Pregenerated sensors for ARHGAP5 (Homo sapiens)
Ensembl gene IDs: ENSG00000100852Ensembl transcript IDs: ENST00000345122.8, ENST00000396582.6, ENST00000433497.5, ENST00000555814.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGACTTCAACAGCAGCCTaGTTCATGCCAACATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QKDQGTWITSSNWMLEYETSTAA*FMPTSW Trigger: CCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCACAAAGATTCATGTTaGACAGACCTCACCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: QKDQGTWITSSNWMLEYEHKDSC*TDLTRS Trigger: GGATCTGGTGAGGTCTGTTCAACATGAATCTTTGTG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTCATGAAGTATACTACTaGACCCTGAAACATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVHEVYY*TLKHAC Trigger: ACATGCATGTTTCAGGGTTCAGTAGTATACTTCATG...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACACATGAAGTATACTACTaGACCCTGAAACATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTHEVYY*TLKHAC Trigger: ACATGCATGTTTCAGGGTTCAGTAGTATACTTCATG...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR-3UTR GCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTCTGAACCCTGAAACATaGATGTCTAGATTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVLNPET*MSRFAF Trigger: AAAAGCAAATCTAGACATGCATGTTTCAGGGTTCAG...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR CAA 90 bp | AACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATaGGAAGTACAATACCTAGAACTTAACAGTTGGGAGAGACAATAT | + |
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Preference number: 2 (lower is better) Translates to: NSSLVHANILVLKLK*EVQYLELNSWERQY Trigger: ATATTGTCTCTCCCAACTGTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAGACACGAACAGTTTTaGAAATTCTCTTTTCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QKDQGTWITSSNWMLEYERHEQF*KFSFQP Trigger: AGGCTGAAAAGAGAATTTTCAAAACTGTTCGTGTCT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCATCAGAAGCTTCACTaGTATTTAATTTACTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QKDQGTWITSSNWMLEYEHQKLH*YLIYCS Trigger: GCTGCAGTAAATTAAATATCAGTGAAGCTTCTGATG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAATTCCTGTGTGCTTTaGAATAGGAATAATAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: QKDQGTWITSSNWMLEYENSCVL*NRNNRD Trigger: GTCCCTATTATTCCTATTGCAAAGCACACAGGAATT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CAA 90 bp | CTTCAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTaGGAATATGAGATTAATGCTTGTACAATCCTCTCATTGTATGTA | + |
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Preference number: 2 (lower is better) Translates to: LQKDQGTWITSSNWM*EYEINACTILSLYV Trigger: TACATACAATGAGAGGATTGTACAAGCATTAATCTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CAA 90 bp | ATAATATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTaGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: IIYMYFNSSLVHANI*VLKLKLEVQYLELN Trigger: GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTATATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR-3UTR GCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACCTGAACCCTGAAACATaGATGTCTAGATTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ANILVLKLKLEVQYLELNLNPET*MSRFAF Trigger: AAAAGCAAATCTAGACATGCATGTTTCAGGGTTCAG...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGACACAAAGATTCATGTaGAACAGACCTCACCAGATC | + |
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Preference number: 3 (lower is better) Translates to: QKDQGTWITSSNWMLEYETQRFM*NRPHQI Trigger: GATCTGGTGAGGTCTGTTCAACATGAATCTTTGTGT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CCA 72 bp | ACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTaGAATATGAGATTAATGCTTGTACAATCCTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: TRVLGSHQVTGC*NMRLMLVQSSH Trigger: ATGAGAGGATTGTACAAGCATTAATCTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CCA 72 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTaGATGTTGGAATATGAGATTAATGCTTGTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: QKDQGTWITSSN*MLEYEINACTI Trigger: GATTGTACAAGCATTAATCTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR TCA 72 bp | ACATTCACAGTTCAAGGTCCCAAGAAAATGATCTGGTaGGCAAATACATATACACACTTAAAACTAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TFTVQGPKKMIW*ANTYTHLKLIW Trigger: CCAGATTAGTTTTAAGTGTGTATATGTATTTGCTCACCAGATCATTTTCTTGGGACCTTGAACTGTGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACACACGCCCCGAAACCCTaGGCCCCACGGCTCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTHAPKP*APRLPQ Trigger: CTGCGGGAGCCGTGGGGCTCAGGGTTTCGGGGCGTG...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAGCAGCACTGCAAGAATaGGAATCAAGGAAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTAALQE*ESRKGE Trigger: TTCACCCTTCCTTGATTCTCATTCTTGCAGTGCTGC...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAGAATATGAGATTCTGTaGCTCTTCCCACTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTEYEIL*LFPLLS Trigger: GGAGAGGAGTGGGAAGAGTCACAGAATCTCATATTC...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTCAGCAGCCTGGTTCATaGCAACATCTTGGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVQQPGS*QHLGSE Trigger: TTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACATTGTTTGCCAACTGCTaGCCTTGGTGCCTGAGAATT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTLFANC*PWCLRI Trigger: AATTCTCAGGCACCAAGGGCAGCAGTTGGCAAACAA...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR GCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAACTTGTTTGCCAACTaGTGCCCTTGGTGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYENLFAN*CPWCLR Trigger: TCTCAGGCACCAAGGGCAGCAGTTGGCAAACAAGTT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAACTTCAACAGCAGCCTaGTTCATGCCAACATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTTSTAA*FMPTSW Trigger: CCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTACTTCAACAGCAGCCTaGTTCATGCCAACATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVTSTAA*FMPTSW Trigger: CCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAGGGGAAGGTGCAAGGTaGGTTAATGTGAAAAACGGT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTGEGAR*VNVKNG Trigger: ACCGTTTTTCACATTAACCCACCTTGCACCTTCCCC...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAATTCGTACTCCGATaGGGCAAGAAAGTCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVKFVLR*GKKVWS Trigger: TGACCAGACTTTCTTGCCTCATCGGAGTACGAATTT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTCACAAAGATTCATGTTaGACAGACCTCACCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVHKDSC*TDLTRS Trigger: GGATCTGGTGAGGTCTGTTCAACATGAATCTTTGTG...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGACATTGCAACTTGTTTaGCAACTGCTGCCCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYETLQLV*QLLPLV Trigger: CACCAAGGGCAGCAGTTGGCAAACAAGTTGCAATGT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAAGTAAGGCGATTTaGCATCAACCGGCCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVKSKAI*HQPAED Trigger: ATCTTCGGCCGGTTGATGCCAAATCGCCTTACTTTT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAAGATCCACACTAAATaGATCTCCACACATGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTKIHTK*ISTHGA Trigger: TGCGCCATGTGTGGAGATCCATTTAGTGTGGATCTT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR GCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCAGCTTGAGCAGCACTaGAAGAATGAGAATCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEQLEQH*KNENQG Trigger: TCCTTGATTCTCATTCTTGCAGTGCTGCTCAAGCTG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAAAGACCAGGGTACTTaGATCACATCAAGTAACTGG | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTKDQGT*ITSSNW Trigger: CCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCAAGGTGGGTTAATGTaGAAAACGGTAAATGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEQGGLM*KTVNAS Trigger: ACTGGCATTTACCGTTTTTCACATTAACCCACCTTG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAGCACTGAACCTTAAATaGAACAATGGCAACATGTGT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTALNLK*NNGNMC Trigger: ACACATGTTGCCATTGTTTCATTTAAGGTTCAGTGC...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTGCACTGAACCTTAAATaGAACAATGGCAACATGTGT | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVALNLK*NNGNMC Trigger: ACACATGTTGCCATTGTTTCATTTAAGGTTCAGTGC...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAATCTACTGAAAGTGTaGAACAGAGTACCACTATGC | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVNLLKV*NRVPLC Trigger: GCATAGTGGTACTCTGTTTCACACTTTCAGTAGATT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTGCAGCATCCTGTAGGTaGAGCACAAAAATTACATTA | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVAASCR*STKITL Trigger: TAATGTAATTTTTGTGCTTCACCTACAGGATGCTGC...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAAGGTCCCAAGAAAATaGTCTGGTGAGCAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTKVPRK*SGEQIH Trigger: ATGTATTTGCTCACCAGATCATTTTCTTGGGACCTT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCATGAAGTATACTACTaGACCCTGAAACATGCATGT | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEHEVYY*TLKHAC Trigger: ACATGCATGTTTCAGGGTTCAGTAGTATACTTCATG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAGACACGAACAGTTTTaGAAATTCTCTTTTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTRHEQF*KFSFQP Trigger: AGGCTGAAAAGAGAATTTTCAAAACTGTTCGTGTCT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAGAATCAAGGAAGGGTaGAAGAATAAGATCCACACT | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYERIKEG*KNKIHT Trigger: AGTGTGGATCTTATTCTTTCACCCTTCCTTGATTCT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAGGTATGATAATATTGTaGTCTGTATTCGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTGMIIL*SVFASF Trigger: AAAGGAGGCGAATACAGATCACAATATTATCATACC...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTCATCAGAAGCTTCACTaGTATTTAATTTACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVHQKLH*YLIYCS Trigger: GCTGCAGTAAATTAAATATCAGTGAAGCTTCTGATG...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATGATGAGGATCAATTaGATAGTGAAGACTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTMMRIN*IVKTPK Trigger: TTTGGGAGTCTTCACTATTCAATTGATCCTCATCAT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACGAATATGAGATTCTGTaGCTCTTCCCACTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNEYEIL*LFPLLS Trigger: GGAGAGGAGTGGGAAGAGTCACAGAATCTCATATTC...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAAGGTCCCAAGAAAATaGTCTGGTGAGCAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEKVPRK*SGEQIH Trigger: ATGTATTTGCTCACCAGATCATTTTCTTGGGACCTT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACCAGCAGCCTGGTTCATaGCAACATCTTGGTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNQQPGS*QHLGSE Trigger: TTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR GCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAATTCCTGTGTGCTTTaGAATAGGAATAATAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVNSCVL*NRNNRD Trigger: GTCCCTATTATTCCTATTGCAAAGCACACAGGAATT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACATTGGCTAACTTAGATTaGGGTTACCTGCAGTATTTA | + |
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Preference number: 4 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTLANLD*GYLQYL Trigger: TAAATACTGCAGGTAACCGCAATCTAAGTTAGCCAA...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTTTGGCTAACTTAGATTaGGGTTACCTGCAGTATTTA | + |
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Preference number: 4 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVLANLD*GYLQYL Trigger: TAAATACTGCAGGTAACCGCAATCTAAGTTAGCCAA...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CAA 72 bp | GACCAGGGTACTTGGATCACATCAAGTAACTGGATGTaGGAATATGAGATTAATGCTTGTACAATCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: DQGTWITSSNWM*EYEINACTILS Trigger: TGAGAGGATTGTACAAGCATTAATCTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCAAATTGTGTTTAACTaGTTCCAATACTCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEQIVFN*FQYSSE Trigger: CTCAGAGGAGTATTGGAATCAGTTAAACACAATTTG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGATGATGAGGATCAATTaGATAGTGAAGACTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYEMMRIN*IVKTPK Trigger: TTTGGGAGTCTTCACTATTCAATTGATCCTCATCAT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGCTGAACCCTGAAACATaGATGTCTAGATTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QKDQGTWITSSNWMLEYELNPET*MSRFAF Trigger: AAAAGCAAATCTAGACATGCATGTTTCAGGGTTCAG...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| 3UTR CAA 72 bp | ATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTaGGTTCTGAAGTTAAAATTGGAAGTACAATACCTA | + |
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Preference number: 4 (lower is better) Translates to: MYFNSSLVHANI*VLKLKLEVQYL Trigger: TAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACCAAGGTGGGTTAATGTaGAAAACGGTAAATGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNQGGLM*KTVNAS Trigger: ACTGGCATTTACCGTTTTTCACATTAACCCACCTTG...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACAAAGACCAGGGTACTTaGATCACATCAAGTAACTGG | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNKDQGT*ITSSNW Trigger: CCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACAATCTACTGAAAGTGTaGAACAGAGTACCACTATGC | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNNLLKV*NRVPLC Trigger: GCATAGTGGTACTCTGTTTCACACTTTCAGTAGATT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACGCAGCATCCTGTAGGTaGAGCACAAAAATTACATTA | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNAASCR*STKITL Trigger: TAATGTAATTTTTGTGCTTCACCTACAGGATGCTGC...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACATCATCACTGGCATCTaGATGTGTTCTTCTATAGTA | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNIITGI*MCSSIV Trigger: TACTATAGAAGAACACATTCAGATGCCAGTGATGAT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR TCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACCATCAGAAGCTTCACTaGTATTTAATTTACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNHQKLH*YLIYCS Trigger: GCTGCAGTAAATTAAATATCAGTGAAGCTTCTGATG...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR GCA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACAATTCCTGTGTGCTTTaGAATAGGAATAATAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ANILVLKLKLEVQYLELNNSCVL*NRNNRD Trigger: GTCCCTATTATTCCTATTGCAAAGCACACAGGAATT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS GCA 90 bp | TCCTCCTCAGTCCCATCCTCCACGCTTTGGAAGCTACTGCCTTACTaGCCGGAGCGCCGTCGTCCCCGAACCTCCCCTGCTTCTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: SSSVPSSTLWKLLPY*PERRRPRTSPASPF Trigger: AAAGGGAGAAGCAGGGGAGGTTCGGGGACGACGGCGCTCCGGGCAGTAAGGCAGTAGCTTCCAAAGCGTGGAGGATGGGACTGAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555814.1 |
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| CDS-3UTR CAA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTGACATTGCAACTTGTTaGCCAACTGCTGCCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVDIATC*PTAALG Trigger: ACCAAGGGCAGCAGTTGGCAAACAAGTTGCAATGTC...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAAAGGACATTGCAACTaGTTTGCCAACTGCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTKGHCN*FANCCP Trigger: AGGGCAGCAGTTGGCAAACAAGTTGCAATGTCCTTT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATTATTCTGTCCAGCTaGAGCAGCACTGCAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTIILSS*SSTARM Trigger: CATTCTTGCAGTGCTGCTCAAGCTGGACAGAATAAT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345122.8 |
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| CDS-3UTR CAA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTACACAAAGATTCATGTaGAACAGACCTCACCAGATC | + |
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Preference number: 5 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVTQRFM*NRPHQI Trigger: GATCTGGTGAGGTCTGTTCAACATGAATCTTTGTGT...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAAGACACGAACAGTTTaGAAAATTCTCTTTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTKTRTV*KILFSA Trigger: GGCTGAAAAGAGAATTTTCAAAACTGTTCGTGTCTT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CAA 90 bp | ATACATGTACTTCAACAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTTGTACAATCCTCTCATaGTATGTAAAGATGCTATCC | + |
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Preference number: 5 (lower is better) Translates to: IHVLQQQPGSCQHLGSEVCTILS*YVKMLS Trigger: GGATAGCATCTTTACATACAATGAGAGGATTGTACA...AACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTGTTGAAGTACATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACATGTACAATCCTCTCATaGTATGTAAAGATGCTATCC | + |
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Preference number: 5 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTCTILS*YVKMLS Trigger: GGATAGCATCTTTACATACAATGAGAGGATTGTACA...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTGGTTCATGCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAAATGATGAGGATCAATaGAATAGTGAAGACTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: QQPGSCQHLGSEVKIGSTNDEDQ*NSEDSQ Trigger: TTGGGAGTCTTCACTATTCAATTGATCCTCATCATT...TGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGCATGAACCAGGCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR CAA 90 bp | CAAAAAGACCAGGGTACTTGGATCACATCAAGTAACTGGATGTTGGAATATGAGAAGACACGAACAGTTTaGAAAATTCTCTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKDQGTWITSSNWMLEYEKTRTV*KILFSA Trigger: GGCTGAAAAGAGAATTTTCAAAACTGTTCGTGTCTT...CTCATATTCCAACATCCAGTTACTTGATGTGATCCAAGTACCCTGGTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS-3UTR CAA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACTTTTATCCGGGATTTTaGCTGCTTCCAATAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANILVLKLKLEVQYLELNFYPGF*LLPIVL Trigger: CAGAACTATTGGAAGCAGCAAAAATCCCGGATAAAA...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CAA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACAAGACACGAACAGTTTaGAAAATTCTCTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANILVLKLKLEVQYLELNKTRTV*KILFSA Trigger: GGCTGAAAAGAGAATTTTCAAAACTGTTCGTGTCTT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000345122.8 ENST00000396582.6 ENST00000433497.5 |
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| CDS-3UTR CAA 90 bp | GCCAACATCTTGGTTCTGAAGTTAAAATTGGAAGTACAATACCTAGAACTTAACAATGATGAGGATCAATaGAATAGTGAAGACTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ANILVLKLKLEVQYLELNNDEDQ*NSEDSQ Trigger: TTGGGAGTCTTCACTATTCAATTGATCCTCATCATT...GTTAAGTTCTAGGTATTGTACTTCCAATTTTAACTTCAGAACCAAGATGTTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345122.8 ENST00000396582.6 |
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| CDS GCA 72 bp | GTCCCATCCTCCACGCTTTGGAAGCTACTGCCTTACTaGCCGGAGCGCCGTCGTCCCCGAACCTCCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VPSSTLWKLLPY*PERRRPRTSPA Trigger: AGCAGGGGAGGTTCGGGGACGACGGCGCTCCGGGCAGTAAGGCAGTAGCTTCCAAAGCGTGGAGGATGGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555814.1 |
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| CDS GCA 72 bp | CCTCCTCAGTCCCATCCTCCACGCTTTGGAAGCTACTaGCTTACTGCCCGGAGCGCCGTCGTCCCCGAACCT | + |
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Preference number: 6 (lower is better) Translates to: PPQSHPPRFGSY*LTARSAVVPEP Trigger: AGGTTCGGGGACGACGGCGCTCCGGGCAGTAAGGCAGTAGCTTCCAAAGCGTGGAGGATGGGACTGAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555814.1 |
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