Pregenerated sensors for ARHGDIG (Homo sapiens)
Ensembl gene IDs: ENSG00000242173Ensembl transcript IDs: ENST00000219409.8, ENST00000414650.1, ENST00000447871.5, ENST00000477621.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGCAACACCTCGTCCACTaGCGGCGGCCCACCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGQHLVH*RRPTLL Trigger: AAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTG...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGCACATTGGGCAGGCTTaGGTCCACGGCCGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGHIGQA*VHGRWQ Trigger: CTGCCACCGGCCGTGGACCCAAGCCTGCCCAATGTG...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR GCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGTCGTCCGGGTCCAGCTaGCGGATCTCCAAGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGSSGSS*RISKRL Trigger: GAGCCTCTTGGAGATCCGGCAGCTGGACCCGGACGA...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR GCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGCGCTCGGGCCATAGCTaGCCACCATGTAGACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGRSGHS*PPCRRS Trigger: AGACCGTCTACATGGTGGGCAGCTATGGCCCGAGCG...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | GGGATGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACGCACCCGCTTGTACTTaGCCAGGCTCCTGTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GMLGGPCATTEGGRGDTDAPACT*PGSCRP Trigger: CGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGC...GTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGTGGTCACCTGCACATTaGGCAGGCTTGGGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGWSPAH*AGLGPR Trigger: CCGTGGACCCAAGCCTGCCCAATGTGCAGGTGACCA...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGTCAGCCTGGTCACCTaGACATTGGGCAGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CLGVPVQQLREVGETRTGVSLVT*TLGRLG Trigger: CCCAAGCCTGCCCAATGTGCAGGTGACCAGGCTGAC...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGTCCAGTCCTGGCAGATaGAGAGACCCCACTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLGVPVQQLREVGETRTGSSPGR*RDPTPR Trigger: CCTGGGAGTGGGGTCTCTGCATCTGCCAGGACTGGA...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | GGGATGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACGGTGCTGGGGATGCTTaGGGGTCCCTGTGCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: GMLGGPCATTEGGRGDTDGAGDA*GSLCNN Trigger: GTTGTTGCACAGGGACCCCCAAGCATCCCCAGCACC...GTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGCAGTCCTTCCAGTCCTaGCAGATGCAGAGACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CLGVPVQQLREVGETRTGQSFQS*QMQRPH Trigger: GTGGGGTCTCTGCATCTGCCAGGACTGGAAGGACTG...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGAGGGGAGACACGGACTaGGGGTTCAGTCCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: CLGVPVQQLREVGETRTGRGDTD*GFSPSS Trigger: ACTGGAAGGACTGAACCCCCAGTCCGTGTCTCCCCT...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR TCA 90 bp | GGGATGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTCCTGTCATCGTCGGTaGAGAGGGACACCACCAGAT | + |
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Preference number: 4 (lower is better) Translates to: GMLGGPCATTEGGRGDTDSCHRR*RGTPPD Trigger: ATCTGGTGGTGTCCCTCTTCACCGACGATGACAGGA...GTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | GGGATGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACACAGGAGTGTCAGCCTaGTCACCTGCACATTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GMLGGPCATTEGGRGDTDTGVSA*SPAHWA Trigger: TGCCCAATGTGCAGGTGACCAGGCTGACACTCCTGT...GTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGTTCAGGACAAACACCTaGTCCTTCAGAACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGFRTNT*SFRTAR Trigger: CCTGGCTGTTCTGAAGGACCAGGTGTTTGTCCTGAA...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR TCA 90 bp | GGGATGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTCTCCCTGTGGACCTTaGAGGAGATCTTCACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GMLGGPCATTEGGRGDTDSPCGP*RRSSLC Trigger: ACAGAGTGAAGATCTCCTTCAAGGTCCACAGGGAGA...GTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGCTGACAATCTCCCTGTaGACCTTGAAGGAGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGGPCATTEGGRGDTDWGLTISL*TLKEIF Trigger: GAAGATCTCCTTCAAGGTCCACAGGGAGATTGTCAG...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS GCA 90 bp | TCGGGTGCCGGGGGCGGCTGTCTCCAAATCCCTGGGCTCAGGCTCTaGGCCGCCTCCCATGGCGCCCCGGGCTGGTGGCCTCCTGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SGAGGGCLQIPGLRL*AASHGAPGWWPPEA Trigger: GGCTTCAGGAGGCCACCAGCCCGGGGCGCCATGGGAGGCGGCGCAGAGCCTGAGCCCAGGGATTTGGAGACAGCCGCCCCCGGCACCCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS GCA 90 bp | CGGCGCCCGGTACTCGGGCACAGCCTCATCCAACACCTCGTCCACTaGCGGCGGCCCACCCTCCTTGTCAGCCAGGAGGACTCGGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: RRPVLGHSLIQHLVH*RRPTLLVSQEDSGA Trigger: TGCGCCCGAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGATGAGGCTGTGCCCGAGTACCGGGCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000219409.8 ENST00000447871.5 |
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| CDS GCA 90 bp | ACGGGCCCCGGAGCCTGTTCCGACAGGAGTGTCAGCCTGGTCACCTaGACATTGGGCAGGCTTGGGTCCACGGCCGGTGGCAGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: TGPGACSDRSVSLVT*TLGRLGSTAGGRGP Trigger: GGGGCCCCTGCCACCGGCCGTGGACCCAAGCCTGCCCAATGTGCAGGTGACCAGGCTGACACTCCTGTCGGAACAGGCTCCGGGGCCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS GCA 90 bp | CGGCGCCCGGTACTCGGGCACAGCCTCATCCAACACCTCGTCCACTaGCGGCGGCCCACCCTCCTTGTCAGCCAGGAGGACTGGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RRPVLGHSLIQHLVH*RRPTLLVSQEDWGW Trigger: CCACCCCCAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGATGAGGCTGTGCCCGAGTACCGGGCGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 90 bp | CTCTGGGGGCTCAGGGAGAGAGCGAGCAGAGAGAGCAGGGCGGCCTaGGGAGGTGCCGCACCGCACCCAGACCTTCAGGAGGGGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LWGLRERASRESRAA*GGAAPHPDLQEGPP Trigger: TGGAGGCCCCTCCTGAAGGTCTGGGTGCGGTGCGGCACCTCCCCAGGCCGCCCTGCTCTCTCTGCTCGCTCTCTCCCTGAGCCCCCAGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 90 bp | GGTCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTTaGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATCTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: GPRPVAGAPAAPACT*PGSCRPGPAAGSPR Trigger: TCTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CCA 90 bp | CACCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTTaGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATCTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: HPRPVAGAPAAPACT*PGSCRPGPAAGSPR Trigger: TCTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS GCA 90 bp | CGGCGCCCGGTACTCGGGCACAGCCTCATCCAACACCTCGTCCACTaGCGGCGGCCCACCCTCCTTGTCAGCCAGGAGGACTGGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: RRPVLGHSLIQHLVH*RRPTLLVSQEDWSL Trigger: AAGGGACCAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGATGAGGCTGTGCCCGAGTACCGGGCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414650.1 |
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| CDS GCA 90 bp | ACCGCACCCAGACCTTCAGGAGGGGCCTCCAGAGACCGCCAGGCCTaGAGCTCCTCTGGCCCAGATGTCCACAAGGGCCCCCTCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TAPRPSGGASRDRQA*SSSGPDVHKGPLPD Trigger: GTCAGGGAGGGGGCCCTTGTGGACATCTGGGCCAGAGGAGCTGCAGGCCTGGCGGTCTCTGGAGGCCCCTCCTGAAGGTCTGGGTGCGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS GCA 90 bp | AGCACCCGCTTGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGCTaGCGGATCTCCAAGAGGCTCTTCCTCCCCGGCGCCCGGTACTCG | + |
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Preference number: 5 (lower is better) Translates to: STRLYLARLLSSGSS*RISKRLFLPGARYS Trigger: CGAGTACCGGGCGCCGGGGAGGAAGAGCCTCTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGCGGCCCACCCTCCTaGTCAGCCAGGAGGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGGGPPS*SARRTR Trigger: CCGAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCC...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS GCA 90 bp | CCACCGGAGTCACAAACTCATACTCCTGGGCGCTCGGGCCATAGCTaGCCACCATGTAGACGGTCTTGTCCACGCGCAGGCCCCGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PPESQTHTPGRSGHS*PPCRRSCPRAGPGG Trigger: ACCGCCGGGGCCTGCGCGTGGACAAGACCGTCTACATGGTGGGCAGCTATGGCCCGAGCGCCCAGGAGTATGAGTTTGTGACTCCGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGCACATTGGGCAGGCTaGGGTCCACGGCCGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGAHWAG*GPRPVA Trigger: TGCCACCGGCCGTGGACCCAAGCCTGCCCAATGTGC...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGCCCAGCAGCACCCGCTaGTACTTGGCCAGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGPSSTR*YLARLL Trigger: CAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGG...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CAA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGGGGTGCTGGGGATGCTaGGGGGTCCCTGTGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: LGGPCATTEGGRGDTDWGGCWGC*GVPVQQ Trigger: TTGTTGCACAGGGACCCCCAAGCATCCCCAGCACCC...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 64% GC, longest homopolymer 8 nt, total homopolymer stretches 26 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS GCA 90 bp | GGGTCTCTGAACACTTTCCCACAGTCTAGGAGTTCCTCCCCATGGTaGTCGGGTGCCGGGGGCGGCTGTCTCCAAATCCCTGGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSLNTFPQSRSSSPW*SGAGGGCLQIPGLR Trigger: CCTGAGCCCAGGGATTTGGAGACAGCCGCCCCCGGCACCCGAGCACCATGGGGAGGAACTCCTAGACTGTGGGAAAGTGTTCAGAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 90 bp | CCACTAGCGGACCCTGGCATTCGAGCACCAGGCTGGAGCCCCCTCTaGCCAGCTGTACCTCCCACTATCCAAAGGGACTCAAGGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PLADPGIRAPGWSPL*PAVPPTIQRDSREA Trigger: GGCTTCCCTTGAGTCCCTTTGGATAGTGGGAGGTACAGCTGGCCAGAGGGGGCTCCAGCCTGGTGCTCGAATGCCAGGGTCCGCTAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGAGCACCCGCTTGTACTaGGCCAGGCTCCTGTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGSTRLY*ARLLSS Trigger: GGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCT...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGCTGGTCACCTGCACATaGGGCAGGCTTGGGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGLVTCT*GRLGST Trigger: CGTGGACCCAAGCCTGCCCAATGTGCAGGTGACCAG...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CAA 90 bp | TGCTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGTGTGGTGCAGACACTaGAGGCCGCTGACAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: CLGVPVQQLREVGETRTGVWCRH*RPLTIS Trigger: GGAGATTGTCAGCGGCCTCAAGTGTCTGCACCACAC...CCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS-3UTR CAA 90 bp | CTTGGGGGTCCCTGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTGGGGGATCTCCCTGTGGACCTaGAAGGAGATCTTCACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LGGPCATTEGGRGDTDWGISLWT*KEIFTL Trigger: CAGAGTGAAGATCTCCTTCAAGGTCCACAGGGAGAT...CCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACAGGGACCCCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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| CDS GCA 72 bp | GGGGGCGGCTGTCTCCAAATCCCTGGGCTCAGGCTCTaGGCCGCCTCCCATGGCGCCCCGGGCTGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GGGCLQIPGLRL*AASHGAPGWWP Trigger: AGGCCACCAGCCCGGGGCGCCATGGGAGGCGGCGCAGAGCCTGAGCCCAGGGATTTGGAGACAGCCGCCCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 72 bp | GTGCTCGGGTGCCGGGGGCGGCTGTCTCCAAATCCCTaGGCTCAGGCTCTGCGCCGCCTCCCATGGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VLGCRGRLSPNP*AQALRRLPWRP Trigger: GGGGCGCCATGGGAGGCGGCGCAGAGCCTGAGCCCAGGGATTTGGAGACAGCCGCCCCCGGCACCCGAGCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CAA 72 bp | GCCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTaGGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: AGGRGPSSTRLY*ARLLSSGSSCR Trigger: CCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS CAA 72 bp | CCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTaGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PTAGGRGPSSTR*YLARLLSSGSS Trigger: GCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CAA 90 bp | GCCTGGTCACCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTaGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: AWSPTAGGRGPSSTR*YLARLLSSGSSCRI Trigger: GATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGGTGACCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 72 bp | CCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTTaGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PVAGAPAAPACT*PGSCRPGPAAG Trigger: TCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS CAA 72 bp | TCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTaGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: STAGGRGPSSTR*YLARLLSSGSS Trigger: GCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CAA 90 bp | GGGTCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTaGGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GSTAGGRGPSSTRLY*ARLLSSGSSCRISK Trigger: CTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CAA 90 bp | AGGCTTGGGTCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTaGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: RLGSTAGGRGPSSTR*YLARLLSSGSSCRI Trigger: GATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGACCCAAGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CAA 72 bp | TCCAACACCTCGTCCACTGCCGGCGGCCCACCCTCCTaGTCAGCCAGGAGGACTCGGGCGCACAGCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNTSSTAGGPPS*SARRTRAHSAS Trigger: GCTGGCGCTGTGCGCCCGAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000219409.8 ENST00000447871.5 |
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| CDS CAA 90 bp | TCACCCACGGCCGGTGGCAGGGGCCCCAGCAGCACCCGCTTGTACTaGGCCAGGCTCCTGTCGTCCGGGTCCAGCTGCCGGATCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPTAGGRGPSSTRLY*ARLLSSGSSCRISK Trigger: CTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAAGCGGGTGCTGCTGGGGCCCCTGCCACCGGCCGTGGGTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 72 bp | CTCAGGGAGAGAGCGAGCAGAGAGAGCAGGGCGGCCTaGGGAGGTGCCGCACCGCACCCAGACCTTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRERASRESRAA*GGAAPHPDLQE Trigger: CTCCTGAAGGTCTGGGTGCGGTGCGGCACCTCCCCAGGCCGCCCTGCTCTCTCTGCTCGCTCTCTCCCTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CAA 72 bp | TCCAACACCTCGTCCACTGCCGGCGGCCCACCCTCCTaGTCAGCCAGGAGGACTGGTCCCTTCCCCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SNTSSTAGGPPS*SARRTGPFPTG Trigger: CCCTGTGGGGAAGGGACCAGTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414650.1 |
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| CDS GCA 72 bp | GTACTCGGGCACAGCCTCATCCAACACCTCGTCCACTaGCGGCGGCCCACCCTCCTTGTCAGCCAGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VLGHSLIQHLVH*RRPTLLVSQED Trigger: GTCCTCCTGGCTGACAAGGAGGGTGGGCCGCCGGCAGTGGACGAGGTGTTGGATGAGGCTGTGCCCGAGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS GCA 72 bp | TTGTACTTGGCCAGGCTCCTGTCGTCCGGGTCCAGCTaGCGGATCTCCAAGAGGCTCTTCCTCCCCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LYLARLLSSGSS*RISKRLFLPGA Trigger: GGCGCCGGGGAGGAAGAGCCTCTTGGAGATCCGGCAGCTGGACCCGGACGACAGGAGCCTGGCCAAGTACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS GCA 72 bp | GGAGCCTGTTCCGACAGGAGTGTCAGCCTGGTCACCTaGACATTGGGCAGGCTTGGGTCCACGGCCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GACSDRSVSLVT*TLGRLGSTAGG Trigger: GCCACCGGCCGTGGACCCAAGCCTGCCCAATGTGCAGGTGACCAGGCTGACACTCCTGTCGGAACAGGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CAA 72 bp | TGTTCCGACAGGAGTGTCAGCCTGGTCACCTGCACATaGGGCAGGCTTGGGTCCACGGCCGGTGGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CSDRSVSLVTCT*GRLGSTAGGRG Trigger: GCCCCTGCCACCGGCCGTGGACCCAAGCCTGCCCAATGTGCAGGTGACCAGGCTGACACTCCTGTCGGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 |
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| CDS CCA 72 bp | GACCCTGGCATTCGAGCACCAGGCTGGAGCCCCCTCTaGCCAGCTGTACCTCCCACTATCCAAAGGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: DPGIRAPGWSPL*PAVPPTIQRDS Trigger: TGAGTCCCTTTGGATAGTGGGAGGTACAGCTGGCCAGAGGGGGCTCCAGCCTGGTGCTCGAATGCCAGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS GCA 72 bp | TCACAAACTCATACTCCTGGGCGCTCGGGCCATAGCTaGCCACCATGTAGACGGTCTTGTCCACGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SQTHTPGRSGHS*PPCRRSCPRAG Trigger: GCCTGCGCGTGGACAAGACCGTCTACATGGTGGGCAGCTATGGCCCGAGCGCCCAGGAGTATGAGTTTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000219409.8 ENST00000414650.1 ENST00000447871.5 ENST00000477621.1 |
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| CDS GCA 72 bp | AACACTTTCCCACAGTCTAGGAGTTCCTCCCCATGGTaGTCGGGTGCCGGGGGCGGCTGTCTCCAAATCCCT | + |
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Preference number: 6 (lower is better) Translates to: NTFPQSRSSSPW*SGAGGGCLQIP Trigger: AGGGATTTGGAGACAGCCGCCCCCGGCACCCGAGCACCATGGGGAGGAACTCCTAGACTGTGGGAAAGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 72 bp | CTGAACACTTTCCCACAGTCTAGGAGTTCCTCCCCATaGTGCTCGGGTGCCGGGGGCGGCTGTCTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: LNTFPQSRSSSP*CSGAGGGCLQI Trigger: GATTTGGAGACAGCCGCCCCCGGCACCCGAGCACCATGGGGAGGAACTCCTAGACTGTGGGAAAGTGTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS TCA 72 bp | AGGGCCCTCCACCACCCTGCTCTGGACTGGGGTCTCTaGACACTTTCCCACAGTCTAGGAGTTCCTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RALHHPALDWGL*TLSHSLGVPPH Trigger: ATGGGGAGGAACTCCTAGACTGTGGGAAAGTGTTCAGAGACCCCAGTCCAGAGCAGGGTGGTGGAGGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477621.1 |
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| CDS CCA 72 bp | TGTGCAACAACTGAGGGAGGTAGGGGAGACACGGACTaGGGGTTCAGTCCTTCCAGTCCTGGCAGATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: CATTEGGRGDTD*GFSPSSPGRCR Trigger: TCTGCATCTGCCAGGACTGGAAGGACTGAACCCCCAGTCCGTGTCTCCCCTACCTCCCTCAGTTGTTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219409.8 |
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