RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000047648

Ensembl transcript IDs: ENST00000303025.10, ENST00000337414.9, ENST00000380717.7, ENST00000380718.1, ENST00000380736.5, ENST00000489330.6, ENST00000491514.1, ENST00000495242.5, ENST00000657361.1

Found 1258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCGCGCGACACCGCAGGGTGGGCCCTGCCCTCCGTCGCGGGGGCTaGGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: GARHRRVGPALRRGG*GLSPPSPLRVAVQL
Trigger: GAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGGTGTCGCGCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 90 bp GACACCGCAGGGTGGGCCCTGCCCTCCGTCGCGGGGGCTGCGGCCTaGGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGGGG +
Preference number: 1 (lower is better)
Translates to: DTAGWALPSVAGAAA*VLRAPCVSLSSSAG
Trigger: CCCCGCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGGTGTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 90 bp GTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCCTGGGCCCGGGTATGGAGGCGGGGG +
Preference number: 1 (lower is better)
Translates to: VRGCLHAFRGPLDPG*RCRGLPWARVWRRG
Trigger: CCCCCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp TCCGACCTGGCCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGCGACACCGCAGGGTGGGCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: SDLAVGRSAFPATWT*GVLQARDTAGWALP
Trigger: GGGCAGGGCCCACCCTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp TACTGCTCCGACCTGGCCGTGGGCCGCTCGGCTTTCCCTGCCACCTaGACGTGGGGCGTGCTGCAGGCGCGCGACACCGCAGGGTGGGCC +
Preference number: 1 (lower is better)
Translates to: YCSDLAVGRSAFPAT*TWGVLQARDTAGWA
Trigger: GGCCCACCCTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp TGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCCGCGGGCTTCCCTGGGCCCGGGTAT +
Preference number: 1 (lower is better)
Translates to: WPPWSVGVSTPSGGP*IQAAAAAGFPGPGY
Trigger: ATACCCGGGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp GGTCGTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGC +
Preference number: 1 (lower is better)
Translates to: GRGRRSGSSTAPTWP*AARLSLPPGRGACC
Trigger: GCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp CGGCTCTGCAGCCCGGCCACATCCAGCTCACTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTGGGC +
Preference number: 1 (lower is better)
Translates to: RLCSPATSSSLSLRS*APLRVKYCSDLAVG
Trigger: GCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGGATGTGGCCGGGCTGCAGAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 90 bp GTGTGGCCCGGCTCTGCAGCCCGGCCACATCCAGCTCACTCTCGCTaGGGTCGTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGG +
Preference number: 1 (lower is better)
Translates to: VWPGSAARPHPAHSR*GRGRRSGSSTAPTW
Trigger: CCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 90 bp AGCTCACTCTCGCTGAGGTCGTGGGCGCCGCTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGCCGCTCGGCTTTCCCTGCCACCTGG +
Preference number: 1 (lower is better)
Translates to: SSLSLRSWAPLRVKY*SDLAVGRSAFPATW
Trigger: CCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 90 bp GGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCGTCCCCCAGGCGCGGACTGTCCTGC +
Preference number: 1 (lower is better)
Translates to: GLSVDRSSQICQRSL*QSSQPASPRRGLSC
Trigger: GCAGGACAGTCCGCGCCTGGGGGACGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 90 bp TCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAGTCGAGCCAGCCAGCGTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: SGRASGLSVDRSSQI*QRSLCQSSQPASPR
Trigger: CCTGGGGGACGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 90 bp GGGGGCCGCTTGTCATCCCTCCCACTCCCATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGCAGCCCGGCCACATCCAGCTCACTC +
Preference number: 1 (lower is better)
Translates to: GGRLSSLPLPWGLWH*GVARLCSPATSSSL
Trigger: GAGTGAGCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCATGGGAGTGGGAGGGATGACAAGCGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp GGCCGCGTCCTCTTGCATAGCCAGCAGGGAGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGGGGAGATGTCTCCGCTGGAGGCCTT +
Preference number: 1 (lower is better)
Translates to: GRVLLHSQQGALRQH*GVVVIRGDVSAGGL
Trigger: AAGGCCTCCAGCGGAGACATCTCCCCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp CCTCTGGGCATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTaGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACC +
Preference number: 1 (lower is better)
Translates to: PLGMRLFPRYLRLGV*PAGTLPANDWARHT
Trigger: GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATGCCCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR GCA 90 bp GGGCATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTaGAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCT +
Preference number: 1 (lower is better)
Translates to: GHAFISQISETWSVA*RDPPSQRLGSPYLP
Trigger: AGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR TCA 90 bp GAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCAGATGTaGCCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGC +
Preference number: 1 (lower is better)
Translates to: EGSAFLSFRSAADQM*PTHTEWGGQSASLS
Trigger: GCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGGTCACATCTGATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR TCA 90 bp CTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTaGTCAGATGTGACCCACCCACACGGAGTGGGGAGGGCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: LTHGRVSLFVIQVCS*SDVTHPHGVGRAVC
Trigger: GCAGACTGCCCTCCCCACTCCGTGTGGGTGGGTCACATCTGATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR CCA 90 bp GTCCCAAGATCTGTAGTCAGCAAGCTGGAGACCGAGGAGAGCCGATaGCACACTTCTGGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAA +
Preference number: 1 (lower is better)
Translates to: VPRSVVSKLETEESR*HTSGLKASGLKMQE
Trigger: TTCTTGCATCTTGAGACCGCTGGCTTTCAGACCAGAAGTGTGCCATCGGCTCTCCTCGGTCTCCAGCTTGCTGACTACAGATCTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR CCA 90 bp TTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTaGAGATCCTGCAGGTTGAAAGTGGCAGAGCAGGTTTGTGACTCC +
Preference number: 1 (lower is better)
Translates to: FTAGGNGTLGSSIAH*RSCRLKVAEQVCDS
Trigger: GGAGTCACAAACCTGCTCTGCCACTTTCAACCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR TCA 90 bp ATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGTTaGAAGTGGCAGAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCT +
Preference number: 1 (lower is better)
Translates to: MGLWEAQSLTGDPAG*KWQSRFVTPSIVLS
Trigger: AGAGAGCACTATACTGGGAGTCACAAACCTGCTCTGCCACTTTCAACCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR GCA 90 bp GCTGGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTT +
Preference number: 1 (lower is better)
Translates to: AGYAMEPYSQWRGRE*STSVGELDFSCVTF
Trigger: AAAAGTGACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CCA 90 bp TTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTC +
Preference number: 1 (lower is better)
Translates to: FVFPKAGYAMEPYSQ*RGRECSTSVGELDF
Trigger: GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR GCA 90 bp GAACCTGTCATTCCTGGGTCTTTGGATCCGCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCGAAAGGCTCCTCTGACAGATCTTTC +
Preference number: 1 (lower is better)
Translates to: EPVIPGSLDPLFNVE*QVPQISKGSSDRSF
Trigger: GAAAGATCTGTCAGAGGAGCCTTTCGATATCTGGGGAACTTGGCATTCAACATTAAAAAGCGGATCCAAAGACCCAGGAATGACAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 90 bp CAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTaGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: QICNPNPVYIKFLGC*REKESAGNRSGSSG
Trigger: CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR CCA 90 bp GACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTaGTTCTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGT +
Preference number: 1 (lower is better)
Translates to: DSQYSALLSLDTNTI*FWKVVFIHIVGSAC
Trigger: ACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR GCA 90 bp CTTTTTGTATCTGACTCCTATGTAAAAATATGGCTTCTCATATTCTaGTTCCTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCC +
Preference number: 1 (lower is better)
Translates to: LFVSDSYVKIWLLIF*FLLLVFGIEGRVIP
Trigger: GGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAGGAAGCAGAATATGAGAAGCCATATTTTTACATAGGAGTCAGATACAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CCA 90 bp CAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTGGTTCTaGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTT +
Preference number: 1 (lower is better)
Translates to: QYSALLSLDTNTIWF*KVVFIHIVGSACFL
Trigger: AAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTT +
Preference number: 2 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASSTAPT*PWAARL
Trigger: AAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACT...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp GTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTGGGCCGCTCGGCGTCCTCCGAGCCCCCTaGGTGTCGCTGTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VGAAQGQVLLRPGRGPLGVLRAP*VSLSSS
Trigger: AGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGAC...GCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGCTTTCCCTGCCACCTaGACGTGGGGCGTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLAFPAT*TWGVLQ
Trigger: CTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGC...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CAA 90 bp GGCTGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTaGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GWVRAQTSVSGRASG*SVDRSSQICQRSLC
Trigger: GCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCCCGCTCGGCTTTCCCTaGCACCTGGACGTGGGGCGT +
Preference number: 2 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSPLGFP*HLDVGR
Trigger: ACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGG...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACG +
Preference number: 2 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDAAWPP*SVGVST
Trigger: CGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGC...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp CCGCAGGGTGGGCCCTGCCCTCCGTCGCGGGGGCTGCGGCCTGAGTCCTCCGAGATCGAAAGGCTCCTCTaGCAGATCTTTCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: PQGGPCPPSRGLRPESSEIERLL*QIFPKP
Trigger: AGGCTTGGGAAAGATCTGTCAGAGGAGCCTTTCGAT...CTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCTGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAAWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp CGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGGGGCTCCGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 2 (lower is better)
Translates to: RPESSEPPACRCPALRGSVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...GGAGCCCCGCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp CGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: RLGQGIGVVGRQELPDLPWGLWH*GVARLC
Trigger: GCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCA...TGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAAKETSD*SMSGLP
Trigger: AGGAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGCCGCTCTTAGGGAGCTaGTTTCAAAAATGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLPLLGS*FQKCLQ
Trigger: CTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGG...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 2 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSCRGLP*ARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PWAARLSLPPGRGACCRRGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTGGGCCGCTCGGCCCAGTTATAAAGCTATaGCAAAAGCACAGAAACCCG +
Preference number: 2 (lower is better)
Translates to: VGAAQGQVLLRPGRGPLGPVIKL*QKHRNP
Trigger: CGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGG...GCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCCCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 2 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp CGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCACTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: RLGQGIGVVGRQELPDLPLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...TGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCG +
Preference number: 2 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDLFNVE*QVPQIS
Trigger: CGATATCTGGGGAACTTGGCATTCAACATTAAAAAG...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 2 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCCCACCGAGGCCAATTTaGGGACAGGTTCCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: YSQWRGRECSTSVGELDFPPRPI*GQVPLR
Trigger: TCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGG...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAACCCTGGGCCCGGGTATaGAGGCGGGGGCCGCTTGTC +
Preference number: 2 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQPWARV*RRGPLV
Trigger: GACAAGCGGCCCCCGCCTCCATACCCGGGCCCAGGG...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCCAGCTCACTCTCGCTaGGGTCGTGGGCGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIPAHSR*GRGRRS
Trigger: TGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCC +
Preference number: 2 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDPSGGP*IQAAAA
Trigger: GGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGG...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGCCCACCCACACGGAGTaGGGAGGGCAGTCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQPTHTE*GGQSAS
Trigger: TGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR TCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTCTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGGACGTGGGGCGTGCTaGAGGCGCGCGACACCGCAG +
Preference number: 2 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYGRGAC*RRATPQ
Trigger: CTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR GCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAGGTGTGGCCCGGCTCTaGAGCCCGGCCACATCCAGC +
Preference number: 2 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKGVARL*SPATSS
Trigger: GCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACC...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTCTCCCAGCCAACGACTaGGCTCGCCATACCTTCCTC +
Preference number: 2 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTLPAND*ARHTFL
Trigger: GAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAG...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCTGAGACTTGGAGTGTaGCCTGCAGGGACCCTCCCA +
Preference number: 2 (lower is better)
Translates to: CNSSNWVAPQTSKYATQILRLGV*PAGTLP
Trigger: TGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAGGCCTCCCTGGTCCGTaGGTGTCTCCACGCCTTCCG +
Preference number: 2 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQGLPGP*VSPRLP
Trigger: CGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCC...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTCGTATCGCCATCTGCTaGTCAAAAATAGTTATGCAC +
Preference number: 2 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSRIAIC*SKIVMH
Trigger: GTGCATAACTATTTTTGACCAGCAGATGGCGATACG...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGAAGTTCCTAGGATGCTaGAGGGAAAAAGAATCAGCT +
Preference number: 2 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILKFLGC*REKESA
Trigger: AGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTT...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR GCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGTGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CAA 90 bp CAGAGGAACCTGTCATTCCTGGGTCTTTGGATCCGCTTTTTAATGTaGAATGCCAAGTTCCCCAGATATCGAAAGGCTCCTCTGACAGAT +
Preference number: 2 (lower is better)
Translates to: QRNLSFLGLWIRFLM*NAKFPRYRKAPLTD
Trigger: ATCTGTCAGAGGAGCCTTTCGATATCTGGGGAACTTGGCATTCAACATTAAAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR TCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACTCAATGGCGGGGGCGTaGGTGCTCTACCTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNSMAGA*VLYLCR
Trigger: CCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGA...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR GCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: YSQWRGRECSTSVGELDFLDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTAAGTTAGGGGATCATTaGTCAGTGGTACTATCTGAA +
Preference number: 2 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGKLGDH*SVVLSE
Trigger: TTCAGATAGTACCACTGATCAATGATCCCCTAACTT...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR GCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAATTCTGCGTGACCTGCTaGTCTCGCTCGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKFCVTC*SRSAAW
Trigger: CCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAA...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTTTAGAAATGCTCCCAGCCAACGACTaGGCTCGCCATACCTTCCTC +
Preference number: 2 (lower is better)
Translates to: LEGCLHTYSRFSLFSLEMLPAND*ARHTFL
Trigger: GAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAG...CATTTCTAAAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR GCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAATTTTTCTGCGTGACCTaGTGCTCTCGCTCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKFFCVT*CSRSAA
Trigger: AGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CAA 90 bp GTGGCAGAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATaGGATACTAACACTATTTGGTTCTGGAAGGTTGTCTTCATACAT +
Preference number: 2 (lower is better)
Translates to: VAEQVCDSQYSALLS*DTNTIWFWKVVFIH
Trigger: ATGTATGAAGACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTCTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR CAA 90 bp TTGAAAGTGGCAGAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTaGTCATTGGATACTAACACTATTTGGTTCTGGAAGGTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LKVAEQVCDSQYSAL*SLDTNTIWFWKVVF
Trigger: GAAGACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTCTGCCACTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR GCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCAGCTCAAGCAGTCATaGAGAAGGCCTTCCCTCTTA +
Preference number: 2 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSQLKQS*RRPSLL
Trigger: TAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGCTG...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCAGGCTGGCTACGCAATaGAACCTTATTCTCAATGGC +
Preference number: 2 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFRLATQ*NLILNG
Trigger: GCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCT...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CAA 90 bp AGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTaGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAAT +
Preference number: 2 (lower is better)
Translates to: RDVFRLDIAIWFGFC*FFLRLATQWNLILN
Trigger: ATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR GCA 90 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCATGGCTCCTCTGGGCATaGGTTTATTTCCCAGATATC +
Preference number: 2 (lower is better)
Translates to: NPNPVYIKFLGCWREKESWLLWA*VYFPDI
Trigger: GATATCTGGGAAATAAACGCATGCCCAGAGGAGCCA...TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTTGTAACAGCAGTAATTaGGTGGCACCTCAGACTAGC +
Preference number: 2 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFCNSSN*VAPQTS
Trigger: GCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 2 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACAGGCTGGCTACGCAATaGAACCTTATTCTCAATGGC +
Preference number: 2 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNRLATQ*NLILNG
Trigger: GCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCT...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGGGGATCATTGATCAGTaGTACTATCTGAACAATTGT +
Preference number: 2 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQGIIDQ*YYLNNC
Trigger: ACAATTGTTCAGATAGTACCACTGATCAATGATCCC...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR TCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTGCATAAAATACTaGAGCGTATCGCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFNCIKY*SVSPSA
Trigger: AGCAGATGGCGATACGCTTCAGTATTTTATGCAATT...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCAATTGCATAAAATACTaGAGCGTATCGCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: MAKAQKPACAHSRTFYRINCIKY*SVSPSA
Trigger: AGCAGATGGCGATACGCTTCAGTATTTTATGCAATT...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGTTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMLDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: RRHINTVRLYQARVVSYILYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATTTGATGTAACGTaGGACGGACAACTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIEFDVT*DGQLLN
Trigger: ATTAAGAAGTTGTCCGTCCCACGTTACATCAAATTC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CAA 90 bp AAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATaGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: KSCILYYRAKRDVFR*DIAIWFGFCLFFLR
Trigger: CCTTAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTAAGTCTGGTTTACTGTaGCTCAGTAAAATGAGACTA +
Preference number: 2 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSKSGLL*LSKMRL
Trigger: TAGTCTCATTTTACTGAGTCACAGTAAACCAGACTT...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTTTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKALDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAACCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 2 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTAAGAAACACCACTaGGAATTTCATCACCAACAT +
Preference number: 2 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKLKKHH*EFHHQH
Trigger: ATGTTGGTGATGAAATTCCCAGTGGTGTTTCTTAAG...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR TCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAATTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTGAATTTGATGTAACGTaGGACGGACAACTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAEFDVT*DGQLLN
Trigger: ATTAAGAAGTTGTCCGTCCCACGTTACATCAAATTC...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR GCA 72 bp GCGTGCTGCAGGCGCGCGACACCGCAGGGTGGGCCCTaGCCTCCGTCGCGGGGGCTGCGGCCTGAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: ACCRRATPQGGP*PPSRGLRPESS
Trigger: GGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGGTGTCGCGCGCCTGCAGCACGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp CACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTaGCGCGGGCTTCCCTGGGCCCGGGTATGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: HAFRGPLDPGCR*RGLPWARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp GCCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGCGACACCGCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: AVGRSAFPATWT*GVLQARDTAGW
Trigger: CCACCCTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp TGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCCTGGGCCCGGGTATGG +
Preference number: 3 (lower is better)
Translates to: CLHAFRGPLDPG*RCRGLPWARVW
Trigger: CCATACCCGGGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp CCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGGGGGCCGCTTGTCATC +
Preference number: 3 (lower is better)
Translates to: PLDPGCRCRGLP*ARVWRRGPLVI
Trigger: GATGACAAGCGGCCCCCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp TGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCCGCGGGCTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: WSVGVSTPSGGP*IQAAAAAGFPG
Trigger: CCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp TCGAGCCAGCCAGCGTCCCCCAGGCGCGGACTGTCCTaGTCGCCCGCTGGCAGGGAGTTGGCGCTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: SSQPASPRRGLS*SPAGRELALLS
Trigger: ACTGAGCAGCGCCAACTCCCTGCCAGCGGGCGAGCAGGACAGTCCGCGCCTGGGGGACGCTGGCTGGCTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp GCTGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTaGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCC +
Preference number: 3 (lower is better)
Translates to: AALARLLGLPGP*VSPRLPGAPGS
Trigger: GGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp GTGACCTGCTGCTCTCGCTCGGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: VTCCSRSAAWPP*SVGVSTPSGGP
Trigger: GGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAGCAGGTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp CGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGG +
Preference number: 3 (lower is better)
Translates to: RRSGSSTAPTWP*AARLSLPPGRG
Trigger: CCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp CGTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGA +
Preference number: 3 (lower is better)
Translates to: RGRRSGSSTAPT*PWAARLSLPPG
Trigger: TCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp TCGCTGAGGTCGTGGGCGCCGCTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGCCGCTCGGCTTTCCCT +
Preference number: 3 (lower is better)
Translates to: SLRSWAPLRVKY*SDLAVGRSAFP
Trigger: AGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp GTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCGTCCCCCAGGCGCGGA +
Preference number: 3 (lower is better)
Translates to: VDRSSQICQRSL*QSSQPASPRRG
Trigger: TCCGCGCCTGGGGGACGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp CCCTCCCACTCCCATGGGGTCTTTGGCACTGAGGTGTaGCCCGGCTCTGCAGCCCGGCCACATCCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: PSHSHGVFGTEV*PGSAARPHPAH
Trigger: GTGAGCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCATGGGAGTGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 72 bp GGCTCTGCAGCCCGGCCACATCCAGCTCACTCTCGCTaGGGTCGTGGGCGCCGCTCAGGGTCAAGTACTGCT +
Preference number: 3 (lower is better)
Translates to: GSAARPHPAHSR*GRGRRSGSSTA
Trigger: AGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGGATGTGGCCGGGCTGCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR GCA 72 bp GCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAGTCGAGCCAGCCAGCG +
Preference number: 3 (lower is better)
Translates to: ASGLSVDRSSQI*QRSLCQSSQPA
Trigger: CGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp AGCCCGGCCACATCCAGCTCACTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTG +
Preference number: 3 (lower is better)
Translates to: SPATSSSLSLRS*APLRVKYCSDL
Trigger: CAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGGATGTGGCCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 72 bp TTGTCATCCCTCCCACTCCCATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGCAGCCCGGCCACATCC +
Preference number: 3 (lower is better)
Translates to: LSSLPLPWGLWH*GVARLCSPATS
Trigger: GGATGTGGCCGGGCTGCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCATGGGAGTGGGAGGGATGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp TTTTTCTGCGTGACCTGCTGCTCTCGCTCGGCTGCTTaGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCC +
Preference number: 3 (lower is better)
Translates to: FFCVTCCSRSAA*PPWSVGVSTPS
Trigger: GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCACATTGCCATCTGGTTaGGGTTCTGTTTGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAATLPSG*GSVCFS
Trigger: GGAAAAACAAACAGAACCCAAACCAGATGGCAATGT...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp GGGGGCTGCGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCAGGGACGTTTTTAGATaGGACATTGCCATCTGGTTT +
Preference number: 3 (lower is better)
Translates to: GGCGLSPPSPLRVAVQLCRDVFR*DIAIWF
Trigger: AAACCAGATGGCAATGTCCAATCTAAAAACGTCCCT...GCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp GGCTCCCCTGCCACCGAGGCCAATTTGGGGACAGGTTCCCTTGAGAAAGGGAGCTCTCCGCTGGAGGCCTaGTTGGAGTCTGTAGATGAA +
Preference number: 3 (lower is better)
Translates to: GSPATEANLGTGSLEKGSSPLEA*LESVDE
Trigger: TTCATCTACAGACTCCAACAAGGCCTCCAGCGGAGA...GCTCCCTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 72 bp GGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTaGTCAGATGTGACCCACCCACACGGAGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: GRVSLFVIQVCS*SDVTHPHGVGR
Trigger: CCTCCCCACTCCGTGTGGGTGGGTCACATCTGATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR CCA 72 bp CTCTTGCATAGCCAGCAGGGAGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGGGGAGATGTCTCCGCT +
Preference number: 3 (lower is better)
Translates to: LLHSQQGALRQH*GVVVIRGDVSA
Trigger: AGCGGAGACATCTCCCCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGCTCCCTGCTGGCTATGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp TCTGTAGTCAGCAAGCTGGAGACCGAGGAGAGCCGATaGCACACTTCTGGTCTGAAAGCCAGCGGTCTCAAG +
Preference number: 3 (lower is better)
Translates to: SVVSKLETEESR*HTSGLKASGLK
Trigger: CTTGAGACCGCTGGCTTTCAGACCAGAAGTGTGCCATCGGCTCTCCTCGGTCTCCAGCTTGCTGACTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR-3UTR CAA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCTCTCTTGTGTCACTTTaGAGAAGTGTGAAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSSLVSL*RSVKEE
Trigger: TTCTTCTTTCACACTTCTCAAAAGTGACACAAGAGA...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp ATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTaGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCT +
Preference number: 3 (lower is better)
Translates to: MRLFPRYLRLGV*PAGTLPANDWA
Trigger: AGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR CCA 72 bp CCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAA +
Preference number: 3 (lower is better)
Translates to: PKAGYAMEPYSQ*RGRECSTSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTGGTTTGGGTTCTGTTaGTTTTTCCTAAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSWFGFC*FFLRLA
Trigger: AGCCAGCCTTAGGAAAAACAAACAGAACCCAAACCA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACCGGGGCCGCGTCCTCTaGCATAGCCAGCAGGGAGCG +
Preference number: 3 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNRGRVL*HSQQGA
Trigger: CGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCCG...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR TCA 72 bp TGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGTTaGAAGTGGCAGAGCAGGTTTGTGACTCCCAGTATA +
Preference number: 3 (lower is better)
Translates to: WEAQSLTGDPAG*KWQSRFVTPSI
Trigger: TATACTGGGAGTCACAAACCTGCTCTGCCACTTTCAACCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR CCA 72 bp CATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTaGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: HSEFSQQEEMGL*EAQSLTGDPAG
Trigger: ACCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR GCA 72 bp GCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAACTGGATTTCTCTTGT +
Preference number: 3 (lower is better)
Translates to: AMEPYSQWRGRE*STSVGELDFSC
Trigger: ACAAGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAAGTGCTCTCTTGTCATaGGATACTAACACTATTTGG +
Preference number: 3 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPASALLS*DTNTIW
Trigger: CCAAATAGTGTTAGTATCCAATGACAAGAGAGCACT...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CAA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACCGCTGGAGGCCTTGTaGGAGTCTGTAGATGAATGC +
Preference number: 3 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILPLEAL*ESVDEC
Trigger: GCATTCATCTACAGACTCCAACAAGGCCTCCAGCGG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCACATTTCCTCAGCCTTaGGCACAATGTAAGTACAAA +
Preference number: 3 (lower is better)
Translates to: YSQWRGRECSTSVGELDFTFPQP*AQCKYK
Trigger: TTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGT...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGCCACCGAGGCCAATTaGGGGACAGGTTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNATEAN*GTGSLE
Trigger: CTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTACTCCCATGGGGTCTTaGGCACTGAGGTGTGGCCCG +
Preference number: 3 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKATPMGS*ALRCGP
Trigger: CGGGCCACACCTCAGTGCCAAAGACCCCATGGGAGT...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTaGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: NPNPVYIKFLGC*REKESAGNRSG
Trigger: GCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CAA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATTTTTAGATTGGACATaGCCATCTGGTTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILFLDWT*PSGLGS
Trigger: AGAACCCAAACCAGATGGCAATGTCCAATCTAAAAA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGACATTGCCATCTGGTTaGGGTTCTGTTTGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMTLPSG*GSVCFS
Trigger: GGAAAAACAAACAGAACCCAAACCAGATGGCAATGT...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAAACTTTCCCTTGACTTaGACGACGACAAGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: RNPLVHILEHSIESHCLVNFPLT*TTTSGP
Trigger: TGGGCCACTTGTCGTCGTCAAAGTCAAGGGAAAGTT...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCATCCGCTTTTTAATGTaGAATGCCAAGTTCCCCAGA +
Preference number: 3 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFIRFLM*NAKFPR
Trigger: TCTGGGGAACTTGGCATTCAACATTAAAAAGCGGAT...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR-3UTR CAA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTTTTAGATTGGACATaGCCATCTGGTTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFFLDWT*PSGLGS
Trigger: AGAACCCAAACCAGATGGCAATGTCCAATCTAAAAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTACAGGAGAACTTTCCCTaGACTTTGACGACGACAAGT +
Preference number: 3 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLQENFP*TLTTTS
Trigger: ACTTGTCGTCGTCAAAGTCAAGGGAAAGTTCTCCTG...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CCA 72 bp CTTGTTTTCTTTAGAAATGTAACAGCAGTAATTGGGTaGCACCTCAGACTAGCAAATATGCAACCCAAATCC +
Preference number: 3 (lower is better)
Translates to: LVFFRNVTAVIG*HLRLANMQPKS
Trigger: GGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACATTTCTAAAGAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CAA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGTCTCTTGTGTCACTTTaGAGAAGTGTGAAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMSLVSL*RSVKEE
Trigger: TTCTTCTTTCACACTTCTCAAAAGTGACACAAGAGA...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACACATTGCCATCTGGTTaGGGTTCTGTTTGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNTLPSG*GSVCFS
Trigger: GGAAAAACAAACAGAACCCAAACCAGATGGCAATGT...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CCA 72 bp GCTCTCTTGTCATTGGATACTAACACTATTTGGTTCTaGAAGGTTGTCTTCATACATATAGTAGGTTCAGCT +
Preference number: 3 (lower is better)
Translates to: ALLSLDTNTIWF*KVVFIHIVGSA
Trigger: AGCTGAACCTACTATATGTATGAAGACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
3UTR-3UTR CAA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATCTCTTGTGTCACTTTaGAGAAGTGTGAAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLSLVSL*RSVKEE
Trigger: TTCTTCTTTCACACTTCTCAAAAGTGACACAAGAGA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAACATTGCCATCTGGTTaGGGTTCTGTTTGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLTLPSG*GSVCFS
Trigger: GGAAAAACAAACAGAACCCAAACCAGATGGCAATGT...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACTTTTTAGATTGGACATaGCCATCTGGTTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNFLDWT*PSGLGS
Trigger: AGAACCCAAACCAGATGGCAATGTCCAATCTAAAAA...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CCA 72 bp TCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: SYIIEPRGTFLD*TLPSGLGSVCF
Trigger: AAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTTTTTTAGATTGGACATaGCCATCTGGTTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAFLDWT*PSGLGS
Trigger: AGAACCCAAACCAGATGGCAATGTCCAATCTAAAAA...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR-3UTR CAA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAATCTCTTGTGTCACTTTaGAGAAGTGTGAAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKSLVSL*RSVKEE
Trigger: TTCTTCTTTCACACTTCTCAAAAGTGACACAAGAGA...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCGGACGTGGGGCGTGCTaGAGGCGCGCGACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PWAARLSLPPGRGACCRRGRGAC*RRATPQ
Trigger: CTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCC...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGCCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLPLDPG*RCRGLP
Trigger: GGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGG...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GTGGGCGCCGCTCAGGGTCAAGTACTGCTCCGACCTGGCCGTGGGCCGCTCGGCCCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: VGAAQGQVLLRPGRGPLGPATWT*GVLQAR
Trigger: GCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGG...GCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAGCGGCGCCCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGCCCTGGGCCCGGGTATaGAGGCGGGGGCCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLPWARV*RRGPLV
Trigger: GACAAGCGGCCCCCGCCTCCATACCCGGGCCCAGGG...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCTGGGGACACCGAGCGTaGTGCGCCCGGGACCTCCAA +
Preference number: 4 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASWGHRA*CARDLQ
Trigger: TTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCCCCA...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGGACTCAGGCAAAGGTaGCAGGCGGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLGLRQR*QAGLAR
Trigger: CCGGGCCAGCCCCGCCTGGCACCTTTGCCTGAGTCC...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp GGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: GVSTPSGGPWIQAAAAAGGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...GCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCGGGGCCTCCCCCGGATaGACAGAGGATGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASGASPG*TEDAGS
Trigger: GCTTCCAGCATCCTCTGTTCATCCGGGGGAGGCCCC...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCTCTGCGGGGCTCCCCTaGCACCGAGGCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: PWAARLSLPPGRGACCRRSAGLP*HRGQFG
Trigger: CCCAAATTGGCCTCGGTGGCAGGGGAGCCCCGCAGA...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACGATCCAGGCTGCCGCTaGCGCGGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDDPGCR*RGLPWA
Trigger: GGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATC...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCCTGCTCTCGCTCGGCTaGTTGGCCTCCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASLLSLG*LASLVR
Trigger: ACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAG...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCCCTCCGCTGGGCTGCTaGGCCCACTCTTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAAPPLGC*AHSSDC
Trigger: GCAGTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGG...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGGGGCTGCGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCCCTGCACTCTCTCCTTaGCCCGGCGCCCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GGCGLSPPSPLRVAVQLCPALSP*PGARGC
Trigger: GCAACCTCGGGCGCCGGGGCAAGGAGAGAGTGCAGG...GCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCACTGCGTGCCCACGGTaGGATGGAATTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PWAARLSLPPGRGACCRRTACPR*DGIPGG
Trigger: GCCGCCGGGAATTCCATCCCACCGTGGGCACGCAGT...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDAPTWP*AARLSL
Trigger: CAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGC...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAASTAPT*PWAARL
Trigger: AAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACT...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGCTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLLSLRS*APLRVK
Trigger: CTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAG...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSPSGGP*IQAAAA
Trigger: GGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGG...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGGGGCTGCGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGTGCCCACGGTGGGATaGAATTCCCGGCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GGCGLSPPSPLRVAVQLCVPTVG*NSRRRS
Trigger: TGAGCGCCGCCGGGAATTCCATCCCACCGTGGGCAC...GCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCCCTGAGCCGGGCGCCTaGGCTGCGCCTCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTPEPGA*AAPPCT
Trigger: AGTGCAGGGAGGCGCAGCTCAGGCGCCCGGCTCAGG...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGCTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLLRVKY*SDLAVG
Trigger: GCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAG...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCTTCTGCGTGACCTGCTaGTCTCGCTCGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASFCVTC*SRSAAW
Trigger: CCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAA...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCCCGAGGTTGCGCGCCTaGCCTCCGCTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTPRLRA*PPLGCC
Trigger: GCAGCAGCCCAGCGGAGGCCAGGCGCGCAACCTCGG...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGGGGCTCCCCCGCGACTGTCGGGTaGGGACTGGAACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPESSEPPACRCPALRGSPATVG*GLELPL
Trigger: CAGAGGAAGTTCCAGTCCCCACCCGACAGTCGCGGG...GGAGCCCCGCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp GGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGAAAGCTGCCGGATGGTaGCTTCTCCTGCGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GCLASLVRGCLHAFRGPLKAAGW*LLLRGA
Trigger: AGCACCCCGCAGGAGAAGTCACCATCCGGCAGCTTT...CAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCGCCGGGCGCCTGAGCTaGGCCTCCCTGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRLGVWPAGTLPANDWARAGRLS*ASLHSL
Trigger: GAGAGAGTGCAGGGAGGCGCAGCTCAGGCGCCCGGC...GCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCGGACTCAGGCAAAGGTaGCAGGCGGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LRLGVWPAGTLPANDWARGLRQR*QAGLAR
Trigger: CCGGGCCAGCCCCGCCTGGCACCTTTGCCTGAGTCC...GCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTCCCTAGGAAAATGGGTCTaGGGACCTCCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SPRLPGAPGSRLPLPRASLGKWV*GPPAAA
Trigger: AGCGGCTGCAGGAGGTCCCCAGACCCATTTTCCTAG...GGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACGTAGCCTGGTGGCCCTaGGGGGCGGACCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYVAWWP*GADPGK
Trigger: CTTCCCGGGGTCCGCCCCCCAGGGCCACCAGGCTAC...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380718.1
3UTR CAA 72 bp GGGCCGCTTGTCATCCCTCCCACTCCCATGGGGTCTTaGGCACTGAGGTGTGGCCCGGCTCTGCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPLVIPPTPMGS*ALRCGPALQPG
Trigger: GCCGGGCTGCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCATGGGAGTGGGAGGGATGACAAGCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
3UTR CAA 72 bp CGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTaGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RAQTSVSGRASG*SVDRSSQICQR
Trigger: GCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: GVSTPSGGPWIQAAAAAGGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...GCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LRLGVWPAGTLPANDWARGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...GCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCCATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAAHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGATGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRCRGLP*ARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCA...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp GGGGGCTGCGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGCGLSPPSPLRVAVQLCKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...GCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCGCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACTCCCCCTTCCTAGCTaGGGCGGGAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAILPLPS*GGRRSA
Trigger: AGCGCTGCGTCTCCCGCCTCAGCTAGGAAGGGGGAG...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR TCA 90 bp CTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCACTCTCGGCTGGGAGTaGTGGGGAGTAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LRLGVWPAGTLPANDWARTLGWE*WGVEAA
Trigger: GGCCGCCTCTACTCCCCATCACTCCCAGCCGAGAGT...GCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CCGCAGGGTGGGCCCTGCCCTCCGTCGCGGGGGCTGCGGCCTGAGTCCTCCGAGTTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: PQGGPCPPSRGLRPESSEFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...CTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACTGGGCAGGCCTGCACTaGAGCCGGAAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDWAGLH*SRKHRT
Trigger: AGTTCTGTGCTTCCGGCTGCAGTGCAGGCCTGCCCA...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: GVSTPSGGPWIQAAAAAGFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...GCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PWAARLSLPPGRGACCRREPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGGGGCTCCCTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: RPESSEPPACRCPALRGSLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...GGAGCCCCGCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CGGCCTGAGTCCTCCGAGCCCCCTGCGTGTCGCTGTCCAGCTCTGCGGGGCTCCCGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RPESSEPPACRCPALRGSRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...GGAGCCCCGCAGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGACTCAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CCGCAGGGTGGGCCCTGCCCTCCGTCGCGGGGGCTGCGGCCTGAGTCCTCCGAGGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: PQGGPCPPSRGLRPESSEGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...CTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAGGGCAGGGCCCACCCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GVSTPSGGPWIQAAAAAGDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...GCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGACTGTGGAGCAGGCTCTaGGCGGACATCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRLWSRL*ADISAG
Trigger: CCCCGCCGAGATGTCCGCGCAGAGCCTGCTCCACAG...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCACTTCTCCTGCGGGGTaGTGGGTGTGGAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSTSPAG*WVWRRT
Trigger: CGTCCTTCTCCACACCCAGCACCCCGCAGGAGAAGT...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCGCTGCCGCGGGCGGAACCTGTCATTCCTaGGTCTTTGGATCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GVSTPSGGPWIQAAAAAGGTCHS*VFGSAF
Trigger: AAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCC...GCCCGCGGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp TGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTACTGCGTGCCCACGGTaGGATGGAATTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WSVACRDPPSQRLGSPYLTACPR*DGIPGG
Trigger: GCCGCCGGGAATTCCATCCCACCGTGGGCACGCAGT...AAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCACAGGAGAAGACGCTGTaGAGCAGGCTCTGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: RLGQGIGVVGRQELPDLPQEKTL*SRLCAD
Trigger: GTCCGCGCAGAGCCTGCTCCACAGCGTCTTCTCCTG...TGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCTCTTGGAGAAGCCCTTaGCCGAGGCCGCGCTACTTG +
Preference number: 4 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSSWRSP*PRPRYL
Trigger: CAAGTAGCGCGGCCTCGGCCAAGGGCTTCTCCAAGA...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACAAGCGCTTCGGCTACTaGCTGGCCCGGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYKRFGY*LARPGQ
Trigger: CTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGCGCTT...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GGCTCCCCTGCCACCGAGGCCAATTTGGGGACAGGTTCCCTTGAGAAAGGGAGCTGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GSPATEANLGTGSLEKGSCQRSL*QSSQPA
Trigger: CGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCA...GCTCCCTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCGGGACCTCCAAAGACTaGGTGCCCACGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFGTSKD*VPTVGW
Trigger: CCATCCCACCGTGGGCACGCAGTCTTTGGAGGTCCC...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCACTTCTCCTGCGGGGTaGTGGGTGTGGAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTTSPAG*WVWRRT
Trigger: CGTCCTTCTCCACACCCAGCACCCCGCAGGAGAAGT...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACGAGGGTCGCTTGTTTTaGCCAGCGCCTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYEGRLF*PAPAGQ
Trigger: CTGGCCAGCAGGCGCTGGCCAAAACAAGCGACCCTC...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCCCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TGGGTGCGGGCTCAGACCAGCGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: WVRAQTSVSGRASGLSVDCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...GTCGACCGACAACCCCGATGCCCTGCCCGAGACGCTGGTCTGAGCCCGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CCGTGGGCCGCTCGGCTTTCCCTGCCACCTGGACGTGGGGCGTGCTGCAGGCGCCTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PWAARLSLPPGRGACCRRLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...GCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGGCCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CGACAAGTGGCCCACCAGCATAAACTGCCCTGGCACTCTGTAAAGCTTCTCCGACCTGAGCCGGGCGCCTaGGCTGCGCCTCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: RQVAHQHKLPWHSVKLLRPEPGA*AAPPCT
Trigger: AGTGCAGGGAGGCGCAGCTCAGGCGCCCGGCTCAGG...TCGGAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTGGTGGGCCACTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAASHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTAAGGCTGCCTGGGCGTaGGCCCAGGGCGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSKAAWA*AQGAST
Trigger: GGTGGACGCGCCCTGGGCGCACGCCCAGGCAGCCTT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGGCCGGGTCCAGGCTaGGGGTCTGGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPAGPGPG*GSGAAS
Trigger: GGAAGCTGCGCCAGACCCGCAGCCTGGACCCGGCCC...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCGTTTTGGCCAGCGCCTaGTGGCCAGGCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFVLASA*WPGSSY
Trigger: GTAACTGGAGCCTGGCCAGCAGGCGCTGGCCAAAAC...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCTGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CCCTGGTCCGTGGGTGTCTCCACGCCTTCCGGGGGCCCCTGGATCCAGGCTGCCCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PWSVGVSTPSGGPWIQAAQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...GGCAGCCTGGATCCAGGGGCCCCCGGAAGGCGTGGAGACACCCACGGACCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSPSGGP*IQAAAA
Trigger: GGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGG...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCGCGGGGTGCTGGGTGTaGAGAAGGACGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFAGCWV*RRTSKE
Trigger: CTCTTTGCTCGTCCTTCTCCACACCCAGCACCCCGC...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR TCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGAGGCCATGCTCTTCTTaGGGCCGCCGCGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRRPCSS*GRRDPG
Trigger: CCCTGGGTCGCGGCGGCCTCAAGAAGAGCATGGCCT...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCTCCGTCGCGGGGGCTaGGGCCTGAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELLRRGG*GLSPPS
Trigger: GCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCACCTCCAAAGACTGCGTaGCCACGGTGGGATGGAATT +
Preference number: 4 (lower is better)
Translates to: RLGQGIGVVGRQELPDLPPPKTA*PRWDGI
Trigger: AATTCCATCCCACCGTGGGCACGCAGTCTTTGGAGG...TGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGGGCCAGGGAGAAGGCTaGCTGGGCGTGCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGGQGEG*LGVRPG
Trigger: CCCTGGGCGCACGCCCAGGCAGCCTTCTCCCTGGCC...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATAGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAIGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELPATWT*GVLQAR
Trigger: GCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELPSGGP*IQAAAA
Trigger: GGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GGCTCCCCTGCCACCGAGGCCAATTTGGGGACAGGTTCCCTTGAGAAAGGGAGCTGTCTTGCTGCAGTGTaGGGACACCGAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSPATEANLGTGSLEKGSCLAAV*GHRACC
Trigger: GCAGCACGCTCGGTGTCCCCACACTGCAGCAAGACA...GCTCCCTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCGCTGGCTCTGGATaGCCTCTAAGACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GVWPAGTLPANDWARHTFLAGSG*PLRLQQ
Trigger: TTGCTGGAGTCTTAGAGGCCATCCAGAGCCAGCGAG...GAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGAGGACGCTGGTGGCTTTaGGTCGGGAACCGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRGRWWL*VGNRKG
Trigger: TCCCTTTCGGTTCCCGACCCAAAGCCACCAGCGTCC...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGTCCTGGGGCAGCCCCTaGGCGCGAGCCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELSWGSP*ARALLR
Trigger: ACGGAGCAGGGCTCGCGCCCAGGGGCTGCCCCAGGA...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR TCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATAGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAIGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGGGGGCCTCCCCCGGATaGACAGAGGATGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRGASPG*TEDAGS
Trigger: GCTTCCAGCATCCTCTGTTCATCCGGGGGAGGCCCC...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LRLGVWPAGTLPANDWARRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...GCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGGTGTGGCCCGGCTCTaGAGCCCGGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELGVARL*SPATSS
Trigger: GCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACC...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTAGGCGCGGACTGTCCTaGTCGCCCGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSRRGLS*SPAGRE
Trigger: CTCCCTGCCAGCGGGCGAGCAGGACAGTCCGCGCCT...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTTGAGAAAGGGAGCAGGGCCCCGCTCTTAGGGAGCTGCTTTCAAAAATGTCTCAGGCGCGGACTGTCCTaGTCGCCCGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LEKGSRAPLLGSCFQKCLRRGLS*SPAGRE
Trigger: CTCCCTGCCAGCGGGCGAGCAGGACAGTCCGCGCCT...GAGACATTTTTGAAAGCAGCTCCCTAAGAGCGGGGCCCTGCTCCCTTTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACCTCCGCTGGGCTGCTaGGCCCACTCTTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQPPLGC*AHSSDC
Trigger: GCAGTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGG...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAATGGCCTCCGCTGGGCTaGTGCGCCCACTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQWPPLG*CAHSSD
Trigger: GTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGGCCA...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCTGTGGAGCAGGCTCTaGGCGGACATCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILLWSRL*ADISAG
Trigger: CCCCGCCGAGATGTCCGCGCAGAGCCTGCTCCACAG...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACGGATGAACAGAGGATaGTGGAAGCGCTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAIRMNRG*WKRFGY
Trigger: GTAGCCGAAGCGCTTCCAGCATCCTCTGTTCATCCG...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCGCTCACTGGAGATCCTaGAGGTTGAAAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSAHWRS*RLKVAE
Trigger: CTCTGCCACTTTCAACCTGCAGGATCTCCAGTGAGC...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GGCTCCCCTGCCACCGAGGCCAATTTGGGGACAGGTTCCCTTGAGAAAGGGAGCGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: GSPATEANLGTGSLEKGSGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...GCTCCCTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCTGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELAPTWP*AARLSL
Trigger: CAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGC...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTGAGGAATGCCGGGGCTaGAGCTGGGGCGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSEECRG*SWGGAR
Trigger: CCTGGCTCCGCCCCAGCTCCAGCCCCGGCATTCCTC...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR CCA 90 bp CGTCTCGGGCAGGGCATCGGGGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAATGAACAGAGGATGCTaGAAGCGCTTCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RLGQGIGVVGRQELPDLPMNRGC*KRFGYW
Trigger: CCAGTAGCCGAAGCGCTTCCAGCATCCTCTGTTCAT...TGGCAGATCTGGGAGCTCCTGTCGACCGACAACCCCGATGCCCTGCCCGAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTTTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: WSVACRDPPSQRLGSPYLLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...AAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATAGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAIEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAILAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGAATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTCTGCGGGGCTCCCCTaGCACCGAGGCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSSAGLP*HRGQFG
Trigger: CCCAAATTGGCCTCGGTGGCAGGGGAGCCCCGCAGA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAAGGACACCGAGCGTGCTaGGCCCGGGACCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQGHRAC*ARDLQR
Trigger: TCTTTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCC...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGTGGGGACACCGAGCGTaGTGCGCCCGGGACCTCCAA +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELWGHRA*CARDLQ
Trigger: TTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCCCCA...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGCCGGGCGCCTGAGCTaGGCCTCCCTGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFAGRLS*ASLHSL
Trigger: GAGAGAGTGCAGGGAGGCGCAGCTCAGGCGCCCGGC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: WSVACRDPPSQRLGSPYLFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...AAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: LGVWPAGTLPANDWARHTFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...GGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTGGCCTCCCTGGTCCGTaGGTGTCTCCACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSGLPGP*VSPRLP
Trigger: CGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCC...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGTGCCCACGGTGGGATaGAATTCCCGGCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPAVPTVG*NSRRRS
Trigger: TGAGCGCCGCCGGGAATTCCATCCCACCGTGGGCAC...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGTGTGCAAAGCGCCCCTaGCACAGCGTCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELCAKRP*HSVPLP
Trigger: CGGCAGCGGGACGCTGTGCCAGGGGCGCTTTGCACA...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR CCA 90 bp CCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGCCTACTGATTAGACCCACCCACACGGAGTaGGGAGGGCAGTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTHTEWGGQSASLSLLIRPTHTE*GGQSAS
Trigger: TGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG...TCTAATCAGTAGGCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCTCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFSDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTGTCCTCCGAGCCCCCTaGGTGTCGCTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSVLRAP*VSLSSS
Trigger: AGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGAC...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTCTGCTCTCGCTCGGCTaGTTGGCCTCCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSLLSLG*LASLVR
Trigger: ACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAG...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCAAAGGCTGCCTGGGCGTaGGCCCAGGGCGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSKAAWA*AQGAST
Trigger: GGTGGACGCGCCCTGGGCGCACGCCCAGGCAGCCTT...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCAGCAAGCTCCTCCTTaGGGCCCGAGGACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELQQAPP*GPRTVP
Trigger: CGGGACTGTCCTCGGGCCGCAAGGAGGAGCTTGCTG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCCTGATTTCTAAGGGTTaGGGTGGGGTCAAAGTTACG +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSLISKG*GGVKVT
Trigger: CGTAACTTTGACCCCACCGCAACCCTTAGAAATCAG...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380717.7
CDS-3UTR CCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATAATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAIISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELLSLRS*APLRVK
Trigger: CTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCCCTGGGCCCGGGTATaGAGGCGGGGGCCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTPWARV*RRGPLV
Trigger: GACAAGCGGCCCCCGCCTCCATACCCGGGCCCAGGG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSAAWPP*SVGVST
Trigger: CGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGC...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGTGTCTTGCTGCAGTGTaGGGACACCGAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRCLAAV*GHRACC
Trigger: GCAGCACGCTCGGTGTCCCCACACTGCAGCAAGACA...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACTCCCTGGACGCTGGTaGCTTTGGGTCGGGAACCGA +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQLPGRW*LWVGNR
Trigger: TCGGTTCCCGACCCAAAGCCACCAGCGTCCAGGGAG...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCACTCCTCCTCCCTCCCTaGACGCTGGTGGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPALLLPP*TLVALG
Trigger: ACCCAAAGCCACCAGCGTCCAGGGAGGGAGGAGGAG...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGTCCAGGCTGCGGGTCTaGCGCAGCTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILSRLRV*RSFLLE
Trigger: CTCCAAGAGGAAGCTGCGCCAGACCCGCAGCCTGGA...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTGTAACAGCAGTAATTaGGTGGCACCTCAGACTAGC +
Preference number: 4 (lower is better)
Translates to: ECGLQGPSQPTTGLAIPSCNSSN*VAPQTS
Trigger: GCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA...GGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAAACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GGCTCCCCTGCCACCGAGGCCAATTTGGGGACAGGTTCCCTTGAGAAAGGGAGCCCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GSPATEANLGTGSLEKGSPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...GCTCCCTTTCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGGCAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACTCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGATCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRSDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGAGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGTCCTCCGAGCCCCCTaGGTGTCGCTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFVLRAP*VSLSSS
Trigger: AGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGAC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTTGAGAAAGGGAGCAGGGCCCCGCTCTTAGGGAGCTGCTTTCAAAAATGTCTCGGGACCTCCAAAGACTaGGTGCCCACGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LEKGSRAPLLGSCFQKCLGTSKD*VPTVGW
Trigger: CCATCCCACCGTGGGCACGCAGTCTTTGGAGGTCCC...GAGACATTTTTGAAAGCAGCTCCCTAAGAGCGGGGCCCTGCTCCCTTTCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGGTTTTGGCCAGCGCCTaGTGGCCAGGCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILVLASA*WPGSSY
Trigger: GTAACTGGAGCCTGGCCAGCAGGCGCTGGCCAAAAC...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp TGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTCCTCTTCTGGCTCCTCTGGGCATaGGTTTATTTCCCAGATATC +
Preference number: 4 (lower is better)
Translates to: WPAGTLPANDWARHTFLFWLLWA*VYFPDI
Trigger: GATATCTGGGAAATAAACGCATGCCCAGAGGAGCCA...GAAGAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGCTTTCCCTGCCACCTaGACGTGGGGCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFAFPAT*TWGVLQ
Trigger: CTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFSTAPT*PWAARL
Trigger: AAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACT...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CAACGACTGGGCTCGCCATACCTTCCTCTTCCTAGAGTAGGCGTTCAGCAGGTAGGACGCTGGTGGCTTTaGGTCGGGAACCGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QRLGSPYLPLPRVGVQQVGRWWL*VGNRKG
Trigger: TCCCTTTCGGTTCCCGACCCAAAGCCACCAGCGTCC...TACCTGCTGAACGCCTACTCTAGGAAGAGGAAGGTATGGCGAGCCCAGTCGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGCTTCGGCTACTGGCTaGCCCGGCCAGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFASATG*PGQDRR
Trigger: CCTTCTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCCCGCGACTGTCGGGTaGGGACTGGAACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELPATVG*GLELPL
Trigger: CAGAGGAAGTTCCAGTCCCCACCCGACAGTCGCGGG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACTCCCAGCCAACGACTaGGCTCGCCATACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQLPAND*ARHTFL
Trigger: GAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAG...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCACTGAGACTTGGAGTGTaGCCTGCAGGGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPALRLGV*PAGTLP
Trigger: TGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATATCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: DLECGLQGPSQPTTGLAISSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...TATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GGGACAGGTTCCCTTGAGAAAGGGAGCAGGGCCCCGCTCTTAGGGAGCTGCTTTGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GTGSLEKGSRAPLLGSCFARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...AAAGCAGCTCCCTAAGAGCGGGGCCCTGCTCCCTTTCTCAAGGGAACCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: WSVACRDPPSQRLGSPYLGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...AAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCAGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCCGCTCGGCTTTCCCTaGCACCTGGACGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTPLGFP*HLDVGR
Trigger: ACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCCCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFPLDPG*RCRGLP
Trigger: GGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGG...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSRSSQI*QRSLCQ
Trigger: CTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCT...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAAAGGCTGCCTGGGCGTaGGCCCAGGGCGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILKAAWA*AQGAST
Trigger: GGTGGACGCGCCCTGGGCGCACGCCCAGGCAGCCTT...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GGTTGTCGGTCGACAGGAGCTCCCAGATCTGCCAGCGCTCTCTCTGCCAGTCGACTGATTTCTAAGGGTTaGGGTGGGGTCAAAGTTACG +
Preference number: 4 (lower is better)
Translates to: GCRSTGAPRSASALSASRLISKG*GGVKVT
Trigger: CGTAACTTTGACCCCACCGCAACCCTTAGAAATCAG...TCGACTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCTGTCGACCGACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGCCTACTGATTAGAAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTHTEWGGQSASLSLLIRSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...TCTAATCAGTAGGCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCAGGGAGAAGGCTGCCTaGGCGTGCGCCCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQIREKAA*ACAQGA
Trigger: CGCGCCCTGGGCGCACGCCCAGGCAGCCTTCTCCCT...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CAAAAATGTCTCCAGAGGAACCTGTCATTCCTGGGTCTTTGGATCCGCTTTTTAAGGGAGAAGGCTGCCTaGGCGTGCGCCCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QKCLQRNLSFLGLWIRFLREKAA*ACAQGA
Trigger: CGCGCCCTGGGCGCACGCCCAGGCAGCCTTCTCCCT...TAAAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCCTCTGGAGACATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACTAGGAAAATGGGTCTaGGGACCTCCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQLGKWV*GPPAAA
Trigger: AGCGGCTGCAGGAGGTCCCCAGACCCATTTTCCTAG...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCCCTCCCTGGACGCTaGTGGCTTTGGGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFSLPGR*WLWVGN
Trigger: GTTCCCGACCCAAAGCCACCAGCGTCCAGGGAGGGA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGATCTTTCCCAAGCCTTGGTCCAGGAGAACTTTCCCTTGACTTTGACGACGAAGCGCTTCGGCTACTaGCTGGCCCGGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TDLSQALVQENFPLTLTTKRFGY*LARPGQ
Trigger: CTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGCGCTT...CGTCGTCAAAGTCAAGGGAAAGTTCTCCTGGACCAAGGCTTGGGAAAGATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCGCGACTGTCGGGTaGGGACTGGAACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPPATVG*GLELPL
Trigger: CAGAGGAAGTTCCAGTCCCCACCCGACAGTCGCGGG...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACACAGCAGTAATTGGGTaGCACCTCAGACTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYTAVIG*HLRLAN
Trigger: ATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLIGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp CAACGACTGGGCTCGCCATACCTTCCTCTTCCTAGAGTAGGCGTTCAGCAGGTAAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRLGSPYLPLPRVGVQQVKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...TACCTGCTGAACGCCTACTCTAGGAAGAGGAAGGTATGGCGAGCCCAGTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPAKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCTCTGCGGGGCTCCCCTaGCACCGAGGCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTSAGLP*HRGQFG
Trigger: CCCAAATTGGCCTCGGTGGCAGGGGAGCCCCGCAGA...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCGTCCTCCGAGCCCCCTaGGTGTCGCTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTVLRAP*VSLSSS
Trigger: AGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGAC...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCTGCTCTCGCTCGGCTaGTTGGCCTCCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTLLSLG*LASLVR
Trigger: ACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTTCTGCGTGACCTGCTaGTCTCGCTCGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFFCVTC*SRSAAW
Trigger: CCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAAGCCCACTCTTCCGACTaGAGAGGCTCAAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQAHSSD*RGSRVV
Trigger: AACAACCCTTGAGCCTCTGCAGTCGGAAGAGTGGGC...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTCCTGGGCGCGAGCCCTaGTCCGTGCGTGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFPGREP*SVRAEC
Trigger: GCACTCGGCACGCACGGAGCAGGGCTCGCGCCCAGG...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCATGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPACHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTAAWPP*SVGVST
Trigger: CGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGC...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TGCTCTCGCTCGGCTGCTTGGCCTCCCTGGTCCGTGGGTGTCTCCACGCCTTCCGAATTTGATGTAACGTaGGACGGACAACTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: CSRSAAWPPWSVGVSTPSEFDVT*DGQLLN
Trigger: ATTAAGAAGTTGTCCGTCCCACGTTACATCAAATTC...GGAAGGCGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTGCGCCTGGCCTCCGCTaGGCTGCTGCGCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTAPGLR*AAAPTL
Trigger: AAGAGTGGGCGCAGCAGCCCAGCGGAGGCCAGGCGC...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGCGCCTCCGGGAGGAGTaGCGCGCCTTGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWRLREE*RALGSA
Trigger: GGCTGAGCCCAAGGCGCGCCACTCCTCCCGGAGGCG...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR CCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTTTGGCCAGCGCCTGCTaGCCAGGCTCCAGTTACCTT +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPLASAC*PGSSYL
Trigger: AAGGTAACTGGAGCCTGGCCAGCAGGCGCTGGCCAA...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp ACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACAAGTTCCTAGGATGCTaGAGGGAAAAAGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: TWSVACRDPPSQRLGSPYKFLGC*REKESA
Trigger: AGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTT...GTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAAGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CGACAAGTGGCCCACCAGCATAAACTGCCCTGGCACTCTGTAAAGCTTCTCCGAGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQVAHQHKLPWHSVKLLREVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...TCGGAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTGGTGGGCCACTTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp CCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGCCTACTGATTAGAGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PTHTEWGGQSASLSLLIRARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...TCTAATCAGTAGGCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTCGAGGCCGCGCTACTTaGAGCGGGCGAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSRGRAT*SGRGTG
Trigger: TCCTGTTCCTCGCCCGCTTCAAGTAGCGCGGCCTCG...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR TCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTACATGCTGTTCCAGGTaGAATCACCCGCGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSTCCSR*NHPRSA
Trigger: TGCACTACGCGGGTGATTTCACCTGGAACAGCATGT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp GGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLKASGLKMQEELMFQFKGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...CTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTTCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCTCCGTCGCGGGGGCTaGGGCCTGAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFLRRGG*GLSPPS
Trigger: GCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAACTCCGTCGCGGGGGCTaGGGCCTGAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIELRRGG*GLSPPS
Trigger: GCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAG...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGGACGTGGGGCGTGCTaGAGGCGCGCGACACCGCAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIGRGAC*RRATPQ
Trigger: CTGCGGTGTCGCGCGCCTGCAGCACGCCCCACGTCC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIPLDPG*RCRGLP
Trigger: GGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCTGGGGACACCGAGCGTaGTGCGCCCGGGACCTCCAA +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQIWGHRA*CARDLQ
Trigger: TTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCCCCA...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGGCCAGGGAGAAGGCTaGCTGGGCGTGCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFGQGEG*LGVRPG
Trigger: CCCTGGGCGCACGCCCAGGCAGCCTTCTCCCTGGCC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTTTCCCAGCTCCAGCCTaGCAGCGCCACTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSFPAPA*QRHSPF
Trigger: GAAGGGGGAGTGGCGCTGGCAGGCTGGAGCTGGGAA...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAACGACTGGGCTCGCCATACCTTTCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WSVACRDPPSQRLGSPYLSFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...AAGGTATGGCGAGCCCAGTCGTTGGCTGGGAGGGTCCCTGCAGGCCACACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGCCTACTGATTAGAGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PTHTEWGGQSASLSLLIRACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...TCTAATCAGTAGGCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCCCAGCCAAGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: ISQISETWSVACRDPPSQALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...TTGGCTGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGCCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMPATWT*GVLQAR
Trigger: GCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGG...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIECRGLP*ARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCA...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSICRGLP*ARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACCGAGGTTGCGCGCCTaGCCTCCGCTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIPRLRA*PPLGCC
Trigger: GCAGCAGCCCAGCGGAGGCCAGGCGCGCAACCTCGG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTAGGTCAGGCGCTCGCTaGGTTCCCAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSRSGAR*VPSSSL
Trigger: CAGGCTGGAGCTGGGAACCCAGCGAGCGCCTGACCT...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACAGGAGAAGACGCTGTaGAGCAGGCTCTGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSQEKTL*SRLCAD
Trigger: GTCCGCGCAGAGCCTGCTCCACAGCGTCTTCTCCTG...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGTAGCCTGGTGGCCCTaGGGGGCGGACCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIVAWWP*GADPGK
Trigger: CTTCCCGGGGTCCGCCCCCCAGGGCCACCAGGCTAC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGTTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTCTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGACCTGAGCCGGGCGCCTaGGCTGCGCCTCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRPEPGA*AAPPCT
Trigger: AGTGCAGGGAGGCGCAGCTCAGGCGCCCGGCTCAGG...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCAAAAGCTGCCGGATGGTaGCTTCTCCTGCGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSKAAGW*LLLRGA
Trigger: AGCACCCCGCAGGAGAAGTCACCATCCGGCAGCTTT...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR TCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTAGGCCATGCTCTTCTTaGGGCCGCCGCGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFRPCSS*GRRDPG
Trigger: CCCTGGGTCGCGGCGGCCTCAAGAAGAGCATGGCCT...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTACATGCTGTTCCAGGTaGAATCACCCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSTCCSR*NHPRIS
Trigger: GGAAATCCGAGGGTGATTTCACCTGGAACAGCATGT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR TCA 90 bp CCCACCCACACGGAGTGGGGAGGGCAGTCTGCTTCACTTAGCCTACTGATTAGAACATGCTGTTCCAGGTaGAATCACCCTTTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PTHTEWGGQSASLSLLIRTCCSR*NHPFVA
Trigger: GGCAACAAAAGGGTGATTTCACCTGGAACAGCATGT...TCTAATCAGTAGGCTAAGTGAAGCAGACTGCCCTCCCCACTCCGTGTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGCTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGTTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRLSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCAGGCGCGGACTGTCCTaGTCGCCCGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFRRGLS*SPAGRE
Trigger: CTCCCTGCCAGCGGGCGAGCAGGACAGTCCGCGCCT...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAAGGCGCGGACTGTCCTaGTCGCCCGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIRRGLS*SPAGRE
Trigger: CTCCCTGCCAGCGGGCGAGCAGGACAGTCCGCGCCT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTGCGGGGTCTCTGTCTTaGTGCAGTGTGGGGACACCG +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSAGSLS*CSVGTP
Trigger: CGGTGTCCCCACACTGCAGCAAGACAGAGACCCCGC...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGTGGCCTCCGCTGGGCTaGTGCGCCCACTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWWPPLG*CAHSSD
Trigger: GTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGGCCA...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTGCACTCTCTCCTTaGCCCGGCGCCCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVPALSP*PGARGC
Trigger: GCAACCTCGGGCGCCGGGGCAAGGAGAGAGTGCAGG...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAGGCCAGGGAGAAGGCTaGCTGGGCGTGCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLGQGEG*LGVRPG
Trigger: CCCTGGGCGCACGCCCAGGCAGCCTTCTCCCTGGCC...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCCAGCAAGCTCCTCCTTaGGGCCCGAGGACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFQQAPP*GPRTVP
Trigger: CGGGACTGTCCTCGGGCCGCAAGGAGGAGCTTGCTG...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CAAAAATGTCTCCAGAGGAACCTGTCATTCCTGGGTCTTTGGATCCGCTTTTTATTCCCAGCTCCAGCCTaGCAGCGCCACTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QKCLQRNLSFLGLWIRFLFPAPA*QRHSPF
Trigger: GAAGGGGGAGTGGCGCTGGCAGGCTGGAGCTGGGAA...TAAAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCCTCTGGAGACATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAGGGCCGGGTCCAGGCTaGGGGTCTGGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRGPGPG*GSGAAS
Trigger: GGAAGCTGCGCCAGACCCGCAGCCTGGACCCGGCCC...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CAACGACTGGGCTCGCCATACCTTCCTCTTCCTAGAGTAGGCGTTCAGCAGGTAATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: QRLGSPYLPLPRVGVQQVISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...TACCTGCTGAACGCCTACTCTAGGAAGAGGAAGGTATGGCGAGCCCAGTCGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLIGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGACCCTGGGCCCGGGTATaGAGGCGGGGGCCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRPWARV*RRGPLV
Trigger: GACAAGCGGCCCCCGCCTCCATACCCGGGCCCAGGG...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTCTCGCTCGGCTGCTTaGCCTCCCTGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFSRSAA*PPWSVG
Trigger: ACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGCGCCTGGCCTCCGCTaGGCTGCTGCGCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFAPGLR*AAAPTL
Trigger: AAGAGTGGGCGCAGCAGCCCAGCGGAGGCCAGGCGC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAAGGGAGAAGGCTGCCTaGGCGTGCGCCCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRREKAA*ACAQGA
Trigger: CGCGCCCTGGGCGCACGCCCAGGCAGCCTTCTCCCT...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCAGGTCAGGCGCTCGCTaGGTTCCCAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFRSGAR*VPSSSL
Trigger: CAGGCTGGAGCTGGGAACCCAGCGAGCGCCTGACCT...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCGCTTCGGCTACTGGCTaGCCCGGCCAGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQIASATG*PGQDRR
Trigger: CCTTCTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGC...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTATGAACAGAGGATGCTaGAAGCGCTTCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSMNRGC*KRFGYW
Trigger: CCAGTAGCCGAAGCGCTTCCAGCATCCTCTGTTCAT...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGAGCTCAATCGCTCACTaGAGATCCTGCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRSSIAH*RSCRLK
Trigger: TTTCAACCTGCAGGATCTCCAGTGAGCGATTGAGCT...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGCCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCCTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGATCGAAAGGCTCCTCTaGCAGATCTTTCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELIERLL*QIFPKP
Trigger: AGGCTTGGGAAAGATCTGTCAGAGGAGCCTTTCGAT...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAACTCCCCCTTCCTAGCTaGGGCGGGAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIELPLPS*GGRRSA
Trigger: AGCGCTGCGTCTCCCGCCTCAGCTAGGAAGGGGGAG...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGTTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CAACGACTGGGCTCGCCATACCTTCCTCTTCCTAGAGTAGGCGTTCAGCAGGTAAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: QRLGSPYLPLPRVGVQQVSHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...TACCTGCTGAACGCCTACTCTAGGAAGAGGAAGGTATGGCGAGCCCAGTCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCCGCTCGGCTTTCCCTaGCACCTGGACGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIPLGFP*HLDVGR
Trigger: ACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLRVKY*SDLAVG
Trigger: GCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACGATCCAGGCTGCCGCTaGCGCGGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDDPGCR*RGLPWA
Trigger: GGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATC...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGGGACCTCCAAAGACTaGGTGCCCACGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFGTSKD*VPTVGW
Trigger: CCATCCCACCGTGGGCACGCAGTCTTTGGAGGTCCC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGGACACCGAGCGTGCTaGGCCCGGGACCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFGHRAC*ARDLQR
Trigger: TCTTTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGCGGGGTCTCTGTCTTaGTGCAGTGTGGGGACACCG +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILAGSLS*CSVGTP
Trigger: CGGTGTCCCCACACTGCAGCAAGACAGAGACCCCGC...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGCGGGGTCTCTGTCTTaGTGCAGTGTGGGGACACCG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFAGSLS*CSVGTP
Trigger: CGGTGTCCCCACACTGCAGCAAGACAGAGACCCCGC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGCAGCAAGCTCCTCCTTaGGGCCCGAGGACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRQQAPP*GPRTVP
Trigger: CGGGACTGTCCTCGGGCCGCAAGGAGGAGCTTGCTG...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGAGACGCAGCGCTCCTaGTCGCTGGCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFETQRS*SLALDG
Trigger: GCCATCCAGAGCCAGCGAGCAGGAGCGCTGCGTCTC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAGGACTCAGGCAAAGGTaGCAGGCGGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLGLRQR*QAGLAR
Trigger: CCGGGCCAGCCCCGCCTGGCACCTTTGCCTGAGTCC...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGGGCCGGGTCCAGGCTaGGGGTCTGGCGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNGPGPG*GSGAAS
Trigger: GGAAGCTGCGCCAGACCCGCAGCCTGGACCCGGCCC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGTGGCTCCTCTGGGCATaGGTTTATTTCCCAGATATC +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILWLLWA*VYFPDI
Trigger: GATATCTGGGAAATAAACGCATGCCCAGAGGAGCCA...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAGGAATATCCCCACTGTCTaGAGGCCATGTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: AGGNGTLGSSIAHWRSCRNIPTV*RPCFSR
Trigger: CCTAGAAAAACATGGCCTCCAGACAGTGGGGATATT...CCTGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp AAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTCATGCAGAAGGTGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: KSKGRKSPMSQLKQSCRRCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...CCTTCTGCATGACTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWSTAPT*PWAARL
Trigger: AAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACT...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGGCCTCCCTGGTCCGTaGGTGTCTCCACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIGLPGP*VSPRLP
Trigger: CGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGTCCTGCTCGCCCGCTaGCAGGGAGTTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIVLLAR*QGVGAA
Trigger: AGCAGCGCCAACTCCCTGCCAGCGGGCGAGCAGGAC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAGTCCTGCTCGCCCGCTaGCAGGGAGTTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIEVLLAR*QGVGAA
Trigger: AGCAGCGCCAACTCCCTGCCAGCGGGCGAGCAGGAC...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGTCCTGCTCGCCCGCTaGCAGGGAGTTGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFVLLAR*QGVGAA
Trigger: AGCAGCGCCAACTCCCTGCCAGCGGGCGAGCAGGAC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTGCTCAGCGCTCTCCGTaGAGGAGGGAGCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTAQRSP*RRELRR
Trigger: TCTCCTGAGCTCCCTCCTCCACGGAGAGCGCTGAGC...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACTCCCTGGACGCTGGTaGCTTTGGGTCGGGAACCGA +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLPGRW*LWVGNR
Trigger: TCGGTTCCCGACCCAAAGCCACCAGCGTCCAGGGAG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTCCCTCCCTGGACGCTaGTGGCTTTGGGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFSLPGR*WLWVGN
Trigger: GTTCCCGACCCAAAGCCACCAGCGTCCAGGGAGGGA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATCCAGGCTGCGGGTCTaGCGCAGCTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILSRLRV*RSFLLE
Trigger: CTCCAAGAGGAAGCTGCGCCAGACCCGCAGCCTGGA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGTAGCCTGGTGGCCCTaGGGGGCGGACCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNVAWWP*GADPGK
Trigger: CTTCCCGGGGTCCGCCCCCCAGGGCCACCAGGCTAC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAAGGAGTGGCGCGCCTTaGGCTCAGCCTGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIRSGAP*AQPGVT
Trigger: CGTGACCCCAGGCTGAGCCCAAGGCGCGCCACTCCT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTCTCCCAGCCAACGACTaGGCTCGCCATACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSLPAND*ARHTFL
Trigger: GAGGAAGGTATGGCGAGCCCAGTCGTTGGCTGGGAG...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTCTGAGACTTGGAGTGTaGCCTGCAGGGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSLRLGV*PAGTLP
Trigger: TGGGAGGGTCCCTGCAGGCCACACTCCAAGTCTCAG...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTTCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGTCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: HSRRKWDSGKLNRSLEILSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...CAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIWGLWH*GVARLC
Trigger: GCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCACTCTCGGCTGGGAGTaGTGGGGAGTAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRITLGWE*WGVEAA
Trigger: GGCCGCCTCTACTCCCCATCACTCCCAGCCGAGAGT...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGGGGCCTCCCCCGGATaGACAGAGGATGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIGASPG*TEDAGS
Trigger: GCTTCCAGCATCCTCTGTTCATCCGGGGGAGGCCCC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTCTCCGTCGCGGGGGCTaGGGCCTGAGTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKALRRGG*GLSPPS
Trigger: GCTCGGAGGACTCAGGCCGCAGCCCCCGCGACGGAG...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACCGCTCGGCTTTCCCTaGCACCTGGACGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLPLGFP*HLDVGR
Trigger: ACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGATCCAGGCTGCCGCTaGCGCGGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIDPGCR*RGLPWA
Trigger: GGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGATCCAGGCTGCCGCTaGCGCGGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLDPGCR*RGLPWA
Trigger: GGCCCAGGGAAGCCCGCGGCAGCGGCAGCCTGGATC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTCCCCTGGATCCAGGCTaGCGCTGCCGCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAPLDPG*RCRGLP
Trigger: GGGAAGCCCGCGGCAGCGGCAGCCTGGATCCAGGGG...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCTTTTTCTGCGTGACCTaGTGCTCTCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTFFCVT*CSRSAA
Trigger: AGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSICQRSL*QSSQPA
Trigger: CGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRICQRSL*QSSQPA
Trigger: CGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGGACACCGAGCGTGCTaGGCCCGGGACCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIGHRAC*ARDLQR
Trigger: TCTTTGGAGGTCCCGGGCGCAGCACGCTCGGTGTCC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATGGCCTCCGCTGGGCTaGTGCGCCCACTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRWPPLG*CAHSSD
Trigger: GTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGGCCA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAGCCGGGCGCCTGAGCTaGGCCTCCCTGCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKAGRLS*ASLHSL
Trigger: GAGAGAGTGCAGGGAGGCGCAGCTCAGGCGCCCGGC...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGAGACGCAGCGCTCCTaGTCGCTGGCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLEETQRS*SLALDG
Trigger: GCCATCCAGAGCCAGCGAGCAGGAGCGCTGCGTCTC...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGAGACGCAGCGCTCCTaGTCGCTGGCTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFETQRS*SLALDG
Trigger: GCCATCCAGAGCCAGCGAGCAGGAGCGCTGCGTCTC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGCGTGCCGAGTGCTGTaGAAAGCGCCCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFACRVL*KAPLAQ
Trigger: CTGTGCCAGGGGCGCTTTGCACAGCACTCGGCACGC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACCCGCGGTACACCGGGTaGCCCATGTCGCCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDPRYTG*PMSPPG
Trigger: TCCCGGAGGCGACATGGGGCACCCGGTGTACCGCGG...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACCACACCATGCCACATaGAACAAGAGGAGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSPHHAT*NKRRVA
Trigger: AGCGACCCTCCTCTTGTTGCATGTGGCATGGTGTGG...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GGCTACGCAATGGAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTAATATCCCCACTGTCTaGAGGCCATGTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GYAMEPYSQWRGRECSTSNIPTV*RPCFSR
Trigger: CCTAGAAAAACATGGCCTCCAGACAGTGGGGATATT...AGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTCCATTGCGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTCATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTCATGCAGAACATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSPKAGKVQCPSSSSHAEHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...TTCTGCATGACTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLIFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp AAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTCATGCAGAAGGGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: KSKGRKSPMSQLKQSCRRALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...CCTTCTGCATGACTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCCACCGAGGCCAATTTaGGGACAGGTTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTPPRPI*GQVPLR
Trigger: TCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTACCTGCCACCTGGACGTaGGGCGTGCTGCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLPATWT*GVLQAR
Trigger: GCGCGCCTGCAGCACGCCCCACGTCCAGGTGGCAGG...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGCTTTCCCTGCCACCTaGACGTGGGGCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIAFPAT*TWGVLQ
Trigger: CTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGCTTTCCCTGCCACCTaGACGTGGGGCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIAFPAT*TWGVLQ
Trigger: CTGCAGCACGCCCCACGTCCAGGTGGCAGGGAAAGC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDAPTWP*AARLSL
Trigger: CAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGC...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCAGTACTGCTCCGACCTaGCCGTGGGCCGCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRISTAPT*PWAARL
Trigger: AAGCCGAGCGGCCCACGGCCAGGTCGGAGCAGTACT...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSILSLRS*APLRVK
Trigger: CTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTTGCCGCGGGCTTCCCTaGGCCCGGGTATGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYICRGLP*ARVWRR
Trigger: CCGCCTCCATACCCGGGCCCAGGGAAGCCCGCGGCA...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAACCTTCCGGGGGCCCCTaGATCCAGGCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKPSGGP*IQAAAA
Trigger: GGCAGCGGCAGCCTGGATCCAGGGGCCCCCGGAAGG...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTCGCAGCCCAGCCTTaGGCCCAGGGCAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQFAAQP*AQGRRG
Trigger: TCCGCGTCTGCCCTGGGCCCAAGGCTGGGCTGCGAA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGCTCAGCGCTCTCCGTaGAGGAGGGAGCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFAQRSP*RRELRR
Trigger: TCTCCTGAGCTCCCTCCTCCACGGAGAGCGCTGAGC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGTGCCCACGGTGGGATaGAATTCCCGGCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFVPTVG*NSRRRS
Trigger: TGAGCGCCGCCGGGAATTCCATCCCACCGTGGGCAC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTCCGAGGTTGCGCGCCTaGCCTCCGCTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAPRLRA*PPLGCC
Trigger: GCAGCAGCCCAGCGGAGGCCAGGCGCGCAACCTCGG...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGTCCCTCCCTGGACGCTaGTGGCTTTGGGTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRSLPGR*WLWVGN
Trigger: GTTCCCGACCCAAAGCCACCAGCGTCCAGGGAGGGA...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGCTCCTCCTCCCTCCCTaGACGCTGGTGGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWLLLPP*TLVALG
Trigger: ACCCAAAGCCACCAGCGTCCAGGGAGGGAGGAGGAG...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGCAGGAGAAGACGCTGTaGAGCAGGCTCTGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWQEKTL*SRLCAD
Trigger: GTCCGCGCAGAGCCTGCTCCACAGCGTCTTCTCCTG...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAGCGCTTCGGCTACTaGCTGGCCCGGCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFKRFGY*LARPGQ
Trigger: CTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGCGCTT...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTCTGTCGGGTGGGGACTaGAACTTCCTCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTLSGGD*NFLCWS
Trigger: GCTCCAGCAGAGGAAGTTCCAGTCCCCACCCGACAG...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGGAGGGTCGCTTGTTTTaGCCAGCGCCTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNREGRLF*PAPAGQ
Trigger: CTGGCCAGCAGGCGCTGGCCAAAACAAGCGACCCTC...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAACAGCAGTAATTGGGTaGCACCTCAGACTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPATAVIG*HLRLAN
Trigger: ATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGCCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGLKMQEELMFQFKSKGRPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...CCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGTCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGTCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCCGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTATCGAAAGGCTCCTCTaGCAGATCTTTCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGIERLL*QIFPKP
Trigger: AGGCTTGGGAAAGATCTGTCAGAGGAGCCTTTCGAT...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLWGLWH*GVARLC
Trigger: GCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRWGLWH*GVARLC
Trigger: GCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAGGCAGCTCGCCACTaGTACCGGGTCTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFKAARH*YRVSWG
Trigger: TCCCCAGGAGACCCGGTATCAGTGGCGAGCTGCCTT...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACGAGGCCGCGCTACTTaGAGCGGGCGAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLRGRAT*SGRGTG
Trigger: TCCTGTTCCTCGCCCGCTTCAAGTAGCGCGGCCTCG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAACTCTCGGCTGGGAGTaGTGGGGAGTAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRTLGWE*WGVEAA
Trigger: GGCCGCCTCTACTCCCCATCACTCCCAGCCGAGAGT...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAACCTCAGCCGTACACTaGGGCCTGACATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILTSAVH*GLTCCS
Trigger: GGAACAGCATGTCAGGCCGCAGTGTACGGCTGAGGT...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSILRVKY*SDLAVG
Trigger: GCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCCTCAGGGTCAAGTACTaGTCCGACCTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFLRVKY*SDLAVG
Trigger: GCCCACGGCCAGGTCGGAGCAGTACTTGACCCTGAG...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGGTGTGGCCCGGCTCTaGAGCCCGGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLGVARL*SPATSS
Trigger: GCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGGTGTGGCCCGGCTCTaGAGCCCGGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIGVARL*SPATSS
Trigger: GCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGGTGTGGCCCGGCTCTaGAGCCCGGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYGVARL*SPATSS
Trigger: GCTGGATGTGGCCGGGCTGCAGAGCCGGGCCACACC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATGCCAGCGCTCTCTCTaGCAGTCGAGCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQCQRSL*QSSQPA
Trigger: CGCTGGCTGGCTCGACTGGCAGAGAGAGCGCTGGCA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGTCCAGGCGCCAAACCTaGAAGCGGCGAGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWSRRQT*KRRGEK
Trigger: CTTCTCTCCTCGCCGCTTGCAGGTTTGGCGCCTGGA...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR GCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTCCCAGCTCCAGCCTaGCAGCGCCACTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQFPAPA*QRHSPF
Trigger: GAAGGGGGAGTGGCGCTGGCAGGCTGGAGCTGGGAA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQINCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQIGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGGAACCTGTCATTCCTaGGTCTTTGGATCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFGTCHS*VFGSAF
Trigger: AAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTGCTCCGACCTGGCCGTaGGCCGCTCGGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAAPTWP*AARLSL
Trigger: CAGGGAAAGCCGAGCGGCCCACGGCCAGGTCGGAGC...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAGGCCTCCCTGGTCCGTaGGTGTCTCCACGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKGLPGP*VSPRLP
Trigger: CGGAAGGCGTGGAGACACCCACGGACCAGGGAGGCC...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATCTCGCTCGGCTGCTTaGCCTCCCTGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRSRSAA*PPWSVG
Trigger: ACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGCTCAGCGCTCTCCGTaGAGGAGGGAGCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFAQRSP*RRELRR
Trigger: TCTCCTGAGCTCCCTCCTCCACGGAGAGCGCTGAGC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGCGCCTGGCCTCCGCTaGGCTGCTGCGCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYAPGLR*AAAPTL
Trigger: AAGAGTGGGCGCAGCAGCCCAGCGGAGGCCAGGCGC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TGTAACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCCTGCTCGCTGGCTCTaGATGGCCTCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: CNSSNWVAPQTSKYATQIPARWL*MASKTP
Trigger: TGGAGTCTTAGAGGCCATCCAGAGCCAGCGAGCAGG...GATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCTCCTCCTCCCTCCCTaGACGCTGGTGGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFLLLPP*TLVALG
Trigger: ACCCAAAGCCACCAGCGTCCAGGGAGGGAGGAGGAG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAGGCGCAGCTTCCTCTTaGAGAAGCCCTTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIEGAASS*RSPWPR
Trigger: CCTCGGCCAAGGGCTTCTCCAAGAGGAAGCTGCGCC...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATCCAGGCTGCGGGTCTaGCGCAGCTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSISRLRV*RSFLLE
Trigger: CTCCAAGAGGAAGCTGCGCCAGACCCGCAGCCTGGA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAGCTTCGGCTACTGGCTaGCCCGGCCAGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLASATG*PGQDRR
Trigger: CCTTCTGTCCTGGCCGGGCCAGCCAGTAGCCGAAGC...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TTACACAATTATATAAAGCTGTGGAGTCCCAAGATCTGTAGTCAGCAAGCTGGAACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: LHNYIKLWSPKICSQQAGTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...TCCAGCTTGCTGACTACAGATCTTGGGACTCCACAGCTTTATATAATTGTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCTCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLISASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp AAAAACACCCTCACAGACACACCCAGCATAATGTTTGACCAAATGTCTGGGCATGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNTLTDTPSIMFDQMSGHGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...ATGCCCAGACATTTGGTCAAACATTATGCTGGGTGTGTCTGTGAGGGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LMFQFKSKGRKSPMSQLKKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...CTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLKASGLKMQEELMFQFKFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...CTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCCAGCTCACTCTCGCTaGGGTCGTGGGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIPAHSR*GRGRRS
Trigger: TGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAACCAGCTCACTCTCGCTaGGGTCGTGGGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKPAHSR*GRGRRS
Trigger: TGAGCGGCGCCCACGACCTCAGCGAGAGTGAGCTGG...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCAATGGCGGGGGCGTaGGTGCTCTACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIESMAGA*VLYLCR
Trigger: CCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGA...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACCTCCCCCTTCCTAGCTaGGGCGGGAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYLPLPS*GGRRSA
Trigger: AGCGCTGCGTCTCCCGCCTCAGCTAGGAAGGGGGAG...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAAAAGCTGCCGGATGGTaGCTTCTCCTGCGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIKAAGW*LLLRGA
Trigger: AGCACCCCGCAGGAGAAGTCACCATCCGGCAGCTTT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAGGCCATGCTCTTCTTaGGGCCGCCGCGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYRPCSS*GRRDPG
Trigger: CCCTGGGTCGCGGCGGCCTCAAGAAGAGCATGGCCT...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR TCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGTCACGGTGTCTCTCTaGGTTCCCCGCACTTCACTG +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWVTVSL*VPRTSL
Trigger: CAGTGAAGTGCGGGGAACTCAGAGAGACACCGTGAC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGGGGCCGCGTCCTCTTaGATAGCCAGCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYGAASS*IASRER
Trigger: GCGCTCCCTGCTGGCTATGCAAGAGGACGCGGCCCC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACCCGCTCGGCTTTCCCTaGCACCTGGACGTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYPLGFP*HLDVGR
Trigger: ACGCCCCACGTCCAGGTGGCAGGGAAAGCCGAGCGG...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACCTGCTCTCGCTCGGCTaGTTGGCCTCCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDLLSLG*LASLVR
Trigger: ACGGACCAGGGAGGCCAAGCAGCCGAGCGAGAGCAG...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTCTGCGTGACCTGCTaGTCTCGCTCGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFFCVTC*SRSAAW
Trigger: CCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTTTTTCTGCGTGACCTaGTGCTCTCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFFFCVT*CSRSAA
Trigger: AGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIRSSQI*QRSLCQ
Trigger: CTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIERSSQI*QRSLCQ
Trigger: CTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCT...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTTGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTACCTCCGCTGGGCTGCTaGGCCCACTCTTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLPPLGC*AHSSDC
Trigger: GCAGTCGGAAGAGTGGGCGCAGCAGCCCAGCGGAGG...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCCTGCACTCTCTCCTTaGCCCGGCGCCCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIPALSP*PGARGC
Trigger: GCAACCTCGGGCGCCGGGGCAAGGAGAGAGTGCAGG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTACTGTGGAGCAGGCTCTaGGCGGACATCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLLWSRL*ADISAG
Trigger: CCCCGCCGAGATGTCCGCGCAGAGCCTGCTCCACAG...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCACTTCTCCTGCGGGGTaGTGGGTGTGGAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFTSPAG*WVWRRT
Trigger: CGTCCTTCTCCACACCCAGCACCCCGCAGGAGAAGT...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCATCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPASFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCATCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPASFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTCATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACAGGTCAGGCGCTCGCTaGGTTCCCAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDRSGAR*VPSSSL
Trigger: CAGGCTGGAGCTGGGAACCCAGCGAGCGCCTGACCT...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGGCGCAGCTTCCTCTTaGAGAAGCCCTTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NPNPVYIKFLGCWREKESGAASS*RSPWPR
Trigger: CCTCGGCCAAGGGCTTCTCCAAGAGGAAGCTGCGCC...TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGCGGGGTGCTGGGTGTaGAGAAGGACGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFAGCWV*RRTSKE
Trigger: CTCTTTGCTCGTCCTTCTCCACACCCAGCACCCCGC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGTTGGCCAGCGCCTGCTaGCCAGGCTCCAGTTACCTT +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLELASAC*PGSSYL
Trigger: AAGGTAACTGGAGCCTGGCCAGCAGGCGCTGGCCAA...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTGTTTTTCTAGGTGCTaGCAGCAGCTGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQCFSRC*QQLSTS
Trigger: GCTGGTGGACAGCTGCTGTCAGCACCTAGAAAAACA...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTCTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTTCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGTTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGGTTGGAGTCTGTAGATaGATGCCTCCCTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRVGVCR*MPPSHG
Trigger: TCCGTGGGAGGGAGGCATTCATCTACAGACTCCAAC...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATGGGGTCTTTGGCACTaGGGTGTGGCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVWGLWH*GVARLC
Trigger: GCAGAGCCGGGCCACACCTCAGTGCCAAAGACCCCA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGGGCAGACGCGGAGATaGCCCCGTACGCTCGCTCTA +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLGQTRR*PRTLAL
Trigger: TAGAGCGAGCGTACGGGGTCATCTCCGCGTCTGCCC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR TCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTAAGTTAGGGGATCATTaGTCAGTGGTACTATCTGAA +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLKLGDH*SVVLSE
Trigger: TTCAGATAGTACCACTGATCAATGATCCCCTAACTT...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGTCCTCCGAGCCCCCTaGGTGTCGCTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLVLRAP*VSLSSS
Trigger: AGAGCTGGACAGCGACACGCAGGGGGCTCGGAGGAC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAGTAGAGCTGGAGGAATaGCGGGGCTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVVELEE*RGWSWG
Trigger: GCCCCAGCTCCAGCCCCGGCATTCCTCCAGCTCTAC...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR GCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGCCTCCAAAGACTGCGTaGCCACGGTGGGATGGAATT +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRPPKTA*PRWDGI
Trigger: AATTCCATCCCACCGTGGGCACGCAGTCTTTGGAGG...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGCCCACTCTTCCGACTaGAGAGGCTCAAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWAHSSD*RGSRVV
Trigger: AACAACCCTTGAGCCTCTGCAGTCGGAAGAGTGGGC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGACTGGAACTTCCTCTaGTGGAGCCACCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWDWNFL*WSHLLG
Trigger: TCCTAGGAGGTGGCTCCAGCAGAGGAAGTTCCAGTC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATCCGTGCGTGCCGAGTaGTGTGCAAAGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVSVRAE*CAKRPW
Trigger: CCAGGGGCGCTTTGCACAGCACTCGGCACGCACGGA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGCCCTGCTCCGTGCGTaGCGAGTGCTGTGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIALLRA*RVLCKA
Trigger: CGCTTTGCACAGCACTCGGCACGCACGGAGCAGGGC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR GCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCACACCATGCCACATaGAACAAGAGGAGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVPHHAT*NKRRVA
Trigger: AGCGACCCTCCTCTTGTTGCATGTGGCATGGTGTGG...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCACTGGAGATCCTGCAATAAAGTTCCTAGGATaGTGGAGGGAAAAAGAATCA +
Preference number: 4 (lower is better)
Translates to: QQEEMGLWEAQSLTGDPAIKFLG*WREKES
Trigger: TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTAT...TGCAGGATCTCCAGTGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTACACAATTATATAAAGCTGTGGAGTCCCAAGATCTGTAGTCAGCAAGCTGGAGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: LHNYIKLWSPKICSQQAGGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...TCCAGCTTGCTGACTACAGATCTTGGGACTCCACAGCTTTATATAATTGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGCATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACCTCTCGCTGAGGTCGTaGGCGCCGCTCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYLSLRS*APLRVK
Trigger: CTTGACCCTGAGCGGCGCCCACGACCTCAGCGAGAG...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVAAWPP*SVGVST
Trigger: CGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGC...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGCTGCTTGGCCTCCCTaGTCCGTGGGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLAAWPP*SVGVST
Trigger: CGTGGAGACACCCACGGACCAGGGAGGCCAAGCAGC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACTCTCGCTCGGCTGCTTaGCCTCCCTGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYSRSAA*PPWSVG
Trigger: ACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGA...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTTCTCGCTCGGCTGCTTaGCCTCCCTGGTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYISRSAA*PPWSVG
Trigger: ACCCACGGACCAGGGAGGCCAAGCAGCCGAGCGAGA...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTCACTTTTGAGAAGTGTGAAAGAAGAACACTAAGTGTGCCAGTGGCCACCACCAGGCTGGCTACGCAATaGAACCTTATTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: VTFEKCERRTLSVPVATTRLATQ*NLILNG
Trigger: GCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCT...GGTGGTGGCCACTGGCACACTTAGTGTTCTTCTTTCACACTTCTCAAAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGCCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCTCTCATTTCCTCAGCCTTTaGCACAATGTAAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: SQWRGRECSTSVGELDFSHFLSL*HNVSTK
Trigger: CTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATG...AGAGAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAACTGCGTGCCCACGGTaGGATGGAATTCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLTACPR*DGIPGG
Trigger: GCCGCCGGGAATTCCATCCCACCGTGGGCACGCAGT...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATGTCTTGCTGCAGTGTaGGGACACCGAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLCLAAV*GHRACC
Trigger: GCAGCACGCTCGGTGTCCCCACACTGCAGCAAGACA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAACCTGCTCGCTGGCTCTaGATGGCCTCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIEPARWL*MASKTP
Trigger: TGGAGTCTTAGAGGCCATCCAGAGCCAGCGAGCAGG...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTTCTTGGAGAAGCCCTTaGCCGAGGCCGCGCTACTTG +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFSWRSP*PRPRYL
Trigger: CAAGTAGCGCGGCCTCGGCCAAGGGCTTCTCCAAGA...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACTGTCGGGTGGGGACTaGAACTTCCTCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLLSGGD*NFLCWS
Trigger: GCTCCAGCAGAGGAAGTTCCAGTCCCCACCCGACAG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTACCTTTCCCAAGCCTTaGTCCAGGAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSTFPKP*SRRTFP
Trigger: AGGGAAAGTTCTCCTGGACCAAGGCTTGGGAAAGGT...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CATGCGTTTATTTCCCAGATATCTGAGACTTGGAGTGTGGCCTGCAGGGACCCTAAGTTCCTAGGATGCTaGAGGGAAAAAGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: HAFISQISETWSVACRDPKFLGC*REKESA
Trigger: AGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTT...AGGGTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTGGGAAATAAACGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGCTGGCAGGGTACTGTaGGCAGGCCTGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLAGRVL*AGLHCS
Trigger: GCTGCAGTGCAGGCCTGCCCACAGTACCCTGCCAGC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTCATGCAGAAGGAGTTCCTGTCATTCCTaGGTCTTTGGATCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSKGRKSPMSQLKQSCRRSSCHS*VFGSAF
Trigger: AAAAGCGGATCCAAAGACCCAGGAATGACAGGAACT...CCTTCTGCATGACTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp ATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGACCGAGGAGAGCCGATaGCACACTTCTGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: MFQFKSKGRKSPMSQLKQTEESR*HTSGLK
Trigger: TTTCAGACCAGAAGTGTGCCATCGGCTCTCCTCGGT...CTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAACCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACCGTACACTGCGGCCTaGCATGCTGTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLPYTAA*HAVPGE
Trigger: TTCACCTGGAACAGCATGTCAGGCCGCAGTGTACGG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTTTAGAAATGGGCCCTCTCCAGCTCTaGGAGACTCTGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LEGCLHTYSRFSLFSLEMGPLQL*ETLDGD
Trigger: GTCCCCATCCAGAGTCTCTCAGAGCTGGAGAGGGCC...CATTTCTAAAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCCCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGGAGAAAGCAGAACGTaGAGAGTTTTCCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWGESRT*RVFQAP
Trigger: TGGCGCCTGGAAAACTCTTCACGTTCTGCTTTCTCC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337414.9
CDS-3UTR TCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTACATGCTGTTCCAGGTaGAATCACCCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTTCCSR*NHPRIS
Trigger: GGAAATCCGAGGGTGATTTCACCTGGAACAGCATGT...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACCTCAGCCGTACACTaGGGCCTGACATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQTSAVH*GLTCCS
Trigger: GGAACAGCATGTCAGGCCGCAGTGTACGGCTGAGGT...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGGGAGGGTGTCGCAGTTaGAGGGAGGTAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWGGCRS*REVEGI
Trigger: TATACCTTCTACCTCCCTGCAACTGCGACACCCTCC...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LMFQFKSKGRKSPMSQLKESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...CTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp GCTCAAGCAGTCATGCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCG +
Preference number: 4 (lower is better)
Translates to: AQAVMQKAFPLTHGRVSLLFNVE*QVPQIS
Trigger: CGATATCTGGGGAACTTGGCATTCAACATTAAAAAG...AAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTTTTCTGCGTGACCTaGTGCTCTCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFFFCVT*CSRSAA
Trigger: AGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATTTTTCTGCGTGACCTaGTGCTCTCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIFFCVT*CSRSAA
Trigger: AGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAAAAA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACAGGAGCTCCCAGATCTaGCAGCGCTCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNRSSQI*QRSLCQ
Trigger: CTGGCAGAGAGAGCGCTGGCAGATCTGGGAGCTCCT...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGCCCACTCTTCCGACTaGAGAGGCTCAAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIAHSSD*RGSRVV
Trigger: AACAACCCTTGAGCCTCTGCAGTCGGAAGAGTGGGC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGCGGATGAACAGAGGATaGTGGAAGCGCTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMRMNRG*WKRFGY
Trigger: GTAGCCGAAGCGCTTCCAGCATCCTCTGTTCATCCG...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAAGAGCCCCACACCATaGCACATGCAACAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRKSPTP*HMQQEE
Trigger: CTCCTCTTGTTGCATGTGGCATGGTGTGGGGCTCTT...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGAGAAATGGCCCAGCTaGCATAGCTGTGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFEKWPS*HSCDSH
Trigger: GTGGGAGTCACAGCTATGCCAGCTGGGCCATTTCTC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCCTGAGAGACTCTGGATaGGGACTGACCTCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFLRDSG*GLTSAV
Trigger: TACGGCTGAGGTCAGTCCCCATCCAGAGTCTCTCAG...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: NPNPVYIKFLGCWREKESGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CAAAAATGTCTCCAGAGGAACCTGTCATTCCTGGGTCTTTGGATCCGCTTTTTAATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: QKCLQRNLSFLGLWIRFLISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...TAAAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCCTCTGGAGACATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: GLKASGLKMQEELMFQFKFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...CTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCCACCGAGGCCAATTTaGGGACAGGTTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFPPRPI*GQVPLR
Trigger: TCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAACCTTATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGAATTTGATGTAACGTaGGACGGACAACTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: EPYSQWRGRECSTSVGELEFDVT*DGQLLN
Trigger: ATTAAGAAGTTGTCCGTCCCACGTTACATCAAATTC...CAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCTCGCTGGCTCTGGATaGCCTCTAAGACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRILAGSG*PLRLQQ
Trigger: TTGCTGGAGTCTTAGAGGCCATCCAGAGCCAGCGAG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTACTCCCTGGACGCTGGTaGCTTTGGGTCGGGAACCGA +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVLPGRW*LWVGNR
Trigger: TCGGTTCCCGACCCAAAGCCACCAGCGTCCAGGGAG...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGGCGCAGCTTCCTCTTaGAGAAGCCCTTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLGAASS*RSPWPR
Trigger: CCTCGGCCAAGGGCTTCTCCAAGAGGAAGCTGCGCC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGCCTTGGGCTCAGCCTaGGGTCACGGTGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLALGSA*GHGVSL
Trigger: CAGAGAGACACCGTGACCCCAGGCTGAGCCCAAGGC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380736.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTACCTTTCCCAAGCCTTaGTCCAGGAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTTFPKP*SRRTFP
Trigger: AGGGAAAGTTCTCCTGGACCAAGGCTTGGGAAAGGT...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCAGATATCTGAGACTTaGAGTGTGGCCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVQISET*SVACRD
Trigger: GTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTG...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGCAGATATCTGAGACTTaGAGTGTGGCCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VYIKFLGCWREKESAGNRQISET*SVACRD
Trigger: GTCCCTGCAGGCCACACTCCAAGTCTCAGATATCTG...CCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp ACAGCAGTAATTGGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTTGTAACAGCAGTAATTaGGTGGCACCTCAGACTAGC +
Preference number: 4 (lower is better)
Translates to: TAVIGWHLRLANMQPKSSCNSSN*VAPQTS
Trigger: GCTAGTCTGAGGTGCCACCCAATTACTGCTGTTACA...ACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCCAATTACTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CAACGACTGGGCTCGCCATACCTTCCTCTTCCTAGAGTAGGCGTTCAGCAGGTAAACACTATTTGGTTCTaGAAGGTTGTCTTCATACAT +
Preference number: 4 (lower is better)
Translates to: QRLGSPYLPLPRVGVQQVNTIWF*KVVFIH
Trigger: ATGTATGAAGACAACCTTCCAGAACCAAATAGTGTT...TACCTGCTGAACGCCTACTCTAGGAAGAGGAAGGTATGGCGAGCCCAGTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTAGGATGCTGGAGGGAAAAAGAATCAGCTGGGAATAGGAGTGGCTCCTCTGGGGATACTAACACTATTTaGTTCTGGAAGGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGCWREKESAGNRSGSSGDTNTI*FWKVVF
Trigger: GAAGACAACCTTCCAGAACCAAATAGTGTTAGTATC...CCCAGAGGAGCCACTCCTATTCCCAGCTGATTCTTTTTCCCTCCAGCATCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAAACTCTGGATGGGGACTaGCCTCAGCCGTACACTGCG +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKTLDGD*PQPYTA
Trigger: CGCAGTGTACGGCTGAGGTCAGTCCCCATCCAGAGT...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGTTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAATTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATTCTCAATGGCGGGGGCGTGAGTGCTCTACCTCTGTAGGTGAACTGGATTTCCAAATGCCTGTGGGATaGATTCTTTGTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YSQWRGRECSTSVGELDFQMPVG*ILCLCF
Trigger: AAAACAAAGACAAAGAATTCATCCCACAGGCATTTG...GAAATCCAGTTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGCCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTTCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAACGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTATCAATGGCGGGGGCGTaGGTGCTCTACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLSMAGA*VLYLCR
Trigger: CCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGA...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATCAATGGCGGGGGCGTaGGTGCTCTACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVSMAGA*VLYLCR
Trigger: CCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTTCAATGGCGGGGGCGTaGGTGCTCTACCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYISMAGA*VLYLCR
Trigger: CCTACAGAGGTAGAGCACTCACGCCCCCGCCATTGA...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TTACACAATTATATAAAGCTGTGGAGTCCCAAGATCTGTAGTCAGCAAGCTGGAGGCAGGCTGTGTCCCTaGGTAAGTGCACAAATGAGT +
Preference number: 4 (lower is better)
Translates to: LHNYIKLWSPKICSQQAGGRLCP*VSAQMS
Trigger: ACTCATTTGTGCACTTACTCAGGGACACAGCCTGCC...TCCAGCTTGCTGACTACAGATCTTGGGACTCCACAGCTTTATATAATTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp AAAAACACCCTCACAGACACACCCAGCATAATGTTTGACCAAATGTCTGGGCATAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KNTLTDTPSIMFDQMSGHSHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...ATGCCCAGACATTTGGTCAAACATTATGCTGGGTGTGTCTGTGAGGGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCCTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIERYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp AGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGTTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SGLKMQEELMFQFKSKGRLSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...CCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTATTCTGCGTGACCTGCTaGTCTCGCTCGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLFCVTC*SRSAAW
Trigger: CCAAGCAGCCGAGCGAGAGCAGCAGGTCACGCAGAA...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCAGTCAAAGTGAAAGCTaGCGGATGGTGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFSQSES*RMVTSP
Trigger: AGGAGAAGTCACCATCCGGCAGCTTTCACTTTGACT...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGACTGGAACTTCCTCTaGTGGAGCCACCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: NPNPVYIKFLGCWREKESDWNFL*WSHLLG
Trigger: TCCTAGGAGGTGGCTCCAGCAGAGGAAGTTCCAGTC...TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGCTCACTGGAGATCCTaGAGGTTGAAAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLEAHWRS*RLKVAE
Trigger: CTCTGCCACTTTCAACCTGCAGGATCTCCAGTGAGC...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAATCACCCTTTTGTTaGCAGAGACCTCCGCTACTG +
Preference number: 4 (lower is better)
Translates to: SGLKMQEELMFQFKSKGRKSPFC*QRPPLL
Trigger: CAGTAGCGGAGGTCTCTGGCAACAAAAGGGTGATTT...CCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAAGCTCTGAGAGACTCTaGATGGGGACTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQSSERL*MGTDLS
Trigger: GCTGAGGTCAGTCCCCATCCAGAGTCTCTCAGAGCT...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GCAGAAGGCCTTCCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTTCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: AEGLPSYSWKGQPFCHSGSFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...ACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGGAAGGCCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACGGTGAGAAGGGGGTCTaGCATGTCCCTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDGEKGV*HVPQEL
Trigger: GAGTTCCTGAGGGACATGCCAGACCCCCTTCTCACC...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAAACTGTAGCAGGCGGTaGAGGGTGTCGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKNCSRR*RVSQLQ
Trigger: CTGCAACTGCGACACCCTCCACCGCCTGCTACAGTT...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACCATGCCTGGCCACGATaGAGAGGAACTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNHAWPR*RGTVAG
Trigger: GCCTGCTACAGTTCCTCTCCATCGTGGCCAGGCATG...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATGTCATCGGCATGCCTaGCCACGATGGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLCHRHA*PRWRGT
Trigger: AGTTCCTCTCCATCGTGGCCAGGCATGCCGATGACA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGGGAGATGTCTCCGCTaGAGGCCTTGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNGRCLR*RPCWSL
Trigger: CAGACTCCAACAAGGCCTCCAGCGGAGACATCTCCC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLKASGLKMQEELMFQFKQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...CTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTTCAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGACCACCGAGGCCAATTTaGGGACAGGTTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRPPRPI*GQVPLR
Trigger: TCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGG...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGAACCTTATTCTCAATaGCGGGGGCGTGAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFEPYSQ*RGRECS
Trigger: AGAGCACTCACGCCCCCGCCATTGAGAATAAGGTTC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ACAGATCTTTCCCAAGCCTTGGTCCAGGAGAACTTTCCCTTGACTTTGACGACGCATTTCCTCAGCCTTTaGCACAATGTAAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: TDLSQALVQENFPLTLTTHFLSL*HNVSTK
Trigger: CTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATG...CGTCGTCAAAGTCAAGGGAAAGTTCTCCTGGACCAAGGCTTGGGAAAGATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACCCTGCTCGCTGGCTCTaGATGGCCTCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDPARWL*MASKTP
Trigger: TGGAGTCTTAGAGGCCATCCAGAGCCAGCGAGCAGG...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGGACGCTGGTGGCTTTaGGTCGGGAACCGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYGRWWL*VGNRKG
Trigger: TCCCTTTCGGTTCCCGACCCAAAGCCACCAGCGTCC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTTCTTGGAGAAGCCCTTaGCCGAGGCCGCGCTACTTG +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKASWRSP*PRPRYL
Trigger: CAAGTAGCGCGGCCTCGGCCAAGGGCTTCTCCAAGA...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGCGGGGTGCTGGGTGTaGAGAAGGACGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIAGCWV*RRTSKE
Trigger: CTCTTTGCTCGTCCTTCTCCACACCCAGCACCCCGC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGATGAACAGAGGATGCTaGAAGCGCTTCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLEMNRGC*KRFGYW
Trigger: CCAGTAGCCGAAGCGCTTCCAGCATCCTCTGTTCAT...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCTGTCGGGTGGGGACTaGAACTTCCTCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYILSGGD*NFLCWS
Trigger: GCTCCAGCAGAGGAAGTTCCAGTCCCCACCCGACAG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
3UTR CAA 72 bp CTGTCATTCCTGGGTCTTTGGATCCGCTTTTTAATGTaGAATGCCAAGTTCCCCAGATATCGAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSFLGLWIRFLM*NAKFPRYRKAP
Trigger: AGGAGCCTTTCGATATCTGGGGAACTTGGCATTCAACATTAAAAAGCGGATCCAAAGACCCAGGAATGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAAGACCTCCGCTACTGTaGATCTTGGGACCAAAAATA +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILRPPLL*ILGPKI
Trigger: TATTTTTGGTCCCAAGATTCACAGTAGCGGAGGTCT...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR TCA 90 bp CTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGAGACCTCCGCTACTGTaGATCTTGGGACCAAAAATA +
Preference number: 4 (lower is better)
Translates to: LMFQFKSKGRKSPMSQLKRPPLL*ILGPKI
Trigger: TATTTTTGGTCCCAAGATTCACAGTAGCGGAGGTCT...CTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCATCATATTGAATGTCTaGGAAATGGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFIILNV*EMAQLA
Trigger: TGCCAGCTGGGCCATTTCTCAGACATTCAATATGAT...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAACCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAACTTGCCCATCTTTGCTaGTGTTGTCATCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQLAHLC*CCHRHA
Trigger: GGCATGCCGATGACAACATCAGCAAAGATGGGCAAG...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: SGLKMQEELMFQFKSKGRDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...CCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTGGAGATCCTGCAGGTTaGAAGTGGCAGAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFGDPAG*KWQSRF
Trigger: AAACCTGCTCTGCCACTTTCAACCTGCAGGATCTCC...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIESDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGTCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLESDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATGGCGGGGGCGTGAGTaGTCTACCTCTGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVWRGRE*STSVGE
Trigger: TTCACCTACAGAGGTAGAGCACTCACGCCCCCGCCA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACCTCCAAAGACTGCGTaGCCACGGTGGGATGGAATT +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKPPKTA*PRWDGI
Trigger: AATTCCATCCCACCGTGGGCACGCAGTCTTTGGAGG...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTAAGAGCCCCACACCATaGCACATGCAACAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFKSPTP*HMQQEE
Trigger: CTCCTCTTGTTGCATGTGGCATGGTGTGGGGCTCTT...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIKETSD*SMSGLP
Trigger: AGGAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR GCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAACAGCTCAAGCAGTCATaGAGAAGGCCTTCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKQLKQS*RRPSLL
Trigger: TAAGAGGGAAGGCCTTCTGCATGACTGCTTGAGCTG...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp GGTCTGAAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGAATATCCCCACTGTCTaGAGGCCATGTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GLKASGLKMQEELMFQFKNIPTV*RPCFSR
Trigger: CCTAGAAAAACATGGCCTCCAGACAGTGGGGATATT...CTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTTCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIEACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGCTTGTGCAGCAGGTTaGGTCCAAATATGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLEACAAG*VQIWWL
Trigger: TAGCCACCATATTTGGACCCAACCTGCTGCACAAGC...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTGGAACCTGTCATTCCTaGGTCTTTGGATCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFGTCHS*VFGSAF
Trigger: AAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCC...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTCGCTGGCTCTGGATaGCCTCTAAGACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKLAGSG*PLRLQQ
Trigger: TTGCTGGAGTCTTAGAGGCCATCCAGAGCCAGCGAG...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAACTAGGAAAATGGGTCTaGGGACCTCCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKLGKWV*GPPAAA
Trigger: AGCGGCTGCAGGAGGTCCCCAGACCCATTTTCCTAG...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTAGCTCAATCGCTCACTaGAGATCCTGCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVSSIAH*RSCRLK
Trigger: TTTCAACCTGCAGGATCTCCAGTGAGCGATTGAGCT...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCGGGATCATTGATCAGTaGTACTATCTGAACAATTGT +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLIGIIDQ*YYLNNC
Trigger: ACAATTGTTCAGATAGTACCACTGATCAATGATCCC...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR CAA 72 bp GCAGAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTaGTCATTGGATACTAACACTATTTGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AEQVCDSQYSAL*SLDTNTIWFWK
Trigger: CTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACTTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACCCTGTCATTCGCAATaGCTTGGGATAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLPCHSQ*LGIRAF
Trigger: GAATGCCCTTATCCCAAGTCATTGCGAATGACAGGG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGTCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTTTAGAAATGGGTGATAGAATCCACTaGCATGGCACCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEGCLHTYSRFSLFSLEMGDRIH*HGTPPP
Trigger: AGGAGGAGGGGTGCCATGTCAGTGGATTCTATCACC...CATTTCTAAAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAAGGCTGCCACATCATaGACACTGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLKAATS*TLCSSS
Trigger: GGAGGAGGAGCACAGTGTTCATGATGTGGCAGCCTT...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATTTGCACAACAGCGATaGTGGCCGTGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVFAQQR*WPCSPQ
Trigger: CTGAGGAGAGCACGGCCATCATCGCTGTTGTGCAAA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CCCTCTTACTCATGGAAGGGTCAGCCTTTTTGTCATTCAGGTCTGCAGCTGATCTTGGGACCAAAAATATaGAATCTTTTCATCGGATCA +
Preference number: 4 (lower is better)
Translates to: PSYSWKGQPFCHSGLQLILGPKI*NLFIGS
Trigger: TGATCCGATGAAAAGATTGCATATTTTTGGTCCCAA...GATCAGCTGCAGACCTGAATGACAAAAAGGCTGACCCTTCCATGAGTAAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLSDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTTCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSSDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAACTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIELFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTATGTTGTCATCGGCATaGCTGGCCACGATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAMLSSA*LATMER
Trigger: CCTCTCCATCGTGGCCAGGCATGCCGATGACAACAT...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFLSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRILSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIELSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
CDS-3UTR GCA 90 bp AACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGGGAAAAAGAATCAGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NPNPVYIKFLGCWREKESESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCCGCTCTTAGGGAGCTaGTTTCAAAAATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFPLLGS*FQKCLQ
Trigger: CTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCCCGCTCTTAGGGAGCTaGTTTCAAAAATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFPLLGS*FQKCLQ
Trigger: CTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGG...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTCCTAGGATGCTGGAGAGTCAAAGTGAAAGCTaGCGGATGGTGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LANMQPKSSIHKVPRMLESQSES*RMVTSP
Trigger: AGGAGAAGTCACCATCCGGCAGCTTTCACTTTGACT...CTCCAGCATCCTAGGAACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380718.1
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACCGGATGAACAGAGGATaGTGGAAGCGCTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYRMNRG*WKRFGY
Trigger: GTAGCCGAAGCGCTTCCAGCATCCTCTGTTCATCCG...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACGACTGGAACTTCCTCTaGTGGAGCCACCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYDWNFL*WSHLLG
Trigger: TCCTAGGAGGTGGCTCCAGCAGAGGAAGTTCCAGTC...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAGTCATGCAGAATCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LSPKAGKVQCPSSSSHAESFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...TTCTGCATGACTGCTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACTTCGTTCTGGAGATCTaGGGGAACCATGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNFVLEI*GNHEQG
Trigger: GCCCTGTTCATGGTTCCCCCAGATCTCCAGAACGAA...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGCGCTCAGACAGCACTaGGGAGTTGTTGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNALRQH*GVVVIR
Trigger: CCTTATGACAACAACTCCCCAGTGCTGTCTGAGCGC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSIQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAATTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAACCACCGAGGCCAATTTaGGGACAGGTTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKPPRPI*GQVPLR
Trigger: TCTCAAGGGAACCTGTCCCCAAATTGGCCTCGGTGG...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTTGTCTGGGCATCCTGTaGCATAGTCAGGTTGACACA +
Preference number: 4 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSCLGIL*HSQVDT
Trigger: TGTGTCAACCTGACTATGCCACAGGATGCCCAGACA...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
3UTR CAA 72 bp CAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATaGGATACTAACACTATTTGGTTCTGGAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: QVCDSQYSALLS*DTNTIWFWKVV
Trigger: GACAACCTTCCAGAACCAAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTAATGGCAGATCATATTaGATGTCTGAGAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFNGRSY*MSEKWP
Trigger: GGGCCATTTCTCAGACATTCAATATGATCTGCCATT...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTATTGGGAATGGTGATCTaGCAGCTCAGGTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLLGMVI*QLRSQS
Trigger: GGACTGTGACCTGAGCTGTCAGATCACCATTCCCAA...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAGAGGTAGAAGGTATATaGGGAGCTGCAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVEVEGI*GAARCP
Trigger: TGGGCACCTTGCAGCTCCTCATATACCTTCTACCTC...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIESFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCGGTCTCTAACAGGCTaGTCAGCACTTCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIRSLTG*SALRSG
Trigger: TCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACCG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRILYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTTTAGAAATGGGAGATCCTGCAGGTTaGAAGTGGCAGAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEGCLHTYSRFSLFSLEMGDPAG*KWQSRF
Trigger: AAACCTGCTCTGCCACTTTCAACCTGCAGGATCTCC...CATTTCTAAAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTTTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLSHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFSHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCTCTTTCAGCAAGGCTaGCACATCATGAACACTGTG +
Preference number: 4 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSLFQQG*HIMNTV
Trigger: CACAGTGTTCATGATGTGGCAGCCTTGCTGAAAGAG...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAAAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTAGGTATATGAGGAGCTaGAAGGTGCCCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIRYMRS*KVPSCS
Trigger: GGAACAGCTGGGCACCTTGCAGCTCCTCATATACCT...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFDDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTACGCTACTGTGAATCTTaGGACCAAAAATATGCAATC +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILRYCES*DQKYAI
Trigger: GATTGCATATTTTTGGTCCCAAGATTCACAGTAGCG...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILSFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCAATATCCCCACTGTCTaGAGGCCATGTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFNIPTV*RPCFSR
Trigger: CCTAGAAAAACATGGCCTCCAGACAGTGGGGATATT...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILLDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGCCAGTTATAAAGCTATaGCAAAAGCACAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWPVIKL*QKHRNP
Trigger: CGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGG...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATTCTGAGTTTTCACAGCAGGAGGAAATGGGACTCTGGGAAGCTCAATCGCTCAAACACTATTTGGTTCTaGAAGGTTGTCTTCATACAT +
Preference number: 4 (lower is better)
Translates to: ILSFHSRRKWDSGKLNRSNTIWF*KVVFIH
Trigger: ATGTATGAAGACAACCTTCCAGAACCAAATAGTGTT...TGAGCGATTGAGCTTCCCAGAGTCCCATTTCCTCCTGCTGTGAAAACTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTCCAATGTCCCAGCTCAAGCAAATGCCTGTGGGATaGATTCTTTGTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LMFQFKSKGRKSPMSQLKQMPVG*ILCLCF
Trigger: AAAACAAAGACAAAGAATTCATCCCACAGGCATTTG...CTTGAGCTGGGACATTGGACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACTCTGCAAGTCCTGCTTaGGTTTATAGGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNSASPA*VYRPCH
Trigger: ATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGA...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTGCCCGGGCTGAACTCTaGACTGAGAATTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAARAEL*TENSLS
Trigger: AGACAAAGAATTCTCAGTTCAGAGTTCAGCCCGGGC...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAATCGAAAGGCTCCTCTaGCAGATCTTTCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVIERLL*QIFPKP
Trigger: AGGCTTGGGAAAGATCTGTCAGAGGAGCCTTTCGAT...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGACTCTACCTCTGTAGGTaGACTGGATTTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRLYLCR*TGFLLC
Trigger: ACACAAGAGAAATCCAGTTCACCTACAGAGGTAGAG...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TCCCCAGTTATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTATTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPVIKLWQKHRNPLVHILFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...TAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCACGATACCTTTTGTTaGCAGAGACCTCCGCTACTG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIHDTFC*QRPPLL
Trigger: CAGTAGCGGAGGTCTCTGGCAACAAAAGGTATCGTG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR GCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACTTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACTCAGATGCATCTTTCTaGTCGTCCCTCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYSDASF*SSLCKS
Trigger: GGACTTGCAGAGGGACGAGCAGAAAGATGCATCTGA...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAAGAGTCTGTAGATGAATaGCTCCCTCCCACGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKESVDE*LPPTEK
Trigger: CTTTTCCGTGGGAGGGAGGCATTCATCTACAGACTC...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TATAGAGCCAAGAGGGACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCG +
Preference number: 4 (lower is better)
Translates to: YRAKRDVFRLDIAIWFGFLFNVE*QVPQIS
Trigger: CGATATCTGGGGAACTTGGCATTCAACATTAAAAAG...GAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACCCGCTCTTAGGGAGCTaGTTTCAAAAATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNPLLGS*FQKCLQ
Trigger: CTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGG...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GTTCTGTTTGTTTTTCCTAAGGCTGGCTACGCAATGGAACCTTATTCTCAATGGTCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VLFVFPKAGYAMEPYSQWSFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...CCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCTTAGGAAAAACAAACAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GGGTGGCACCTCAGACTAGCAAATATGCAACCCAAATCCAGTATACATAAAGTTTCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: GWHLRLANMQPKSSIHKVSFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...AACTTTATGTATACTGGATTTGGGTTGCATATTTGCTAGTCTGAGGTGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTAAATATCCCCACTGTCTaGAGGCCATGTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLNIPTV*RPCFSR
Trigger: CCTAGAAAAACATGGCCTCCAGACAGTGGGGATATT...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAATCAGCACTTCGTTCTaGAGATCTGGGGGAACCATG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLISTSF*RSGGTM
Trigger: CATGGTTCCCCCAGATCTCCAGAACGAAGTGCTGAT...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACCAGCATAAACTGCCCTaGCACTCTGTAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNQHKLP*HSVKLL
Trigger: GAGAAGCTTTACAGAGTGCCAGGGCAGTTTATGCTG...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACTTTGACGACGACAAGTaGCCCACCAGCATAAACTGC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYFDDDK*PTSINC
Trigger: GCAGTTTATGCTGGTGGGCCACTTGTCGTCGTCAAA...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AGCAAGAGTTGTATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATTGGACAGGCTGGCTACGCAATaGAACCTTATTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SKSCILYYRAKRDVFRLDRLATQ*NLILNG
Trigger: GCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCT...GTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGATACAACTCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAAGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIEGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCCAGTTATAAAGCTATaGCAAAAGCACAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFPVIKL*QKHRNP
Trigger: CGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCCAGTTATAAAGCTATaGCAAAAGCACAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRIPVIKL*QKHRNP
Trigger: CGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GATGTAACGTGGGACGGACAACTTCTTAATTTCTTTGTGAGGCACTGCCTTTTTCATTTCCTCAGCCTTTaGCACAATGTAAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: DVTWDGQLLNFFVRHCLFHFLSL*HNVSTK
Trigger: CTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATG...AAAAAGGCAGTGCCTCACAAAGAAATTAAGAAGTTGTCCGTCCCACGTTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCCGTATCGCCATCTGCTaGTCAAAAATAGTTATGCAC +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFRIAIC*SKIVMH
Trigger: GTGCATAACTATTTTTGACCAGCAGATGGCGATACG...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAGCAGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTGATACTAACACTATTTaGTTCTGGAAGGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EQVCDSQYSALLSLDTNTDTNTI*FWKVVF
Trigger: GAAGACAACCTTCCAGAACCAAATAGTGTTAGTATC...AGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTTTCATCGGATCATTaGGAAGTTCCTGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFFSSDH*EVPVLS
Trigger: TGAAAGGACAGGAACTTCTCAATGATCCGATGAAAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAATTTTCATCGGATCATTaGGAAGTTCCTGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKFSSDH*EVPVLS
Trigger: TGAAAGGACAGGAACTTCTCAATGATCCGATGAAAA...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp TATAAAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCAATTGCATAAAATACTaGAGCGTATCGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: YKAMAKAQKPACAHSRTFNCIKY*SVSPSA
Trigger: AGCAGATGGCGATACGCTTCAGTATTTTATGCAATT...GAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp TTACACAATTATATAAAGCTGTGGAGTCCCAAGATCTGTAGTCAGCAAGCTGGATATAGTGCTGCTCCATaGTCATGGGTAAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LHNYIKLWSPKICSQQAGYSAAP*SWVNLE
Trigger: TTCAAGATTTACCCATGATCATGGAGCAGCACTATA...TCCAGCTTGCTGACTACAGATCTTGGGACTCCACAGCTTTATATAATTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATTCTGCTCGTCCCTCTaGAAGTCCTGCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVFCSSL*KSCLSL
Trigger: TAAACTCAAGCAGGACTTGCAGAGGGACGAGCAGAA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKASHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTAGCCACAAAGTCAGATaGATCTTTCTGCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYISHKVR*IFLLVP
Trigger: AGGGACGAGCAGAAAGATGCATCTGACTTTGTGGCT...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTGATGACTTCTGCTTGTaGAGCAGGTTGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKADDFCL*SRLGPN
Trigger: ATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATC...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTTTGTCTGATGACTTCTaGTTGTGCAGCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKALSDDF*LCSRLG
Trigger: ACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAA...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
CDS-3UTR GCA 90 bp CTGGAAGGTTGTCTTCATACATATAGTAGGTTCAGCTTGTTTTCTTTAGAAATGAAGGAAACTTCCGACTaGAGCATGTCAGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LEGCLHTYSRFSLFSLEMKETSD*SMSGLD
Trigger: ATCAAGCCCTGACATGCTGCAGTCGGAAGTTTCCTT...CATTTCTAAAGAAAACAAGCTGAACCTACTATATGTATGAAGACAACCTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR GCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTCCGCTCTTAGGGAGCTaGTTTCAAAAATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAPLLGS*FQKCLQ
Trigger: CTGGAGACATTTTTGAAAGCAGCTCCCTAAGAGCGG...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAAGTCAAAGTGAAAGCTaGCGGATGGTGACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVSQSES*RMVTSP
Trigger: AGGAGAAGTCACCATCCGGCAGCTTTCACTTTGACT...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337414.9
ENST00000495242.5
CDS-3UTR CCA 90 bp TTACACAATTATATAAAGCTGTGGAGTCCCAAGATCTGTAGTCAGCAAGCTGGACGCTACTGTGAATCTTaGGACCAAAAATATGCAATC +
Preference number: 4 (lower is better)
Translates to: LHNYIKLWSPKICSQQAGRYCES*DQKYAI
Trigger: GATTGCATATTTTTGGTCCCAAGATTCACAGTAGCG...TCCAGCTTGCTGACTACAGATCTTGGGACTCCACAGCTTTATATAATTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSISFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRISFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAGGAACCTGTCATTCCTaGGTCTTTGGATCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVGTCHS*VFGSAF
Trigger: AAAAGCGGATCCAAAGACCCAGGAATGACAGGTTCC...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTAAGGCTGGCTACGCAATaGAACCTTATTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVRLATQ*NLILNG
Trigger: GCCATTGAGAATAAGGTTCCATTGCGTAGCCAGCCT...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATATTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSILDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGAGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTATCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCTCATTGTTTAGTATCTAGTAGTCGAGACTaGTTGTCATCAAGATCGGTG +
Preference number: 4 (lower is better)
Translates to: RNPLVHILEHSIESHCLVSSSRD*LSSRSV
Trigger: CACCGATCTTGATGACAATCAGTCTCGACTACTAGA...TACTAAACAATGAGATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAATCATTTTATTCCCAGTaGCCTCTTGCCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKSFYSQ*PLAHLC
Trigger: GCAAAGATGGGCAAGAGGTCACTGGGAATAAAATGA...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKADLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTGATCTGGGGGAACCATaGACAGGGCTTCATAATTTT +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIDLGEP*TGLHNF
Trigger: AAAATTATGAAGCCCTGTTCATGGTTCCCCCAGATC...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAGGGAAGCCTTTCTTCTaGGTAAATAGTCCACGACAT +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLGKPFF*VNSPRH
Trigger: ATGTCGTGGACTATTTACTCAGAAGAAAGGCTTCCC...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCTTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LKRIAICWSKIVMHLKNFFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...GAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAAATTGCATAAAATACTaGAGCGTATCGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQNCIKY*SVSPSA
Trigger: AGCAGATGGCGATACGCTTCAGTATTTTATGCAATT...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AAAGCCAGCGGTCTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAAAGTCTGGTTTACTGTaGCTCAGTAAAATGAGACTA +
Preference number: 4 (lower is better)
Translates to: KASGLKMQEELMFQFKSKKSGLL*LSKMRL
Trigger: TAGTCTCATTTTACTGAGTCACAGTAAACCAGACTT...TTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAGACCGCTGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR GCA 90 bp ATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAATCCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCG +
Preference number: 4 (lower is better)
Translates to: MAKAQKPACAHSRTFYRILFNVE*QVPQIS
Trigger: CGATATCTGGGGAACTTGGCATTCAACATTAAAAAG...GATTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGCTTTTTAATGTTGAATaGCAAGTTCCCCAGATATCG +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMLFNVE*QVPQIS
Trigger: CGATATCTGGGGAACTTGGCATTCAACATTAAAAAG...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTATCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLSFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTAAACGGGACGTTTTTAGATTaGACATTGCCATCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FFVRHCLFLVWLTESFLNGTFLD*TLPSGL
Trigger: CAAACCAGATGGCAATGTCCAATCTAAAAACGTCCC...GTTTAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAACCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGACCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp GACGTTTTTAGATTGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTTTTCCTACATTTCCTCAGCCTTTaGCACAATGTAAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: DVFRLDIAIWFGFCLFFLHFLSL*HNVSTK
Trigger: CTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATG...TAGGAAAAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAGCTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATACTTAAGAAACACCACTaGGAATTTCATCACCAACAT +
Preference number: 4 (lower is better)
Translates to: KLWQKHRNPLVHILEHSILKKHH*EFHHQH
Trigger: ATGTTGGTGATGAAATTCCCAGTGGTGTTTCTTAAG...TATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTCTTGTTAGTGTTTGGTATCGAAGGAAGGGTTATCCCCAGTTATAAAGCTATGCTTAAGAAACACCACTaGGAATTTCATCACCAACAT +
Preference number: 4 (lower is better)
Translates to: LLLVFGIEGRVIPSYKAMLKKHH*EFHHQH
Trigger: ATGTTGGTGATGAAATTCCCAGTGGTGTTTCTTAAG...CATAGCTTTATAACTGGGGATAACCCTTCCTTCGATACCAAACACTAACAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTATGGCAAAAGCACAGAAACCCGCTTGTGCACATTCTAGAACATTCTATAGAACTTAAGAAACACCACTaGGAATTTCATCACCAACAT +
Preference number: 4 (lower is better)
Translates to: LWQKHRNPLVHILEHSIELKKHH*EFHHQH
Trigger: ATGTTGGTGATGAAATTCCCAGTGGTGTTTCTTAAG...TTCTATAGAATGTTCTAGAATGTGCACAAGCGGGTTTCTGTGCTTTTGCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAACAAATGCCTGTGGGATaGATTCTTTGTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQQMPVG*ILCLCF
Trigger: AAAACAAAGACAAAGAATTCATCCCACAGGCATTTG...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTCAAATGCCTGTGGGATaGATTCTTTGTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFQMPVG*ILCLCF
Trigger: AAAACAAAGACAAAGAATTCATCCCACAGGCATTTG...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR TCA 90 bp TCTGTAGGTGAACTGGATTTCTCTTGTGTCACTTTTGAGAAGTGTGAAAGAAGATTCTTAATTTCTTTGTaGGGCACTGCCTTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SVGELDFSCVTFEKCERRFLISL*GTAFFL
Trigger: CAAGAAAAAGGCAGTGCCTCACAAAGAAATTAAGAA...TCTTCTTTCACACTTCTCAAAAGTGACACAAGAGAAATCCAGTTCACCTACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR GCA 90 bp AGGTTTGTGACTCCCAGTATAGTGCTCTCTTGTCATTGGATACTAACACTATTTATAAAGTTCCTAGGATaGTGGAGGGAAAAAGAATCA +
Preference number: 4 (lower is better)
Translates to: RFVTPSIVLSCHWILTLFIKFLG*WREKES
Trigger: TGATTCTTTTTCCCTCCAGCATCCTAGGAACTTTAT...AAATAGTGTTAGTATCCAATGACAAGAGAGCACTATACTGGGAGTCACAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380717.7
ENST00000380718.1
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAATCATTCGCAATGACTTaGGATAAGGGCATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKSFAMT*DKGIPN
Trigger: ATTTGGAATGCCCTTATCCCAAGTCATTGCGAATGA...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAATTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKLDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCCAGTTATAAAGCTATaGCAAAAGCACAGAAACCCG +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIPVIKL*QKHRNP
Trigger: CGGGTTTCTGTGCTTTTGCCATAGCTTTATAACTGG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACCGTATCGCCATCTGCTaGTCAAAAATAGTTATGCAC +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYRIAIC*SKIVMH
Trigger: GTGCATAACTATTTTTGACCAGCAGATGGCGATACG...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTCGTATCGCCATCTGCTaGTCAAAAATAGTTATGCAC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIRIAIC*SKIVMH
Trigger: GTGCATAACTATTTTTGACCAGCAGATGGCGATACG...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
3UTR CAA 72 bp ATCTTATATTATAGAGCCAAGAGGGACGTTTTTAGATaGGACATTGCCATCTGGTTTGGGTTCTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ILYYRAKRDVFR*DIAIWFGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAATCTAAAAACGTCCCTCTTGGCTCTATAATATAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTACATGCTGTTCCAGGTaGAATCACCCCATAAATTAT +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYITCCSR*NHPINY
Trigger: ATAATTTATGGGGTGATTTCACCTGGAACAGCATGT...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR TCA 90 bp CGAAGACACATAAATACGGTTAGGCTATACCAAGCAAGAGTTGTATCTTATATTTTTGTGCCTAAGATCTaGAGATCATACAACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RRHINTVRLYQARVVSYIFVPKI*RSYNSN
Trigger: GTTGGAGTTGTATGATCTTCAGATCTTAGGCACAAA...AATATAAGATACAACTCTTGCTTGGTATAGCCTAACCGTATTTATGTGTCTTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495242.5
CDS-3UTR CCA 90 bp GAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAAAATGCATCCTGAAATaGCAGATCATATTGAATGTC +
Preference number: 4 (lower is better)
Translates to: EAYRHLLVKNSYALEKLQKCILK*QIILNV
Trigger: GACATTCAATATGATCTGCCATTTCAGGATGCATTT...TTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000303025.10
CDS-3UTR CCA 90 bp CACATAAAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACTCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: HIKLRKKTFPQPLAQCKYSFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...GTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTTTATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTTCTTTTATTTCCAAATaGGAGGAGGGAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKASFISK*EEGSHK
Trigger: TTTGTGGCTTCCCTCCTCCCATTTGGAAATAAAAGA...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAACTTCAAACTACTAAATTGGACATTGCCATCTaGTTTGGGTTCTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RHLLVKNSYALEKLQTTKLDIAI*FGFCLF
Trigger: AAACAAACAGAACCCAAACCAGATGGCAATGTCCAA...TTTAGTAGTTTGAAGTTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AAATTACGAAAGAAAACATTTCCTCAGCCTTTGGCACAATGTAAGTACAAAGCTCCTCTTGTTAGTGTTTaGTATCGAAGGAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: KLRKKTFPQPLAQCKYKAPLVSV*YRRKGY
Trigger: ATAACCCTTCCTTCGATACCAAACACTAACAAGAGG...AGCTTTGTACTTACATTGTGCCAAAGGCTGAGGAAATGTTTTCTTTCGTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp AATACTGAAGCGTATCGCCATCTGCTGGTCAAAAATAGTTATGCACTTGAAAAAGAATTTGATGTAACGTaGGACGGACAACTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NTEAYRHLLVKNSYALEKEFDVT*DGQLLN
Trigger: ATTAAGAAGTTGTCCGTCCCACGTTACATCAAATTC...TTTTTCAAGTGCATAACTATTTTTGACCAGCAGATGGCGATACGCTTCAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9
ENST00000380736.5
ENST00000495242.5
CDS-3UTR CCA 90 bp CTCAAGATGCAAGAAGAACTGATGTTTCAGTTTAAGTCCAAAGGCAGGAAAAGTAATTATATAAAGCTGTaGAGTCCCAAGATCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LKMQEELMFQFKSKGRKSNYIKL*SPKICS
Trigger: ACTACAGATCTTGGGACTCCACAGCTTTATATAATT...ACTTTTCCTGCCTTTGGACTTAAACTGAAACATCAGTTCTTCTTGCATCTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657361.1
CDS-3UTR TCA 90 bp AATTTCTTTGTGAGGCACTGCCTTTTTCTTGTTTGGTTAACTGAATCCTTTCTACAAATGCCTGTGGGATaGATTCTTTGTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: NFFVRHCLFLVWLTESFLQMPVG*ILCLCF
Trigger: AAAACAAAGACAAAGAATTCATCCCACAGGCATTTG...TAGAAAGGATTCAGTTAACCAAACAAGAAAAAGGCAGTGCCTCACAAAGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303025.10
ENST00000337414.9