAGATGGAATGAAAAATGCTGCTGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: GQFPETQETGGP*ADGMKNAAGRE
Trigger: CTCCCTTCCAGCAGCATTTTTCATTCCATCTGCCCAAGGGCCACCTGTCTCCTGGGTTTCTGGGAACTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp GTGGATCTGCTCTTGGATCTCAGGCATGGCTGCCTCTaGAGCTTCACAGAGAACACCACGGGCATCTTCGCT +
Preference number: 6 (lower is better)
Translates to: VDLLLDLRHGCL*SFTENTTGIFA
Trigger: AGCGAAGATGCCCGTGGTGTTCTCTGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 72 bp CGGTTCTCTGTTTGTTTTACCGCTTCATTCACATACTaGAGAATCTCCCGGCACTGGTCCCGGGCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: RFSVCFTASFTY*RISRHWSRARH
Trigger: GTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAACAGAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CGAATGTCCAACTCCAAAGCCTGCCTGATATCGGCGTaGTCTCCTTCTTCCAGGACCCAGCGTAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: RMSNSKACLISA*SPSSRTQRRSL
Trigger: CAGAGACCTACGCTGGGTCCTGGAAGAAGGAGACAACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp AAACGGTGGCGGTTCTCTGTTTGTTTTACCGCTTCATTCACATACTaGAGAATCTCCCGGCACTGGTCCCGGGCCCGGCACAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: KRWRFSVCFTASFTY*RISRHWSRARHSFS
Trigger: TGAGAAGCTGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAACAGAGAACCGCCACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 90 bp ACGGGGCTGAAGGTCTGCTTGCTGTCTGAGGAGCCCACAGCAGTCTaGCTGTGGCACTTCAGCAATAGCTTCTCATCCTGTTTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: TGLKVCLLSEEPTAV*LWHFSNSFSSCFCS
Trigger: GCTACAGAAACAGGATGAGAAGCTATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTTCAGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 90 bp TCTGAATCTCGAATGTCCAACTCCAAAGCCTGCCTGATATCGGCGTaGTCTCCTTCTTCCAGGACCCAGCGTAGGTCTCTGCTCACACGG +
Preference number: 6 (lower is better)
Translates to: SESRMSNSKACLISA*SPSSRTQRRSLLTR
Trigger: CCGTGTGAGCAGAGACCTACGCTGGGTCCTGGAAGAAGGAGACAACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp GGTTCTCTGTTTGTTTTACCGCTTCATTCACATACTTaGGAATCTCCCGGCACTGGTCCCGGGCCCGGCACA +
Preference number: 6 (lower is better)
Translates to: GSLFVLPLHSHT*ESPGTGPGPGT
Trigger: TGTGCCGGGCCCGGGACCAGTGCCGGGAGATTCTCAAGTATGTGAATGAAGCGGTAAAACAAACAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS TCA 72 bp GCTCTGAATCTCGAATGTCCAACTCCAAAGCCTGCCTaGTATCGGCGTTGTCTCCTTCTTCCAGGACCCAGC +
Preference number: 6 (lower is better)
Translates to: ALNLECPTPKPA*YRRCLLLPGPS
Trigger: GCTGGGTCCTGGAAGAAGGAGACAACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp CGAAGTCCATGGGGGCGCTCCTGTCTTCCTCATACTTaGACAAAATATCTCCAAGGGCAGCCAGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RSPWGRSCLPHT*TKYLQGQPAAS
Trigger: AGAAGCAGCTGGCTGCCCTTGGAGATATTTTGTCCAAGTATGAGGAAGACAGGAGCGCCCCCATGGACTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 72 bp AAGAACGGTAGCCACTTGTCCTTGTCAGGAGCAGACTaGGCCTTTTCAGCTGTGTTGGAAGGTCGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: KNGSHLSLSGAD*AFSAVLEGRAS
Trigger: AGAGGCACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CCA 72 bp AGAGATGGTTGGGGCTCCTGCCTGAGAAGTCCAACATaGCGCCAGCTGTTATCTGCCTATTCATCCATGGCA +
Preference number: 6 (lower is better)
Translates to: RDGWGSCLRSPT*RQLLSAYSSMA
Trigger: TGCCATGGATGAATAGGCAGATAACAGCTGGCGCCATGTTGGACTTCTCAGGCAGGAGCCCCAACCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp CAGTGTGCGCTTCGTTCTGTAGTCGTGGATCTGCTCTaGGATCTCAGGCATGGCTGCCTCTTGAGCTTCACA +
Preference number: 6 (lower is better)
Translates to: QCALRSVVVDLL*DLRHGCLLSFT
Trigger: TGTGAAGCTCAAGAGGCAGCCATGCCTGAGATCCAAGAGCAGATCCACGACTACAGAACGAAGCGCACACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 72 bp TCTATTGGCCTCCCTGTGAGCTTGTCTTGGCTTTTCTaGTCTCAAGGCCGTCCATGGTGTTTCCCAACCCGG +
Preference number: 6 (lower is better)
Translates to: SIGLPVSLSWLF*SQGRPWCFPTR
Trigger: CCGGGTTGGGAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS TCA 72 bp TCTTCATGGCTTCACACCAGGAATTGTGAATCTCTATaGGTTCAGGCAGGTTCGGGAAGAGCCGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SSWLHTRNCESL*VQAGSGRAGPA
Trigger: AGCTGGCCCGGCTCTTCCCGAACCTGCCTGAACTCATAGAGATTCACAATTCCTGGTGTGAAGCCATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000461678.1
CDS TCA 72 bp CCTTTAAACTTGCAGGTTCCTCCACCTACCCCAGCCTaGTTCTCAGACCCAGCCTACGTTCGGCCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PLNLQVPPPTPA*FSDPAYVRPFS
Trigger: AGAAAAAGGCCGAACGTAGGCTGGGTCTGAGAATCAGGCTGGGGTAGGTGGAGGAACCTGCAAGTTTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS CCA 72 bp TGGGAATCCAGAGAGAGCCGGCCTTCTGATGGTCTCTaGCTGGTGTCACCATATAGTGGAAGTATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: WESRESRPSDGL*LVSPYSGSMSC
Trigger: ACAGGACATACTTCCACTATATGGTGACACCAGCCAGAGACCATCAGAAGGCCGGCTCTCTCTGGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361409.2
CDS CCA 72 bp AAAGCTTCCGGTCGAGAGTCGTTGTGTCCCAGGTTCTaGGGCATCATACTGCTGGTTGTTCTCAAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: KASGRESLCPRF*GIILLVVLKVL
Trigger: CAGCACTTTGAGAACAACCAGCAGTATGATGCCCCAGAACCTGGGACACAACGACTCTCGACCGGAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp TGGGAATCCAGAGAGAGCCGGCCTTCTGATGGTCTCTaGCTGGTGTCACCATATAGTGGAAGTATGTCCACT +
Preference number: 6 (lower is better)
Translates to: WESRESRPSDGL*LVSPYSGSMST
Trigger: AGTGGACATACTTCCACTATATGGTGACACCAGCCAGAGACCATCAGAAGGCCGGCTCTCTCTGGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368194.8
ENST00000483682.1
CDS CCA 72 bp CTGGGCTCATCTATTGGCCTCCCTGTGAGCTTGTCTTaGCTTTTCTTGTCTCAAGGCCGTCCATGGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LGSSIGLPVSLS*LFLSQGRPWCF
Trigger: GAAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp CTGCTCTTCTTGGTCTTAGGGAAGAACGGTAGCCACTaGTCCTTGTCAGGAGCAGACTGGGCCTTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LLFLVLGKNGSH*SLSGADWAFSA
Trigger: AGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTTCCCTAAGACCAAGAAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 72 bp AAGGTCTGCTTGCTGTCTGAGGAGCCCACAGCAGTCTaGCTGTGGCACTTCAGCAATAGCTTCTCATCCTGT +
Preference number: 6 (lower is better)
Translates to: KVCLLSEEPTAV*LWHFSNSFSSC
Trigger: ACAGGATGAGAAGCTATTGCTGAAGTGCCACAGCAAGACTGCTGTGGGCTCCTCAGACAGCAAGCAGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
CDS CAA 72 bp CCTGGGCTCATCTATTGGCCTCCCTGTGAGCTTGTCTaGGCTTTTCTTGTCTCAAGGCCGTCCATGGTGTTT +
Preference number: 6 (lower is better)
Translates to: PGLIYWPPCELV*AFLVSRPSMVF
Trigger: AAACACCATGGACGGCCTTGAGACAAGAAAAGCCAAGACAAGCTCACAGGGAGGCCAATAGATGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 90 bp AATGCGATCCCCACTGACTGTGAAGCCGAAGCCATGCTGGTCCTTTaGGATAATGACACAGCGTTGAACGAGACCTGTTGTCTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: NAIPTDCEAEAMLVL*DNDTALNETCCLRG
Trigger: GCCTCTGAGACAACAGGTCTCGTTCAACGCTGTGTCATTATCCAAAAGGACCAGCATGGCTTCGGCTTCACAGTCAGTGGGGATCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp TTGCTGCTCTTCTTGGTCTTAGGGAAGAACGGTAGCCACTTGTCCTaGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTTGGAAGGTCGT +
Preference number: 6 (lower is better)
Translates to: LLLFLVLGKNGSHLS*SGADWAFSAVLEGR
Trigger: ACGACCTTCCAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTTCCCTAAGACCAAGAAGAGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 90 bp TCCTGTCCAGTTCTGGAGACTCCCATATCCCAGAATTTCTGGTCCTaGGGGGTAGGTGTTCCAGAGAACAGAGACCCATGTCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SCPVLETPISQNFWS*GVGVPENRDPCLPA
Trigger: AGCAGGAAGACATGGGTCTCTGTTCTCTGGAACACCTACCCCCAAGGACCAGAAATTCTGGGATATGGGAGTCTCCAGAACTGGACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CAA 90 bp TTCTTCCTGCCTCAGCATATTCCTGAGGATCTGGGTGGCATGTTTTaGAACTTCGGGATCCTGCAGAGGTTTGGGTCCTGTGATGCGTTG +
Preference number: 6 (lower is better)
Translates to: FFLPQHIPEDLGGMF*NFGILQRFGSCDAL
Trigger: CAACGCATCACAGGACCCAAACCTCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGGCAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp CTCAGCATATTCCTGAGGATCTGGGTGGCATGTTTTTaGACTTCGGGATCCTGCAGAGGTTTGGGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: LSIFLRIWVACF*TSGSCRGLGPV
Trigger: CACAGGACCCAAACCTCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 72 bp ACTGCTTTGAAGACGCTGATAGCTCCTGGGAATCCCTaGCTCTACTACAACCAGCTCTACAGATGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: TALKTLIAPGNP*LYYNQLYRCKG
Trigger: TCCCTTGCATCTGTAGAGCTGGTTGTAGTAGAGGCAGGGATTCCCAGGAGCTATCAGCGTCTTCAAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp CTAAGCTCTGAATCTCGAATGTCCAACTCCAAAGCCTaGCTGATATCGGCGTTGTCTCCTTCTTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: LSSESRMSNSKA*LISALSPSSRT
Trigger: GGTCCTGGAAGAAGGAGACAACGCCGATATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGAGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CCA 72 bp TGTCCAGTTCTGGAGACTCCCATATCCCAGAATTTCTaGTCCTTGGGGGTAGGTGTTCCAGAGAACAGAGAC +
Preference number: 6 (lower is better)
Translates to: CPVLETPISQNF*SLGVGVPENRD
Trigger: GTCTCTGTTCTCTGGAACACCTACCCCCAAGGACCAGAAATTCTGGGATATGGGAGTCTCCAGAACTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CCA 72 bp CAGACAGATCACTGCTTTGAAGACGCTGATAGCTCCTaGGAATCCCTGCCTCTACTACAACCAGCTCTACAG +
Preference number: 6 (lower is better)
Translates to: QTDHCFEDADSS*ESLPLLQPALQ
Trigger: CTGTAGAGCTGGTTGTAGTAGAGGCAGGGATTCCCAGGAGCTATCAGCGTCTTCAAAGCAGTGATCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp CCCACTGACTGTGAAGCCGAAGCCATGCTGGTCCTTTaGGATAATGACACAGCGTTGAACGAGACCTGTTGT +
Preference number: 6 (lower is better)
Translates to: PTDCEAEAMLVL*DNDTALNETCC
Trigger: ACAACAGGTCTCGTTCAACGCTGTGTCATTATCCAAAAGGACCAGCATGGCTTCGGCTTCACAGTCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 72 bp CCTCAGCATATTCCTGAGGATCTGGGTGGCATGTTTTaGAACTTCGGGATCCTGCAGAGGTTTGGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: PQHIPEDLGGMF*NFGILQRFGSC
Trigger: ACAGGACCCAAACCTCTGCAGGATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 72 bp TTCTTGGTCTTAGGGAAGAACGGTAGCCACTTGTCCTaGTCAGGAGCAGACTGGGCCTTTTCAGCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: FLVLGKNGSHLS*SGADWAFSAVL
Trigger: CAACACAGCTGAAAAGGCCCAGTCTGCTCCTGACAAGGACAAGTGGCTACCGTTCTTCCCTAAGACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000486670.1
CDS CAA 72 bp GTTCTGGAGACTCCCATATCCCAGAATTTCTGGTCCTaGGGGGTAGGTGTTCCAGAGAACAGAGACCCATGT +
Preference number: 6 (lower is better)
Translates to: VLETPISQNFWS*GVGVPENRDPC
Trigger: ACATGGGTCTCTGTTCTCTGGAACACCTACCCCCAAGGACCAGAAATTCTGGGATATGGGAGTCTCCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000487682.5
ENST00000492592.1
CDS CAA 72 bp TCAGCCTCCTGCATGAAGAGCTGGAATCGACTCTCCTaGCGTTGCTTGGTCTTGATTAGCTCTAGGGCTATT +
Preference number: 6 (lower is better)
Translates to: SASCMKSWNRLS*RCLVLISSRAI
Trigger: AATAGCCCTAGAGCTAATCAAGACCAAGCAACGCAAGGAGAGTCGATTCCAGCTCTTCATGCAGGAGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361409.2
ENST00000368194.8
ENST00000461678.1
CDS CAA 72 bp CAATTTTTGAGCAAGGTGAGAGGAGGGCCTCCCAACTaGAAGATAGAATCCTTTCTCCTCCAGCTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: QFLSKVRGGPPN*KIESFLLQLSG
Trigger: TCCTGAGAGCTGGAGGAGAAAGGATTCTATCTTCAAGTTGGGAGGCCCTCCTCTCACCTTGCTCAAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 72 bp GATTTGATCAGCTTTACCACTTCCAGGTGTGAGCTATaGGTCACCATGGTGCCGTTGACTTTGATGATCCGG +
Preference number: 6 (lower is better)
Translates to: DLISFTTSRCEL*VTMVPLTLMIR
Trigger: CCGGATCATCAAAGTCAACGGCACCATGGTGACCAATAGCTCACACCTGGAAGTGGTAAAGCTGATCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp TTTCTCGGTGTCTCCACGGTTCCAGAATCCTGTAGCTTTGGTGTCTaGATCAGGATTGAATCGCTTGCAATTTTTGAGCAAGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: FLGVSTVPESCSFGV*IRIESLAIFEQGER
Trigger: CCTCTCACCTTGCTCAAAAATTGCAAGCGATTCAATCCTGATCAAGACACCAAAGCTACAGGATTCTGGAACCGTGGAGACACCGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp AATCCTTTCTCCTCCAGCTCTCAGGACCCTGGTAACTaGTGCTCCACTCTACTTCTACCAGTGAACATGATT +
Preference number: 6 (lower is better)
Translates to: NPFSSSSQDPGN*CSTLLLPVNMI
Trigger: AATCATGTTCACTGGTAGAAGTAGAGTGGAGCATCAGTTACCAGGGTCCTGAGAGCTGGAGGAGAAAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp TCTGGGGCATCATACTGCTGGTTGTTCTCAAAGTGCTaGATGATGTTCCTCACATTGCCTGGTTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: SGASYCWLFSKC*MMFLTLPGLTS
Trigger: GGAAGTCAAACCAGGCAATGTGAGGAACATCATTCAGCACTTTGAGAACAACCAGCAGTATGATGCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CCA 72 bp TTAACCTGTCTATACTCTGGGGTAACCTTACACTCATaGTTTCTCGGTGTCTCCACGGTTCCAGAATCCTGT +
Preference number: 6 (lower is better)
Translates to: LTCLYSGVTLHS*FLGVSTVPESC
Trigger: ACAGGATTCTGGAACCGTGGAGACACCGAGAAACCATGAGTGTAAGGTTACCCCAGAGTATAGACAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp AAAAAGGACGAAGACACCAAAGACCACAAGGCACAGTaGCTTGCTAAGGTCACAAAGCAGTGTCAGAATGAG +
Preference number: 6 (lower is better)
Translates to: KKDEDTKDHKAQ*LAKVTKQCQNE
Trigger: CTCATTCTGACACTGCTTTGTGACCTTAGCAAGTCACTGTGCCTTGTGGTCTTTGGTGTCTTCGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461678.1
CDS TCA 72 bp AAAGCCACACAGATATTAAGTGGCAGAGCTAAGCTCTaGATCTCGAATGTCCAACTCCAAAGCCTGCCTGAT +
Preference number: 6 (lower is better)
Translates to: KATQILSGRAKL*ISNVQLQSLPD
Trigger: ATCAGGCAGGCTTTGGAGTTGGACATTCGAGATTCAGAGCTTAGCTCTGCCACTTAATATCTGTGTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS GCA 72 bp GTTGGTTTGTGCCAGGCAGAAAGAAATGTCCTTATGTaGTTTTCTCACAACTTTGTAACCTCCTGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VGLCQAERNVLM*FSHNFVTSCCL
Trigger: GAGGCAGCAGGAGGTTACAAAGTTGTGAGAAAAGCACATAAGGACATTTCTTTCTGCCTGGCACAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492592.1
CDS TCA 72 bp TCTCCACGGTTCCAGAATCCTGTAGCTTTGGTGTCTTaGTCAGGATTGAATCGCTTGCAATTTTTGAGCAAG +
Preference number: 6 (lower is better)
Translates to: SPRFQNPVALVS*SGLNRLQFLSK
Trigger: CTTGCTCAAAAATTGCAAGCGATTCAATCCTGATCAAGACACCAAAGCTACAGGATTCTGGAACCGTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS TCA 72 bp CCTGTAATTCTTTTTCTTCCTGCCTCAGCATATTCCTaGGGATCTGGGTGGCATGTTTTTGAACTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: PVILFLPASAYS*GSGWHVFELRD
Trigger: ATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGGCAGGAAGAAAAAGAATTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361409.2
CDS TCA 72 bp GCTGTAATTCTTTTTCTTCCTGCCTCAGCATATTCCTaGGGATCTGGGTGGCATGTTTTTGAACTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: AVILFLPASAYS*GSGWHVFELRD
Trigger: ATCCCGAAGTTCAAAAACATGCCACCCAGATCCTCAGGAATATGCTGAGGCAGGAAGAAAAAGAATTACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 72 bp TCAAATCAGATTGGGGTTCCTAACACCTCTCTGTCCTaGCTCCAATGTCTGAAATTTGGGGGTAGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: SNQIGVPNTSLS*LQCLKFGGSER
Trigger: TCTTTCACTACCCCCAAATTTCAGACATTGGAGTCAGGACAGAGAGGTGTTAGGAACCCCAATCTGATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487682.5
CDS CAA 72 bp GTCTCCACGGTTCCAGAATCCTGTAGCTTTGGTGTCTaGATCAGGATTGAATCGCTTGCAATTTTTGAGCAA +
Preference number: 6 (lower is better)
Translates to: VSTVPESCSFGV*IRIESLAIFEQ
Trigger: TTGCTCAAAAATTGCAAGCGATTCAATCCTGATCAAGACACCAAAGCTACAGGATTCTGGAACCGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 72 bp GGCTTCCCAATGTATTTGAGGATAGGGTTTCGCTTCTaGTCCTCCAAGGCATCCTTTTCTTTCTTGGAATTG +
Preference number: 6 (lower is better)
Translates to: GFPMYLRIGFRF*SSKASFSFLEL
Trigger: CAATTCCAAGAAAGAAAAGGATGCCTTGGAGGACAAGAAGCGAAACCCTATCCTCAAATACATTGGGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS GCA 72 bp ATAGTATGTACACAACAGCACTCCTTCCAAGTCCAGTaGAACCCTGGGAACCAAAATTTATGGACTTCCTTA +
Preference number: 6 (lower is better)
Translates to: IVCTQQHSFQVQ*NPGNQNLWTSL
Trigger: TAAGGAAGTCCATAAATTTTGGTTCCCAGGGTTGCACTGGACTTGGAAGGAGTGCTGTTGTGTACATACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361409.2
ENST00000368194.8
CDS CAA 90 bp AGAAAGACGGCTCCCTTATTATTCGTTCGGATTATTATTGTGGATTaGAGTTCGAGGTGGGTTTTTCTTCCACACCAGACTCCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: RKTAPLLFVRIIIVD*SSRWVFLPHQTPGK
Trigger: TTTTCCAGGAGTCTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATCCACAATAATAATCCGAACGAATAATAAGGGAGCCGTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS TCA 72 bp CTCCCTTATTATTCGTTCGGATTATTATTGTGGATTTaGGTTCGAGGTGGGTTTTTCTTCCACACCAGACTC +
Preference number: 6 (lower is better)
Translates to: LPYYSFGLLLWI*VRGGFFFHTRL
Trigger: GAGTCTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATCCACAATAATAATCCGAACGAATAATAAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8
CDS CAA 72 bp GCTCCCTTATTATTCGTTCGGATTATTATTGTGGATTaGAGTTCGAGGTGGGTTTTTCTTCCACACCAGACT +
Preference number: 6 (lower is better)
Translates to: APLLFVRIIIVD*SSRWVFLPHQT
Trigger: AGTCTGGTGTGGAAGAAAAACCCACCTCGAACTCAAATCCACAATAATAATCCGAACGAATAATAAGGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368194.8