RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP35 (Homo sapiens)

Ensembl gene IDs: ENSG00000160007

Ensembl transcript IDs: ENST00000404338.8, ENST00000595822.1, ENST00000596593.1, ENST00000598548.1, ENST00000599284.1, ENST00000614079.1, ENST00000672722.1

Found 1451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGACAGACCGCCTCCTGCTCTGTCCCCCGCGCGCGCCGCGCATTaGCCACGCTGCACCGACCGCACCGCGGCCGCGCCCCCACCGGAC +
Preference number: 1 (lower is better)
Translates to: GDRPPPALSPARAAH*PRCTDRTAAAPPPD
Trigger: GTCCGGTGGGGGCGCGGCCGCGGTGCGGTCGGTGCAGCGTGGCCAATGCGCGGCGCGCGCGGGGGACAGAGCAGGAGGCGGTCTGTCACC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 90 bp CCACTCCCGTCTCCAACCACTGCAGGCGGGCACGGGCAGGGCAGCTaGAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACAC +
Preference number: 1 (lower is better)
Translates to: PLPSPTTAGGHGQGS*RRPGKVSIRPPGIH
Trigger: GTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTGCAGTGGTTGGAGACGGGAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp CTCTGTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCT +
Preference number: 1 (lower is better)
Translates to: LCGSHASAHLGCTLP*PDAEGRPATTGHAP
Trigger: AGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp CCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTaGCCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: PPDPRQKLPPSWATF*PGHRRCPPREGAHP
Trigger: GGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp TGCAGAGCCAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTT +
Preference number: 1 (lower is better)
Translates to: CRASALSRYLVVAEP*PTRSQGGRQPGCTL
Trigger: AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTGGCTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp CCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTaGAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGA +
Preference number: 1 (lower is better)
Translates to: PCKCPFGLHASLTGR*RPACHDWPCPSNDR
Trigger: TCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp AGAGGGAGGCACCCGGAGGCTGGTGTGAGCAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAGGGCACTGGAGCCATTGCCTGCCTA +
Preference number: 1 (lower is better)
Translates to: RGRHPEAGVSSYVGW*SREQREGTGAIACL
Trigger: TAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp TCGCAGCAGGTGCCCTGCCTCCAGCAGGAAGCAAAACCAAGGCGGTaGAGGCAGGAGAGCACGGAGACAGACGCCCCGAAGCTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: SQQVPCLQQEAKPRR*RQESTETDAPKLSP
Trigger: GGGAGAGAGCTTCGGGGCGTCTGTCTCCGTGCTCTCCTGCCTCCACCGCCTTGGTTTTGCTTCCTGCTGGAGGCAGGGCACCTGCTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp ACCATGGGCTCTGTACAAGCAGAGGGAGGCACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGTGGTCCAGGGAACAGAGGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: TMGSVQAEGGTRRLV*AATWGGGPGNRGRA
Trigger: TGCCCTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTCCCTCTGCTTGTACAGAGCCCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GCCTGCCTAGTTCAGTCCTCAAATGGGTCCAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTACCTGGCAGCCCAGCCGATGGTACC +
Preference number: 1 (lower is better)
Translates to: ACLVQSSNGSKPAQV*SARPRVPGSPADGT
Trigger: GGTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACTAGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp TCCCGACCATGGGCTCTGTACAAGCAGAGGGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGGGTGGTGGTCCAGGGAACAGAGGGA +
Preference number: 1 (lower is better)
Translates to: SRPWALYKQREAPGG*CEQLRGVVVQGTEG
Trigger: TCCCTCTGTTCCCTGGACCACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTCCCTCTGCTTGTACAGAGCCCATGGTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp AGGTGCTCCTCCTCACCACCCCCTCCACACTCCTGGGGAAGTCACTaGCCGCACATACATCTGTGGAATCGGGCCAGGTGGCTTGGGACG +
Preference number: 1 (lower is better)
Translates to: RCSSSPPPPHSWGSH*PHIHLWNRARWLGT
Trigger: CGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGAGTGTGGAGGGGGTGGTGAGGAGGAGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTC +
Preference number: 1 (lower is better)
Translates to: GSVSSSSEGDWAAFA*VHTGTAQGTTMLSL
Trigger: GAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCCCTCACACGGTGTCTGCGCTCTCGC +
Preference number: 1 (lower is better)
Translates to: GLPSSAVRARISLWL*TKGCCPLTRCLRSR
Trigger: GCGAGAGCGCAGACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp GCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTCTaGCTTTGCACCAAGGGCTGCTGTCCCCTCACACGGTGTCTGCGC +
Preference number: 1 (lower is better)
Translates to: ALGLPSSAVRARISL*LCTKGCCPLTRCLR
Trigger: GCGCAGACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GGGTGGTGGTCCAGGGAACAGAGGGAGGGCACTGGAGCCATTGCCTaGCTAGTTCAGTCCTCAAATGGGTCCAAGCCAGCTCAGGTCTGC +
Preference number: 1 (lower is better)
Translates to: GWWSREQREGTGAIA*LVQSSNGSKPAQVC
Trigger: GCAGACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGTTCCCTGGACCACCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CGTGGGGTGGTGGTCCAGGGAACAGAGGGAGGGCACTGGAGCCATTaGCTGCCTAGTTCAGTCCTCAAATGGGTCCAAGCCAGCTCAGGT +
Preference number: 1 (lower is better)
Translates to: RGVVVQGTEGGHWSH*LPSSVLKWVQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGTTCCCTGGACCACCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATaGCCCTTCGAGGGCACCAGCAGACCGCCATTCCTTCAAAGTGCC +
Preference number: 1 (lower is better)
Translates to: DMQAQRLWVSEDQEG*PFEGTSRPPFLQSA
Trigger: GGCACTTTGAAGGAATGGCGGTCTGCTGGTGCCCTCGAAGGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 90 bp AACCCTGTGGCTTCCTGTGCATGGGGGCTCCCTTTGGACATAAGCTaGCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCAT +
Preference number: 1 (lower is better)
Translates to: NPVASCAWGLPLDIS*HSPCLPTLADKALH
Trigger: ATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCTTATGTCCAAAGGGAGCCCCCATGCACAGGAAGCCACAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp GTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATaGTGGCTTGACCCAGGCCTCCTTTCCCTAAGAGCAGCAGGAGCT +
Preference number: 1 (lower is better)
Translates to: VSRMPGGLRGSLPRG*WLDPGLLSLRAAGA
Trigger: AGCTCCTGCTGCTCTTAGGGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp GAGCAGCTACGTGGGGTGGTGGTCCAGGGAACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGTTCAGTCCTCAAATGGGTCCAAGCC +
Preference number: 1 (lower is better)
Translates to: EQLRGVVVQGTEGGH*SHCLPSSVLKWVQA
Trigger: GGCTTGGACCCATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp GCACAGGGATGCCCCCATCCCCTTCTGGCCAGCGAGCTGCTCCTATaGTGTCACCCTCTGTCCACCGTGACAAAGACAGACACATCCTGC +
Preference number: 1 (lower is better)
Translates to: AQGCPHPLLASELLL*CHPLSTVTKTDTSC
Trigger: GCAGGATGTGTCTGTCTTTGTCACGGTGGACAGAGGGTGACATCATAGGAGCAGCTCGCTGGCCAGAAGGGGATGGGGGCATCCCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGAGACAGACCAACAGGAAGTGTTCTC +
Preference number: 1 (lower is better)
Translates to: PRRPPAGLYPYLGGV*RWKVGRDRPTGSVL
Trigger: GAGAACACTTCCTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CACTCTCTGGGTCCAGGCACAAAGCTATCCTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCG +
Preference number: 1 (lower is better)
Translates to: HSLGPGTKLSSVVLI*RASALSRYLVVAEP
Trigger: CGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATAGCTTTGTGCCTGGACCCAGAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp TGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTaGGAGTGCCCCAGACCTAGTTTCAGGTACTTCTGTGAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: CHSPCLPTLADKALH*ECPRPSFRYFCEER
Trigger: CCTCTCCTCACAGAAGTACCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp CAGACCGCCATTCCTTCAAAGTGCCCCACCTCGCCCACATCCCCATaGACACTCCTGCTGGTGGCCTCCATGGCTGGGATGAAACGATTC +
Preference number: 1 (lower is better)
Translates to: QTAIPSKCPTSPTSP*TLLLVASMAGMKRF
Trigger: GAATCGTTTCATCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGAGGTGGGGCACTTTGAAGGAATGGCGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CCA 90 bp AGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGACCAACAGGAAGTGTTCTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: RPPAGLYPYLGGVCR*KVGRDRPTGSVLFR
Trigger: CCTGAAGAGAACACTTCCTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 90 bp CAAACGACCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGGGGAAACAAGAGGAACCCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: QTTEMSSSPSARSSR*EAEVSGGNKRNPVA
Trigger: AGCCACAGGGTTCCTCTTGTTTCCCCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGGTCGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CACCCAGTGCTGAGAGCTGCATGCGAGTCCCATGAGCACCCTCTGTaGACACACCTTCCAGAACTTAGAGCCCCAACAAAAGCGGGAGTG +
Preference number: 1 (lower is better)
Translates to: HPVLRAACESHEHPL*THLPELRAPTKAGV
Trigger: CACTCCCGCTTTTGTTGGGGCTCTAAGTTCTGGAAGGTGTGTGCACAGAGGGTGCTCATGGGACTCGCATGCAGCTCTCAGCACTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp CAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAGGAAGTGTTCTCTTCAGGGGTTGCC +
Preference number: 1 (lower is better)
Translates to: QPGCTLTLGVCADGR*EETDQQEVFSSGVA
Trigger: GGCAACCCCTGAAGAGAACACTTCCTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACACACCCCCAAGGTAAGGGTACAGCCCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp CTCCTAGTGTTCCTTTGTTTGCCAGGGAATGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATGAAGCGGGGAGTCCCACACTCTCTG +
Preference number: 1 (lower is better)
Translates to: LLVFLCLPGNVSGRL*SGTVGMKRGVPHSL
Trigger: CAGAGAGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCACTCCACAGCCTTCCCGAAACATTCCCTGGCAAACAAAGGAACACTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp GCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTaGAATACACCACAGATCCTATTTCTTAAAGTGCAACGAGCCCCA +
Preference number: 1 (lower is better)
Translates to: AGQLQTPGKGVHQAP*NTPQILFLKVQRAP
Trigger: TGGGGCTCGTTGCACTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATaGAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACAAGCC +
Preference number: 1 (lower is better)
Translates to: PCSSPNARRWERRGQ*RVNVCRDTQYATQA
Trigger: GGCTTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATaGCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTG +
Preference number: 1 (lower is better)
Translates to: FVCVCVCVCVCACPE*LVACGGLYQGDAGL
Trigger: CAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACACACACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp CTCGCCCACATCCCCATGAACACTCCTGCTGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTTCAACACCCAACACACCAACCCCAA +
Preference number: 1 (lower is better)
Translates to: LAHIPMNTPAGGLHG*DETIPLQHPTHQPQ
Trigger: TTGGGGTTGGTGTGTTGGGTGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 90 bp CCTGCTGTGAAGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGG +
Preference number: 1 (lower is better)
Translates to: PAVKFCVCVCVCVCV*VSRMPGGLRGSLPR
Trigger: CCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACACACACAAAACTTCACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp TGGCCGCACATACATCTGTGGAATCGGGCCAGGTGGCTTGGGACGTaGCTTTTGTGCTCACACAAAAGAGGTGGCAGTGTTAGCTCAAGC +
Preference number: 1 (lower is better)
Translates to: WPHIHLWNRARWLGT*LLCSHKRGGSVSSS
Trigger: GCTTGAGCTAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp GTGTGCCGTGACACCCAGTATGCGACACAAGCCAAGAATTCTAAGTaGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: VCRDTQYATQAKNSK*IHEPRHPALGLPSS
Trigger: TGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCACTTAGAATTCTTGGCTTGTGTCGCATACTGGGTGTCACGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp ATACATCTGTGGAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: IHLWNRARWLGTWLL*SHKRGGSVSSSSEG
Trigger: CCCCTCACTGCTTGAGCTAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 90 bp AAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: KAVKLARLGVSKHLR*PLRTGDSEPAVPRG
Trigger: CCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp AACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAAATGTGTaGCGTGACACCCAGTATGCGACACAAGCCAAGAATTCTAAGTGG +
Preference number: 1 (lower is better)
Translates to: NARRWERRGQCRVNV*RDTQYATQAKNSKW
Trigger: CCACTTAGAATTCTTGGCTTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 90 bp CTGGGTTTGTTCTCCGATTTGTGTTCCTCAAAAGGCGGTAAAACTTaGAAGGTTAGGTGTTTCCAAGCACCTTCGTTGGCCATTGAGAAC +
Preference number: 1 (lower is better)
Translates to: LGLFSDLCSSKGGKT*KVRCFQAPSLAIEN
Trigger: GTTCTCAATGGCCAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAATCGGAGAACAAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGGCCGTTTCCTCATCTaGTGGGGTCCAGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPGRFLI*WGPGLG
Trigger: CCCCAGCCCTGGACCCCAGCAGATGAGGAAACGGCC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAKPAQV*SARPRV
Trigger: TACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTT...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTCAGCTCCACCTGTGTaGCTCCCTCCCTCCCGGCAG +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSSAPPV*LPPSRQ
Trigger: CTGCCGGGAGGGAGGGAGGCACACAGGTGGAGCTGA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGG +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPGCTLP*PDAEGR
Trigger: CCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCCCGTCTCCAACCACTaGAGGCGGGCACGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPPVSNH*RRARAG
Trigger: CCCTGCCCGTGCCCGCCTGCAGTGGTTGGAGACGGG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCCCTGTGGCTTCCTGTaGATGGGGGCTCCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPPCGFL*MGAPFG
Trigger: TCCAAAGGGAGCCCCCATGCACAGGAAGCCACAGGG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTCCCACGTCCCCATTCTaGACAAGCCAACGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSPTSPF*TSQRPP
Trigger: GGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGG...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGG +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTGCTLP*PDAEGR
Trigger: CCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGG +
Preference number: 2 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGEAPGG*CEQLRG
Trigger: CCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTC...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCGCGACTAGACCTAAGTaGGTGAGTGGGACCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAATRPK*VSGTPA
Trigger: TGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGC...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTAGGGACGCTCCTCTGTaGCTCCCATGCAAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSRDAPL*LPCKCP
Trigger: TGGGCACTTGCATGGGAGCCACAGAGGAGCGTCCCT...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCTCCCACTGAGGTCTTaGGAAGGTAATGGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: QAGTGRAAADARERCPSGLPLRS*EGNGES
Trigger: GCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAG...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCCCTCACACGGTGTCTaGGCTCTCGCTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVPSHGV*ALAGQG
Trigger: CCCCTGCCCAGCGAGAGCGCAGACACCGTGTGAGGG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCTGGGTCGCAGCAGGTaGCCTGCCTCCAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPLGRSR*PASSRK
Trigger: CTTCCTGCTGGAGGCAGGGCACCTGCTGCGACCCAG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 2 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSSSEGD*AAFACV
Trigger: AACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCT...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTCCTGCAGAAGAATCTaGGTCGCAGCAGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSSCRRI*VAAGAL
Trigger: CAGGGCACCTGCTGCGACCCAGATTCTTCTGCAGGA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVTRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQTRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRETRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTCGCCCACATCCCCATaGACACTCCTGCTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHASPTSP*TLLLVA
Trigger: GGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGA...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCACAGAAAACACGCCTaGACCCTGGGTTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPHRKHA*TLGLFS
Trigger: GGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCGCATCCTGGTTTTGCTaGCACAAAGACGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAASWFC*HKDEGQ
Trigger: CTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGC...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 2 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGG +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREEAPGG*CEQLRG
Trigger: CCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCCACTAGCTCTCGCCTaGGGGGTGCCTAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSPLALA*GVPSVR
Trigger: CCTGACACTAGGCACCCCCCAGGCGAGAGCTAGTGG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTCCAAACGCTAGGCGATaGGAAAGACGGGGACAATGC +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSPNARR*ERRGQC
Trigger: GCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGG...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTCGCCCACATCCCCATaGACACTCCTGCTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFSPTSP*TLLLVA
Trigger: GGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCCACCCCCAATTACGTaGGGAGCTGACCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSPPPIT*GADQVS
Trigger: GCTCACCTGGTCAGCTCCTCACGTAATTGGGGGTGG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVKPAQV*SARPRV
Trigger: TACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSYLGGV*RWKVGR
Trigger: TCTTCCCACCTTCCATCTGCACACACCCCCAAGGTA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGTCAGCTCCACCTGTGTaGCTCCCTCCCTCCCGGCAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGSAPPV*LPPSRQ
Trigger: CTGCCGGGAGGGAGGGAGGCACACAGGTGGAGCTGA...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACACGGGCAGGGCAGCTaGAGACGCCCGGGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPHGQGS*RRPGKV
Trigger: CACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCC +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSWAAFA*VHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCAGTGAGGCACAGGGATaGCCCCATCCCCTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFSEAQG*PHPLLA
Trigger: GGCCAGAAGGGGATGGGGGCATCCCTGTGCCTCACT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCTGCCTCTGTCCCCAGTaGACTTGGTTTTGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: QAGTGRAAADARERCPSGCLCPQ*TWFCSR
Trigger: CCTTGAACAAAACCAAGTCCACTGGGGACAGAGGCA...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCATGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SCHSPCLPTLADKALHWESYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTGCTGTACCCTTACCTTaGGGGTGTGTGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSAVPLP*GCVQME
Trigger: TTCCATCTGCACACACCCCCAAGGTAAGGGTACAGC...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGGGCAGTGGGAAGGCTaGGCTAGGGTGGTGGTGGAT +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREGQWEG*ARVVVD
Trigger: ATCCACCACCACCCTAGCCCAGCCTTCCCACTGCCC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTCGGGCCAGGTGGCTTaGGACGTGGCTTTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: SCHSPCLPTLADKALHWESGQVA*DVAFVL
Trigger: GAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 90 bp GGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTCTGGCTTaGCACCAAGGGCTGCTGTCCCCTCACACGGTGTCTGCGCTCTCG +
Preference number: 2 (lower is better)
Translates to: GSSLFSRQSQDQSLA*HQGLLSPHTVSALS
Trigger: CGAGAGCGCAGACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCTTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCTAGACCTAAGTGGGTaGGTGGGACCCCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPLDLSG*VGPQQA
Trigger: GGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGCCTGCCCACCTTGGCTaGCAAGGCGCTGCATTGGGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGPAHLG*QGAALG
Trigger: TCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGG...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTGGTGGTGGATGATATaGAGGCACAGCGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAWWWMI*RHSASG
Trigger: CCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGGACTGGGCTGCTTTTaGCTGCGTTCACACAGGGAC +
Preference number: 2 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRGLGCF*LRSHRD
Trigger: GTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCGCGCTGCATTGGGAGTaGCCCAGACCTAGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSALHWE*PRPSFR
Trigger: CCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGC...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGACCTTTGGACATAAGCTaGCACAGTCCCTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRPLDIS*HSPCLP
Trigger: GGGCAGGCAGGGACTGTGGCAGCTTATGTCCAAAGG...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHASRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPTEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVSYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPEAPGG*CEQLRG
Trigger: CCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRALSRP*ALYKQR
Trigger: CCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCCAGCTCCAGGCATCCTaGTTTTGCTGCCACAAAGAC +
Preference number: 2 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCQLQAS*FCCHKD
Trigger: GTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTG...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCAACCCCAAGTGCACCTaGCACCTTCCAGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTNPKCT*HLPAVP
Trigger: GGGGACAGCTGGAAGGTGCCAGGTGCACTTGGGGTT...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCCAGGCACAGCGCCTCTaGGTCAGCGAAGACCAGGAA +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFQAQRL*VSEDQE
Trigger: TTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTG...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCAACACGCCTGAACCCTaGGTTTGTTCTCCGATTTGT +
Preference number: 2 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPNTPEP*VCSPIC
Trigger: ACAAATCGGAGAACAAACCCAGGGTTCAGGCGTGTT...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGCTGGGGTCCAGGGCTaGGGGAGTTTGGGAACGTTT +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTAGVQG*GSLGTF
Trigger: AAACGTTCCCAAACTCCCCCAGCCCTGGACCCCAGC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGGCGGGGTCAGTAAATaGGGCCGTTTCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLGGVSK*GRFLIC
Trigger: GCAGATGAGGAAACGGCCCCATTTACTGACCCCGCC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTT +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSSSEGD*AAFACV
Trigger: AACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGGAGTGGGGGCAGCATaGTCCCAACAATCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGGVGAA*SQQSPG
Trigger: CCCTGGGGATTGTTGGGACCATGCTGCCCCCACTCC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTaGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTT +
Preference number: 2 (lower is better)
Translates to: EVAVLAQAVRGTGLL*PAFTQGRPRAPPCF
Trigger: AAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTCTCCCACTGAGGTCTTaGGAAGGTAATGGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCLPLRS*EGNGES
Trigger: GCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAG...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGGCTGGTGCTCCCACTaGGGTCTTGAGAAGGTAATG +
Preference number: 2 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCGWCSH*GLEKVM
Trigger: CATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTATCCTCCGTTGTTCTaGTCTGCAGAGCCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVYPPLF*SAEPAP
Trigger: GGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATA...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACTAGACCTAAGTGGGTaGGTGGGACCCCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPLDLSG*VGPQQA
Trigger: GGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRARSSR*EAEVSG
Trigger: CCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGTGGTGGTGGATGATATaGAGGCACAGCGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREWWWMI*RHSASG
Trigger: CCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATGGCATGGGGCCCTCTaGACCCCACTAGCTCTCGCC +
Preference number: 2 (lower is better)
Translates to: PCSSPNARRWERRGQCRVWHGAL*TPLALA
Trigger: GGCGAGAGCTAGTGGGGTGCAGAGGGCCCCATGCCA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGTGGCATGGGGCCCTCTaGACCCCACTAGCTCTCGCC +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWWHGAL*TPLALA
Trigger: GGCGAGAGCTAGTGGGGTGCAGAGGGCCCCATGCCA...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCC +
Preference number: 2 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRWAAFA*VHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTCGCAGCAGGTGCCCTaGCTCCAGCAGGAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTSQQVP*LQQEAK
Trigger: TTTTGCTTCCTGCTGGAGGCAGGGCACCTGCTGCGA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCCACTAGCTCTCGCCTaGGGGGTGCCTAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACPLALA*GVPSVR
Trigger: CCTGACACTAGGCACCCCCCAGGCGAGAGCTAGTGG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGAAGGGCTGTCTGGCATaGGGCCCTCTGCACCCCACT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRKGCLA*GPLHPT
Trigger: AGTGGGGTGCAGAGGGCCCCATGCCAGACAGCCCTT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGGCGGGGTCAGTAAATaGGGCCGTTTCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTGGVSK*GRFLIC
Trigger: GCAGATGAGGAAACGGCCCCATTTACTGACCCCGCC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATCGGGCCAGGTGGCTTaGGACGTGGCTTTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRSGQVA*DVAFVL
Trigger: GAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTCCTGCAGAAGAATCTaGGTCGCAGCAGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTSCRRI*VAAGAL
Trigger: CAGGGCACCTGCTGCGACCCAGATTCTTCTGCAGGA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGCCCCCATCCCCTTCTaGCCAGCGAGCTGCTCCTAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRAPIPF*PASCSY
Trigger: ATAGGAGCAGCTCGCTGGCCAGAAGGGGATGGGGGC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCTATCCTCCGTTGTTCTaGTCTGCAGAGCCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPYPPLF*SAEPAP
Trigger: GGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATA...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGCTAGACCTAAGTGGGTaGGTGGGACCCCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWLDLSG*VGPQQA
Trigger: GGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAG...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCACCTTCGTTGGCCATTaGGAACTGGAGACAGTGAGC +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSTFVGH*ELETVS
Trigger: GCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCCACCCCCAATTACGTaGGGAGCTGACCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACPPPIT*GADQVS
Trigger: GCTCACCTGGTCAGCTCCTCACGTAATTGGGGGTGG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGCATCCTGGTTTTGCTaGCACAAAGACGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLASWFC*HKDEGQ
Trigger: CTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGAAGACCAGGAAGGATaGCCCTTCGAGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLREDQEG*PFEGTS
Trigger: GCTGGTGCCCTCGAAGGGGCATCCTTCCTGGTCTTC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPGTWLL*SHKRGG
Trigger: GCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFISLWL*TKGCCP
Trigger: GGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGAT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 2 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPATEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPALSRP*ALYKQR
Trigger: CCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGC...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTGCTGTACCCTTACCTTaGGGGTGTGTGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAAVPLP*GCVQME
Trigger: TTCCATCTGCACACACCCCCAAGGTAAGGGTACAGC...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCAGCTCCAGGCATCCTaGTTTTGCTGCCACAAAGAC +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSQLQAS*FCCHKD
Trigger: GTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTT +
Preference number: 2 (lower is better)
Translates to: SCHSPCLPTLADKALHWEGGLHG*DETIPL
Trigger: AAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACC...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCCGCACATACATCTGTaGAATCGGGCCAGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: PECLVACGGLYQGDAGLTPHIHL*NRARWL
Trigger: AAGCCACCTGGCCCGATTCCACAGATGTATGTGCGG...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTCCTCCATGGCTGGGATaGAACGATTCCACTTCAACA +
Preference number: 2 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPPPWLG*NDSTST
Trigger: TGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGG...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCACCTTCGTTGGCCATTaGGAACTGGAGACAGTGAGC +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFTFVGH*ELETVS
Trigger: GCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAAATTACGTGAGGAGCTaGCCAGGTGAGCATAACCTC +
Preference number: 2 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRNYVRS*PGEHNL
Trigger: GAGGTTATGCTCACCTGGTCAGCTCCTCACGTAATT...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAATTACGTGAGGAGCTaGCCAGGTGAGCATAACCTC +
Preference number: 2 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSNYVRS*PGEHNL
Trigger: GAGGTTATGCTCACCTGGTCAGCTCCTCACGTAATT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFYLGGV*RWKVGR
Trigger: TCTTCCCACCTTCCATCTGCACACACCCCCAAGGTA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCATCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAACCCCAACCCCAAGTaGACCTGGCACCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPNPNPK*TWHLPA
Trigger: AGCTGGAAGGTGCCAGGTGCACTTGGGGTTGGGGTT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGGCCACAGCCCAGCCATaGAAGTTTGAGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWATAQP*KFEVLG
Trigger: CCCCAGCACCTCAAACTTGCATGGCTGGGCTGTGGC...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGACTGGGCTGCTTTTaGCTGCGTTCACACAGGGAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRGLGCF*LRSHRD
Trigger: GTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTATGGCTGACAAGGCGCTaGATTGGGAGTGCCCCAGAC +
Preference number: 2 (lower is better)
Translates to: PRCPLVPQPGAADERLKLWLTRR*IGSAPD
Trigger: GTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCA...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACCTCTGTGGCTCCCATaGAAGTGCCCATTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPPLWLP*KCPFGL
Trigger: CAGCCCAAATGGGCACTTGCATGGGAGCCACAGAGG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTSRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: PCSSPNARRWERRGQCRVWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAG +
Preference number: 2 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPCADGR*EETDQQ
Trigger: CTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGCGACTAGACCTAAGTaGGTGAGTGGGACCCCAGCA +
Preference number: 2 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILATRPK*VSGTPA
Trigger: TGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGAACCCCAAGTGCACCTaGCACCTTCCAGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWNPKCT*HLPAVP
Trigger: GGGGACAGCTGGAAGGTGCCAGGTGCACTTGGGGTT...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCATGAACACTCCTGCTaGTGGCCTCCATGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACHEHSC*WPPWLG
Trigger: TCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCGTCCATCAGGCCCCCTaGAATACACCACAGATCCTA +
Preference number: 2 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVVHQAP*NTPQIL
Trigger: TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGAC...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGAC +
Preference number: 2 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLSKHLR*PLRTGD
Trigger: GTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGAC +
Preference number: 2 (lower is better)
Translates to: SCHSPCLPTLADKALHWESKHLR*PLRTGD
Trigger: GTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGAGGGCTGGGGGAGTTTaGGAACGTTTCTGCCAACCT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGRAGGV*ERFCQP
Trigger: AGGTTGGCAGAAACGTTCCCAAACTCCCCCAGCCCT...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGAGGTGGCTTGGGACGTaGCTTTTGTGCTCACACAAA +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPRWLGT*LLCSHK
Trigger: TTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCCTCCCACTGAGGTCTTaGGAAGGTAATGGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTLPLRS*EGNGES
Trigger: GCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAG...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGCTGGTGCTCCCACTaGGGTCTTGAGAAGGTAATG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRGWCSH*GLEKVM
Trigger: CATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGTATCCTCCGTTGTTCTaGTCTGCAGAGCCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWYPPLF*SAEPAP
Trigger: GGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATA...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTCCTATTTCTTAAAGTaGAACGAGCCCCAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPSYFLK*NEPQGL
Trigger: CAGCCCTTGGGGCTCGTTGCACTTTAAGAAATAGGA...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGCTGTACCCTTACCTTaGGGGTGTGTGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAAVPLP*GCVQME
Trigger: TTCCATCTGCACACACCCCCAAGGTAAGGGTACAGC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTT +
Preference number: 2 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRGGLHG*DETIPL
Trigger: AAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACC...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGAAGGCTGGGCTAGGGTaGTGGTGGATGATATGCAGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRKAGLG*WWMICR
Trigger: CCTGCATATCATCCACCACCACCCTAGCCCAGCCTT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGCACAGAAAACACGCCTaGACCCTGGGTTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRHRKHA*TLGLFS
Trigger: GGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTG...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTGTTCAAGGCCAAATaGCACCCCGTCAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILLFKAK*HPVRER
Trigger: CCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAACTGGAGCCATTGCCTaGCTAGTTCAGTCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGTGAIA*LVQSSN
Trigger: ATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGT...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGACTGGAGCCATTGCCTaGCTAGTTCAGTCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRETGAIA*LVQSSN
Trigger: ATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGT...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCATCCTGGTTTTGCTaGCACAAAGACGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACASWFC*HKDEGQ
Trigger: CTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGC...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTCCTATTTCTTAAAGTaGAACGAGCCCCAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFSYFLK*NEPQGL
Trigger: CAGCCCTTGGGGCTCGTTGCACTTTAAGAAATAGGA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGTTTGGGAACGTTTCTaGCAACCTCAGCTAAAACGA +
Preference number: 2 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPVWERF*QPQLKR
Trigger: TCGTTTTAGCTGAGGTTGGCAGAAACGTTCCCAAAC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGAAAGACGGGGACAATaGAGAGTAAATGTGTGCCGT +
Preference number: 2 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFERRGQ*RVNVCR
Trigger: ACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTGTCCCCAGTGGACTTaGTTTTGTTCAAGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLCPQWT*FCSRPN
Trigger: ATTTGGCCTTGAACAAAACCAAGTCCACTGGGGACA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTATGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAG +
Preference number: 2 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLCADGR*EETDQQ
Trigger: CTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACA...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: WWWMICRHSASGSAKTRKEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGTCCATCAGGCCCCCTaGAATACACCACAGATCCTA +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPVHQAP*NTPQIL
Trigger: TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGAC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTATCCTGGGGAAGTCACTaGCCGCACATACATCTGTGG +
Preference number: 2 (lower is better)
Translates to: PRCPLVPQPGAADERLKLSWGSH*PHIHLW
Trigger: CCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGA...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATCCTGGGGAAGTCACTaGCCGCACATACATCTGTGG +
Preference number: 2 (lower is better)
Translates to: PCSSPNARRWERRGQCRVSWGSH*PHIHLW
Trigger: CCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 2 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCCTCCATGGCTGGGATaGAACGATTCCACTTCAACA +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACPPWLG*NDSTST
Trigger: TGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAACTGGAGCCATTGCCTaGCTAGTTCAGTCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLTGAIA*LVQSSN
Trigger: ATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGT...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTACAGCTCCAGGCATCCTaGTTTTGCTGCCACAAAGAC +
Preference number: 2 (lower is better)
Translates to: PRCPLVPQPGAADERLKLQLQAS*FCCHKD
Trigger: GTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTG...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACAGGCACAGCGCCTCTaGGTCAGCGAAGACCAGGAA +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATQAQRL*VSEDQE
Trigger: TTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTG...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACTTTTCCTGGGGCAGTaGGAAGGCTGGGCTAGGGTG +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATLFLGQ*EGWARV
Trigger: CACCCTAGCCCAGCCTTCCCACTGCCCCAGGAAAAG...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CAA 90 bp GTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTGGCCATaGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCG +
Preference number: 2 (lower is better)
Translates to: VKLARLGVSKHLRWP*RTGDSEPAVPRGSS
Trigger: CGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 90 bp GAAGTCACTGGCCGCACATACATCTGTGGAATCGGGCCAGGTGGCTaGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: EVTGRTYICGIGPGG*GRGFCAHTKEVAVL
Trigger: TAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCCAGTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGAAGACAGACACATCCTaGAGAAGAATCTGGGTCGCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRKTDTS*RRIWVA
Trigger: TGCGACCCAGATTCTTCTGCAGGATGTGTCTGTCTT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ACCCTGGGTTTGTTCTCCGATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGCAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 2 (lower is better)
Translates to: TLGLFSDLCSSKGGKTCKQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...CTTGCAAGTTTTACCGCCTTTTGAGGAACACAAATCGGAGAACAAACCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGAC +
Preference number: 2 (lower is better)
Translates to: PCSSPNARRWERRGQCRVSKHLR*PLRTGD
Trigger: GTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 90 bp CACATACATCTGTGGAATCGGGCCAGGTGGCTTGGGACGTGGCTTTaGTGCTCACACAAAAGAGGTGGCAGTGTTAGCTCAAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HIHLWNRARWLGTWL*CSHKRGGSVSSSSE
Trigger: CTCACTGCTTGAGCTAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp AGTCCCACACTCTCTGGGTCCAGGCACAAAGCTATCCTCCGTTGTTCTGATCTGTTGTTCAAGGCCAAATaGCACCCCGTCAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: SPTLSGSRHKAILRCSDLLFKAK*HPVRER
Trigger: CCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAA...CAGATCAGAACAACGGAGGATAGCTTTGTGCCTGGACCCAGAGAGTGTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGCCCACCCCACGCACATaGTCAATTAGTGTTTCTATC +
Preference number: 2 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWPTPRT*SISVSI
Trigger: GATAGAAACACTAATTGAGCATGTGCGTGGGGTGGG...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGTTTGGGAACGTTTCTaGCAACCTCAGCTAAAACGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPVWERF*QPQLKR
Trigger: TCGTTTTAGCTGAGGTTGGCAGAAACGTTCCCAAAC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCATGTCCCCAGTGGACTTaGTTTTGTTCAAGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPCPQWT*FCSRPN
Trigger: ATTTGGCCTTGAACAAAACCAAGTCCACTGGGGACA...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAGTGGCTTCCTGTGCATaGGGGCTCCCTTTGGACATA +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATVASCA*GLPLDI
Trigger: TATGTCCAAAGGGAGCCCCCATGCACAGGAAGCCAC...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACATTGTTCAAGGCCAAATaGCACCCCGTCAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATLFKAK*HPVRER
Trigger: CCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAA...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGTTTGGGAACGTTTCTaGCAACCTCAGCTAAAACGA +
Preference number: 2 (lower is better)
Translates to: PCSSPNARRWERRGQCRVVWERF*QPQLKR
Trigger: TCGTTTTAGCTGAGGTTGGCAGAAACGTTCCCAAAC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 2 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHTEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp TCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTGGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: SSKGGKTCKVRCFQAPSLVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...CAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACCATGAACACTCCTGCTaGTGGCCTCCATGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHHEHSC*WPPWLG
Trigger: TCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATG...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CAA 90 bp GTGACTCTTGATGACAAGTCACTGCAGCTGGCCTGCTGTGAAGTTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: VTLDDKSLQLACCEV*CVCVCVCVCVRVQN
Trigger: ATTCTGGACACGCACACACACACACACACACACACACACACACAAAACTTCACAGCAGGCCAGCTGCAGTGACTTGTCATCAAGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHSYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR TCA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACTTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGTGCCTCTGTCCCCAGTaGACTTGGTTTTGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKCLCPQ*TWFCSR
Trigger: CCTTGAACAAAACCAAGTCCACTGGGGACAGAGGCA...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHSRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR GCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAAAAGGCGGTAAAACTTaGAAGGTTAGGTGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATKGGKT*KVRCFQ
Trigger: TTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTT...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CCA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACTGCCTCTGTCCCCAGTaGACTTGGTTTTGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHCLCPQ*TWFCSR
Trigger: CCTTGAACAAAACCAAGTCCACTGGGGACAGAGGCA...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp AGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGC +
Preference number: 3 (lower is better)
Translates to: SALSRYLVVAEP*PTRSQGGRQPG
Trigger: GCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCAGCCGATGGTACCATaGGCTGGTGCTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPQPMVP*AGAPTE
Trigger: CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp TGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTaGAGGCCGGCCTGCCACGACTGGCCATGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: CPFGLHASLTGR*RPACHDWPCPS
Trigger: TGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp CACACGGTGTCTGCGCTCTCGCTGGGCAGGGGTGGCTaGCCCACGTCCCCATTCTGGACAAGCCAACGCCCT +
Preference number: 3 (lower is better)
Translates to: HTVSALSLGRGG*PTSPFWTSQRP
Trigger: AGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACCCCTGCCCAGCGAGAGCGCAGACACCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp TCCTCCCCGGCAAAGGCCAGGGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGGGAGGCACCCGGAGGC +
Preference number: 3 (lower is better)
Translates to: SSPAKARALSRP*ALYKQREAPGG
Trigger: GCCTCCGGGTGCCTCCCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGCCCTGGCCTTTGCCGGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp TCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGGCCTGCCACGACTGGC +
Preference number: 3 (lower is better)
Translates to: SHASAHLGCTLP*PDAEGRPATTG
Trigger: GCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp GGACGCTCCTCTGTGGCTCCCATGCAAGTGCCCATTTaGGCTGCACGCTTCCCTGACCGGACGCTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: GRSSVAPMQVPI*AARFPDRTLKA
Trigger: GGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCACAGAGGAGCGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp GCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATaGCCCTTCGAGGGCACCAGCAGACCGCCATTCCTT +
Preference number: 3 (lower is better)
Translates to: AQRLWVSEDQEG*PFEGTSRPPFL
Trigger: AAGGAATGGCGGTCTGCTGGTGCCCTCGAAGGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 72 bp AGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCCCAGGGCACCACCATG +
Preference number: 3 (lower is better)
Translates to: SSSSEGDWAAFA*VHTGTAQGTTM
Trigger: CATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTCAGGGCTGGGGGAGTTaGGGAACGTTTCTGCCAACC +
Preference number: 3 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPQGWGS*GTFLPT
Trigger: GGTTGGCAGAAACGTTCCCAAACTCCCCCAGCCCTG...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTCAGGGCTGGGGGAGTTaGGGAACGTTTCTGCCAACC +
Preference number: 3 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAQGWGS*GTFLPT
Trigger: GGTTGGCAGAAACGTTCCCAAACTCCCCCAGCCCTG...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACAGCCGATGGTACCATaGGCTGGTGCTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGQPMVP*AGAPTE
Trigger: CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGCCACGCCACCCAGCCTaGGGTCTTCCCTCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRPRHPA*GLPSSA
Trigger: GGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGG...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp TCTGTACAAGCAGAGGGAGGCACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGTGGTCCAGGGAACAGA +
Preference number: 3 (lower is better)
Translates to: SVQAEGGTRRLV*AATWGGGPGNR
Trigger: TCTGTTCCCTGGACCACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTCCCTCTGCTTGTACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp GCCCTCAGGCCACAGCTCCAGGCATCCTGGTTTTGCTaGCACAAAGACGAGGGTCAGCTCCACCTGTGTGCC +
Preference number: 3 (lower is better)
Translates to: ALRPQLQASWFC*HKDEGQLHLCA
Trigger: GGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTGGCCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp TCCTCACCACCCCCTCCACACTCCTGGGGAAGTCACTaGCCGCACATACATCTGTGGAATCGGGCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: SSPPPPHSWGSH*PHIHLWNRARW
Trigger: CCACCTGGCCCGATTCCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGAGTGTGGAGGGGGTGGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTaGCTTGACCCAGGCCTCCTTTCCCTAAGAGCAGCA +
Preference number: 3 (lower is better)
Translates to: PGGLRGSLPRGC*LDPGLLSLRAA
Trigger: TGCTGCTCTTAGGGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCCCAGGCATCCTGGTTTaGCTGCCACAAAGACGAGGG +
Preference number: 3 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFPGILV*LPQRRG
Trigger: CCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGG...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTACCCTGCCTGCCCACCTaGGCTGACAAGGCGCTGCAT +
Preference number: 3 (lower is better)
Translates to: PCSSPNARRWERRGQCRVPCLPT*ADKALH
Trigger: ATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGG...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp CCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTaGGAGCTGCATGCGAGTCCCATGAGCACCCTCTGT +
Preference number: 3 (lower is better)
Translates to: PFWTSQRPPTQC*ELHASPMSTLC
Trigger: ACAGAGGGTGCTCATGGGACTCGCATGCAGCTCTCAGCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp CCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGAGACAGACCAACAGGA +
Preference number: 3 (lower is better)
Translates to: PPAGLYPYLGGV*RWKVGRDRPTG
Trigger: TCCTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp ATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATaGTGGCTTGACCCAGGCCTCCTTTCCCTAAGAGCA +
Preference number: 3 (lower is better)
Translates to: MPGGLRGSLPRG*WLDPGLLSLRA
Trigger: TGCTCTTAGGGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CGTGGGGTGGTGGTCCAGGGAACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGTTCAGTCCTCAAATGG +
Preference number: 3 (lower is better)
Translates to: RGVVVQGTEGGH*SHCLPSSVLKW
Trigger: CCATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGTTCCCTGGACCACCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp AGGGTGGTGGTGGATGATATGCAGGCACAGCGCCTCTaGGTCAGCGAAGACCAGGAAGGATGCCCCTTCGAG +
Preference number: 3 (lower is better)
Translates to: RVVVDDMQAQRL*VSEDQEGCPFE
Trigger: CTCGAAGGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CCA 72 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCC +
Preference number: 3 (lower is better)
Translates to: RGGSVSSSSEGD*AAFACVHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp AGCATGGTCCCAACAATCCCCAGGGACGCTCCTCTGTaGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCT +
Preference number: 3 (lower is better)
Translates to: SMVPTIPRDAPL*LPCKCPFGLHA
Trigger: AGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCACAGAGGAGCGTCCCTGGGGATTGTTGGGACCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGCACAGAGTGGAATCTaGAGGTCTGTAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPAQSGI*RSVVFF
Trigger: AAAGAAAACTACAGACCTCAAGATTCCACTCTGTGC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAATCGGGCCAGGTGGCTaGGGACGTGGCTTTTGTGCT +
Preference number: 3 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPIGPGG*GRGFCA
Trigger: AGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGAT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp ATTCCTTCAAAGTGCCCCACCTCGCCCACATCCCCATaGACACTCCTGCTGGTGGCCTCCATGGCTGGGATG +
Preference number: 3 (lower is better)
Translates to: IPSKCPTSPTSP*TLLLVASMAGM
Trigger: CATCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGAGGTGGGGCACTTTGAAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 72 bp ACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTaGATTGGGAGTGCCCCAGACCTAGTTTCAGGTACT +
Preference number: 3 (lower is better)
Translates to: TVPACPPWLTRR*IGSAPDLVSGT
Trigger: AGTACCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp TCTTCAGCCGTCAGAGCCAGGATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCCCTCACACGGTGTCTG +
Preference number: 3 (lower is better)
Translates to: SSAVRARISLWL*TKGCCPLTRCL
Trigger: CAGACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGCTCTGACGGCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CAGAGGTGGCCAGGAGAAGAGCTTTTCCTGGGGCAGTaGGAAGGCTGGGCTAGGGTGGTGGTGGATGATATG +
Preference number: 3 (lower is better)
Translates to: QRWPGEELFLGQ*EGWARVVVDDM
Trigger: CATATCATCCACCACCACCCTAGCCCAGCCTTCCCACTGCCCCAGGAAAAGCTCTTCTCCTGGCCACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CCA 72 bp CACTCCTGGGGAAGTCACTGGCCGCACATACATCTGTaGAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTG +
Preference number: 3 (lower is better)
Translates to: HSWGSHWPHIHL*NRARWLGTWLL
Trigger: CAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTaGGAGTGCCCCAGACCTAGTTTCAGGTACTTCTGT +
Preference number: 3 (lower is better)
Translates to: PCLPTLADKALH*ECPRPSFRYFC
Trigger: ACAGAAGTACCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTaGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTG +
Preference number: 3 (lower is better)
Translates to: VCVCVCVRVQNA*WPAGVFTKGML
Trigger: CAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCCAGTGGACTTGGTTTaGTTCAAGGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEPVDLV*FKAKCH
Trigger: GTGGCATTTGGCCTTGAACAAAACCAAGTCCACTGG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCTGTCCCCAGTGGACTaGGTTTTGTTCAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTELSPVD*VLFKAK
Trigger: TTTGGCCTTGAACAAAACCAAGTCCACTGGGGACAG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACCAGGCATCCTGGTTTaGCTGCCACAAAGACGAGGG +
Preference number: 3 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPPGILV*LPQRRG
Trigger: CCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTCTAGTGTTCCTTTGTTaGCCAGGGAATGTTTCGGGA +
Preference number: 3 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHALVFLC*PGNVSG
Trigger: TCCCGAAACATTCCCTGGCAAACAAAGGAACACTAG...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTACCAGGCATCCTGGTTTaGCTGCCACAAAGACGAGGG +
Preference number: 3 (lower is better)
Translates to: PRCPLVPQPGAADERLKLPGILV*LPQRRG
Trigger: CCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGG...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGGTTTGTTCTCCGATTaGTGTTCCTCAAAAGGCGGT +
Preference number: 3 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRGLFSD*CSSKGG
Trigger: ACCGCCTTTTGAGGAACACAAATCGGAGAACAAACC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCGGTTTGTTCTCCGATTaGTGTTCCTCAAAAGGCGGT +
Preference number: 3 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSGLFSD*CSSKGG
Trigger: ACCGCCTTTTGAGGAACACAAATCGGAGAACAAACC...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp AGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTaGGGTCTTGAGAAGGTAATGGGGAGAGCCACTTGC +
Preference number: 3 (lower is better)
Translates to: SPADGTIGWCSH*GLEKVMGRATC
Trigger: GCAAGTGGCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp GGTCCAGGCACAAAGCTATCCTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGCAGGTACCTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: GPGTKLSSVVLI*RASALSRYLVV
Trigger: CACCACTAGGTACCTGCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATAGCTTTGTGCCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp CACCCTCTGTCCACCGTGACAAAGACAGACACATCCTaGAGAAGAATCTGGGTCGCAGCAGGTGCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: HPLSTVTKTDTS*RRIWVAAGALP
Trigger: AGGCAGGGCACCTGCTGCGACCCAGATTCTTCTGCAGGATGTGTCTGTCTTTGTCACGGTGGACAGAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATaGCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCACPE*LVACGGLYQGD
Trigger: ATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp TTCCTTTGTTTGCCAGGGAATGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATGAAGCGGGGAGTCCCA +
Preference number: 3 (lower is better)
Translates to: FLCLPGNVSGRL*SGTVGMKRGVP
Trigger: TGGGACTCCCCGCTTCATCCCCACCGTCCCACTCCACAGCCTTCCCGAAACATTCCCTGGCAAACAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCTGTCCCCAGTGGACTaGGTTTTGTTCAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPALSPVD*VLFKAK
Trigger: TTTGGCCTTGAACAAAACCAAGTCCACTGGGGACAG...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCTAGTGTTCCTTTGTTaGCCAGGGAATGTTTCGGGA +
Preference number: 3 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVLVFLC*PGNVSG
Trigger: TCCCGAAACATTCCCTGGCAAACAAAGGAACACTAG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATTCCAAGCACCTTCGTaGGCCATTGAGAACTGGAGA +
Preference number: 3 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRFQAPS*AIENWR
Trigger: TCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGAA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp GAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGGGGAAACAAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: EMSSSPSARSSR*EAEVSGGNKRN
Trigger: GTTCCTCTTGTTTCCCCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp GCCGCACATACATCTGTGGAATCGGGCCAGGTGGCTTaGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AAHTSVESGQVA*DVAFVLTQKRW
Trigger: CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTTCTCCTAGTGTTCCTTaGTTTGCCAGGGAATGTTTC +
Preference number: 3 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPSPSVP*FARECF
Trigger: GAAACATTCCCTGGCAAACAAAGGAACACTAGGAGA...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp TGGAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGCAGTGTTAGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: WNRARWLGTWLL*SHKRGGSVSSS
Trigger: GCTTGAGCTAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp TCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATaGAGAGTAAATGTGTGCCGTGACACCCAGTATGCG +
Preference number: 3 (lower is better)
Translates to: SPNARRWERRGQ*RVNVCRDTQYA
Trigger: CGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CACTGGCCGCACATACATCTGTGGAATCGGGCCAGGTaGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGA +
Preference number: 3 (lower is better)
Translates to: HWPHIHLWNRAR*LGTWLLCSHKR
Trigger: TCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp CATGAACACTCCTGCTGGTGGCCTCCATGGCTGGGATaGAACGATTCCACTTCAACACCCAACACACCAACC +
Preference number: 3 (lower is better)
Translates to: HEHSCWWPPWLG*NDSTSTPNTPT
Trigger: GGTTGGTGTGTTGGGTGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR GCA 72 bp CTGAGAGCTGCATGCGAGTCCCATGAGCACCCTCTGTaGACACACCTTCCAGAACTTAGAGCCCCAACAAAA +
Preference number: 3 (lower is better)
Translates to: LRAACESHEHPL*THLPELRAPTK
Trigger: TTTTGTTGGGGCTCTAAGTTCTGGAAGGTGTGTGCACAGAGGGTGCTCATGGGACTCGCATGCAGCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp ATCCCCATGAACACTCCTGCTGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTTCAACACCCAACACAC +
Preference number: 3 (lower is better)
Translates to: IPMNTPAGGLHG*DETIPLQHPTH
Trigger: GTGTGTTGGGTGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
3UTR CCA 72 bp AAGCTCTCTCCCTGTTCCTCCCCAAACGCTAGGCGATaGGAAAGACGGGGACAATGCAGAGTAAATGTGTGC +
Preference number: 3 (lower is better)
Translates to: KLSPCSSPNARR*ERRGQCRVNVC
Trigger: GCACACATTTACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGGAGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGCCAGTGGACTTGGTTTaGTTCAAGGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGPVDLV*FKAKCH
Trigger: GTGGCATTTGGCCTTGAACAAAACCAAGTCCACTGG...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACCAGCCGATGGTACCATaGGCTGGTGCTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHQPMVP*AGAPTE
Trigger: CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTG...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTaGAATACACCACAGATCCTATTTCTTAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: LQTPGKGVHQAP*NTPQILFLKVQ
Trigger: TTGCACTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp ATACATCTGTGGAATCGGGCCAGGTGGCTTGGGACGTaGCTTTTGTGCTCACACAAAAGAGGTGGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: IHLWNRARWLGT*LLCSHKRGGSV
Trigger: AACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGTCTCCTAGTGTTCCTTaGTTTGCCAGGGAATGTTTC +
Preference number: 3 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWSPSVP*FARECF
Trigger: GAAACATTCCCTGGCAAACAAAGGAACACTAGGAGA...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp CGATGGGAAAGACGGGGACAATGCAGAGTAAATGTGTaGCGTGACACCCAGTATGCGACACAAGCCAAGAAT +
Preference number: 3 (lower is better)
Translates to: RWERRGQCRVNV*RDTQYATQAKN
Trigger: ATTCTTGGCTTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTCCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp AAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTC +
Preference number: 3 (lower is better)
Translates to: KLARLGVSKHLR*PLRTGDSEPAV
Trigger: GACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGCCAGTGGACTTGGTTTaGTTCAAGGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKPVDLV*FKAKCH
Trigger: GTGGCATTTGGCCTTGAACAAAACCAAGTCCACTGG...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAGCACAGAGTGGAATCTaGAGGTCTGTAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATAQSGI*RSVVFF
Trigger: AAAGAAAACTACAGACCTCAAGATTCCACTCTGTGC...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR GCA 72 bp TTCTCCGATTTGTGTTCCTCAAAAGGCGGTAAAACTTaGAAGGTTAGGTGTTTCCAAGCACCTTCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: FSDLCSSKGGKT*KVRCFQAPSLA
Trigger: GGCCAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAATCGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CATCATCCAACATTCACAGAAAACACGCCTGAACCCTaGGTTTGTTCTCCGATTTGTGTTCCTCAAAAGGCG +
Preference number: 3 (lower is better)
Translates to: HHPTFTENTPEP*VCSPICVPQKA
Trigger: CGCCTTTTGAGGAACACAAATCGGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTGAATGTTGGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACGCACAGAGTGGAATCTaGAGGTCTGTAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHAQSGI*RSVVFF
Trigger: AAAGAAAACTACAGACCTCAAGATTCCACTCTGTGC...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR-3UTR CAA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACTCTCCTAGTGTTCCTTaGTTTGCCAGGGAATGTTTC +
Preference number: 3 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHSPSVP*FARECF
Trigger: GAAACATTCCCTGGCAAACAAAGGAACACTAGGAGA...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR TCA 72 bp AAAAATTCATCATCCAACATTCACAGAAAACACGCCTaGACCCTGGGTTTGTTCTCCGATTTGTGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: KNSSSNIHRKHA*TLGLFSDLCSS
Trigger: TGAGGAACACAAATCGGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTGAATGTTGGATGATGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CCA 72 bp CATACAGGTCTTCACTTTTGCTGCGAAACAGAATTTTaGGCACACAGCCAGACTACTAACACATTTCAATAC +
Preference number: 3 (lower is better)
Translates to: HTGLHFCCETEF*AHSQTTNTFQY
Trigger: GTATTGAAATGTGTTAGTAGTCTGGCTGTGTGCCCAAAATTCTGTTTCGCAGCAAAAGTGAAGACCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCTCCCTGACCGGACGCTaGAGGCCGGCCTGCCACGAC +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGSLTGR*RPACHD
Trigger: GTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGA...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCGCTLP*PDAEGR
Trigger: CCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCC...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTGCAGCAGGAGCTGAGTaGGGCACAGGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSAAGAE*GTGMPP
Trigger: TGGGGGCATCCCTGTGCCTCACTCAGCTCCTGCTGC...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCCCTCACACGGTGTCTaGGCTCTCGCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLPSHGV*ALAGQG
Trigger: CCCCTGCCCAGCGAGAGCGCAGACACCGTGTGAGGG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCAGTGAGGCACAGGGATaGCCCCATCCCCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPSEAQG*PHPLLA
Trigger: GGCCAGAAGGGGATGGGGGCATCCCTGTGCCTCACT...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCCCGGATCCCTGCGCTaGCCTCGGGAAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLPGSLR*PRESSD
Trigger: GTCGCTGCTTTCCCGAGGGCAGCGCAGGGATCCGGG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCAAGGGCTGTCTGGCATaGGGCCCTCTGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAKGCLA*GPLHPT
Trigger: AGTGGGGTGCAGAGGGCCCCATGCCAGACAGCCCTT...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCACGTCCCCATTCTaGACAAGCCAACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAPTSPF*TSQRPP
Trigger: GGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGG...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCACGCCACCCAGCCTTaGGTCTTCCCTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAHATQP*VFPLQP
Trigger: CGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTCAGCTCCACCTGTGTaGCTCCCTCCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCSAPPV*LPPSRQ
Trigger: CTGCCGGGAGGGAGGGAGGCACACAGGTGGAGCTGA...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCCCCATGAACACTCCTaGTGGTGGCCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPPHEHS*WWPPWL
Trigger: CAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCGCCACAGCCCAGCCATaGAAGTTTGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAATAQP*KFEVLG
Trigger: CCCCAGCACCTCAAACTTGCATGGCTGGGCTGTGGC...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCGCATTGGCCACGCTaGACCGACCGCACCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQAHWPR*TDRTAA
Trigger: GGCCGCGGTGCGGTCGGTGCAGCGTGGCCAATGCGC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCTGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCGCAAAACCAAGGCGGTaGAGGCAGGAGAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGAKPRR*RQESTE
Trigger: CTCCGTGCTCTCCTGCCTCCACCGCCTTGGTTTTGC...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTTGTGGGGGCGACGGCTaGCTTGTGACAGGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLCGGDG*LVTGVE
Trigger: TTCCACGCCTGTCACAAGTCAGCCGTCGCCCCCACA...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLKPAQV*SARPRV
Trigger: TACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTT...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCACGGGCAGGGCAGCTaGAGACGCCCGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSHGQGS*RRPGKV
Trigger: CACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCCCGTCTCCAACCACTaGAGGCGGGCACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPPVSNH*RRARAG
Trigger: CCCTGCCCGTGCCCGCCTGCAGTGGTTGGAGACGGG...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCCCGTCTCCAACCACTaGAGGCGGGCACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVPVSNH*RRARAG
Trigger: CCCTGCCCGTGCCCGCCTGCAGTGGTTGGAGACGGG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCC +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSWAAFA*VHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCCTTTGGACATAAGCTaGCACAGTCCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQAPLDIS*HSPCLP
Trigger: GGGCAGGCAGGGACTGTGGCAGCTTATGTCCAAAGG...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGCTGGGCAGGGGTGGCTaGCCCACGTCCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWELGRGG*PTSPFW
Trigger: CCAGAATGGGGACGTGGGGCAGCCACCCCTGCCCAG...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCTGGGCAGGGGTGGCTaGCCCACGTCCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRLGRGG*PTSPFW
Trigger: CCAGAATGGGGACGTGGGGCAGCCACCCCTGCCCAG...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGCTGGGCAGGGGTGGCTaGCCCACGTCCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLLGRGG*PTSPFW
Trigger: CCAGAATGGGGACGTGGGGCAGCCACCCCTGCCCAG...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCTGTCGCCCCAGGTCTTaGTGGCTCACAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGCRPRS*WLTACV
Trigger: AACACACGCTGTGAGCCACCAAGACCTGGGGCGACA...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSSYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGALSRP*ALYKQR
Trigger: CCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGC...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPALSRP*ALYKQR
Trigger: CCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCGCAAGTTTGAGGTGCTaGGGGGCAGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCASLRC*GAEVAR
Trigger: CCTGGCCACCTCTGCCCCCCAGCACCTCAAACTTGC...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGCCCCAAGGGCTGTCTaGCATGGGGCCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPAPRAV*HGALCT
Trigger: GGTGCAGAGGGCCCCATGCCAGACAGCCCTTGGGGC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCGGCGGGGTCAGTAAATaGGGCCGTTTCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGGGVSK*GRFLIC
Trigger: GCAGATGAGGAAACGGCCCCATTTACTGACCCCGCC...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTGTCTGCGCTCTCGCTaGGCAGGGGTGGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSCLRSR*AGVAAP
Trigger: TGGGGCAGCCACCCCTGCCCAGCGAGAGCGCAGACA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCACGCCACCCAGCCTTaGGTCTTCCCTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLHATQP*VFPLQP
Trigger: CGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCTCCCACTGAGGTCTTaGGAAGGTAATGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQALPLRS*EGNGES
Trigger: GCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAG...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTETRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCCCACCCCCAATTACGTaGGGAGCTGACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCPPPIT*GADQVS
Trigger: GCTCACCTGGTCAGCTCCTCACGTAATTGGGGGTGG...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCTCCTGGGCCACTTTCTaGCCTGGACACAGACGATGT +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQASWATF*PGHRRC
Trigger: ACATCGTCTGTGTCCAGGTCAGAAAGTGGCCCAGGA...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCAGAACCATTCCCGCTaGCGTTGGACTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPQNHSR*RWTGLC
Trigger: ACAAAGCCCAGTCCAACGGCAGCGGGAATGGTTCTG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTGGCATGGGGCCCTCTaGACCCCACTAGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSWHGAL*TPLALA
Trigger: GGCGAGAGCTAGTGGGGTGCAGAGGGCCCCATGCCA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGGGCCGTTTCCTCATCTaGTGGGGTCCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEGRFLI*WGPGLG
Trigger: CCCCAGCCCTGGACCCCAGCAGATGAGGAAACGGCC...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTGGCCGTTTCCTCATCTaGTGGGGTCCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPGRFLI*WGPGLG
Trigger: CCCCAGCCCTGGACCCCAGCAGATGAGGAAACGGCC...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTGGCTGACAAGGCGCTaGATTGGGAGTGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCWLTRR*IGSAPD
Trigger: GTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCA...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCCCCTGTGGCTTCCTGTaGATGGGGGCTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCPCGFL*MGAPFG
Trigger: TCCAAAGGGAGCCCCCATGCACAGGAAGCCACAGGG...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACCCTCACACGGTGTCTaGGCTCTCGCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGPSHGV*ALAGQG
Trigger: CCCCTGCCCAGCGAGAGCGCAGACACCGTGTGAGGG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCTCTTTACCAAGGGGATaGTGGCTTGACCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPSLPRG*WLDPGL
Trigger: GAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGA...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACCCGGATCCCTGCGCTaGCCTCGGGAAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGPGSLR*PRESSD
Trigger: GTCGCTGCTTTCCCGAGGGCAGCGCAGGGATCCGGG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGGCTTCCCCGGATCCCTaGGCTGCCCTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEASPDP*AALGKA
Trigger: TGCTTTCCCGAGGGCAGCGCAGGGATCCGGGGAAGC...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGTCCTCCACCTCCTCCTaGCGCCGCGCCGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKSSTSS*RRAAAL
Trigger: GAGAGCCGCGGCGCGGCGGCAGGAGGAGGTGGAGGA...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCAGCGTCCACACAAGCTaGGCAGCTGGGGCATGTCTC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCSVHTS*AAGACL
Trigger: GAGACATGCCCCAGCTGCCCAGCTTGTGTGGACGCT...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTTGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGACAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCAGGCACAGCGCCTCTaGGTCAGCGAAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLQAQRL*VSEDQE
Trigger: TTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTGCTGGGCTAGGGTGGTaGTGGATGATATGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSAGLGW*WMICRH
Trigger: GTGCCTGCATATCATCCACCACCACCCTAGCCCAGC...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCAAGGCTGGGCTAGGGTaGTGGTGGATGATATGCAGG +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPKAGLG*WWMICR
Trigger: CCTGCATATCATCCACCACCACCCTAGCCCAGCCTT...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCTTTTCCTGGGGCAGTaGGAAGGCTGGGCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLLFLGQ*EGWARV
Trigger: CACCCTAGCCCAGCCTTCCCACTGCCCCAGGAAAAG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGCCCCAAGGGCTGTCTaGCATGGGGCCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPAPRAV*HGALCT
Trigger: GGTGCAGAGGGCCCCATGCCAGACAGCCCTTGGGGC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTTCGGGCCAGGTGGCTTaGGACGTGGCTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLSGQVA*DVAFVL
Trigger: GAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGA...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCCGGCCTGCCACGACTaGCCATGCCCCTCAAACGAC +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPPACHD*PCPSND
Trigger: GTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCGATATGCTCATGCTTaGGGCGGTGGATGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQARYAHA*GGGCAV
Trigger: TACAGCACATCCACCGCCTCAAGCATGAGCATATCG...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGG +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPSMLSM*LVASHG
Trigger: CCCATGGGATGCCACCAGTCACATTGACAACATGGA...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTAGCGTGTGTTCGGCTTaGAGCTGGGAGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLSVCSA*SWEGSS
Trigger: ACTGCTTCCCTCCCAGCTTCAAGCCGAACACACGCT...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCTAGACCTAAGTGGGTaGGTGGGACCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRLDLSG*VGPQQA
Trigger: GGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAG...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCCTGCCCACCTTGGCTaGCAAGGCGCTGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSPAHLG*QGAALG
Trigger: TCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRARSSR*EAEVSG
Trigger: CCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCAGCAGTGGCCGAGGTaGCAGACCGCCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVQQWPR*QTASCS
Trigger: AGAGCAGGAGGCGGTCTGTCACCTCGGCCACTGCTG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCACCGCCCCAGCCGGGTaGATCTCGTCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSTAPAG*ISSCTA
Trigger: TGCTGTACAGGACGAGATGCACCCGGCTGGGGCGGT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGACCGCCCCAGCCGGGTaGATCTCGTCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWETAPAG*ISSCTA
Trigger: TGCTGTACAGGACGAGATGCACCCGGCTGGGGCGGT...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEKPAQV*SARPRV
Trigger: TACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTT...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTTGGCATGGGGCCCTCTaGACCCCACTAGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPWHGAL*TPLALA
Trigger: GGCGAGAGCTAGTGGGGTGCAGAGGGCCCCATGCCA...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACACGGGCAGGGCAGCTaGAGACGCCCGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLHGQGS*RRPGKV
Trigger: CACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGCCCGTCTCCAACCACTaGAGGCGGGCACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKPVSNH*RRARAG
Trigger: CCCTGCCCGTGCCCGCCTGCAGTGGTTGGAGACGGG...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTGGTAGAGAGCCCAGGTaGTCCTCCTCACCACCCCCT +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAGREPR*SSSPPP
Trigger: AGGGGGTGGTGAGGAGGAGCACCTGGGCTCTCTACC...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCTGGGTCGCAGCAGGTaGCCTGCCTCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVLGRSR*PASSRK
Trigger: CTTCCTGCTGGAGGCAGGGCACCTGCTGCGACCCAG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGAGTGAGGCACAGGGATaGCCCCATCCCCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTESEAQG*PHPLLA
Trigger: GGCCAGAAGGGGATGGGGGCATCCCTGTGCCTCACT...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGTGTGTGTGTGTGTGTaGGTGTCCAGAATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPVCVCV*VSRMPG
Trigger: ACCAGGCATTCTGGACACGCACACACACACACACAC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCTTCCCCGGATCCCTaGGCTGCCCTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQASPDP*AALGKA
Trigger: TGCTTTCCCGAGGGCAGCGCAGGGATCCGGGGAAGC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGCTTCCCCGGATCCCTaGGCTGCCCTCGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTASPDP*AALGKA
Trigger: TGCTTTCCCGAGGGCAGCGCAGGGATCCGGGGAAGC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTGGGCCAGAAGCAGATaGAGAGGTTCTCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSWARSR*RGSRWS
Trigger: TGACCAGCGAGAACCTCTCCATCTGCTTCTGGCCCA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGG +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFEAPGG*CEQLRG
Trigger: CCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGAGGCACCCGGAGGCTaGTGTGAGCAGCTACGTGGG +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPEAPGG*CEQLRG
Trigger: CCCACGTAGCTGCTCACACCAGCCTCCGGGTGCCTC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTGCGACTAGACCTAAGTaGGTGAGTGGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLATRPK*VSGTPA
Trigger: TGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGC...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCGGAGTGGGGGCAGCATaGTCCCAACAATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSGVGAA*SQQSPG
Trigger: CCCTGGGGATTGTTGGGACCATGCTGCCCCCACTCC...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTCGCAGCAGCTCTCTTaGTATAGGGCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWESQQLS*YRAAGP
Trigger: CGGCCCTGCAGCCCTATATCAAGAGAGCTGCTGCGA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGCCCAGGTTGCCTTTGTaGTGGATGGCCGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLPRLPL*WMAGVW
Trigger: CCAAACCCCGGCCATCCATCACAAAGGCAACCTGGG...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCCCAGGTTGCCTTTGTaGTGGATGGCCGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEPRLPL*WMAGVW
Trigger: CCAAACCCCGGCCATCCATCACAAAGGCAACCTGGG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCAGACTTGTTCCCGCTaGCCCGGTAGATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPQTCSR*PGRCLP
Trigger: CGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTGTGGGGGCGACGGCTaGCTTGTGACAGGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVCGGDG*LVTGVE
Trigger: TTCCACGCCTGTCACAAGTCAGCCGTCGCCCCCACA...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGTCGCCCACATCCCCATaGACACTCCTGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRESPTSP*TLLLVA
Trigger: GGCCACCAGCAGGAGTGTTCATGGGGATGTGGGCGA...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACCTGCCCACCTTGGCTaGCAAGGCGCTGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGPAHLG*QGAALG
Trigger: TCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCAGCAGTGGCCGAGGTaGCAGACCGCCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPQQWPR*QTASCS
Trigger: AGAGCAGGAGGCGGTCTGTCACCTCGGCCACTGCTG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCACCGCCCCAGCCGGGTaGATCTCGTCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVTAPAG*ISSCTA
Trigger: TGCTGTACAGGACGAGATGCACCCGGCTGGGGCGGT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATCAGCTCCACCTGTGTaGCTCCCTCCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRSAPPV*LPPSRQ
Trigger: CTGCCGGGAGGGAGGGAGGCACACAGGTGGAGCTGA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCCACGGGCAGGGCAGCTaGAGACGCCCGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTHGQGS*RRPGKV
Trigger: CACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTG...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCC +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEWAAFA*VHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGCCTCTGTGGCTCCCATaGAAGTGCCCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGPLWLP*KCPFGL
Trigger: CAGCCCAAATGGGCACTTGCATGGGAGCCACAGAGG...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCCGGATCCCTGCGCTaGCCTCGGGAAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPGSLR*PRESSD
Trigger: GTCGCTGCTTTCCCGAGGGCAGCGCAGGGATCCGGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCTGTCAATGTGACTGGTaGCATCCCATGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGCQCDW*HPMGSL
Trigger: AAGAGACCCCATGGGATGCCACCAGTCACATTGACA...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCAGCGTCCACACAAGCTaGGCAGCTGGGGCATGTCTC +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRSVHTS*AAGACL
Trigger: GAGACATGCCCCAGCTGCCCAGCTTGTGTGGACGCT...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGCCCGCCGGCCCAGCGTaGACTCTCTACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEPAGPA*TLYSSL
Trigger: TAGAGAAGAGTAGAGAGTCCACGCTGGGCCGGCGGG...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTCGTCCTGTACAGCACTaGCTTGCTCACGATGGAAAC +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSRPVQH*LAHDGN
Trigger: GTTTCCATCGTGAGCAAGCCAGTGCTGTACAGGACG...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCGCCCCAGGTCTTGGTaGCTCACAGCGTGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRERPRSW*LTACVR
Trigger: CCGAACACACGCTGTGAGCCACCAAGACCTGGGGCG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSSYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAAACCCCAAGTGCACCTaGCACCTTCCAGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRNPKCT*HLPAVP
Trigger: GGGGACAGCTGGAAGGTGCCAGGTGCACTTGGGGTT...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSGGLHG*DETIPL
Trigger: AAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACC...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCAGGCACAGCGCCTCTaGGTCAGCGAAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEQAQRL*VSEDQE
Trigger: TTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGCAAGTTTGAGGTGCTaGGGGGCAGAGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTASLRC*GAEVAR
Trigger: CCTGGCCACCTCTGCCCCCCAGCACCTCAAACTTGC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGCCACTAGCTCTCGCCTaGGGGGTGCCTAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQPLALA*GVPSVR
Trigger: CCTGACACTAGGCACCCCCCAGGCGAGAGCTAGTGG...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCGCCCCAAGGGCTGTCTaGCATGGGGCCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTAPRAV*HGALCT
Trigger: GGTGCAGAGGGCCCCATGCCAGACAGCCCTTGGGGC...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTCGGGCCAGGTGGCTTaGGACGTGGCTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPSGQVA*DVAFVL
Trigger: GAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGA...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCCGGCCTGCCACGACTaGCCATGCCCCTCAAACGAC +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPPACHD*PCPSND
Trigger: GTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAAGGGACGCTCCTCTGTaGCTCCCATGCAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRRDAPL*LPCKCP
Trigger: TGGGCACTTGCATGGGAGCCACAGAGGAGCGTCCCT...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTCTGCGCTCTCGCTaGGCAGGGGTGGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTCLRSR*AGVAAP
Trigger: TGGGGCAGCCACCCCTGCCCAGCGAGAGCGCAGACA...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGCAAAACCAAGGCGGTaGAGGCAGGAGAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRAKPRR*RQESTE
Trigger: CTCCGTGCTCTCCTGCCTCCACCGCCTTGGTTTTGC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCCCCCATCCCCTTCTaGCCAGCGAGCTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQAPIPF*PASCSY
Trigger: ATAGGAGCAGCTCGCTGGCCAGAAGGGGATGGGGGC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTCGTGTCCAGAATGCCTaGTGGCCTGCGGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCRVQNA*WPAGVF
Trigger: AAAGACCCCCGCAGGCCACCAGGCATTCTGGACACG...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGTCGCAGCAGCTCTCTTaGTATAGGGCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQSQQLS*YRAAGP
Trigger: CGGCCCTGCAGCCCTATATCAAGAGAGCTGCTGCGA...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTCGCAGCAGCTCTCTTaGTATAGGGCTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTSQQLS*YRAAGP
Trigger: CGGCCCTGCAGCCCTATATCAAGAGAGCTGCTGCGA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGGGAGATGGACTAAATaGTTATCCCGCCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLGRWTK*LSRRPS
Trigger: GCTGGGCCGGCGGGATAATCATTTAGTCCATCTCCC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCATTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGTATCCTCCGTTGTTCTaGTCTGCAGAGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEYPPLF*SAEPAP
Trigger: GGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATA...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCCACAGAAAACACGCCTaGACCCTGGGTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCHRKHA*TLGLFS
Trigger: GGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTG...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACCACCCCCAATTACGTaGGGAGCTGACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGPPPIT*GADQVS
Trigger: GCTCACCTGGTCAGCTCCTCACGTAATTGGGGGTGG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGGGCTGCACGCTTCCCTaGCCGGACGCTGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGGCTLP*PDAEGR
Trigger: CCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGCAGCC...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCGCAGCAGGAGCTGAGTaGGGCACAGGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTAAGAE*GTGMPP
Trigger: TGGGGGCATCCCTGTGCCTCACTCAGCTCCTGCTGC...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGGGGCGCAGCTGAGGTaGCTCTTGATGACAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLGAQLR*LLMTSH
Trigger: GTGACTTGTCATCAAGAGTCACCTCAGCTGCGCCCC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCGGGGCGCAGCTGAGGTaGCTCTTGATGACAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRGAQLR*LLMTSH
Trigger: GTGACTTGTCATCAAGAGTCACCTCAGCTGCGCCCC...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGAGGGCTGCAGGGCCGTaGTTCGATGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGRAAGP*FDEVEK
Trigger: CTTTTCAACCTCATCGAAGCACGGCCCTGCAGCCCT...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGATGGGCCTCGTATAGCTaGTCTGCAGGGACGGTATCC +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRWASYS*SAGTVS
Trigger: GGATACCGTCCCTGCAGAGCAGCTATACGAGGCCCA...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGTGCGTCCGTAACCAATaGCAGCAGAAGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGCVRNQ*QQKQGR
Trigger: TCGACCCTGCTTCTGCTGGCATTGGTTACGGACGCA...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATCAGCTCCACCTGTGTaGCTCCCTCCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSAPPV*LPPSRQ
Trigger: CTGCCGGGAGGGAGGGAGGCACACAGGTGGAGCTGA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGGCCATTCCTTCAAAGTaGCCCACCTCGCCCACATCC +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEAIPSK*PTSPTS
Trigger: GGATGTGGGCGAGGTGGGGCACTTTGAAGGAATGGC...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCGAAGACCAGGAAGGATaGCCCTTCGAGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVEDQEG*PFEGTS
Trigger: GCTGGTGCCCTCGAAGGGGCATCCTTCCTGGTCTTC...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCATGGCATGGGGCCCTCTaGACCCCACTAGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPWHGAL*TPLALA
Trigger: GGCGAGAGCTAGTGGGGTGCAGAGGGCCCCATGCCA...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGGCCGTTTCCTCATCTaGTGGGGTCCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILGRFLI*WGPGLG
Trigger: CCCCAGCCCTGGACCCCAGCAGATGAGGAAACGGCC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCGGACTGGGCTGCTTTTaGCTGCGTTCACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSGLGCF*LRSHRD
Trigger: GTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCC...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGGACTGGGCTGCTTTTaGCTGCGTTCACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCGLGCF*LRSHRD
Trigger: GTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGCGCTGCATTGGGAGTaGCCCAGACCTAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPALHWE*PRPSFR
Trigger: CCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTTGGCTGACAAGGCGCTaGATTGGGAGTGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPWLTRR*IGSAPD
Trigger: GTCTGGGGCACTCCCAATGCAGCGCCTTGTCAGCCA...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTCCTTTGGACATAAGCTaGCACAGTCCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPPLDIS*HSPCLP
Trigger: GGGCAGGCAGGGACTGTGGCAGCTTATGTCCAAAGG...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTGCCACGACTGGCCATaGCCCTCAAACGACCGAGAT +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWECHDWP*PSNDRD
Trigger: ATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTTGCAGAGTAAATGTGTaGCGTGACACCCAGTATGCG +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSCRVNV*RDTQYA
Trigger: CGCATACTGGGTGTCACGGCACACATTTACTCTGCA...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTCGCAGCAGGTGCCCTaGCTCCAGCAGGAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCSQQVP*LQQEAK
Trigger: TTTTGCTTCCTGCTGGAGGCAGGGCACCTGCTGCGA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGCTGGGTCGCAGCAGGTaGCCTGCCTCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRLGRSR*PASSRK
Trigger: CTTCCTGCTGGAGGCAGGGCACCTGCTGCGACCCAG...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAACCCGCGACAGAAACTaGCCCCTTCCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGTRDRN*PLPGPL
Trigger: AAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGT...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCATGGACAGGAGGCTTTaGTTTGACTGGCGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCMDRRL*FDWRRY
Trigger: GTACCTCCGCCAGTCAAACCAAAGCCTCCTGTCCAT...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCGTGATGATTTTGCCTTaGGTGCTGTCATGGGGCACG +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCVMILP*VLSWGT
Trigger: CGTGCCCCATGACAGCACCCAAGGCAAAATCATCAC...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGACTGGCTTGCTCACGATaGAAACCTTGCGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRLACSR*KPCALA
Trigger: AGCGAGGGCGCAAGGTTTCCATCGTGAGCAAGCCAG...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGTGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGCLCDG*PGFGLW
Trigger: CCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCA...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCCGTGCTCAGTCCTGTaGCTTCAATGTACTCAATAC +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGPCSVL*LQCTQY
Trigger: GTATTGAGTACATTGAAGCCACAGGACTGAGCACGG...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGCCCCAGGTCTTGGTaGCTCACAGCGTGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLRPRSW*LTACVR
Trigger: CCGAACACACGCTGTGAGCCACCAAGACCTGGGGCG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLSRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACAGGCCCAGGGTACCTaGCAGCCCAGCCGATGGTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPQAQGT*QPSRWY
Trigger: GTACCATCGGCTGGGCTGCCAGGTACCCTGGGCCTG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCTEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLTEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCAGCTACGTGGGGTGGTaGTCCAGGGAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFSYVGW*SREQRE
Trigger: CTCCCTCTGTTCCCTGGACCACCACCCCACGTAGCT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGTGGTGGCAGAGCCGTaGCCTACACGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREVVAEP*PTRSQG
Trigger: TCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCAC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAGCTGGGCTAGGGTGGTaGTGGATGATATGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPAGLGW*WMICRH
Trigger: GTGCCTGCATATCATCCACCACCACCCTAGCCCAGC...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGAAGGGCTGTCTGGCATaGGGCCCTCTGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGKGCLA*GPLHPT
Trigger: AGTGGGGTGCAGAGGGCCCCATGCCAGACAGCCCTT...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGCTGGGGTCCAGGGCTaGGGGAGTTTGGGAACGTTT +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPAGVQG*GSLGTF
Trigger: AAACGTTCCCAAACTCCCCCAGCCCTGGACCCCAGC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAGCTGGGGTCCAGGGCTaGGGGAGTTTGGGAACGTTT +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGAGVQG*GSLGTF
Trigger: AAACGTTCCCAAACTCCCCCAGCCCTGGACCCCAGC...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTGGAATCGGGCCAGGTaGCTTGGGACGTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLWNRAR*LGTWLL
Trigger: CAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGTGGCTTCCTGTGCATaGGGGCTCCCTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGVASCA*GLPLDI
Trigger: TATGTCCAAAGGGAGCCCCCATGCACAGGAAGCCAC...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTACAAGAGGAACCCTGTaGCTTCCTGTGCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCTRGTL*LPVHGG
Trigger: GCCCCCATGCACAGGAAGCCACAGGGTTCCTCTTGT...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCAGGGACGCTCCTCTGTaGCTCCCATGCAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVRDAPL*LPCKCP
Trigger: TGGGCACTTGCATGGGAGCCACAGAGGAGCGTCCCT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGAGGGACGCTCCTCTGTaGCTCCCATGCAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQRDAPL*LPCKCP
Trigger: TGGGCACTTGCATGGGAGCCACAGAGGAGCGTCCCT...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGCAACAAAAGCGGGAGTaGGGGCAGCATGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLQQKRE*GQHGPN
Trigger: GTTGGGACCATGCTGCCCCCACTCCCGCTTTTGTTG...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGATCCTGCAGAAGAATCTaGGTCGCAGCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRSCRRI*VAAGAL
Trigger: CAGGGCACCTGCTGCGACCCAGATTCTTCTGCAGGA...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGTCCTGCAGAAGAATCTaGGTCGCAGCAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTESCRRI*VAAGAL
Trigger: CAGGGCACCTGCTGCGACCCAGATTCTTCTGCAGGA...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGCCCCCATCCCCTTCTaGCCAGCGAGCTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGAPIPF*PASCSY
Trigger: ATAGGAGCAGCTCGCTGGCCAGAAGGGGATGGGGGC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 72 bp GCAGGCCCTCAGGCCACAGCTCCAGGCATCCTGGTTTaGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: AGPQATAPGILV*LPQRRGSAPPV
Trigger: CACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTGGCCTGAGGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCAAAGTCACTGGTGCTaGGGACGGAGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSQSHWC*GRRYGP
Trigger: TGGACCATACCTCCGTCCTCAGCACCAGTGACTTTG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCAAAGTCACTGGTGCTaGGGACGGAGGTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPQSHWC*GRRYGP
Trigger: TGGACCATACCTCCGTCCTCAGCACCAGTGACTTTG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGCTGTAGCTATCTGCTaGCTCTGCTGCTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGAVAIC*LCCLRA
Trigger: AGCTCTCAAGCAGCAGAGTCAGCAGATAGCTACAGC...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTGCTTTCCGGGAGTTATaGAAGGAGAAGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLAFREL*KEKSPG
Trigger: ACCTGGAGACTTCTCCTTTCATAACTCCCGGAAAGC...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGGGAGATGGACTAAATaGTTATCCCGCCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQGRWTK*LSRRPS
Trigger: GCTGGGCCGGCGGGATAATCATTTAGTCCATCTCCC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTGGACAGAGAAGGCAGTaGTGTGTCTTCTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLGQRRQ*CVFSKQ
Trigger: CTGTTTCGAGAAGACACATCACTGCCTTCTCTGTCC...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGAGAACTGGAGACAGTaGGCCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPENWRQ*ASRPQR
Trigger: CCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCCACCCCCAATTACGTaGGGAGCTGACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAPPPIT*GADQVS
Trigger: GCTCACCTGGTCAGCTCCTCACGTAATTGGGGGTGG...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPARSSR*EAEVSG
Trigger: CCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTAGGGCTGCAGGGCCGTaGTTCGATGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCRAAGP*FDEVEK
Trigger: CTTTTCAACCTCATCGAAGCACGGCCCTGCAGCCCT...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGCGCTCGATATGCTCATaGTTGAGGCGGTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLRSICS*LRRWMC
Trigger: GCACATCCACCGCCTCAAGCATGAGCATATCGAGCG...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCACTCCTACGCTCGATATaGTCATGCTTGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPLLRSI*SCLRRW
Trigger: CCACCGCCTCAAGCATGAGCATATCGAGCGTAGGAG...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTGGGCCTCGTATAGCTaGTCTGCAGGGACGGTATCC +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFWASYS*SAGTVS
Trigger: GGATACCGTCCCTGCAGAGCAGCTATACGAGGCCCA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTCACGATGGAAACCTTaGGCCCTCGCTCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWESRWKP*ALALES
Trigger: GCTCTCTAGAGCGAGGGCGCAAGGTTTCCATCGTGA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTCCGTTGTTCTGATCTaGAGAGCCAGCGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVSVVLI*RASALS
Trigger: GCTGAGGGCGCTGGCTCTGCAGATCAGAACAACGGA...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGAACCCCAACCCCAAGTaGACCTGGCACCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQNPNPK*TWHLPA
Trigger: AGCTGGAAGGTGCCAGGTGCACTTGGGGTTGGGGTT...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTGGTGGTGGATGATATaGAGGCACAGCGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTWWWMI*RHSASG
Trigger: CCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGTAGAGAGCCCAGGTaGTCCTCCTCACCACCCCCT +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACGREPR*SSSPPP
Trigger: AGGGGGTGGTGAGGAGGAGCACCTGGGCTCTCTACC...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGGTAGAGAGCCCAGGTaGTCCTCCTCACCACCCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPGREPR*SSSPPP
Trigger: AGGGGGTGGTGAGGAGGAGCACCTGGGCTCTCTACC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGCGCTGCATTGGGAGTaGCCCAGACCTAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREALHWE*PRPSFR
Trigger: CCTGAAACTAGGTCTGGGGCACTCCCAATGCAGCGC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCCTTTGGACATAAGCTaGCACAGTCCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREPLDIS*HSPCLP
Trigger: GGGCAGGCAGGGACTGTGGCAGCTTATGTCCAAAGG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTGCCACGACTGGCCATaGCCCTCAAACGACCGAGAT +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFCHDWP*PSNDRD
Trigger: ATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGCCCTCACACGGTGTCTaGGCTCTCGCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGPSHGV*ALAGQG
Trigger: CCCCTGCCCAGCGAGAGCGCAGACACCGTGTGAGGG...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCTTTGCACCAAGGGCTaGTGTCCCCTCACACGGTGT +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPLCTKG*CPLTRC
Trigger: ACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAG...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCTTTGCACCAAGGGCTaGTGTCCCCTCACACGGTGT +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVLCTKG*CPLTRC
Trigger: ACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPISLWL*TKGCCP
Trigger: GGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGAT...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSISLWL*TKGCCP
Trigger: GGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGAT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTCGCAGCAGGTGCCCTaGCTCCAGCAGGAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVSQQVP*LQQEAK
Trigger: TTTTGCTTCCTGCTGGAGGCAGGGCACCTGCTGCGA...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCAGTGAGGCACAGGGATaGCCCCATCCCCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACSEAQG*PHPLLA
Trigger: GGCCAGAAGGGGATGGGGGCATCCCTGTGCCTCACT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCAGCAGCTTTCCGTCTaGCATTTGTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPQQLSV*HLFLLK
Trigger: TTTGAGCAGAAACAAATGCCAGACGGAAAGCTGCTG...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTCATGCTTGAGGCGGTaGATGTGCTGTAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCSCLRR*MCCRNS
Trigger: GCTGTTTCTACAGCACATCCACCGCCTCAAGCATGA...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAAGCGTCCACACAAGCTaGGCAGCTGGGGCATGTCTC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLSVHTS*AAGACL
Trigger: GAGACATGCCCCAGCTGCCCAGCTTGTGTGGACGCT...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCCCGCCGGCCCAGCGTaGACTCTCTACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAPAGPA*TLYSSL
Trigger: TAGAGAAGAGTAGAGAGTCCACGCTGGGCCGGCGGG...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCAGTTTATGCTGGGGTTaGCTACAGGGGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCSLCWG*LQGMLV
Trigger: CACAAGCATCCCCTGTAGCCAACCCCAGCATAAACT...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCCCTTGGGTGCTGTCATaGGGCACGGAGTATATGTTT +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCPWVLS*GTEYMF
Trigger: AAACATATACTCCGTGCCCCATGACAGCACCCAAGG...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGTGATGATTTTGCCTTaGGTGCTGTCATGGGGCACG +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGVMILP*VLSWGT
Trigger: CGTGCCCCATGACAGCACCCAAGGCAAAATCATCAC...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCTGGCTTGCTCACGATaGAAACCTTGCGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTLACSR*KPCALA
Trigger: AGCGAGGGCGCAAGGTTTCCATCGTGAGCAAGCCAG...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCTGGCTTGCTCACGATaGAAACCTTGCGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPLACSR*KPCALA
Trigger: AGCGAGGGCGCAAGGTTTCCATCGTGAGCAAGCCAG...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCCTCTTTCTTCCGGATaGGCCCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEPLSSG*APAHHH
Trigger: GTGATGATGAGCTGGGGCCCATCCGGAAGAAAGAGG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGCCTCTTTCTTCCGGATaGGCCCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLPLSSG*APAHHH
Trigger: GTGATGATGAGCTGGGGCCCATCCGGAAGAAAGAGG...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTCCGGGGTTTGGGCTTTaGTTTCTTAGTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLPGFGL*FLSVPP
Trigger: AGGAGGAACACTAAGAAACCAAAGCCCAAACCCCGG...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGATGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRCLCDG*PGFGLW
Trigger: CCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCA...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGTGCCTTTGTGATGGATaGCCGGGGTTTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTECLCDG*PGFGLW
Trigger: CCAAAGCCCAAACCCCGGCCATCCATCACAAAGGCA...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCAGAAAAAGCTCTTCATaGCACCAGCCACGGTATTCA +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGRKSSS*HQPRYS
Trigger: TGAATACCGTGGCTGGTGCCATGAAGAGCTTTTTCT...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGTGTCGCCCCAGGTCTTaGTGGCTCACAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQCRPRS*WLTACV
Trigger: AACACACGCTGTGAGCCACCAAGACCTGGGGCGACA...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCTGTCCCCAGTGGACTTaGTTTTGTTCAAGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RRARAGQLQTPGKGVHQACPQWT*FCSRPN
Trigger: ATTTGGCCTTGAACAAAACCAAGTCCACTGGGGACA...GGCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCGTTTCGGGAAGGCTGTaGAGTGGGACGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPVSGRL*SGTVGM
Trigger: CATCCCCACCGTCCCACTCCACAGCCTTCCCGAAAC...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGGGCTAGGGTGGTGGTaGATGATATGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTGLGWW*MICRHS
Trigger: GCTGTGCCTGCATATCATCCACCACCACCCTAGCCC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCTTTTCCTGGGGCAGTaGGAAGGCTGGGCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPLFLGQ*EGWARV
Trigger: CACCCTAGCCCAGCCTTCCCACTGCCCCAGGAAAAG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCACTAGCTCTCGCCTaGGGGGTGCCTAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPLALA*GVPSVR
Trigger: CCTGACACTAGGCACCCCCCAGGCGAGAGCTAGTGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTAGGGCTGGGGGAGTTTaGGAACGTTTCTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCRAGGV*ERFCQP
Trigger: AGGTTGGCAGAAACGTTCCCAAACTCCCCCAGCCCT...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTAGGGCTGGGGGAGTTTaGGAACGTTTCTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHARAGGV*ERFCQP
Trigger: AGGTTGGCAGAAACGTTCCCAAACTCCCCCAGCCCT...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRESSEGD*AAFACV
Trigger: AACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCT...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATGGAATCGGGCCAGGTaGCTTGGGACGTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGWNRAR*LGTWLL
Trigger: CAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCCGCACATACATCTGTaGAATCGGGCCAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPPHIHL*NRARWL
Trigger: AAGCCACCTGGCCCGATTCCACAGATGTATGTGCGG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCCCACGTCCCCATTCTaGACAAGCCAACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACPTSPF*TSQRPP
Trigger: GGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGCCAGGATCAGTCTCTaGCTTTGCACCAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREARISL*LCTKGC
Trigger: GCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCGAAAGTGGTCATTATTaGCCACTCGCCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCESGHY*PLALQS
Trigger: ACTTTGGAGGGCGAGTGGTCAATAATGACCACTTTC...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTGCTGTAGCTATCTGCTaGCTCTGCTGCTTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPAVAIC*LCCLRA
Trigger: AGCTCTCAAGCAGCAGAGTCAGCAGATAGCTACAGC...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCGATATGCTCATGCTTaGGGCGGTGGATGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPRYAHA*GGGCAV
Trigger: TACAGCACATCCACCGCCTCAAGCATGAGCATATCG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPSMLSM*LVASHG
Trigger: CCCATGGGATGCCACCAGTCACATTGACAACATGGA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGCTTCCGTCAATTTCTTaGGCAATCTCCTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGLPSIS*AISSPS
Trigger: TGAGGGGGAGGAGATTGCTCAAGAAATTGACGGAAG...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCCTGTTTCGTATGGAATaGCAGCATTGTCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGLFRME*QHCPLY
Trigger: ATAAAGGGGACAATGCTGTCATTCCATACGAAACAG...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCCAGGTTGCCTTTGTaGTGGATGGCCGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPRLPL*WMAGVW
Trigger: CCAAACCCCGGCCATCCATCACAAAGGCAACCTGGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGGCTGGTGCTCCCACTaGGGTCTTGAGAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFGWCSH*GLEKVM
Trigger: CATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGGTGGGACGGTGGGGATaGAGCGGGGAGTCCCACACT +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGVGRWG*SGESHT
Trigger: AGTGTGGGACTCCCCGCTTCATCCCCACCGTCCCAC...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTACTAGACCTAAGTGGGTaGGTGGGACCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLLDLSG*VGPQQA
Trigger: GGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAG...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGTCCTGGGCCACTTTCTaGCCTGGACACAGACGATGT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQSWATF*PGHRRC
Trigger: ACATCGTCTGTGTCCAGGTCAGAAAGTGGCCCAGGA...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCGCTCGATATGCTCATaGTTGAGGCGGTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLRERSICS*LRRWMC
Trigger: GCACATCCACCGCCTCAAGCATGAGCATATCGAGCG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACTCCTACGCTCGATATaGTCATGCTTGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGLLRSI*SCLRRW
Trigger: CCACCGCCTCAAGCATGAGCATATCGAGCGTAGGAG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTATGGGCCTCGTATAGCTaGTCTGCAGGGACGGTATCC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLWASYS*SAGTVS
Trigger: GGATACCGTCCCTGCAGAGCAGCTATACGAGGCCCA...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGTGCGTCCGTAACCAATaGCAGCAGAAGCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQCVRNQ*QQKQGR
Trigger: TCGACCCTGCTTCTGCTGGCATTGGTTACGGACGCA...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTAGCGCCATCAGTGAGTaGTACAAGCTGAATAGGGAT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLSAISE*YKLNRD
Trigger: ATCCCTATTCAGCTTGTAGCACTCACTGATGGCGCT...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACCTGCAGGTTTGAGTTaGAGAGCGGTGATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLPAGLS*RAVILP
Trigger: GGGCAGGATCACCGCTCTGCAACTCAAACCTGCAGG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCGTTACTCTCCCAGGTTaGCTTTGTGATGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRVTLPG*LCDGWP
Trigger: CGGCCATCCATCACAAAGGCAACCTGGGAGAGTAAC...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGGCGGGCACGGGCAGGGCAGCTGCAGACGCCCGGGAAAGGTGTCCATCAGGCAAGAAGAAGGGGCACTaGTGGATAAAGAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: QAGTGRAAADARERCPSGKKKGH*WIKSSM
Trigger: CATTGAACTCTTTATCCAGCAGTGCCCCTTCTTCTT...GCCTGATGGACACCTTTCCCGGGCGTCTGCAGCTGCCCTGCCCGTGCCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGTTGTTCAAGGCCAAATaGCACCCCGTCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTELFKAK*HPVRER
Trigger: CCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAA...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCYLGGV*RWKVGR
Trigger: TCTTCCCACCTTCCATCTGCACACACCCCCAAGGTA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTACCTTGGGGGTGTGTaGAGATGGAAGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEYLGGV*RWKVGR
Trigger: TCTTCCCACCTTCCATCTGCACACACCCCCAAGGTA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGGCATCCTGGTTTTGCTaGCACAAAGACGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEASWFC*HKDEGQ
Trigger: CTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGC...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGTGGTGGTGGATGATATaGAGGCACAGCGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGWWWMI*RHSASG
Trigger: CCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGGGCTGCTTTTGCCTaGGTTCACACAGGGACGGCC +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTWAAFA*VHTGTA
Trigger: GGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCA...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAGGACTGGGCTGCTTTTaGCTGCGTTCACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLGLGCF*LRSHRD
Trigger: GTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAGTCC...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATGCCACGACTGGCCATaGCCCTCAAACGACCGAGAT +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRCHDWP*PSNDRD
Trigger: ATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCTTTGCACCAAGGGCTaGTGTCCCCTCACACGGTGT +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPALCTKG*CPLTRC
Trigger: ACACCGTGTGAGGGGACAGCAGCCCTTGGTGCAAAG...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCATCAGTCTCTGGCTTTaGACCAAGGGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTISLWL*TKGCCP
Trigger: GGGACAGCAGCCCTTGGTGCAAAGCCAGAGACTGAT...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCTTCTGGCCAGCGAGCTaGTCCTATGATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVFWPAS*SYDVTL
Trigger: GAGGGTGACATCATAGGAGCAGCTCGCTGGCCAGAA...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATCTTTACCAAGGGGATaGTGGCTTGACCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGSLPRG*WLDPGL
Trigger: GAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGACCCGCGACAGAAACTaGCCCCTTCCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRTRDRN*PLPGPL
Trigger: AAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTGCTCCAGCCCCAGCTaGTCAGTGCAAAAGTACATG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCCSSPS*SVQKYM
Trigger: CATGTACTTTTGCACTGACCAGCTGGGGCTGGAGCA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCATGCTCCAGCCCCAGCTaGTCAGTGCAAAAGTACATG +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPCSSPS*SVQKYM
Trigger: CATGTACTTTTGCACTGACCAGCTGGGGCTGGAGCA...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCACGCTTCCCTGACCGGACGCTGAAGGCCGGCCTGCCACGACTGGCCATGCCCGCATCACGCTCTGCTTaGAGCTTTTGTAATGCTTTA +
Preference number: 4 (lower is better)
Translates to: ARFPDRTLKAGLPRLAMPASRSA*SFCNAL
Trigger: TAAAGCATTACAAAAGCTCCAAGCAGAGCGTGATGC...GGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGAAGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCGAGCTCGAATCTCATTaGCCAACTCTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVELESH*PTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAGATTCGAGCTC...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTGACATTCCCCTCTATTaGCCTCAGGGAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLDIPLY*PQGKLI
Trigger: TATGAGCTTTCCCTGAGGCCAATAGAGGGGAATGTC...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATGGGCCAGAAGCAGATaGAGAGGTTCTCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGWARSR*RGSRWS
Trigger: TGACCAGCGAGAACCTCTCCATCTGCTTCTGGCCCA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGGGCTAGGGTGGTGGTaGATGATATGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAGLGWW*MICRHS
Trigger: GCTGTGCCTGCATATCATCCACCACCACCCTAGCCC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTGGGCAGTGGGAAGGCTaGGCTAGGGTGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPGQWEG*ARVVVD
Trigger: ATCCACCACCACCCTAGCCCAGCCTTCCCACTGCCC...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAAAGGGCTGTCTGGCATaGGGCCCTCTGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVKGCLA*GPLHPT
Trigger: AGTGGGGTGCAGAGGGCCCCATGCCAGACAGCCCTT...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGGTCCATCAGGCCCCCTaGAATACACCACAGATCCTA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEVHQAP*NTPQIL
Trigger: TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGAC...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGCTGGGGTCCAGGGCTaGGGGAGTTTGGGAACGTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPAGVQG*GSLGTF
Trigger: AAACGTTCCCAAACTCCCCCAGCCCTGGACCCCAGC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGGCGGGGTCAGTAAATaGGGCCGTTTCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGGGVSK*GRFLIC
Trigger: GCAGATGAGGAAACGGCCCCATTTACTGACCCCGCC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPSSEGD*AAFACV
Trigger: AACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCT...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGTGGAATCGGGCCAGGTaGCTTGGGACGTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGWNRAR*LGTWLL
Trigger: CAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCA...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCCCGCACATACATCTGTaGAATCGGGCCAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFPHIHL*NRARWL
Trigger: AAGCCACCTGGCCCGATTCCACAGATGTATGTGCGG...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTTCCTGGGGAAGTCACTaGCCGCACATACATCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPSWGSH*PHIHLW
Trigger: CCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGA...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCATGCAAGTGCCCATTTaGGCTGCACGCTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTMQVPI*AARFPD
Trigger: GTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCAT...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGCACGCCACCCAGCCTTaGGTCTTCCCTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWHATQP*VFPLQP
Trigger: CGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCCAAACGCTAGGCGATaGGAAAGACGGGGACAATGC +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVPNARR*ERRGQC
Trigger: GCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCCAAACGCTAGGCGATaGGAAAGACGGGGACAATGC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREPNARR*ERRGQC
Trigger: GCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGCAAAACCAAGGCGGTaGAGGCAGGAGAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRAKPRR*RQESTE
Trigger: CTCCGTGCTCTCCTGCCTCCACCGCCTTGGTTTTGC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGCCCCCATCCCCTTCTaGCCAGCGAGCTGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVAPIPF*PASCSY
Trigger: ATAGGAGCAGCTCGCTGGCCAGAAGGGGATGGGGGC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCCACTAGCTCTCGCCTaGGGGGTGCTTAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVPLALA*GVLSVS
Trigger: AGAAACACTAAGCACCCCCCAGGCGAGAGCTAGTGG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614079.1
CDS-3UTR TCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAGCTTTCCGGGAGTTATaGAAGGAGAAGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPAFREL*KEKSPG
Trigger: ACCTGGAGACTTCTCCTTTCATAACTCCCGGAAAGC...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGAGAGTGAATTTTTCTaGTTCCGGTCAGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPESEFF*FRSDGR
Trigger: CCGGCCGTCTGACCGGAATCAGAAAAATTCACTCTC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGAGACAGCCGTGGGGCTaGAATGTTGGCGTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPARQPWG*NVGVWK
Trigger: TTTCCAGACGCCAACATTTCAGCCCCACGGCTGTCT...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGAGACAGCCGTGGGGCTaGAATGTTGGCGTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGRQPWG*NVGVWK
Trigger: TTTCCAGACGCCAACATTTCAGCCCCACGGCTGTCT...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTCTTCCGTCAATTTCTTaGGCAATCTCCTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHALPSIS*AISSPS
Trigger: TGAGGGGGAGGAGATTGCTCAAGAAATTGACGGAAG...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGGACAGAGAAGGCAGTaGTGTGTCTTCTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRGQRRQ*CVFSKQ
Trigger: CTGTTTCGAGAAGACACATCACTGCCTTCTCTGTCC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGCAGGAGGCTTTGGTTTaGCTGGCGGAGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQQEALV*LAEVLC
Trigger: ACAAAGTACCTCCGCCAGTCAAACCAAAGCCTCCTG...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCCAGGAGGCTTTGGTTTaGCTGGCGGAGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVQEALV*LAEVLC
Trigger: ACAAAGTACCTCCGCCAGTCAAACCAAAGCCTCCTG...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCAGCGTGTGTTCGGCTTaGAGCTGGGAGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACSVCSA*SWEGSS
Trigger: ACTGCTTCCCTCCCAGCTTCAAGCCGAACACACGCT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGGCTGGTGCTCCCACTaGGGTCTTGAGAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRGWCSH*GLEKVM
Trigger: CATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCC...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGAGTAAATGTGTGCCGTaGCACCCAGTATGCGACACA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPSKCVP*HPVCDT
Trigger: TGTGTCGCATACTGGGTGTCACGGCACACATTTACT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAACCCTCTGTCCACCGTaGCAAAGACAGACACATCCT +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGTLCPP*QRQTHP
Trigger: AGGATGTGTCTGTCTTTGTCACGGTGGACAGAGGGT...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCACCCTCTGTCCACCGTaGCAAAGACAGACACATCCT +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFTLCPP*QRQTHP
Trigger: AGGATGTGTCTGTCTTTGTCACGGTGGACAGAGGGT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCGGCGCACGAAGCGGTTaGACAAACAAGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRGARSG*TNKTFQ
Trigger: TTGGAAAGTCTTGTTTGTGCAACCGCTTCGTGCGCC...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTCGAGAACTAATCAAGTaGTCAATCTTAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSRELIK*SILAST
Trigger: TGTGGACGCTAAGATTGAGCACTTGATTAGTTCTCG...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCTGCAGGTTTGAGTTaGAGAGCGGTGATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPAGLS*RAVILP
Trigger: GGGCAGGATCACCGCTCTGCAACTCAAACCTGCAGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTATCACGATGGAAACCTTaGGCCCTCGCTCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLSRWKP*ALALES
Trigger: GCTCTCTAGAGCGAGGGCGCAAGGTTTCCATCGTGA...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTGTACAGCACTGGCTTaGTCACGATGGAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCCTALA*SRWKPC
Trigger: GCAAGGTTTCCATCGTGAGCAAGCCAGTGCTGTACA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTCCACCAAGTCGATCTaGATGTTATACGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWESTKSI*MLYGTR
Trigger: CCTGGTCCCGTATAACATGCAGATCGACTTGGTGGA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATTGTTCAAGGCCAAATaGCACCCCGTCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGLFKAK*HPVRER
Trigger: CCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTACCCCATGAACACTCCTaGTGGTGGCCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVPHEHS*WWPPWL
Trigger: CAGCCATGGAGGCCACCAGCAGGAGTGTTCATGGGG...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTGTWLL*SHKRGG
Trigger: GCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTCCCTGTGGCTTCCTGTaGATGGGGGCTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPPCGFL*MGAPFG
Trigger: TCCAAAGGGAGCCCCCATGCACAGGAAGCCACAGGG...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGTGCAGAGTAAATGTGTaGCGTGACACCCAGTATGCG +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTECRVNV*RDTQYA
Trigger: CGCATACTGGGTGTCACGGCACACATTTACTCTGCA...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTTGATGACAAGTCACTaGAGCTGGCCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSLMTSH*SWPAVK
Trigger: CTTCACAGCAGGCCAGCTGCAGTGACTTGTCATCAA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCTTGATGACAAGTCACTaGAGCTGGCCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRLMTSH*SWPAVK
Trigger: CTTCACAGCAGGCCAGCTGCAGTGACTTGTCATCAA...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTAACCCGCGACAGAAACTaGCCCCTTCCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLTRDRN*PLPGPL
Trigger: AAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGT...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGGCGCATTGGCCACGCTaGACCGACCGCACCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKAHWPR*TDRTAA
Trigger: GGCCGCGGTGCGGTCGGTGCAGCGTGGCCAATGCGC...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGGGGTGGGCTGGACATaGAGCAAAAATGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPGVGWT*SKNARS
Trigger: GGACCTGGCATTTTTGCTGCATGTCCAGCCCACCCC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTTTCCAATCCCACACTaGCCCTTTTCCTTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPFPIPH*PFSFSV
Trigger: GACCGAGAAGGAAAAGGGCCAGTGTGGGATTGGAAA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCGTAGAAACAGCTTCTTaGCTTTCTGAGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCVETAS*LSESLP
Trigger: TGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTAC...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTCATGCTTGAGGCGGTaGATGTGCTGTAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPSCLRR*MCCRNS
Trigger: GCTGTTTCTACAGCACATCCACCGCCTCAAGCATGA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTACCCGCCGGCCCAGCGTaGACTCTCTACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLPAGPA*TLYSSL
Trigger: TAGAGAAGAGTAGAGAGTCCACGCTGGGCCGGCGGG...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAGTTTATGCTGGGGTTaGCTACAGGGGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSSLCWG*LQGMLV
Trigger: CACAAGCATCCCCTGTAGCCAACCCCAGCATAAACT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGTCACCACAGCATCCATaGGTTCAGCATAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGSPQHP*VQHSQK
Trigger: CTTCTGACTATGCTGAACCCATGGATGCTGTGGTGA...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCCGGGGTTTGGGCTTTaGTTTCTTAGTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEPGFGL*FLSVPP
Trigger: AGGAGGAACACTAAGAAACCAAAGCCCAAACCCCGG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTCGCCCCAGGTCTTaGTGGCTCACAGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTCRPRS*WLTACV
Trigger: AACACACGCTGTGAGCCACCAAGACCTGGGGCGACA...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTTGTCCCCAGTGGACTTaGTTTTGTTCAAGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: AEPWPTRSQGGRQPGCTLCPQWT*FCSRPN
Trigger: ATTTGGCCTTGAACAAAACCAAGTCCACTGGGGACA...AAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTGCCTCTGTCCCCAGTaGACTTGGTTTTGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSCLCPQ*TWFCSR
Trigger: CCTTGAACAAAACCAAGTCCACTGGGGACAGAGGCA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGTGCCTCTGTCCCCAGTaGACTTGGTTTTGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWECLCPQ*TWFCSR
Trigger: CCTTGAACAAAACCAAGTCCACTGGGGACAGAGGCA...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPSRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAAGCCGATGGTACCATTaGCTGGTGCTCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSRWYH*LVLPLR
Trigger: CCTCAGTGGGAGCACCAGCCAATGGTACCATCGGCT...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCCADGR*EETDQQ
Trigger: CTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCTGTACCCTTACCTTaGGGGTGTGTGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQAVPLP*GCVQME
Trigger: TTCCATCTGCACACACCCCCAAGGTAAGGGTACAGC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGCGACTAGACCTAAGTaGGTGAGTGGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPATRPK*VSGTPA
Trigger: TGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGCGACTAGACCTAAGTaGGTGAGTGGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACATRPK*VSGTPA
Trigger: TGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGC...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGAAGGCTGGGCTAGGGTaGTGGTGGATGATATGCAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGKAGLG*WWMICR
Trigger: CCTGCATATCATCCACCACCACCCTAGCCCAGCCTT...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPSKHLR*PLRTGD
Trigger: GTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGAGCAGTGAGGGGGACTaGGCTGCTTTTGCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRSSEGD*AAFACV
Trigger: AACGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGAGGTGGCTTGGGACGTaGCTTTTGTGCTCACACAAA +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTERWLGT*LLCSHK
Trigger: TTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCT...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAACAAGAGGAACCCTGTaGCTTCCTGTGCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILTRGTL*LPVHGG
Trigger: GCCCCCATGCACAGGAAGCCACAGGGTTCCTCTTGT...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACAACAAAAGCGGGAGTaGGGGCAGCATGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPQQKRE*GQHGPN
Trigger: GTTGGGACCATGCTGCCCCCACTCCCGCTTTTGTTG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGCCAGGATCAGTCTCTaGCTTTGCACCAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPARISL*LCTKGC
Trigger: GCAGCCCTTGGTGCAAAGCCAGAGACTGATCCTGGC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTGCCAAGAATTCTAAGTaGATTCACGAGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAAKNSK*IHEPRH
Trigger: GTGGCGTGGCTCGTGAATCCACTTAGAATTCTTGGC...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGCCAAACGCTAGGCGATaGGAAAGACGGGGACAATGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGPNARR*ERRGQC
Trigger: GCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGG...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTGCGAAACAGAATTTTaGGCACACAGCCAGACTACT +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCCETEF*AHSQTT
Trigger: AGTAGTCTGGCTGTGTGCCCAAAATTCTGTTTCGCA...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAGAAAGTGGTCATTATTaGCCACTCGCCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPESGHY*PLALQS
Trigger: ACTTTGGAGGGCGAGTGGTCAATAATGACCACTTTC...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGACATGAGTTTTTCAGCTaGTGCAAGCTTGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGHEFFS*CKLGRS
Trigger: GCTGCGACCAAGCTTGCATCAGCTGAAAAACTCATG...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATACATTGGATCTCGCTaGGGTCTCCACAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRYIGSR*GLHNLE
Trigger: CTCCAGGTTGTGGAGACCTCAGCGAGATCCAATGTA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGTACATTGGATCTCGCTaGGGTCTCCACAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGYIGSR*GLHNLE
Trigger: CTCCAGGTTGTGGAGACCTCAGCGAGATCCAATGTA...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGGTTGCACTAAGGTGCTaGAAGCCAAGTCCACGTTTA +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEVALRC*KPSPRL
Trigger: TAAACGTGGACTTGGCTTTCAGCACCTTAGTGCAAC...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGCTTTCCGGGAGTTATaGAAGGAGAAGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQAFREL*KEKSPG
Trigger: ACCTGGAGACTTCTCCTTTCATAACTCCCGGAAAGC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTCTCCCAGAACATCCTaGATAACACCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPSPRTS*ITPIFS
Trigger: GGAGAAGATGGGTGTTATTCAGGATGTTCTGGGAGA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTTCTCCCAGAACATCCTaGATAACACCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHASPRTS*ITPIFS
Trigger: GGAGAAGATGGGTGTTATTCAGGATGTTCTGGGAGA...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGAGAGTGAATTTTTCTaGTTCCGGTCAGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGESEFF*FRSDGR
Trigger: CCGGCCGTCTGACCGGAATCAGAAAAATTCACTCTC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGACAGGAGGCTTTGGTTTaGCTGGCGGAGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRQEALV*LAEVLC
Trigger: ACAAAGTACCTCCGCCAGTCAAACCAAAGCCTCCTG...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTATTGCCAGCCCCACCCTaGATCTCAGAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLLPAPP*ISEHPP
Trigger: AGGAGGATGCTCTGAGATTCAGGGTGGGGCTGGCAA...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATATCCTCCGTTGTTCTaGTCTGCAGAGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVYPPLF*SAEPAP
Trigger: GGGCGCTGGCTCTGCAGATCAGAACAACGGAGGATA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAACCTTCGTTGGCCATTaGGAACTGGAGACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRTFVGH*ELETVS
Trigger: GCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGT...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCACCTTCGTTGGCCATTaGGAACTGGAGACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPTFVGH*ELETVS
Trigger: GCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGT...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR TCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACACAGAAAACACGCCTaGACCCTGGGTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLHRKHA*TLGLFS
Trigger: GGAGAACAAACCCAGGGTTCAGGCGTGTTTTCTGTG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACTCCCTGACCGGACGCTaGAGGCCGGCCTGCCACGAC +
Preference number: 4 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHSLTGR*RPACHD
Trigger: GTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGA...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCGGCGCACGAAGCGGTTaGACAAACAAGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVGARSG*TNKTFQ
Trigger: TTGGAAAGTCTTGTTTGTGCAACCGCTTCGTGCGCC...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGAGGGCTGCAGGGCCGTaGTTCGATGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKRAAGP*FDEVEK
Trigger: CTTTTCAACCTCATCGAAGCACGGCCCTGCAGCCCT...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCTTGAGGCGGTGGATGTaGTGTAGAAACAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSLRRWM*CRNSFL
Trigger: CAAGAAGCTGTTTCTACAGCACATCCACCGCCTCAA...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACTCCTACGCTCGATATaGTCATGCTTGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPLLRSI*SCLRRW
Trigger: CCACCGCCTCAAGCATGAGCATATCGAGCGTAGGAG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAGCGCCATCAGTGAGTaGTACAAGCTGAATAGGGAT +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSSAISE*YKLNRD
Trigger: ATCCCTATTCAGCTTGTAGCACTCACTGATGGCGCT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTCCTGCAGGTTTGAGTTaGAGAGCGGTGATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPPAGLS*RAVILP
Trigger: GGGCAGGATCACCGCTCTGCAACTCAAACCTGCAGG...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCTTTATAACCCTGGGATaGCTGATCCTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCFITLG*LILLFL
Trigger: AAGAAAGAGGAGGATCAGGCATCCCAGGGTTATAAA...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTGTTCCTCCTTAGGCTaGGAAGAATATTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLCSSLG*EEYSSS
Trigger: GGAGGAGGAATATTCTTCGCAGCCTAAGGAGGAACA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCAGGGCATGCAACTTCTaGTCCCGGTCGTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVRACNF*SRSLIL
Trigger: CAAAATCAACGACCGGGAGCAGAAGTTGCATGCCCT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTACTGGAGCCATTGCCTaGCTAGTTCAGTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPTGAIA*LVQSSN
Trigger: ATTTGAGGACTGAACTAGGCAGGCAATGGCTCCAGT...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGGCCATTCCTTCAAAGTaGCCCACCTCGCCCACATCC +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWAIPSK*PTSPTS
Trigger: GGATGTGGGCGAGGTGGGGCACTTTGAAGGAATGGC...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTCCTATTTCTTAAAGTaGAACGAGCCCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLSYFLK*NEPQGL
Trigger: CAGCCCTTGGGGCTCGTTGCACTTTAAGAAATAGGA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAGTWLL*SHKRGG
Trigger: GCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGCCCTGTGGCTTCCTGTaGATGGGGGCTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGPCGFL*MGAPFG
Trigger: TCCAAAGGGAGCCCCCATGCACAGGAAGCCACAGGG...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACTGGGTCGCAGCAGGTaGCCTGCCTCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATLGRSR*PASSRK
Trigger: CTTCCTGCTGGAGGCAGGGCACCTGCTGCGACCCAG...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAAAGACAGACACATCCTaGAGAAGAATCTGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRKTDTS*RRIWVA
Trigger: TGCGACCCAGATTCTTCTGCAGGATGTGTCTGTCTT...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGAAGACAGACACATCCTaGAGAAGAATCTGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPKTDTS*RRIWVA
Trigger: TGCGACCCAGATTCTTCTGCAGGATGTGTCTGTCTT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTCTGGCCAGCGAGCTaGTCCTATGATGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILFWPAS*SYDVTL
Trigger: GAGGGTGACATCATAGGAGCAGCTCGCTGGCCAGAA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTGTGTGTGTGTGTGTaGGTGTCCAGAATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGVCVCV*VSRMPG
Trigger: ACCAGGCATTCTGGACACGCACACACACACACACAC...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTTTCCAATCCCACACTaGCCCTTTTCCTTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFFPIPH*PFSFSV
Trigger: GACCGAGAAGGAAAAGGGCCAGTGTGGGATTGGAAA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGAGTCCACGTTTACATTaGATCTCGCTGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPSPRLH*ISLRSP
Trigger: TGGAGACCTCAGCGAGATCCAATGTAAACGTGGACT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGAGTCCACGTTTACATTaGATCTCGCTGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWESPRLH*ISLRSP
Trigger: TGGAGACCTCAGCGAGATCCAATGTAAACGTGGACT...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGTGGCTGCCCCACGTCCCCATTCTGGACAAGCCAACGCCCTCCCACCCAGTGCAGCCAGTTCTCATTGTaGTTTTTCACAATGCGACTC +
Preference number: 4 (lower is better)
Translates to: GGCPTSPFWTSQRPPTQCSQFSL*FFTMRL
Trigger: GAGTCGCATTGTGAAAAACCACAATGAGAACTGGCT...GCACTGGGTGGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGGGCAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATGTCAATGTGACTGGTaGCATCCCATGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGCQCDW*HPMGSL
Trigger: AAGAGACCCCATGGGATGCCACCAGTCACATTGACA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGTGTCAATGTGACTGGTaGCATCCCATGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQCQCDW*HPMGSL
Trigger: AAGAGACCCCATGGGATGCCACCAGTCACATTGACA...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTGTTGTCAATGTGACTaGTGGCATCCCATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTCCQCD*WHPMGS
Trigger: AGACCCCATGGGATGCCACCAGTCACATTGACAACA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCTGTTGTCAATGTGACTaGTGGCATCCCATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFCCQCD*WHPMGS
Trigger: AGACCCCATGGGATGCCACCAGTCACATTGACAACA...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGCTCAGCTTCTCTAAGTaGGCCTCGTATAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQLSFSK*ASYSCS
Trigger: AGAGCAGCTATACGAGGCCCACTTAGAGAAGCTGAG...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGAGCTCGAATCTCATTaGCCAACTCTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPELESH*PTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAGATTCGAGCTC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGGACATTCCCCTCTATTaGCCTCAGGGAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEDIPLY*PQGKLI
Trigger: TATGAGCTTTCCCTGAGGCCAATAGAGGGGAATGTC...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGTGGGGCTGAAATGTTaGCGTCTGGAAAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPVGLKC*RLERVH
Trigger: GTGAACTCTTTCCAGACGCCAACATTTCAGCCCCAC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGATCTCAAGTTTATGCTaGGGTTGGCTACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLISSLC*GWLQGM
Trigger: CATCCCCTGTAGCCAACCCCAGCATAAACTTGAGAT...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGACCGCTGCCGTTGGACTaGGCTTTGTTGATATTCCGA +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRPLPLD*ALLIFR
Trigger: TCGGAATATCAACAAAGCCCAGTCCAACGGCAGCGG...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTCCTGTACAGCACTaGCTTGCTCACGATGGAAAC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLRPVQH*LAHDGN
Trigger: GTTTCCATCGTGAGCAAGCCAGTGCTGTACAGGACG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCCGGGGTTTGGGCTTTaGTTTCTTAGTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREPGFGL*FLSVPP
Trigger: AGGAGGAACACTAAGAAACCAAAGCCCAAACCCCGG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGCACTGTCCCGACCATaGGCTCTGTACAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVALSRP*ALYKQR
Trigger: CCTCTGCTTGTACAGAGCCCATGGTCGGGACAGTGC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCTGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAG +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTCADGR*EETDQQ
Trigger: CTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACA...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGGGGGTGTGTGCAGATaGAAGGTGGGAAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPGGVCR*KVGRDR
Trigger: TCTGTCTCTTCCCACCTTCCATCTGCACACACCCCC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGAACCCCAAGTGCACCTaGCACCTTCCAGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGNPKCT*HLPAVP
Trigger: GGGGACAGCTGGAAGGTGCCAGGTGCACTTGGGGTT...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGCATGAACACTCCTGCTaGTGGCCTCCATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWHEHSC*WPPWLG
Trigger: TCCCAGCCATGGAGGCCACCAGCAGGAGTGTTCATG...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGGCGGGGTCAGTAAATaGGGCCGTTTCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVGGVSK*GRFLIC
Trigger: GCAGATGAGGAAACGGCCCCATTTACTGACCCCGCC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGTGGCTTCCTGTGCATaGGGGCTCCCTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPVASCA*GLPLDI
Trigger: TATGTCCAAAGGGAGCCCCCATGCACAGGAAGCCAC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCATGCAAGTGCCCATTTaGGCTGCACGCTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACMQVPI*AARFPD
Trigger: GTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCAT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTCAACAAAAGCGGGAGTaGGGGCAGCATGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPQQKRE*GQHGPN
Trigger: GTTGGGACCATGCTGCCCCCACTCCCGCTTTTGTTG...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAGCCAAGAATTCTAAGTaGATTCACGAGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGAKNSK*IHEPRH
Trigger: GTGGCGTGGCTCGTGAATCCACTTAGAATTCTTGGC...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCGATTGGAGACAAACTTaGGCTGGTCATCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRDWRQT*AGHQSS
Trigger: GGAACTTTGATGACCAGCTCAAGTTTGTCTCCAATC...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCGTTGCACTAAGGTGCTaGAAGCCAAGTCCACGTTTA +
Preference number: 4 (lower is better)
Translates to: PECLVACGGLYQGDAGLTVALRC*KPSPRL
Trigger: TAAACGTGGACTTGGCTTTCAGCACCTTAGTGCAAC...GGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCCGATATGCTCATGCTTaGGGCGGTGGATGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTRYAHA*GGGCAV
Trigger: TACAGCACATCCACCGCCTCAAGCATGAGCATATCG...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCAGTTCACAGGAAGCCTaGCATTCCCCTCTATTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACSSQEA*HSPLLA
Trigger: GGCCAATAGAGGGGAATGTCAGGCTTCCTGTGAACT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTAGACAGCCGTGGGGCTaGAATGTTGGCGTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPRQPWG*NVGVWK
Trigger: TTTCCAGACGCCAACATTTCAGCCCCACGGCTGTCT...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAAAACAATGTACCCATaGACCAACCGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSKTMYP*TNRLFL
Trigger: CAGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTAAAACAATGTACCCATaGACCAACCGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCKTMYP*TNRLFL
Trigger: CAGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTT...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGGTGAGTGCTACAAGCTaGATAGGGATAATATCCTGC +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLVSATS*IGIISC
Trigger: GCAGGATATTATCCCTATTCAGCTTGTAGCACTCAC...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAGGACAGAGAAGGCAGTaGTGTGTCTTCTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLGQRRQ*CVFSKQ
Trigger: CTGTTTCGAGAAGACACATCACTGCCTTCTCTGTCC...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGTCCCACACTCTCTGGGTCCAGGCACAAAGCTATCCTCCGTTGTTCTGATCTGCAGACTTGTTCCCGCTaGCCCGGTAGATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SPTLSGSRHKAILRCSDLQTCSR*PGRCLP
Trigger: CGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTG...CAGATCAGAACAACGGAGGATAGCTTTGTGCCTGGACCCAGAGAGTGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGGTTCTCGCTGGTCATaGGATTCACCTTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPGSRWS*DSPCCC
Trigger: ACAACAACAAGGTGAATCTCATGACCAGCGAGAACC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACATGTGGGGGCGACGGCTaGCTTGTGACAGGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATCGGDG*LVTGVE
Trigger: TTCCACGCCTGTCACAAGTCAGCCGTCGCCCCCACA...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGACCCTCTGTCCACCGTaGCAAAGACAGACACATCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRTLCPP*QRQTHP
Trigger: AGGATGTGTCTGTCTTTGTCACGGTGGACAGAGGGT...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTGTGGTTTTTCACAATaGGACTCACCAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPCGFSQ*DSPATH
Trigger: ATGAGTGGCTGGTGAGTCGCATTGTGAAAAACCACA...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTGCTGTATTAAGCTATaGAGAGTCTCTCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPCCIKL*RVSPLV
Trigger: CACCAGTGGAGAGACTCTGCATAGCTTAATACAGCA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTCAATCCGCTTCTTGTaGAGTCCGATTGGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLSIRFL*SPIGSS
Trigger: TGAACTACCAATCGGACTGCACAAGAAGCGGATTGA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCAAGATCTCAAGTTTATaGTGGGGTTGGCTACAGGGG +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFKISSL*WGWLQG
Trigger: CCCCTGTAGCCAACCCCAGCATAAACTTGAGATCTT...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTATCACGATGGAAACCTTaGGCCCTCGCTCTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVSRWKP*ALALES
Trigger: GCTCTCTAGAGCGAGGGCGCAAGGTTTCCATCGTGA...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCTGTACAGCACTGGCTTaGTCACGATGGAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPCTALA*SRWKPC
Trigger: GCAAGGTTTCCATCGTGAGCAAGCCAGTGCTGTACA...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGTTACTCTCCCAGGTTaGCTTTGTGATGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILVTLPG*LCDGWP
Trigger: CGGCCATCCATCACAAAGGCAACCTGGGAGAGTAAC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGTTACACCTCAGAGCCACGAGTCGTTGATTTTGTGTaGTTCCACCAAGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: RRCPPREGAHPRYTSEPRVVDFV*FHQVDL
Trigger: CAGATCGACTTGGTGGAAGCACACAAAATCAACGAC...TCGTGGCTCTGAGGTGTAACGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTAGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGGGACGTGGCTTTTGTaGTCACACAAAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKGTWLL*SHKRGG
Trigger: GCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCC...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGTAGAAACAGCTTCTTaGCTTTCTGAGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCVETAS*LSESLP
Trigger: TGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTAC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGTGGGGCTGAAATGTTaGCGTCTGGAAAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRVGLKC*RLERVH
Trigger: GTGAACTCTTTCCAGACGCCAACATTTCAGCCCCAC...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGCGCCCCCACCGGACCCGCGACAGAAACTGCCCCCTTCCTGGGCCACTTTCTATGCTAAAGGAGGAATaGTATGAAAGAACAGACAGT +
Preference number: 4 (lower is better)
Translates to: PRPHRTRDRNCPLPGPLSMLKEE*YERTDS
Trigger: ACTGTCTGTTCTTTCATACCATTCCTCCTTTAGCAT...AGAAAGTGGCCCAGGAAGGGGGCAGTTTCTGTCGCGGGTCCGGTGGGGGCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCAGGCTTTGGTTTGACTaGCGGAGGTACTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSRLWFD*RRYFVV
Trigger: AACAACAAAGTACCTCCGCCAGTCAAACCAAAGCCT...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGTGATGATTTTGCCTTaGGTGCTGTCATGGGGCACG +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKVMILP*VLSWGT
Trigger: CGTGCCCCATGACAGCACCCAAGGCAAAATCATCAC...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCCTCGCTCTAGAGAGCTaGTGTCCATTTCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPLALES*CPFHCQ
Trigger: CTGACAGTGAAATGGACACCAGCTCTCTAGAGCGAG...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGCCGTGCTCAGTCCTGTaGCTTCAATGTACTCAATAC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREPCSVL*LQCTQY
Trigger: GTATTGAGTACATTGAAGCCACAGGACTGAGCACGG...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGAGAAAAAGCTCTTCATaGCACCAGCCACGGTATTCA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPRKSSS*HQPRYS
Trigger: TGAATACCGTGGCTGGTGCCATGAAGAGCTTTTTCT...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TTGGTTTTGTTCAAGGCCAAATGCCACCCCGTCAGAGAGAGGACCGGTTCTCCTTGGCAGCCCAGCCGATaGTACCATTGGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLFKAKCHPVRERTGSPWQPSR*YHWLVL
Trigger: GAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCA...AGGAGAACCGGTCCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACAGAGGGAGGGCACTaGAGCCATTGCCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGTEGGH*SHCLPS
Trigger: ACTAGGCAGGCAATGGCTCCAGTGCCCTCCCTCTGT...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATGTGCAGATGGAAGGTaGGAAGAGACAGACCAACAG +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRCADGR*EETDQQ
Trigger: CTGTTGGTCTGTCTCTTCCCACCTTCCATCTGCACA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCGCTGTACCCTTACCTTaGGGGTGTGTGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTAVPLP*GCVQME
Trigger: TTCCATCTGCACACACCCCCAAGGTAAGGGTACAGC...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACAGCTCCAGGCATCCTaGTTTTGCTGCCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPQLQAS*FCCHKD
Trigger: GTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTAATGCAAGTGCCCATTTaGGCTGCACGCTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLMQVPI*AARFPD
Trigger: GTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCAT...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACCCACGTCCCCATTCTaGACAAGCCAACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATPTSPF*TSQRPP
Trigger: GGGAGGGCGTTGGCTTGTCCAGAATGGGGACGTGGG...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TTGGTTTTGTTCAAGGCCAAATGCCACCCCGTCAGAGAGAGGACCGGTTCTCCTCGTGTCCAGAATGCCTaGTGGCCTGCGGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LVLFKAKCHPVRERTGSPRVQNA*WPAGVF
Trigger: AAAGACCCCCGCAGGCCACCAGGCATTCTGGACACG...AGGAGAACCGGTCCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAAAACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTTGCGAAACAGAATTTTaGGCACACAGCCAGACTACT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCCETEF*AHSQTT
Trigger: AGTAGTCTGGCTGTGTGCCCAAAATTCTGTTTCGCA...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTTAGTGGGGGTGGGCTaGACATGCAGCAAAAATGCC +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTLVGVG*TCSKNA
Trigger: GGCATTTTTGCTGCATGTCCAGCCCACCCCCACTAA...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672722.1
3UTR CAA 72 bp GGCCGCACATACATCTGTGGAATCGGGCCAGGTGGCTaGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRTYICGIGPGG*GRGFCAHTKEV
Trigger: CACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAGATGTATGTGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGCATGAGTTTTTCAGCTaGTGCAAGCTTGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRHEFFS*CKLGRS
Trigger: GCTGCGACCAAGCTTGCATCAGCTGAAAAACTCATG...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGATTGGAGACAAACTTaGGCTGGTCATCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFDWRQT*AGHQSS
Trigger: GGAACTTTGATGACCAGCTCAAGTTTGTCTCCAATC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTTACATTGGATCTCGCTaGGGTCTCCACAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPYIGSR*GLHNLE
Trigger: CTCCAGGTTGTGGAGACCTCAGCGAGATCCAATGTA...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGTCCATGTTGTCAATGTaGCTGGTGGCATCCCATGGG +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWSMLSM*LVASHG
Trigger: CCCATGGGATGCCACCAGTCACATTGACAACATGGA...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTGAGAGTGAATTTTTCTaGTTCCGGTCAGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPESEFF*FRSDGR
Trigger: CCGGCCGTCTGACCGGAATCAGAAAAATTCACTCTC...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGTTACAGGTTTGGGACTaGAGGACAGGAAAAAGTATG +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLLQVWD*RTGKSM
Trigger: CATACTTTTTCCTGTCCTTCAGTCCCAAACCTGTAA...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGAAGGCCGGCCTGCCACGACTGGCCATGCCCCTCAAACGACCGAGATGTCCTTTACAGGTTTGGGACTaGAGGACAGGAAAAAGTATG +
Preference number: 4 (lower is better)
Translates to: LKAGLPRLAMPLKRPRCPLQVWD*RTGKSM
Trigger: CATACTTTTTCCTGTCCTTCAGTCCCAAACCTGTAA...AGGACATCTCGGTCGTTTGAGGGGCATGGCCAGTCGTGGCAGGCCGGCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGAAAAACAATGTACCCATaGACCAACCGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGKTMYP*TNRLFL
Trigger: CAGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTT...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGTGAGTGCTACAAGCTaGATAGGGATAATATCCTGC +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREVSATS*IGIISC
Trigger: GCAGGATATTATCCCTATTCAGCTTGTAGCACTCAC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACTTCCGTCAATTTCTTaGGCAATCTCCTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILLPSIS*AISSPS
Trigger: TGAGGGGGAGGAGATTGCTCAAGAAATTGACGGAAG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTCTGACCTTGTTTAGGTaGGAGATGACATACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCLTLFR*EMTYLK
Trigger: CTTCAAGTATGTCATCTCTCACCTAAACAAGGTCAG...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKTRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACCTCCATGGCTGGGATaGAACGATTCCACTTCAACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPPPWLG*NDSTST
Trigger: TGTTGAAGTGGAATCGTTTCATCCCAGCCATGGAGG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAAATTACGTGAGGAGCTaGCCAGGTGAGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILNYVRS*PGEHNL
Trigger: GAGGTTATGCTCACCTGGTCAGCTCCTCACGTAATT...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGTAAATGTGTGCCGTaGCACCCAGTATGCGACACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPSKCVP*HPVCDT
Trigger: TGTGTCGCATACTGGGTGTCACGGCACACATTTACT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGGCAGCAGGAGCTGAGTaGGGCACAGGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKAAGAE*GTGMPP
Trigger: TGGGGGCATCCCTGTGCCTCACTCAGCTCCTGCTGC...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATATTCTGGAGAGGCCTaGATCTTTCGGCTGACACTC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILYSGEA*IFRLTL
Trigger: GAGTGTCAGCCGAAAGATGCAGGCCTCTCCAGAATA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGCGAGAACTAATCAAGTaGTCAATCTTAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPRELIK*SILAST
Trigger: TGTGGACGCTAAGATTGAGCACTTGATTAGTTCTCG...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCAAGATCTCAAGTTTATaGTGGGGTTGGCTACAGGGG +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPKISSL*WGWLQG
Trigger: CCCCTGTAGCCAACCCCAGCATAAACTTGAGATCTT...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTGGTAGATGCCTTCCGTaGTCAGTCCTGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPGRCLP*SVLWLQ
Trigger: TTGAAGCCACAGGACTGAGCACGGAAGGCATCTACC...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGCGTAAAGTCTTTCTCTaGCAGGTCCAGGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRRKVFL*QVQVVV
Trigger: GACCACAACCTGGACCTGGCAGAGAAAGACTTTACG...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCCGTAAAGTCTTTCTCTaGCAGGTCCAGGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACRKVFL*QVQVVV
Trigger: GACCACAACCTGGACCTGGCAGAGAAAGACTTTACG...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATCCACCAAGTCGATCTaGATGTTATACGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSTKSI*MLYGTR
Trigger: CCTGGTCCCGTATAACATGCAGATCGACTTGGTGGA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACGTGAGGTCGTTGATTTTGTGTaGTTCCACCAAGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: TGTAQGTTMLSLHPQLREVVDFV*FHQVDL
Trigger: CAGATCGACTTGGTGGAAGCACACAAAATCAACGAC...CTCACGTAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGCCCACCCCACGCACATaGTCAATTAGTGTTTCTATC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGPTPRT*SISVSI
Trigger: GATAGAAACACTAATTGAGCATGTGCGTGGGGTGGG...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAGCCACAGCCCAGCCATaGAAGTTTGAGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATATAQP*KFEVLG
Trigger: CCCCAGCACCTCAAACTTGCATGGCTGGGCTGTGGC...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGGTGTGTGTGTGTGTGTaGGTGTCCAGAATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWVCVCV*VSRMPG
Trigger: ACCAGGCATTCTGGACACGCACACACACACACACAC...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCGAGATGTCCTCTAGTCCCTCAGCCCGGAGCAGCAGATGAGAGGCTGAAGTTAATCGTCGACACATCCTaGCACGATCAGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PRCPLVPQPGAADERLKLIVDTS*HDQPLL
Trigger: CAGAAGTGGCTGATCGTGGCAGGATGTGTCGACGAT...TAACTTCAGCCTCTCATCTGCTGCTCCGGGCTGAGGGACTAGAGGACATCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCCAGCAGCTTTCCGTCTaGCATTTGTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFQQLSV*HLFLLK
Trigger: TTTGAGCAGAAACAAATGCCAGACGGAAAGCTGCTG...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATCATGCTTGAGGCGGTaGATGTGCTGTAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSCLRR*MCCRNS
Trigger: GCTGTTTCTACAGCACATCCACCGCCTCAAGCATGA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCACTCAGCTTCTCTAAGTaGGCCTCGTATAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPLSFSK*ASYSCS
Trigger: AGAGCAGCTATACGAGGCCCACTTAGAGAAGCTGAG...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GTGGCCTACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGCATGTCTCCTTTGTTaGGTGGTACACAAAATGAAT +
Preference number: 4 (lower is better)
Translates to: VAYTFPRRPPAGLYPYLGACLLC*VVHKMN
Trigger: ATTCATTTTGTGTACCACCCAACAAAGGAGACATGC...CCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGTAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGGAGCTCGAATCTCATTaGCCAACTCTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGELESH*PTLGQG
Trigger: GCCTTGCCCGAGAGTTGGCCAATGAGATTCGAGCTC...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGAGCCAGGATCAGTCAGGCTTTGGTTTGACTaGCGGAGGTACTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: HATQPWVFPLQPSEPGSVRLWFD*RRYFVV
Trigger: AACAACAAAGTACCTCCGCCAGTCAAACCAAAGCCT...GACTGATCCTGGCTCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAATGGACAGGAGGCTTTaGTTTGACTGGCGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVMDRRL*FDWRRY
Trigger: GTACCTCCGCCAGTCAAACCAAAGCCTCCTGTCCAT...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCTTGGGTGCTGTCATaGGGCACGGAGTATATGTTT +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPWVLS*GTEYMF
Trigger: AAACATATACTCCGTGCCCCATGACAGCACCCAAGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTACCGCTGCCGTTGGACTaGGCTTTGTTGATATTCCGA +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVPLPLD*ALLIFR
Trigger: TCGGAATATCAACAAAGCCCAGTCCAACGGCAGCGG...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAAGTTCAGTCCTCAAATaGGTCCAAGCCAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSSVLK*VQASSG
Trigger: ACCTGAGCTGGCTTGGACCCATTTGAGGACTGAACT...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAGAGGCGGGCACAGAGTaGAATCTTGAGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVEAGTE*NLEVCS
Trigger: ACTACAGACCTCAAGATTCCACTCTGTGCCCGCCTC...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGGGTGGCCTCCATGGCTaGGATGAAACGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWGGLHG*DETIPL
Trigger: AAGTGGAATCGTTTCATCCCAGCCATGGAGGCCACC...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTCCAAGCACCTTCGTTaGCCATTGAGAACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTSKHLR*PLRTGD
Trigger: GTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGA...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGAACACGCCTGAACCCTaGGTTTGTTCTCCGATTTGT +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPANTPEP*VCSPIC
Trigger: ACAAATCGGAGAACAAACCCAGGGTTCAGGCGTGTT...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAAGGTGGCTTGGGACGTaGCTTTTGTGCTCACACAAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPRWLGT*LLCSHK
Trigger: TTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCT...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TTGGTTTTGTTCAAGGCCAAATGCCACCCCGTCAGAGAGAGGACCGGTTCTCCTACAAGAGGAACCCTGTaGCTTCCTGTGCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVLFKAKCHPVRERTGSPTRGTL*LPVHGG
Trigger: GCCCCCATGCACAGGAAGCCACAGGGTTCCTCTTGT...AGGAGAACCGGTCCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTGTGTCTGCGCTCTCGCTaGGCAGGGGTGGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSKGGKTCKVRCFQAPSLCLRSR*AGVAAP
Trigger: TGGGGCAGCCACCCCTGCCCAGCGAGAGCGCAGACA...CAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGGTCTTTACCAGCCAAGAATTCTAAGTaGATTCACGAGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVSRMPGGLRGSLPAKNSK*IHEPRH
Trigger: GTGGCGTGGCTCGTGAATCCACTTAGAATTCTTGGC...TGGTAAAGACCCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp AGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCAAGGAGGCCGCTGTTGTATACCAGTATaGTCACTGTTCACCACCTCT +
Preference number: 4 (lower is better)
Translates to: SRYLVVAEPWPTRSQGGRCCIPV*SLFTTS
Trigger: AGAGGTGGTGAACAGTGACCATACTGGTATACAACA...GCGGCCTCCTTGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672722.1
3UTR CAA 72 bp GCAAGGTTAGGTGTTTCCAAGCACCTTCGTTGGCCATaGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ARLGVSKHLRWP*RTGDSEPAVPR
Trigger: TCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCAACGAAGGTGCTTGGAAACACCTAACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
3UTR CAA 72 bp CTGTGGAATCGGGCCAGGTGGCTTGGGACGTGGCTTTaGTGCTCACACAAAAGAGGTGGCAGTGTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LWNRARWLGTWL*CSHKRGGSVSS
Trigger: TGAGCTAACACTGCCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGAAAGTGGTCATTATTaGCCACTCGCCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRESGHY*PLALQS
Trigger: ACTTTGGAGGGCGAGTGGTCAATAATGACCACTTTC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCTGTGTGCCTCCCTCATGAGTTTTTCAGCTaGTGCAAGCTTGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ILVLLPQRRGSAPPVCLPHEFFS*CKLGRS
Trigger: GCTGCGACCAAGCTTGCATCAGCTGAAAAACTCATG...AGGGAGGCACACAGGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTCAGTGCAAAAGTACATaGGTTTTTCAGCTGATGCAA +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHAQCKST*VFQLMQ
Trigger: TTGCATCAGCTGAAAAACTCATGTACTTTTGCACTG...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTAGATTGGAGACAAACTTaGGCTGGTCATCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLDWRQT*AGHQSS
Trigger: GGAACTTTGATGACCAGCTCAAGTTTGTCTCCAATC...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGTTGCACTAAGGTGCTaGAAGCCAAGTCCACGTTTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRVALRC*KPSPRL
Trigger: TAAACGTGGACTTGGCTTTCAGCACCTTAGTGCAAC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGCCATTGAGAACTGGAGACAGTGAGCCAGCCGTCCCCAGAGGGAGCTCGGGATTACAGGTTTGGGACTaGAGGACAGGAAAAAGTATG +
Preference number: 4 (lower is better)
Translates to: WPLRTGDSEPAVPRGSSGLQVWD*RTGKSM
Trigger: CATACTTTTTCCTGTCCTTCAGTCCCAAACCTGTAA...TCCCGAGCTCCCTCTGGGGACGGCTGGCTCACTGTCTCCAGTTCTCAATGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGGATTCACGAGCCACGCCACCCAGCCTTGGGTCTTCCCTCTTCAGCCGTCAGATACAGGGGATGCTTGTaGACCTTCCGTCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: WIHEPRHPALGLPSSAVRYRGCL*TFRQFL
Trigger: AAGAAATTGACGGAAGGTTCACAAGCATCCCCTGTA...TCTGACGGCTGAAGAGGGAAGACCCAAGGCTGGGTGGCGTGGCTCGTGAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGGTACAGGGGATGCTTGTaGACCTTCCGTCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVRVQNAWWPAGYRGCL*TFRQFL
Trigger: AAGAAATTGACGGAAGGTTCACAAGCATCCCCTGTA...CCCCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTGCATTATCGTACATATaGGTAGCCTCGATTATGTTC +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCALSYI*VASIMF
Trigger: GAACATAATCGAGGCTACTCATATGTACGATAATGC...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CACTTTCTGACCTGGACACAGACGATGTCCTCCGAGGGAGGGAGCCCACCCCCGGCATTATCGTACATATaGGTAGCCTCGATTATGTTC +
Preference number: 4 (lower is better)
Translates to: HFLTWTQTMSSEGGSPPPALSYI*VASIMF
Trigger: GAACATAATCGAGGCTACTCATATGTACGATAATGC...CGGGGGTGGGCTCCCTCCCTCGGAGGACATCGTCTGTGTCCAGGTCAGAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGCTGTTTCGTATGGAATaGCAGCATTGTCCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQLFRME*QHCPLY
Trigger: ATAAAGGGGACAATGCTGTCATTCCATACGAAACAG...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGCTGACCTTGTTTAGGTaGGAGATGACATACTTGAAG +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQLTLFR*EMTYLK
Trigger: CTTCAAGTATGTCATCTCTCACCTAAACAAGGTCAG...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGGTTCTCGCTGGTCATaGGATTCACCTTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILGSRWS*DSPCCC
Trigger: ACAACAACAAGGTGAATCTCATGACCAGCGAGAACC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp GAAAGACGGGGACAATGCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACAAGCGTGTGTTCGGCTTaGAGCTGGGAGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ERRGQCRVNVCRDTQYATSVCSA*SWEGSS
Trigger: ACTGCTTCCCTCCCAGCTTCAAGCCGAACACACGCT...TGTCGCATACTGGGTGTCACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TTGGTTTTGTTCAAGGCCAAATGCCACCCCGTCAGAGAGAGGACCGGTTCTCCTCTCCCACTGAGGTCTTaGGAAGGTAATGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVLFKAKCHPVRERTGSPLPLRS*EGNGES
Trigger: GCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAG...AGGAGAACCGGTCCTCTCTCTGACGGGGTGGCATTTGGCCTTGAACAAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp TCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACCTTCGTTGACCCGGAGGCTGGTGTaGGCAGCTACGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSKGGKTCKVRCFQAPSLTRRLV*AATWGG
Trigger: ACCACCCCACGTAGCTGCTCACACCAGCCTCCGGGT...CAACGAAGGTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp CCCTGTTCCTCCCCAAACGCTAGGCGATGGGAAAGACGGGGACAATGCAGAGTAAATTACGTGAGGAGCTaGCCAGGTGAGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: PCSSPNARRWERRGQCRVNYVRS*PGEHNL
Trigger: GAGGTTATGCTCACCTGGTCAGCTCCTCACGTAATT...TACTCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGGAGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACCCTGCCCACCTTGGCTaGCAAGGCGCTGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHPAHLG*QGAALG
Trigger: TCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGG...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACGCCCGGAGCAGCAGATaGGAGGCTGAAGTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHARSSR*EAEVSG
Trigger: CCCGCTAACTTCAGCCTCTCATCTGCTGCTCCGGGC...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR TCA 90 bp ATTTGTGTTCCTCAAAAGGCGGTAAAACTTGCAAGGTTAGGTGTTTCCAAGCACTCCCTGACCGGACGCTaGAGGCCGGCCTGCCACGAC +
Preference number: 4 (lower is better)
Translates to: ICVPQKAVKLARLGVSKHSLTGR*RPACHD
Trigger: GTCGTGGCAGGCCGGCCTTCAGCGTCCGGTCAGGGA...GTGCTTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTTTGAGGAACACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGGGCGCACGAAGCGGTTaGACAAACAAGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWGARSG*TNKTFQ
Trigger: TTGGAAAGTCTTGTTTGTGCAACCGCTTCGTGCGCC...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTGTCTGCTCCACAATGTaGATCTTACATTCCACACAA +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPVCSTM*ILHSTQ
Trigger: TTGTGTGGAATGTAAGATGCACATTGTGGAGCAGAC...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGCGCCCTCAGCAGGTACCTAGTGGTGGCAGAGCCGTGGCCTACACGTTCCCACCTGGAGGTTCTTTTTaGTTAAGGCAAAAGTATGTG +
Preference number: 4 (lower is better)
Translates to: QRPQQVPSGGRAVAYTFPPGGSF*LRQKYV
Trigger: CACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGG...TGGGAACGTGTAGGCCACGGCTCTGCCACCACTAGGTACCTGCTGAGGGCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGCCTGCGGGGGTCTTTACCAAGGGGATGCTGGCTTGACCCAGGCCTCCTTTCCCTTTTATCAATGAGTTaGACTAAGGTGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLRGSLPRGCWLDPGLLSLLSMS*TKVLKA
Trigger: GGCTTTCAGCACCTTAGTGCAACTCATTGATAAAAG...GGAAAGGAGGCCTGGGTCAAGCCAGCATCCCCTTGGTAAAGACCCCCGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTCTTTTATCAATGAGTTaGACTAAGGTGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHALLSMS*TKVLKA
Trigger: GGCTTTCAGCACCTTAGTGCAACTCATTGATAAAAG...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACACGTTCCCAAGGAGGCCGCCAGCCGGGCTGTACCCTTACCTTGGGGGTGTGTCTCATACTTGTCTTTTaGTGTAGCTATCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: TRSQGGRQPGCTLTLGVCLILVF*CSYLLT
Trigger: AGTCAGCAGATAGCTACAGCAAAAGACAAGTATGAG...ACACACCCCCAAGGTAAGGGTACAGCCCGGCTGGCGGCCTCCTTGGGAACGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGCTCATACTTGTCTTTTaGTGTAGCTATCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTELILVF*CSYLLT
Trigger: AGTCAGCAGATAGCTACAGCAAAAGACAAGTATGAG...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGTGTGGTTTTTCACAATaGGACTCACCAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPACGFSQ*DSPATH
Trigger: ATGAGTGGCTGGTGAGTCGCATTGTGAAAAACCACA...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCTTGAGGCGGTGGATGTaGTGTAGAAACAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACLRRWM*CRNSFL
Trigger: CAAGAAGCTGTTTCTACAGCACATCCACCGCCTCAA...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTATGCTGTATTAAGCTATaGAGAGTCTCTCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLCCIKL*RVSPLV
Trigger: CACCAGTGGAGAGACTCTGCATAGCTTAATACAGCA...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCAAGATCTCAAGTTTATaGTGGGGTTGGCTACAGGGG +
Preference number: 4 (lower is better)
Translates to: RGGSVSSSSEGDWAAFACKISSL*WGWLQG
Trigger: CCCCTGTAGCCAACCCCAGCATAAACTTGAGATCTT...GCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGTCGTTGATTTTGTGTaGTTCCACCAAGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAVVDFV*FHQVDL
Trigger: CAGATCGACTTGGTGGAAGCACACAAAATCAACGAC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp ACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTAAGAAGAAGGGGCACTaGTGGATAAAGAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: TGDLATRPKWVSGTPAGPKKKGH*WIKSSM
Trigger: CATTGAACTCTTTATCCAGCAGTGCCCCTTCTTCTT...AGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGAAGAAGAAGGGGCACTaGTGGATAAAGAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQKKKGH*WIKSSM
Trigger: CATTGAACTCTTTATCCAGCAGTGCCCCTTCTTCTT...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGGGCCAGGCACAGCTCCACCAGAAGAGACAAAAATTCATCATCCAACATTCACAAGCCAGCTCAGGTCTaGAGCGCCAGGCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RARHSSTRRDKNSSSNIHKPAQV*SARPRV
Trigger: TACCCTGGGCCTGGCGCTGCAGACCTGAGCTGGCTT...GTGAATGTTGGATGATGAATTTTTGTCTCTTCTGGTGGAGCTGTGCCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGTCCCACACTCTCTGGGTCCAGGCACAAAGCTATCCTCCGTTGTTCTGATCTGGTTCTCTTCAGGGGTTaGCAGCCCCACCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SPTLSGSRHKAILRCSDLVLFRG*QPHPES
Trigger: AGATTCAGGGTGGGGCTGGCAACCCCTGAAGAGAAC...CAGATCAGAACAACGGAGGATAGCTTTGTGCCTGGACCCAGAGAGTGTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATCCTATTTCTTAAAGTaGAACGAGCCCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILSYFLK*NEPQGL
Trigger: CAGCCCTTGGGGCTCGTTGCACTTTAAGAAATAGGA...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp AGCTGCCACAGTCCCTGCCTGCCCACCTTGGCTGACAAGGCGCTGCATTGGGAGAAAGGCGGTAAAACTTaGAAGGTTAGGTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCHSPCLPTLADKALHWEKGGKT*KVRCFQ
Trigger: TTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTT...CTCCCAATGCAGCGCCTTGTCAGCCAAGGTGGGCAGGCAGGGACTGTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GTGGCTCCCATGCAAGTGCCCATTTGGGCTGCACGCTTCCCTGACCGGACGCTGAAAGGCGGTAAAACTTaGAAGGTTAGGTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VAPMQVPIWAARFPDRTLKGGKT*KVRCFQ
Trigger: TTGGAAACACCTAACCTTGCAAGTTTTACCGCCTTT...CAGCGTCCGGTCAGGGAAGCGTGCAGCCCAAATGGGCACTTGCATGGGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGTTTGGGAACGTTTCTaGCAACCTCAGCTAAAACGA +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAVWERF*QPQLKR
Trigger: TCGTTTTAGCTGAGGTTGGCAGAAACGTTCCCAAAC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTAGAAAGACGGGGACAATaGAGAGTAAATGTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILERRGQ*RVNVCR
Trigger: ACGGCACACATTTACTCTGCATTGTCCCCGTCTTTC...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR GCA 90 bp GGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGACCCCAGCAGGCCCTCAGGGTCTTCACTTTTGCTaGGAAACAGAATTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GDLATRPKWVSGTPAGPQGLHFC*ETEFWA
Trigger: TGCCCAAAATTCTGTTTCGCAGCAAAAGTGAAGACC...CTGAGGGCCTGCTGGGGTCCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR GCA 90 bp CTGGGCTGCTTTTGCCTGCGTTCACACAGGGACGGCCCAGGGCACCACCATGCTACAGGTCTTCACTTTTaGTGCGAAACAGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: LGCFCLRSHRDGPGHHHATGLHF*CETEFW
Trigger: CCAAAATTCTGTTTCGCAGCAAAAGTGAAGACCTGT...AGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAACGCAGGCAAAAGCAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GTTCACACAGGGACGGCCCAGGGCACCACCATGCTTTCCCTCCACCCCCAATTACAGCAGCTTTCCGTCTaGCATTTGTTTCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VHTGTAQGTTMLSLHPQLQQLSV*HLFLLK
Trigger: TTTGAGCAGAAACAAATGCCAGACGGAAAGCTGCTG...TAATTGGGGGTGGAGGGAAAGCATGGTGGTGCCCTGGGCCGTCCCTGTGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCAGGGTACCTGGCAGCCCAGCCGATGGTACCATTGGCTGGTGCTCCCACTGAGGAGACAAACTTGAGCTaGTCATCAAAGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: PGYLAAQPMVPLAGAPTEETNLS*SSKFLF
Trigger: GAATAGGAACTTTGATGACCAGCTCAAGTTTGTCTC...CTCAGTGGGAGCACCAGCCAATGGTACCATCGGCTGGGCTGCCAGGTACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGGTGGTGGATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGAGTCCACGTTTACATTaGATCTCGCTGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WWWMICRHSASGSAKTRKSPRLH*ISLRSP
Trigger: TGGAGACCTCAGCGAGATCCAATGTAAACGTGGACT...CTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATCCACCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GAGGTGGCAGTGTTAGCTCAAGCAGTGAGGGGGACTGGGCTGCTTTTGCCTGCGGTAGAAACAGCTTCTTaGCTTTCTGAGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EVAVLAQAVRGTGLLLPAVETAS*LSESLP
Trigger: TGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTAC...CGCAGGCAAAAGCAGCCCAGTCCCCCTCACTGCTTGAGCTAACACTGCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TCCTGGCCACCGCACCCTACTTTTTCTAGCCGGCGCCCCCAAAGCAGTGGCTTCGCATCACGCTCTGCTTaGAGCTTTTGTAATGCTTTA +
Preference number: 4 (lower is better)
Translates to: SWPPHPTFSSRRPQSSGFASRSA*SFCNAL
Trigger: TAAAGCATTACAAAAGCTCCAAGCAGAGCGTGATGC...GAAGCCACTGCTTTGGGGGCGCCGGCTAGAAAAAGTAGGGTGCGGTGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTCCAGAATGCCTGGTGGCCTGCGGGACATTCCCCTCTATTaGCCTCAGGGAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVSRMPGGLRDIPLY*PQGKLI
Trigger: TATGAGCTTTCCCTGAGGCCAATAGAGGGGAATGTC...CCGCAGGCCACCAGGCATTCTGGACACGCACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GAATCGGGCCAGGTGGCTTGGGACGTGGCTTTTGTGCTCACACAAAAGAGGTGGAGTTTATGCTGGGGTTaGCTACAGGGGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ESGQVAWDVAFVLTQKRWSLCWG*LQGMLV
Trigger: CACAAGCATCCCCTGTAGCCAACCCCAGCATAAACT...CCACCTCTTTTGTGTGAGCACAAAAGCCACGTCCCAAGCCACCTGGCCCGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CACAGCTCCAGGCATCCTGGTTTTGCTGCCACAAAGACGAGGGTCAGCTCCACCATCTCAAGTTTATGCTaGGGTTGGCTACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: HSSRHPGFAATKTRVSSTISSLC*GWLQGM
Trigger: CATCCCCTGTAGCCAACCCCAGCATAAACTTGAGAT...GGTGGAGCTGACCCTCGTCTTTGTGGCAGCAAAACCAGGATGCCTGGAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CCTCTTCTTGGGAAAACGGGGGATCTAGCGACTAGACCTAAGTGGGTGAGTGGGATGGACAGGAGGCTTTaGTTTGACTGGCGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PLLGKTGDLATRPKWVSGMDRRL*FDWRRY
Trigger: GTACCTCCGCCAGTCAAACCAAAGCCTCCTGTCCAT...CCCACTCACCCACTTAGGTCTAGTCGCTAGATCCCCCGTTTTCCCAAGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp CAGACGCCCGGGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTACCGTGCTCAGTCCTGTaGCTTCAATGTACTCAATAC +
Preference number: 4 (lower is better)
Translates to: QTPGKGVHQAPWNTPQILPCSVL*LQCTQY
Trigger: GTATTGAGTACATTGAAGCCACAGGACTGAGCACGG...TAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCCCGGGCGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404338.8
ENST00000614079.1
ENST00000672722.1
CDS-3UTR CCA 90 bp GATGATATGCAGGCACAGCGCCTCTGGGTCAGCGAAGACCAGGAAGGATGCCCCAGAAAAAGCTCTTCATaGCACCAGCCACGGTATTCA +
Preference number: 4 (lower is better)
Translates to: DDMQAQRLWVSEDQEGCPRKSSS*HQPRYS
Trigger: TGAATACCGTGGCTGGTGCCATGAAGAGCTTTTTCT...GGGGCATCCTTCCTGGTCTTCGCTGACCCAGAGGCGCTGTGCCTGCATATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404338.8
ENST00000672722.1
CDS-3UTR CCA 90 bp GGAAAGGTGTCCATCAGGCCCCCTGGAATACACCACAGATCCTATTTCTTAAAGGGGCAGTGGGAAGGCTaGGCTAGGGTGGTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GKVSIRPPGIHHRSYFLKGQWEG*ARVVVD
Trigger: ATCCACCACCACCCTAGCCCAGCCTTCCCACTGCCC...CTTTAAGAAATAGGATCTGTGGTGTATTCCAGGGGGCCTGATGGACACCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts: