RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP33 (Homo sapiens)

Ensembl gene IDs: ENSG00000004777

Ensembl transcript IDs: ENST00000007510.8, ENST00000221905.1, ENST00000314737.9, ENST00000378944.9, ENST00000587447.3, ENST00000587984.1, ENST00000588248.6, ENST00000589133.5, ENST00000590893.5, ENST00000591438.1, ENST00000593034.5, ENST00000601474.5

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAACAAAACAAGGGATTTaGTTGGGCCAAGATCCAGTG +
Preference number: 2 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSTKQGI*LGQDPV
Trigger: CACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACAAAACAAGGGATTTaGTTGGGCCAAGATCCAGTG +
Preference number: 2 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTKQGI*LGQDPV
Trigger: CACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACAAAACAAGGGATTTaGTTGGGCCAAGATCCAGTG +
Preference number: 2 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTKQGI*LGQDPV
Trigger: CACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR TCA 72 bp CACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTaGCAGTGTCTCCAGGTACTGCAGCAGCAGTGGCAC +
Preference number: 3 (lower is better)
Translates to: HRPAVEVTVHQS*QCLQVLQQQWH
Trigger: GTGCCACTGCTGCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
3UTR-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAAACAAGGGATTTGGTaGGGCCAAGATCCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRKQGIW*GQDPVR
Trigger: CCTCACTGGATCTTGGCCCAACCAAATCCCTTGTTT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAAACAAGGGATTTGGTaGGGCCAAGATCCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRKQGIW*GQDPVR
Trigger: CCTCACTGGATCTTGGCCCAACCAAATCCCTTGTTT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAAACAAGGGATTTGGTaGGGCCAAGATCCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGKQGIW*GQDPVR
Trigger: CCTCACTGGATCTTGGCCCAACCAAATCCCTTGTTT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTACAAAACAAGGGATTaGGTTGGGCCAAGATCCAGT +
Preference number: 3 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRYKTRD*VGPRSS
Trigger: ACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGTA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
3UTR-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATACAAAACAAGGGATTaGGTTGGGCCAAGATCCAGT +
Preference number: 3 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSYKTRD*VGPRSS
Trigger: ACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGTA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGCTCCATCCAGGTGAGCACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTCGTTCTCGTCGCCGCTaGCGCCGCCATGGCGACACA +
Preference number: 4 (lower is better)
Translates to: SSIQVSTGPQLRLLSTSPRSRRR*RRHGDT
Trigger: TGTGTCGCCATGGCGGCGGCAGCGGCGACGAGAACG...AGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CCA 90 bp CCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCAGCCCGCTGCCGCCGCCATaGCGACACAAAGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQLRLLSTSPDSVSRYCSPLPPP*RHKGEG
Trigger: GCCCTCCCCTTTGTGTCGCCATGGCGGCGGCAGCGG...GCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR TCA 90 bp AGCTCCATCCAGGTGAGCACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGGGGCCTCGAGGAGCTaGGAGCCTCTTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSIQVSTGPQLRLLSTSPGASRS*EPLPRL
Trigger: AAGCCTGGGAAGAGGCTCTCAGCTCCTCGAGGCCCC...AGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR GCA 90 bp ACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACGCAGTGGGTAGAGGCTaGACCGAGCCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGPQLRLLSTSPDSVSRYAVGRG*TEPSPG
Trigger: CCCAGGGGAGGGCTCGGTGCAGCCTCTACCCACTGC...GTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR TCA 90 bp CAGCTCCATCCAGGTGAGCACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCGCACAGGCCCGCAGTTaGGGTTACTGTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: QLHPGEHRPAVEVTVHQSAQARS*GYCPPV
Trigger: GACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGC...GGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CCA 90 bp GGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCTGCTGCGTGCCACCATaGTCGCGTAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPQLRLLSTSPDSVSRYCCCVPP*SRSLLR
Trigger: CCTGAGGAGGCTACGCGACCATGGTGGCACGCAGCA...GCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGCTCCGGCCGGGGCTaGGAGCTGGTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGSGRG*ELVLGW
Trigger: CCACCCCAACACCAGCTCTCAGCCCCGGCCGGAGCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGCTCGGCCACCTGCTaGGCCCGCTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRCSATC*ARSARA
Trigger: GGCCCTGGCTGAGCGGGCTCAGCAGGTGGCCGAGCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCCATCCAGGCTGTCAGTaGTGCGTGCCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: GPQLRLLSTSPDSVSRYCHPGCQ*CVPPWS
Trigger: CGACCATGGTGGCACGCAGCACTGACAGCCTGGATG...GCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCTGGGCTGCTGCCTCTaGCGCATCCCTGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRLGCCL*RIPAPA
Trigger: GGCGGGGGCAGGGATGCGCCAGAGGCAGCAGCCCAG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGTCGGGTCTGCTGCCTaGAGGCTGCGGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRVGSAA*RLRWGT
Trigger: CGTGCCCCACCGCAGCCTTCAGGCAGCAGACCCGAC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGCTCCGGCCGGGGCTaGGAGCTGGTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGSGRG*ELVLGW
Trigger: CCACCCCAACACCAGCTCTCAGCCCCGGCCGGAGCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGCTCGGCCACCTGCTaGGCCCGCTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSCSATC*ARSARA
Trigger: GGCCCTGGCTGAGCGGGCTCAGCAGGTGGCCGAGCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCAGCAGCCCAGGCTGTCAGTGCTaGGTGCCACCATGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: QLRLLSTSPDSVSRYCSSPGCQC*VPPWSR
Trigger: ACGCGACCATGGTGGCACGCAGCACTGACAGCCTGG...GCTGCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGTGGAGGGGCAGCTaGCCGCAAGGGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGWRGS*PQGTWA
Trigger: GGCCCAAGTCCCTTGCGGGCAGCTGCCCCTCCACCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCAGCCGGCCCTGGGTaGGTGCCTGGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPAGPG*VPGLPP
Trigger: TGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCTGCTGCCTGAAGGCTaGGGTGGGGCACGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRLLPEG*GGARVP
Trigger: GGGCACCCGTGCCCCACCGCAGCCTTCAGGCAGCAG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTCGCCGCAGCCTGTaGAGCCTCTGGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGRRSL*SLWRPA
Trigger: GGCTGGCCTCCAGAGGCTGCACAGGCTGCGGCGACC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CAGGTGAGCACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCGGGCCCTTCACGGTCTaGAGACAGCAGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QVSTGPQLRLLSTSPDSVGPFTV*RQQELN
Trigger: ATTCAGCTCCTGCTGTCTCCAGACCGTGAAGGGCCC...GACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCGTCAGCAGGCGGGTaGAGGGGCAGCTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRASAGG*RGSCPQ
Trigger: TTGCGGGCAGCTGCCCCTCCACCCGCCTGCTGACGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGTCCCCAGCCGGCCCTaGGTGCGTGCCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSVPSRP*VRAWAS
Trigger: GGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGAC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCGTCGCTGCTGGAGTaGGGTCGCCGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRASLLE*GRRSLC
Trigger: GCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGACCGAGTGGGCCCTaGGCTCCCCGGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGPSGP*APRSLL
Trigger: CAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCGCTGCCGCCGCCATaGCGACACAAAGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPLPPP*RHKGEG
Trigger: GCCCTCCCCTTTGTGTCGCCATGGCGGCGGCAGCGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACGGGGCGAGATGGCCTaGGGGGTCACCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRGEMA*GVTLGG
Trigger: CCCACCCAGGGTGACCCCCCAGGCCATCTCGCCCCG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCGGGGGTAGGAACCTaGGCAGGGCCTCGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPGVGT*AGPRSP
Trigger: GGGACTCCGAGGCCCTGCCCAGGTTCCTACCCCCGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGCCAGGAACGGCCCTaGCAGGTCACCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGQERP*QVTCTP
Trigger: CGGGGTGCAGGTGACCTGTCAGGGCCGTTCCTGGCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCTCCTTTCCGCAGGTaGGGCCGGGGCCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPPFRR*GRGLGS
Trigger: ACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGAGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGTCGGGTCTGCTGCCTaGAGGCTGCGGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSVGSAA*RLRWGT
Trigger: CGTGCCCCACCGCAGCCTTCAGGCAGCAGACCCGAC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCAGCAGCAGGGGTATaGGATGGGGGCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRAAAGV*DGGAGS
Trigger: GGAGCCTGCGCCCCCATCTCATACCCCTGCTGCTGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGCTCGGCCACCTGCTaGGCCCGCTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGCSATC*ARSARA
Trigger: GGCCCTGGCTGAGCGGGCTCAGCAGGTGGCCGAGCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGGGGGACCGGGATCTaGACGGCTTCGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSWGTGI*TASGVG
Trigger: GCCCACCCCCGAAGCCGTTCAGATCCCGGTCCCCCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCAGTGGGTAGAGGCTaGACCGAGCCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRAVGRG*TEPSPG
Trigger: CCCAGGGGAGGGCTCGGTGCAGCCTCTACCCACTGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCGCAGGATTCCCCGCTaGCGCAGCCGCTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRRIPR*RSRCRE
Trigger: TTCTCGGCAGCGGCTGCGGCAGCGGGGAATCCTGCG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGTGGAGGGGCAGCTaGCCGCAAGGGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGWRGS*PQGTWA
Trigger: GGCCCAAGTCCCTTGCGGGCAGCTGCCCCTCCACCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCGGCCCTGGGTGCGTaGCTGGGCTTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPALGA*LGFLQR
Trigger: ACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCAGCCGGCCCTGGGTaGGTGCCTGGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPAGPG*VPGLPP
Trigger: TGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTGCTGCCTGAAGGCTaGGGTGGGGCACGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLLPEG*GGARVP
Trigger: GGGCACCCGTGCCCCACCGCAGCCTTCAGGCAGCAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCGTTCTCGTCGCCGCTaGCGCCGCCATGGCGACACA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRSRRR*RRHGDT
Trigger: TGTGTCGCCATGGCGGCGGCAGCGGCGACGAGAACG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGGGGACTGGGCTGCTaGCTCTGGCGCATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRWGLGC*LWRIPA
Trigger: GGCAGGGATGCGCCAGAGGCAGCAGCCCAGTCCCCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCCGGGATGCCACATaGGGGGCCATCGGCATCCGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSRDAT*GAIGIR
Trigger: GCGGATGCCGATGGCCCCCCATGTGGCATCCCGGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCCTGGGTGCGTGCCTaGGCTTCCTCCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPWVRA*ASSSVS
Trigger: GCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGTCCCCAGCCGGCCCTaGGTGCGTGCCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRVPSRP*VRAWAS
Trigger: GGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGAC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGPWEL*APWASP
Trigger: TGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGCCTGTGCAGCCTCTaGAGGCCAGCCCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSLCSL*RPAPLA
Trigger: GGCCAGCGGGGCTGGCCTCCAGAGGCTGCACAGGCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCGTCGCTGCTGGAGTaGGGTCGCCGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSASLLE*GRRSLC
Trigger: GCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGAAAGCGTCGCTGCTaGAGTGGGGTCGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGKRRC*SGVAAA
Trigger: GGCTGCGGCGACCCCACTCCAGCAGCGACGCTTTCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCTGGGCACTGACCTaGGCAGGGCCTCGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSWALT*AGPRSP
Trigger: GGGACTCCGAGGCCCTGCCCAGGTCAGTGCCCAGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTGGGCTGCTGCCTCTaGCGCATCCCTGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLGCCL*RIPAPA
Trigger: GGCGGGGGCAGGGATGCGCCAGAGGCAGCAGCCCAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCCCCTTCCGTAGGCTaGCGGGGCTGCCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPPSVG*RGCPVE
Trigger: CTCTACAGGGCAGCCCCGCCAGCCTACGGAAGGGGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGACCAGCTGGGAGTaGGGTAAGGGGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGTSWE*GKGVGD
Trigger: GTCCCCCACCCCCTTACCCCACTCCCAGCTGGTCCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGGTGCGGGATCCCCTaGGGTGGGGCTGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRCGIP*GGAAAA
Trigger: CGCTGCAGCAGCCCCACCCCAGGGGATCCCGCACCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGGGTCACCCTGGGTaGGAAGGCAGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGGHPG*EGRGRG
Trigger: GCCCCTGCCTCTGCCTTCCCACCCAGGGTGACCCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCAGCGGAGACAGCAGGAGCTaGATGTGGCCAAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: PQLRLLSTSPDSVSRYCSGDSRS*MWPKST
Trigger: CGTTGACTTTGGCCACATTCAGCTCCTGCTGTCTCC...GCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGCCAGGAACGGCCCTaGCAGGTCACCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGQERP*QVTCTP
Trigger: CGGGGTGCAGGTGACCTGTCAGGGCCGTTCCTGGCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGCCAGGAACGGCCCTaGCAGGTCACCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGQERP*QVTCTP
Trigger: CGGGGTGCAGGTGACCTGTCAGGGCCGTTCCTGGCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGTCGGGTCTGCTGCCTaGAGGCTGCGGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRVGSAA*RLRWGT
Trigger: CGTGCCCCACCGCAGCCTTCAGGCAGCAGACCCGAC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGGTGTTGGGGTGGCTaGGGCAGGTGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSWCWGG*GRCSPS
Trigger: GCTGGGGGAGCACCTGCCTCAGCCACCCCAACACCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGCTGGCGGGTAGCTaGGCAGGAAGTCGGGGGACC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGLAGS*AGSRGT
Trigger: GGTCCCCCGACTTCCTGCTCAGCTACCCGCCAGCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGGGGGACCGGGATCTaGACGGCTTCGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGWGTGI*TASGVG
Trigger: GCCCACCCCCGAAGCCGTTCAGATCCCGGTCCCCCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCTGGAAGCCTCGCTTaGCCCGCCACCAGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPGSLA*PATSSD
Trigger: ATCGGAGCTGGTGGCGGGGCAAGCGAGGCTTCCAGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCCATGCGGGCCAGGTaGCTCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRAMRAR*LSRYSR
Trigger: CCTGGAGTACCTGCTGAGGCACCTGGCCCGCATGGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGTGGAGGGGCAGCTaGCCGCAAGGGACTTGGGCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGWRGS*PQGTWA
Trigger: GGCCCAAGTCCCTTGCGGGCAGCTGCCCCTCCACCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCGGCCCTGGGTGCGTaGCTGGGCTTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPALGA*LGFLQR
Trigger: ACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCGGCCCTGGGTGCGTaGCTGGGCTTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPALGA*LGFLQR
Trigger: ACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTGCTGCCTGAAGGCTaGGGTGGGGCACGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLLPEG*GGARVP
Trigger: GGGCACCCGTGCCCCACCGCAGCCTTCAGGCAGCAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTGCTGCCTGAAGGCTaGGGTGGGGCACGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLLPEG*GGARVP
Trigger: GGGCACCCGTGCCCCACCGCAGCCTTCAGGCAGCAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGTCGCCGCAGCCTGTaGAGCCTCTGGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGRRSL*SLWRPA
Trigger: GGCTGGCCTCCAGAGGCTGCACAGGCTGCGGCGACC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCAGGGAAAGCGTCGCTaGTGGAGTGGGGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRQGKRR*WSGVAA
Trigger: TGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGTGCCCCCACACTCCTaGTGGCTCTGTTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRVPPHS*WLCCSA
Trigger: GGCCGAGCAACAGAGCCAGCAGGAGTGTGGGGGCAC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGTGGCACCAGCATCTaGGCAGCCCTGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSGTSI*AALAPS
Trigger: CGAGGGTGCCAGGGCTGCCCAGATGCTGGTGCCACT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGAAGAACCCGACCTaGAAGCCTCGCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGKNPT*KPRLPR
Trigger: GCGGGGCAAGCGAGGCTTCCAGGTCGGGTTCTTCCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGCCGGGATGCCACATaGGGGGCCATCGGCATCCGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSRDAT*GAIGIR
Trigger: GCGGATGCCGATGGCCCCCCATGTGGCATCCCGGCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGCCCGCAAGGGACTTaGGCCTGGGGAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSCPQGT*AWGAGS
Trigger: GCTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCGTCAGCAGGCGGGTaGAGGGGCAGCTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRASAGG*RGSCPQ
Trigger: TTGCGGGCAGCTGCCCCTCCACCCGCCTGCTGACGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCCTGGGTGCGTGCCTaGGCTTCCTCCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPWVRA*ASSSVS
Trigger: GCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGPWEL*APWASP
Trigger: TGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGCCTGTGCAGCCTCTaGAGGCCAGCCCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSLCSL*RPAPLA
Trigger: GGCCAGCGGGGCTGGCCTCCAGAGGCTGCACAGGCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCGTCGCTGCTGGAGTaGGGTCGCCGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRASLLE*GRRSLC
Trigger: GCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGACCGAGTGGGCCCTaGGCTCCCCGGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGPSGP*APRSLL
Trigger: CAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGACCGAGTGGGCCCTaGGCTCCCCGGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGPSGP*APRSLL
Trigger: CAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGCCATGAGGCGTGCTaGGTTCTTAGGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGHEAC*VLRGRG
Trigger: CCCCCGCCCCCTAAGAACCCAGCACGCCTCATGGCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCCCCACACTCCTGCTaGCTCTGTTGCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPPHSC*LCCSAT
Trigger: GGTGGCCGAGCAACAGAGCCAGCAGGAGTGTGGGGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGTCCCCATGGGCCGCTaGCTCCTCAGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSVPMGR*LLSRLP
Trigger: TGGGAGCCTGCTGAGGAGCCAGCGGCCCATGGGGAC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGCTGGGCACTGACCTaGGCAGGGCCTCGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSWALT*AGPRSP
Trigger: GGGACTCCGAGGCCCTGCCCAGGTCAGTGCCCAGCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGTGGCAGGCACTCCCTaGGGGCTGGGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRVAGTP*GLGRRS
Trigger: GCTTCTTCTCCCCAGCCCCCAGGGAGTGCCTGCCAC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGACTCCAGGAGCGGGTaGGGCCAGAATAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRDSRSG*GQNRGT
Trigger: GGTCCCCCTATTCTGGCCCCACCCGCTCCTGGAGTC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCCCCTTCCGTAGGCTaGCGGGGCTGCCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPPSVG*RGCPVE
Trigger: CTCTACAGGGCAGCCCCGCCAGCCTACGGAAGGGGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGGTGCGGGATCCCCTaGGGTGGGGCTGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRCGIP*GGAAAA
Trigger: CGCTGCAGCAGCCCCACCCCAGGGGATCCCGCACCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGGGTCACCCTGGGTaGGAAGGCAGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGGHPG*EGRGRG
Trigger: GCCCCTGCCTCTGCCTTCCCACCCAGGGTGACCCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCAGTCGCCGGCCGTaGTTGTCCAGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSSRRP*LSSSIQ
Trigger: CTGGATGGAGCTGGACAATCACGGCCGGCGACTGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTGACGCCTCCTCACTaGGGAGCAGTCGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVTPPH*GAVAGR
Trigger: ACGGCCGGCGACTGCTCCTCAGTGAGGAGGCGTCAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCTGGCCTGAGTTGCTaGGGTGCTCGCCAAGATCGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPGLSC*GARQDR
Trigger: GCGATCTTGGCGAGCACCTCAGCAACTCAGGCCAGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGGCAGCTGCTGGATaGCATCGTGCACCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGAAAG*HRAPAP
Trigger: TGGTGCGGGTGCACGATGTCATCCAGCAGCTGCCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCTCCTTTCCGCAGGTaGGGCCGGGGCCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPPFRR*GRGLGS
Trigger: ACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGAGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCCGCTGGCCTGCGATaGCAGAGACTCCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPAGLR*QRLLAL
Trigger: AAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGGTGTTGGGGTGGCTaGGGCAGGTGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGWCWGG*GRCSPS
Trigger: GCTGGGGGAGCACCTGCCTCAGCCACCCCAACACCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCAGCAGCAGGGGTATaGGATGGGGGCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRAAAGV*DGGAGS
Trigger: GGAGCCTGCGCCCCCATCTCATACCCCTGCTGCTGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCAGGCTGTCAGTGCTaGGTGCCACCATGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPGCQC*VPPWSR
Trigger: ACGCGACCATGGTGGCACGCAGCACTGACAGCCTGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCAGTGGGTAGAGGCTaGACCGAGCCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGAVGRG*TEPSPG
Trigger: CCCAGGGGAGGGCTCGGTGCAGCCTCTACCCACTGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR GCA 90 bp TTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCAGCAGCAGTAGTGTCTCCAGGTACTaGAGCAGCAGTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LRLLSTSPDSVSRYCSSSSVSRY*SSSGTS
Trigger: GCTGGTGCCACTGCTGCTGCAGTACCTGGAGACACT...ACTGCTGCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCTGGAAGCCTCGCTTaGCCCGCCACCAGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPGSLA*PATSSD
Trigger: ATCGGAGCTGGTGGCGGGGCAAGCGAGGCTTCCAGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGCAGGATTCCCCGCTaGCGCAGCCGCTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRRIPR*RSRCRE
Trigger: TTCTCGGCAGCGGCTGCGGCAGCGGGGAATCCTGCG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACGCAGGATTCCCCGCTaGCGCAGCCGCTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRRIPR*RSRCRE
Trigger: TTCTCGGCAGCGGCTGCGGCAGCGGGGAATCCTGCG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACGTCTTCCAGCTGCTaGCCCCTGGCTTCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTSSSC*PLASAA
Trigger: AGCAGCGGAAGCCAGGGGGCAGCAGCTGGAAGACGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGGCCCCGGCCCAGTaGAAAGAACGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGAPAQ*KERLPA
Trigger: AGCTGGAAGACGTTCTTTGCACTGGGCCGGGGCCCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCAGCCCCGCTGGCCTaGGATGACAGAGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPAPLA*DDRDSS
Trigger: CGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACAGGGAAAGCGTCGCTaGTGGAGTGGGGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSQGKRR*WSGVAA
Trigger: TGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCAGGAGCCAGCAGGTaGTGGGCCCACAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSAGASR*WAHRES
Trigger: GCTTTCCCTGTGGGCCCAGCACCTGCTGGCTCCTGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCCACCCCAGATTTGTaGGAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPTPDL*EGPQDG
Trigger: TCCATCCTGGGGGCCCTCGCACAAATCTGGGGTGGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACGTTCTCGTCGCCGCTaGCGCCGCCATGGCGACACA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRSRRR*RRHGDT
Trigger: TGTGTCGCCATGGCGGCGGCAGCGGCGACGAGAACG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATGGGGACTGGGCTGCTaGCTCTGGCGCATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRWGLGC*LWRIPA
Trigger: GGCAGGGATGCGCCAGAGGCAGCAGCCCAGTCCCCA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACATGGGGACTGGGCTaGTGCCTCTGGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTWGLG*CLWRIP
Trigger: AGGGATGCGCCAGAGGCAGCAGCCCAGTCCCCATGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGCTGCGTGCCACCATaGTCGCGTAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRCCVPP*SRSLLR
Trigger: CCTGAGGAGGCTACGCGACCATGGTGGCACGCAGCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACACCGAGCCCTCCCCTaGGCCATCCAGGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSHRALP*AIQAVS
Trigger: ACTGACAGCCTGGATGGCCCAGGGGAGGGCTCGGTG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGTGGCACCAGCATCTaGGCAGCCCTGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSGTSI*AALAPS
Trigger: CGAGGGTGCCAGGGCTGCCCAGATGCTGGTGCCACT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGAAGAACCCGACCTaGAAGCCTCGCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGKNPT*KPRLPR
Trigger: GCGGGGCAAGCGAGGCTTCCAGGTCGGGTTCTTCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGCCGGGATGCCACATaGGGGGCCATCGGCATCCGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSRDAT*GAIGIR
Trigger: GCGGATGCCGATGGCCCCCCATGTGGCATCCCGGCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACAGCAGCGCAGCACCTaGGGCACATCCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSQQRST*GTSWPE
Trigger: CTCAGGCCAGGATGTGCCCCAGGTGCTGCGCTGCTG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGCCCGCAAGGGACTTaGGCCTGGGGAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGCPQGT*AWGAGS
Trigger: GCTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATGCCCGCAAGGGACTTaGGCCTGGGGAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRCPQGT*AWGAGS
Trigger: GCTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGPWEL*APWASP
Trigger: TGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTGAGGCCGGGGCCTTaGGAGTTGTGGGCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVRPGP*ELWAPW
Trigger: CCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGAGGCCAGCCCCGCTaGCCTGCGATGACAGAGACT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGGQPR*PAMTET
Trigger: AGTCTCTGTCATCGCAGGCCAGCGGGGCTGGCCTCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGTGGAGGGACCAGCTaGGAGTGGGGTAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSGGTS*EWGNGV
Trigger: CACCCCGTTACCCCACTCCCAGCTGGTCCCTCCACT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000007510.8
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACGGCCCCTCCCAGCTaGTGCTCAGCAGTAGCTTCG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTAPPS*CSAVAS
Trigger: CGAAGCTACTGCTGAGCACCAGCTGGGAGGGGCCGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCAGGATGGAGGGTGGTaGGGGGATGGGCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRQDGGW*GDGQTL
Trigger: AAGGGTCTGCCCATCCCCCCACCACCCTCCATCCTG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACATATCAGGACCGAGTaGGCCCTGGGCTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSHIRTE*ALGSPE
Trigger: CTCCGGGGAGCCCAGGGCCCACTCGGTCCTGATATG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGCCATGAGGCGTGCTaGGTTCTTAGGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGHEAC*VLRGRG
Trigger: CCCCCGCCCCCTAAGAACCCAGCACGCCTCATGGCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCCCCACACTCCTGCTaGCTCTGTTGCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPPHSC*LCCSAT
Trigger: GGTGGCCGAGCAACAGAGCCAGCAGGAGTGTGGGGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACGGTGGAAGGGGGATTaGGAAGCAGGTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRWKGD*EAGGVP
Trigger: GGGCACCCCACCTGCTTCCCAATCCCCCTTCCACCG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGTCCCCATGGGCCGCTaGCTCCTCAGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRVPMGR*LLSRLP
Trigger: TGGGAGCCTGCTGAGGAGCCAGCGGCCCATGGGGAC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTCCCCATGGGCCGCTaGCTCCTCAGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVPMGR*LLSRLP
Trigger: TGGGAGCCTGCTGAGGAGCCAGCGGCCCATGGGGAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGTGGCAGGCACTCCCTaGGGGCTGGGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSVAGTP*GLGRRS
Trigger: GCTTCTTCTCCCCAGCCCCCAGGGAGTGCCTGCCAC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTACAAGCCTGGCTTaGGGACCCCGAGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGTSLA*GPRGRV
Trigger: CACCCTTCCTCGGGGTCCCCAAGCCAGGCTTGTACC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCCTCCAGACTGGGGCTaGGGAACTGGGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRPPDWG*GTGLEG
Trigger: TCCTTCCAGCCCAGTTCCCCAGCCCCAGTCTGGAGG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGAGCTCCTCCAGACTaGGGCTGGGGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRAPPD*GWGTGL
Trigger: CAGCCCAGTTCCCCAGCCCCAGTCTGGAGGAGCTCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGTGCCCGTTGTTTCTaGGGAAGGCGGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGARCF*GRRGTG
Trigger: CCCAGTCCCCCGCCTTCCCCAGAAACAACGGGCACC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCCCCTTCCGTAGGCTaGCGGGGCTGCCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPPSVG*RGCPVE
Trigger: CTCTACAGGGCAGCCCCGCCAGCCTACGGAAGGGGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGACCAGCTGGGAGTaGGGTAAGGGGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGTSWE*GKGVGD
Trigger: GTCCCCCACCCCCTTACCCCACTCCCAGCTGGTCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGACCAGCTGGGAGTaGGGTAAGGGGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGTSWE*GKGVGD
Trigger: GTCCCCCACCCCCTTACCCCACTCCCAGCTGGTCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGTGGAGGGACCAGCTaGGAGTGGGGTAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSGGTS*EWGKGV
Trigger: CACCCCCTTACCCCACTCCCAGCTGGTCCCTCCACT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGGCCTCGAGGAGCTaGGAGCCTCTTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGASRS*EPLPRL
Trigger: AAGCCTGGGAAGAGGCTCTCAGCTCCTCGAGGCCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCACAGGCCCGCAGTTaGGGTTACTGTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRAQARS*GYCPPV
Trigger: GACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGCACATCCTGGCCTaGGTTGCTGAGGTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGHILA*VAEVLA
Trigger: GGCGAGCACCTCAGCAACTCAGGCCAGGATGTGCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGCACATCCTGGCCTaGGTTGCTGAGGTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGHILA*VAEVLA
Trigger: GGCGAGCACCTCAGCAACTCAGGCCAGGATGTGCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCCCGTGGGCCTCAATaGACTCGGAGCAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPRGPQ*TRSSSA
Trigger: TGCGCTGCTGCTCCGAGTTCATTGAGGCCCACGGGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCCCGTGGGCCTCAATaGACTCGGAGCAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPRGPQ*TRSSSA
Trigger: TGCGCTGCTGCTCCGAGTTCATTGAGGCCCACGGGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGGCAGCTGCTGGATaGCATCGTGCACCCGCACCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGAAAG*HRAPAP
Trigger: TGGTGCGGGTGCACGATGTCATCCAGCAGCTGCCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCCACCCATTCCCACTaGCTCCAGCTCCATGGACCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSATHSH*LQLHGP
Trigger: CGGTCCATGGAGCTGGAGTCAGTGGGAATGGGTGGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCCGCTGGCCTGCGATaGCAGAGACTCCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPAGLR*QRLLAL
Trigger: AAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCCCTAGAGCTAGGTTaGCGTAGAGGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSALELG*RRGAQA
Trigger: CGCCTGAGCCCCTCTACGTCAACCTAGCTCTAGGGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGCAGCGGGGTGGGCTaGAGTCCAGCTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGSGVG*SPAHHH
Trigger: ATGGTGATGAGCTGGACTTCAGCCCACCCCGCTGCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCTGGAAGCCTCGCTTaGCCCGCCACCAGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPGSLA*PATSSD
Trigger: ATCGGAGCTGGTGGCGGGGCAAGCGAGGCTTCCAGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGATGTCCTGCAGGAATaGAGGGCCAGACAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRDVLQE*RARQLR
Trigger: CCGGAGCTGTCTGGCCCTGCATTCCTGCAGGACATC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGCTGGATGACATCGTaGACCCGCACCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRCWMTS*TRTRRS
Trigger: GGAGCGTCTGGTGCGGGTGCACGATGTCATCCAGCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCCATGCGGGCCAGGTaGCTCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRAMRAR*LSRYSR
Trigger: CCTGGAGTACCTGCTGAGGCACCTGGCCCGCATGGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCCATGCGGGCCAGGTaGCTCAGCAGGTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGAMRAR*LSRYSR
Trigger: CCTGGAGTACCTGCTGAGGCACCTGGCCCGCATGGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTCCACCACCACCGACTaGACCCGAACTTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSTTTD*TRTSRN
Trigger: GTTCCGGGAAGTTCGGGTGCAGTCGGTGGTGGTGGA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAACGTCTTCCAGCTGCTaGCCCCTGGCTTCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSTSSSC*PLASAA
Trigger: AGCAGCGGAAGCCAGGGGGCAGCAGCTGGAAGACGT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGGCCCCGGCCCAGTaGAAAGAACGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGAPAQ*KERLPA
Trigger: AGCTGGAAGACGTTCTTTGCACTGGGCCGGGGCCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCAGCCCCGCTGGCCTaGGATGACAGAGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPAPLA*DDRDSS
Trigger: CGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGGGAAAGCGTCGCTaGTGGAGTGGGGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQGKRR*WSGVAA
Trigger: TGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCAGGAGCCAGCAGGTaGTGGGCCCACAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRAGASR*WAHRES
Trigger: GCTTTCCCTGTGGGCCCAGCACCTGCTGGCTCCTGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCAGGAGCCAGCAGGTaGTGGGCCCACAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGAGASR*WAHRES
Trigger: GCTTTCCCTGTGGGCCCAGCACCTGCTGGCTCCTGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCCACCCCAGATTTGTaGGAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPTPDL*EGPQDG
Trigger: TCCATCCTGGGGGCCCTCGCACAAATCTGGGGTGGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCAGGGCCATGAGGCGTaGTGGGTTCTTAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGQGHEA*WVLRGR
Trigger: CCGCCCCCTAAGAACCCAGCACGCCTCATGGCCCTG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGGGCCATGAGGCGTaGTGGGTTCTTAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQGHEA*WVLRGR
Trigger: CCGCCCCCTAAGAACCCAGCACGCCTCATGGCCCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTGCCCCCACACTCCTaGTGGCTCTGTTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVPPHS*WLCCSA
Trigger: GGCCGAGCAACAGAGCCAGCAGGAGTGTGGGGGCAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGTAGGCTGGCGGGGCTaGCCTGTAGAGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRVGWRG*PVEQER
Trigger: CCTCTCCTGCTCTACAGGGCAGCCCCGCCAGCCTAC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTAGGCTGGCGGGGCTaGCCTGTAGAGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVGWRG*PVEQER
Trigger: CCTCTCCTGCTCTACAGGGCAGCCCCGCCAGCCTAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACACCGAGCCCTCCCCTaGGCCATCCAGGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRHRALP*AIQAVS
Trigger: ACTGACAGCCTGGATGGCCCAGGGGAGGGCTCGGTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGTGGCACCAGCATCTaGGCAGCCCTGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSGTSI*AALAPS
Trigger: CGAGGGTGCCAGGGCTGCCCAGATGCTGGTGCCACT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCTTCAGGCCCGGACCTaGCCGCTCTGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRLQART*PLCEEF
Trigger: GAACTCTTCACAGAGCGGCCAGGTCCGGGCCTGAAG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACCTGGGGCACATCCTaGCCTGAGTTGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTWGTS*PELLRC
Trigger: GCACCTCAGCAACTCAGGCCAGGATGTGCCCCAGGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGCAGCGCAGCACCTaGGGCACATCCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQQRST*GTSWPE
Trigger: CTCAGGCCAGGATGTGCCCCAGGTGCTGCGCTGCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATCTTTCGAGGGACACTaGGGCCCCGGCCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSFEGH*GPGPVQ
Trigger: TTGCACTGGGCCGGGGCCCCAGTGTCCCTCGAAAGA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAACGGCCCCTCCCAGCTaGTGCTCAGCAGTAGCTTCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSTAPPS*CSAVAS
Trigger: CGAAGCTACTGCTGAGCACCAGCTGGGAGGGGCCGT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACATATCAGGACCGAGTaGGCCCTGGGCTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRHIRTE*ALGSPE
Trigger: CTCCGGGGAGCCCAGGGCCCACTCGGTCCTGATATG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCATATCAGGACCGAGTaGGCCCTGGGCTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGHIRTE*ALGSPE
Trigger: CTCCGGGGAGCCCAGGGCCCACTCGGTCCTGATATG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGGAAGGGGGATTaGGAAGCAGGTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRWKGD*EAGGVP
Trigger: GGGCACCCCACCTGCTTCCCAATCCCCCTTCCACCG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACGGTGGAAGGGGGATTaGGAAGCAGGTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRWKGD*EAGGVP
Trigger: GGGCACCCCACCTGCTTCCCAATCCCCCTTCCACCG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGTGTGCTAGGGAGTTaGGAGGTGGCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGVLGS*EVAHSL
Trigger: CAGGGAGTGGGCCACCTCCCAACTCCCTAGCACACC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATCCTTGAGGTCCCCATaGGCCGCTGGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSLRSP*AAGSSA
Trigger: TGCTGAGGAGCCAGCGGCCCATGGGGACCTCAAGGA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACAGAACATGGGGACTaGGCTGCTGCCTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTEHGD*AAASGA
Trigger: TGCGCCAGAGGCAGCAGCCCAGTCCCCATGTTCTGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGTGGCAGGCACTCCCTaGGGGCTGGGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRVAGTP*GLGRRS
Trigger: GCTTCTTCTCCCCAGCCCCCAGGGAGTGCCTGCCAC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCTCCTCCAGACTaGGGCTGGGGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRAPPD*GWGTGL
Trigger: CAGCCCAGTTCCCCAGCCCCAGTCTGGAGGAGCTCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGACTCCAGGAGCGGGTaGGGCCAGAATAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGDSRSG*GQNRGT
Trigger: GGTCCCCCTATTCTGGCCCCACCCGCTCCTGGAGTC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGTGCCCGTTGTTTCTaGGGAAGGCGGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGARCF*GRRGTG
Trigger: CCCAGTCCCCCGCCTTCCCCAGAAACAACGGGCACC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGTGCCCGTTGTTTCTaGGGAAGGCGGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGARCF*GRRGTG
Trigger: CCCAGTCCCCCGCCTTCCCCAGAAACAACGGGCACC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGTGGAGGGACCAGCTaGGAGTGGGGTAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSGGTS*EWGKGV
Trigger: CACCCCCTTACCCCACTCCCAGCTGGTCCCTCCACT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACATGCTGGGGGCTCCTaGAGGGAGAGGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRHAGGS*RERRMG
Trigger: CCCCATCCTCCTCTCCCTCCAGGAGCCCCCAGCATG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACAGGTCAGGACATGCTaGGGGCTCCTGGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSQVRTC*GLLEGE
Trigger: CTCTCCCTCCAGGAGCCCCCAGCATGTCCTGACCTG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTCCAGGCAGCGGGGTaGGCTGAAGTCCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLQAAG*AEVQLI
Trigger: GATGAGCTGGACTTCAGCCCACCCCGCTGCCTGGAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCACAGGCCCGCAGTTaGGGTTACTGTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSAQARS*GYCPPV
Trigger: GACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGCAGTCGCCGGCCGTaGTTGTCCAGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSSRRP*LSSSIQ
Trigger: CTGGATGGAGCTGGACAATCACGGCCGGCGACTGCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGCAGTCGCCGGCCGTaGTTGTCCAGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSSRRP*LSSSIQ
Trigger: CTGGATGGAGCTGGACAATCACGGCCGGCGACTGCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGCCACCCATTCCCACTaGCTCCAGCTCCATGGACCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRATHSH*LQLHGP
Trigger: CGGTCCATGGAGCTGGAGTCAGTGGGAATGGGTGGC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGACGTCCACATGGGTaGGCAGAAACTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGRPHG*AETPPP
Trigger: TGGTGGTGGAGTTTCTGCTCACCCATGTGGACGTCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGGCAGATCTCAGTGTaGCGGTGTCGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSWQISV*RCRVCC
Trigger: GCAGCAGACCCGACACCGTCACACTGAGATCTGCCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCCGCTGGCCTGCGATaGCAGAGACTCCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPAGLR*QRLLAL
Trigger: AAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTAACGGGGTGGGCTaGAGTCCAGCTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGNGVG*SPAHHH
Trigger: ATGGTGATGAGCTGGACTTCAGCCCACCCCGTTACC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000007510.8
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGGGGGTGGCAGTGGTaGCTCCATATCAGGACCGAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRGWQW*LHIRTE
Trigger: CTCGGTCCTGATATGGAGTCACCACTGCCACCCCCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCTGTGGAGTGGGGGTaGTTGGCCAAGCATGCCGTA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPVEWG*LAKHAV
Trigger: TACGGCATGCTTGGCCAATCACCCCCACTCCACAGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCCCTAGAGCTAGGTTaGCGTAGAGGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGALELG*RRGAQA
Trigger: CGCCTGAGCCCCTCTACGTCAACCTAGCTCTAGGGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGCAGCGGGGTGGGCTaGAGTCCAGCTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGSGVG*SPAHHH
Trigger: ATGGTGATGAGCTGGACTTCAGCCCACCCCGCTGCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACATCCAGGCTGTCAGTaGTGCGTGCCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSHPGCQ*CVPPWS
Trigger: CGACCATGGTGGCACGCAGCACTGACAGCCTGGATG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGTGTCTCCAGGTACTaGAGCAGCAGTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSVSRY*SSSGTS
Trigger: GCTGGTGCCACTGCTGCTGCAGTACCTGGAGACACT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGATGTCCTGCAGGAATaGAGGGCCAGACAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSDVLQE*RARQLR
Trigger: CCGGAGCTGTCTGGCCCTGCATTCCTGCAGGACATC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACGCTGTGGATGTCCTaGAGGAATGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTLWMS*RNAGPD
Trigger: GTCTGGCCCTGCATTCCTGCAGGACATCCACAGCGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTGCGGGCATGCATaGTGGTGTTGGCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGCGHA*WCWHCV
Trigger: GACACAGTGCCAACACCAGCATGCATGCCCGCAACC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACGTCTTCCAGCTGCTaGCCCCTGGCTTCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTSSSC*PLASAA
Trigger: AGCAGCGGAAGCCAGGGGGCAGCAGCTGGAAGACGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACGTCTTCCAGCTaGTGCCCCCTGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRTSSS*CPLASA
Trigger: AGCGGAAGCCAGGGGGCAGCAGCTGGAAGACGTTCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGGCCCCGGCCCAGTaGAAAGAACGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGAPAQ*KERLPA
Trigger: AGCTGGAAGACGTTCTTTGCACTGGGCCGGGGCCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCCACCCCAGATTTGTaGGAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPTPDL*EGPQDG
Trigger: TCCATCCTGGGGGCCCTCGCACAAATCTGGGGTGGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCCACCCCAGATTTGTaGGAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPTPDL*EGPQDG
Trigger: TCCATCCTGGGGGCCCTCGCACAAATCTGGGGTGGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATCAGCCCCGCTGGCCTaGGATGACAGAGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSAPLA*DDRDSS
Trigger: CGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314737.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTCCCCGGAGCTTGCTaGACATCTCCTGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLPGAC*TSPAGR
Trigger: CCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTCCCCGGAGCTTGCTaGACATCTCCTGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLPGAC*TSPAGR
Trigger: CCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACATGGGGACTGGGCTaGTGCCTCTGGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTWGLG*CLWRIP
Trigger: AGGGATGCGCCAGAGGCAGCAGCCCAGTCCCCATGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CAGCTCCATCCAGGTGAGCACAGGCCCGCAGTTGAGGTTACTGTCCACCAGTCCATTTCTCTATCCCGCTaGCTTGATGATTTCACACTG +
Preference number: 4 (lower is better)
Translates to: QLHPGEHRPAVEVTVHQSISLSR*LDDFTL
Trigger: CAGTGTGAAATCATCAAGGCAGCGGGATAGAGAAAT...GGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGCTGCGTGCCACCATaGTCGCGTAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGCCVPP*SRSLLR
Trigger: CCTGAGGAGGCTACGCGACCATGGTGGCACGCAGCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGATGCACCGGTGGAGGTaGGCATCCAGGGAACGAAAG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRMHRWR*ASRERK
Trigger: CTTTCGTTCCCTGGATGCCCACCTCCACCGGTGCAT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATACCGTTTGATCACATaGGCGGCCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSYRLIT*AAATAG
Trigger: CCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCTCCGATCCTCTGTaGGTGGCATGTCGATCACCG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSSDPL*VACRSP
Trigger: CGGTGATCGACATGCCACCCACAGAGGATCGGAGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGAGACGAGATACCCTaGGGAGCCGGGATGCCACAT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRDEIP*GAGMPH
Trigger: ATGTGGCATCCCGGCTCCCCAGGGTATCTCGTCTCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGGACCGTAGCAGGTTaGGTGCCCAGACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRWTVAG*VPRQWP
Trigger: TGGCCATTGTCTGGGCACCCAACCTGCTACGGTCCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCTTTCGAGGGACACTaGGGCCCCGGCCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSFEGH*GPGPVQ
Trigger: TTGCACTGGGCCGGGGCCCCAGTGTCCCTCGAAAGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACGGCCCCTCCCAGCTaGTGCTCAGCAGTAGCTTCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTAPPS*CSAVAS
Trigger: CGAAGCTACTGCTGAGCACCAGCTGGGAGGGGCCGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACGGCCCCTCCCAGCTaGTGCTCAGCAGTAGCTTCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTAPPS*CSAVAS
Trigger: CGAAGCTACTGCTGAGCACCAGCTGGGAGGGGCCGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGGATGGAGGGTGGTaGGGGGATGGGCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQDGGW*GDGQTL
Trigger: AAGGGTCTGCCCATCCCCCCACCACCCTCCATCCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCAGGATGGAGGGTGGTaGGGGGATGGGCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGQDGGW*GDGQTL
Trigger: AAGGGTCTGCCCATCCCCCCACCACCCTCCATCCTG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTGCACATCTCCTGCTaGCAGGCGTCAGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLHISC*QASVSG
Trigger: CCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTGCACATCTCCTGCTaGCAGGCGTCAGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLHISC*QASVSG
Trigger: CCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGAGACAGCGAGCGGTaGAAGGGGGATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRDSER*KGDWEA
Trigger: TGCTTCCCAATCCCCCTTCCACCGCTCGCTGTCTCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGTGTGCTAGGGAGTTaGGAGGTGGCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGVLGS*EVAHSL
Trigger: CAGGGAGTGGGCCACCTCCCAACTCCCTAGCACACC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATCCTTGAGGTCCCCATaGGCCGCTGGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSLRSP*AAGSSA
Trigger: TGCTGAGGAGCCAGCGGCCCATGGGGACCTCAAGGA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCCTTGAGGTCCCCATaGGCCGCTGGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSLRSP*AAGSSA
Trigger: TGCTGAGGAGCCAGCGGCCCATGGGGACCTCAAGGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGTACAAGCCTGGCTTaGGGACCCCGAGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGTSLA*GPRGRV
Trigger: CACCCTTCCTCGGGGTCCCCAAGCCAGGCTTGTACC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCTCCAGACTGGGGCTaGGGAACTGGGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPPDWG*GTGLEG
Trigger: TCCTTCCAGCCCAGTTCCCCAGCCCCAGTCTGGAGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGAGCTCCTCCAGACTaGGGCTGGGGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRAPPD*GWGTGL
Trigger: CAGCCCAGTTCCCCAGCCCCAGTCTGGAGGAGCTCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAAGTCGGGGGACCTGTaGAGTGGGGGTGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSKSGDL*SGGDWP
Trigger: TGGCCAATCACCCCCACTCCACAGGTCCCCCGACTT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAAAGCAGGAGGGGGCTaGCGGGTAGCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSKAGGG*RVAEQE
Trigger: TTCCTGCTCAGCTACCCGCCAGCCCCCTCCTGCTTT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGTGGAGGGACCAGCTaGGAGTGGGGTAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSGGTS*EWGKGV
Trigger: CACCCCCTTACCCCACTCCCAGCTGGTCCCTCCACT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGGTCAGGACATGCTaGGGGCTCCTGGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQVRTC*GLLEGE
Trigger: CTCTCCCTCCAGGAGCCCCCAGCATGTCCTGACCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTCCAGGCAGCGGGGTaGGCTGAAGTCCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLQAAG*AEVQLI
Trigger: GATGAGCTGGACTTCAGCCCACCCCGCTGCCTGGAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCACAGGCCCGCAGTTaGGGTTACTGTCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGAQARS*GYCPPV
Trigger: GACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGCTGTATACCGTTTaGTCACATGGGCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGLYTV*SHGRPP
Trigger: TGGCGGCCGCCCATGTGATCAAACGGTATACAGCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGCTGTATACCGTTTaGTCACATGGGCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGLYTV*SHGRPP
Trigger: TGGCGGCCGCCCATGTGATCAAACGGTATACAGCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTCCTCCCCAGGCACTaGCATGGCCTCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLLPRH*HGLTEL
Trigger: AAGTTCAGTGAGGCCATGTCAGTGCCTGGGGAGGAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGACGTCCACATGGGTaGGCAGAAACTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGRPHG*AETPPP
Trigger: TGGTGGTGGAGTTTCTGCTCACCCATGTGGACGTCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGGCAGATCTCAGTGTaGCGGTGTCGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGWQISV*RCRVCC
Trigger: GCAGCAGACCCGACACCGTCACACTGAGATCTGCCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATGGCAGATCTCAGTGTaGCGGTGTCGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRWQISV*RCRVCC
Trigger: GCAGCAGACCCGACACCGTCACACTGAGATCTGCCA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGGGGGTGGCAGTGGTaGCTCCATATCAGGACCGAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRGWQW*LHIRTE
Trigger: CTCGGTCCTGATATGGAGTCACCACTGCCACCCCCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGGGGGTGGCAGTGGTaGCTCCATATCAGGACCGAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRGWQW*LHIRTE
Trigger: CTCGGTCCTGATATGGAGTCACCACTGCCACCCCCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCTGTGGAGTGGGGGTaGTTGGCCAAGCATGCCGTA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPVEWG*LAKHAV
Trigger: TACGGCATGCTTGGCCAATCACCCCCACTCCACAGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCATCCAGGCTGTCAGTaGTGCGTGCCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGHPGCQ*CVPPWS
Trigger: CGACCATGGTGGCACGCAGCACTGACAGCCTGGATG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007510.8
ENST00000314737.9
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACCTCCGGTCAAATATaGACCGGTGGAGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTSGQI*TGGGGH
Trigger: ATGCCCACCTCCACCGGTGCATATTTGACCGGAGGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGTGTCTCCAGGTACTaGAGCAGCAGTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSVSRY*SSSGTS
Trigger: GCTGGTGCCACTGCTGCTGCAGTACCTGGAGACACT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGATGTCCTGCAGGAATaGAGGGCCAGACAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRDVLQE*RARQLR
Trigger: CCGGAGCTGTCTGGCCCTGCATTCCTGCAGGACATC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAACGCTGTGGATGTCCTaGAGGAATGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSTLWMS*RNAGPD
Trigger: GTCTGGCCCTGCATTCCTGCAGGACATCCACAGCGT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGCTGGATGACATCGTaGACCCGCACCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGCWMTS*TRTRRS
Trigger: GGAGCGTCTGGTGCGGGTGCACGATGTCATCCAGCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATCCACCACCACCGACTaGACCCGAACTTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSTTTD*TRTSRN
Trigger: GTTCCGGGAAGTTCGGGTGCAGTCGGTGGTGGTGGA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCCACCACCACCGACTaGACCCGAACTTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSTTTD*TRTSRN
Trigger: GTTCCGGGAAGTTCGGGTGCAGTCGGTGGTGGTGGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGAACGTCTTCCAGCTaGTGCCCCCTGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRTSSS*CPLASA
Trigger: AGCGGAAGCCAGGGGGCAGCAGCTGGAAGACGTTCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGGGACCCCTCACTTaGCCCGATCTCATAGTACAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGGPLT*PDLIVQ
Trigger: CTGTACTATGAGATCGGGGCAAGTGAGGGGTCCCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCCCCCTCCCCTCTTTaGCCTCCATTTCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRAPSPL*PPFLYK
Trigger: CTTGTACAGAAATGGAGGGCAAAGAGGGGAGGGGGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGCCCTTCACGGTCTaGAGACAGCAGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGPFTV*RQQELN
Trigger: ATTCAGCTCCTGCTGTCTCCAGACCGTGAAGGGCCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATACCGTTTGATCACATaGGCGGCCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRYRLIT*AAATAG
Trigger: CCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCGATCCTCTGTGGGTaGCATGTCGATCACCGAGAC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPILCG*HVDHRD
Trigger: GTCTCGGTGATCGACATGCCACCCACAGAGGATCGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGCTCCGATCCTCTGTaGGTGGCATGTCGATCACCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSSDPL*VACRSP
Trigger: CGGTGATCGACATGCCACCCACAGAGGATCGGAGCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTTCAGGCCCGGACCTaGCCGCTCTGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLQART*PLCEEF
Trigger: GAACTCTTCACAGAGCGGCCAGGTCCGGGCCTGAAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTTCAGGCCCGGACCTaGCCGCTCTGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLQART*PLCEEF
Trigger: GAACTCTTCACAGAGCGGCCAGGTCCGGGCCTGAAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACCTGGGGCACATCCTaGCCTGAGTTGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTWGTS*PELLRC
Trigger: GCACCTCAGCAACTCAGGCCAGGATGTGCCCCAGGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCATCCACCACCCCGTaGGCCTCAATGAACTCGGAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPSTTP*ASMNSE
Trigger: CTCCGAGTTCATTGAGGCCCACGGGGTGGTGGATGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGAAGCCTCTGGATGTTaGAAGACACGCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGREASGC*KTRLRA
Trigger: GGCTCTCAGGCGTGTCTTCCAACATCCAGAGGCTTC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTCGTGCCGAAGCCTCTaGATGTTGGAAGACACGCCT +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSCRSL*MLEDTP
Trigger: AGGCGTGTCTTCCAACATCCAGAGGCTTCGGCACGA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCATGCATGCTGGTGTTaGCACTGTGTCTCGCCATGC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRHACWC*HCVSPC
Trigger: GCATGGCGAGACACAGTGCCAACACCAGCATGCATG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGCGGGCATGCATGCTaGTGTTGGCACTGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSCGHAC*CWHCVS
Trigger: CGAGACACAGTGCCAACACCAGCATGCATGCCCGCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGGACCGTAGCAGGTTaGGTGCCCAGACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSWTVAG*VPRQWP
Trigger: TGGCCATTGTCTGGGCACCCAACCTGCTACGGTCCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGTGGGGTAACGGGGTaGGCTGAAGTCCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSGVTG*AEVQLI
Trigger: GATGAGCTGGACTTCAGCCCACCCCGTTACCCCACT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000007510.8
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGACAGCGAGCGGTaGAAGGGGGATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRDSER*KGDWEA
Trigger: TGCTTCCCAATCCCCCTTCCACCGCTCGCTGTCTCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACAGAACATGGGGACTaGGCTGCTGCCTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTEHGD*AAASGA
Trigger: TGCGCCAGAGGCAGCAGCCCAGTCCCCATGTTCTGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314737.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAAGTCGGGGGACCTGTaGAGTGGGGGTGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGKSGDL*SGGDWP
Trigger: TGGCCAATCACCCCCACTCCACAGGTCCCCCGACTT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAAGTCGGGGGACCTGTaGAGTGGGGGTGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRKSGDL*SGGDWP
Trigger: TGGCCAATCACCCCCACTCCACAGGTCCCCCGACTT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAAAGCAGGAGGGGGCTaGCGGGTAGCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGKAGGG*RVAEQE
Trigger: TTCCTGCTCAGCTACCCGCCAGCCCCCTCCTGCTTT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAAAGCAGGAGGGGGCTaGCGGGTAGCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRKAGGG*RVAEQE
Trigger: TTCCTGCTCAGCTACCCGCCAGCCCCCTCCTGCTTT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGAGACAGCAGGAGCTaGATGTGGCCAAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGDSRS*MWPKST
Trigger: CGTTGACTTTGGCCACATTCAGCTCCTGCTGTCTCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGACGTCCACATGGGTaGGCAGAAACTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGRPHG*AETPPP
Trigger: TGGTGGTGGAGTTTCTGCTCACCCATGTGGACGTCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGTGTCTCCAGGTACTaGAGCAGCAGTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSVSRY*SSSGTS
Trigger: GCTGGTGCCACTGCTGCTGCAGTACCTGGAGACACT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACGCTGTGGATGTCCTaGAGGAATGCAGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTLWMS*RNAGPD
Trigger: GTCTGGCCCTGCATTCCTGCAGGACATCCACAGCGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTCGGAAGTAGAGCTTaGAGAGGGAGGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLGSRA*RGRTRC
Trigger: ACAGCGTGTCCTCCCTCTGCAAGCTCTACTTCCGAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGTTGCGGGCATGCATaGTGGTGTTGGCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGCGHA*WCWHCV
Trigger: GACACAGTGCCAACACCAGCATGCATGCCCGCAACC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGTTGCGGGCATGCATaGTGGTGTTGGCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGCGHA*WCWHCV
Trigger: GACACAGTGCCAACACCAGCATGCATGCCCGCAACC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGGGACCCCTCACTTaGCCCGATCTCATAGTACAG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGGPLT*PDLIVQ
Trigger: CTGTACTATGAGATCGGGGCAAGTGAGGGGTCCCCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR GCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCCCCCTCCCCTCTTTaGCCTCCATTTCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSAPSPL*PPFLYK
Trigger: CTTGTACAGAAATGGAGGGCAAAGAGGGGAGGGGGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGGGCCCTTCACGGTCTaGAGACAGCAGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGGPFTV*RQQELN
Trigger: ATTCAGCTCCTGCTGTCTCCAGACCGTGAAGGGCCC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTATGCACCGGTGGAGGTaGGCATCCAGGGAACGAAAG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGMHRWR*ASRERK
Trigger: CTTTCGTTCCCTGGATGCCCACCTCCACCGGTGCAT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCTCATCTGGCGCCTaGGCTGTATACCGTTTGATC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSSSGA*AVYRLI
Trigger: GATCAAACGGTATACAGCCCAGGCGCCAGATGAGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAAAGGACAGCTCATCTaGCGCCTGGGCTGTATACCG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSKGQLI*RLGCIP
Trigger: CGGTATACAGCCCAGGCGCCAGATGAGCTGTCCTTT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCGATCCTCTGTGGGTaGCATGTCGATCACCGAGAC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPILCG*HVDHRD
Trigger: GTCTCGGTGATCGACATGCCACCCACAGAGGATCGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGCTCCGATCCTCTGTaGGTGGCATGTCGATCACCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSSDPL*VACRSP
Trigger: CGGTGATCGACATGCCACCCACAGAGGATCGGAGCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGTTCCACACACTCACTaGGGAAGAACCCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSVPHTH*GRTRPG
Trigger: TCCAGGTCGGGTTCTTCCCCAGTGAGTGTGTGGAAC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGAGACGAGATACCCTaGGGAGCCGGGATGCCACAT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRDEIP*GAGMPH
Trigger: ATGTGGCATCCCGGCTCCCCAGGGTATCTCGTCTCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGAGACGAGATACCCTaGGGAGCCGGGATGCCACAT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRDEIP*GAGMPH
Trigger: ATGTGGCATCCCGGCTCCCCAGGGTATCTCGTCTCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGAAGCCTCTGGATGTTaGAAGACACGCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSEASGC*KTRLRA
Trigger: GGCTCTCAGGCGTGTCTTCCAACATCCAGAGGCTTC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATCGTGCCGAAGCCTCTaGATGTTGGAAGACACGCCT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSCRSL*MLEDTP
Trigger: AGGCGTGTCTTCCAACATCCAGAGGCTTCGGCACGA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGGGAGGACACGCTGTaGATGTCCTGCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSREDTL*MSCRNA
Trigger: TGCATTCCTGCAGGACATCCACAGCGTGTCCTCCCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACATGCATGCTGGTGTTaGCACTGTGTCTCGCCATGC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSHACWC*HCVSPC
Trigger: GCATGGCGAGACACAGTGCCAACACCAGCATGCATG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATGCGGGCATGCATGCTaGTGTTGGCACTGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRCGHAC*CWHCVS
Trigger: CGAGACACAGTGCCAACACCAGCATGCATGCCCGCA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATGGACCGTAGCAGGTTaGGTGCCCAGACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRWTVAG*VPRQWP
Trigger: TGGCCATTGTCTGGGCACCCAACCTGCTACGGTCCA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAACAGGACGTCCACATaGGTGAGCAGAAACTCCACC +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRNRTST*VSRNST
Trigger: GGTGGAGTTTCTGCTCACCCATGTGGACGTCCTGTT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGAGACAGCGAGCGGTaGAAGGGGGATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRDSER*KGDWEA
Trigger: TGCTTCCCAATCCCCCTTCCACCGCTCGCTGTCTCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGAGACAGCAGGAGCTaGATGTGGCCAAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGDSRS*MWPKST
Trigger: CGTTGACTTTGGCCACATTCAGCTCCTGCTGTCTCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR TCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTGACATGGCCTCACTaGACTTCCCATAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLTWPH*TSHRAG
Trigger: ACCAGCTCTATGGGAAGTTCAGTGAGGCCATGTCAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACCTCCGGTCAAATATaGACCGGTGGAGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTSGQI*TGGGGH
Trigger: ATGCCCACCTCCACCGGTGCATATTTGACCGGAGGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR GCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTCGGAAGTAGAGCTTaGAGAGGGAGGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLGSRA*RGRTRC
Trigger: ACAGCGTGTCCTCCCTCTGCAAGCTCTACTTCCGAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGCTCATCTGGCGCCTaGGCTGTATACCGTTTGATC +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSSSSGA*AVYRLI
Trigger: GATCAAACGGTATACAGCCCAGGCGCCAGATGAGCT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAAAGGACAGCTCATCTaGCGCCTGGGCTGTATACCG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGKGQLI*RLGCIP
Trigger: CGGTATACAGCCCAGGCGCCAGATGAGCTGTCCTTT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGTTCCACACACTCACTaGGGAAGAACCCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGVPHTH*GRTRPG
Trigger: TCCAGGTCGGGTTCTTCCCCAGTGAGTGTGTGGAAC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCGTGCCGAAGCCTCTaGATGTTGGAAGACACGCCT +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSCRSL*MLEDTP
Trigger: AGGCGTGTCTTCCAACATCCAGAGGCTTCGGCACGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGGGAGGACACGCTGTaGATGTCCTGCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRREDTL*MSCRNA
Trigger: TGCATTCCTGCAGGACATCCACAGCGTGTCCTCCCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCATGCATGCTGGTGTTaGCACTGTGTCTCGCCATGC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGHACWC*HCVSPC
Trigger: GCATGGCGAGACACAGTGCCAACACCAGCATGCATG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR TCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACTGACATGGCCTCACTaGACTTCCCATAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRLTWPH*TSHRAG
Trigger: ACCAGCTCTATGGGAAGTTCAGTGAGGCCATGTCAG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCAAATATGCACCGGTaGAGGTGGGCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSNMHR*RWASRE
Trigger: TTCCCTGGATGCCCACCTCCACCGGTGCATATTTGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATCAAATATGCACCGGTaGAGGTGGGCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSNMHR*RWASRE
Trigger: TTCCCTGGATGCCCACCTCCACCGGTGCATATTTGA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGCTCATCTGGCGCCTaGGCTGTATACCGTTTGATC +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSSSGA*AVYRLI
Trigger: GATCAAACGGTATACAGCCCAGGCGCCAGATGAGCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAACAGGACGTCCACATaGGTGAGCAGAAACTCCACC +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGNRTST*VSRNST
Trigger: GGTGGAGTTTCTGCTCACCCATGTGGACGTCCTGTT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGACAAAGTTAGAAACCTaGGGTAGTGGTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRTKLET*GSGRGS
Trigger: TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAACAAAGTTAGAAACCTaGGGTAGTGGTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSTKLET*GSGRGS
Trigger: TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACAAAGTTAGAAACCTaGGGTAGTGGTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTKLET*GSGRGS
Trigger: TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACAAAGTTAGAAACCTaGGGTAGTGGTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTKLET*GSGRGS
Trigger: TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAATTAATGTTGTCAGATaGTTTAGTGGGGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSINVVR*FSGACG
Trigger: CCCACATGCCCCACTAAACCATCTGACAACATTAAT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CCA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTATTAATGTTGTCAGATaGTTTAGTGGGGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGINVVR*FSGACG
Trigger: CCCACATGCCCCACTAAACCATCTGACAACATTAAT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS CCA 90 bp GTTGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCTaGGCTTCCTCCAGCGTCAGCAGGCGGGTGGAGGGGCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VVGSVGVPSRPWVRA*ASSSVSRRVEGQLP
Trigger: GGGCAGCTGCCCCTCCACCCGCCTGCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS GCA 90 bp GGGAGTTGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGCGTaGCTGGGCTTCCTCCAGCGTCAGCAGGCGGGTGGAGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GSCGLRGRPQPALGA*LGFLQRQQAGGGAA
Trigger: AGCTGCCCCTCCACCCGCCTGCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 90 bp GGGTCTGCTGCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSAAFPQVRPGPWEL*APWASPAGPGCVPG
Trigger: CCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGCAGCAGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS TCA 90 bp GGATTCCCCGCTGCCGCAGCCGCTGCCGAGAAGGGCGGGAGCGCATaGAGGTGCGGAGCAGGCCGGCCAGCTTCCCACGAGGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: GFPAAAAAAEKGGSA*RCGAGRPASHEAVA
Trigger: TGCCACGGCCTCGTGGGAAGCTGGCCGGCCTGCTCCGCACCTTCATGCGCTCCCGCCCTTCTCGGCAGCGGCTGCGGCAGCGGGGAATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CCA 90 bp GCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTTGTGGGCTCCGTaGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCTGGGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AFPQVRPGPWELWAP*ASPAGPGCVPGLPP
Trigger: TGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS GCA 90 bp GGACCGAGTGGGCCCTGGGCTCCCCGGAGCTTGCTGCACATCTCCTaGTGGCAGGCGTCAGTCAGCGGGGCCTCGGCTCCTCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPSGPWAPRSLLHIS*WQASVSGASAPRSS
Trigger: GCTGCTGCGAGGAGCCGAGGCCCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS CCA 90 bp TCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTTGTGGGCTCCGTaGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCTGGGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SFPQVRPGPWELWAP*ASPAGPGCVPGLPP
Trigger: TGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000593034.5
CDS CCA 90 bp GAGCCAGCAGGTGCTGGGCCCACAGGGAAAGCGTCGCTGCTGGAGTaGGGTCGCCGCAGCCTGTGCAGCCTCTGGAGGCCAGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: EPAGAGPTGKASLLE*GRRSLCSLWRPAPL
Trigger: CAGCGGGGCTGGCCTCCAGAGGCTGCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTGTGGGCCCAGCACCTGCTGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 90 bp CCTGCAGCCCTGATCGTGGTGGGCAGTAGCCAGGACCTCAGGGGGTaGGAGGGCATACCTGCAGGGTCGAGGCCGGCGGAGGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PAALIVVGSSQDLRG*EGIPAGSRPAEVKV
Trigger: CACCTTCACCTCCGCCGGCCTCGACCCTGCAGGTATGCCCTCCCACCCCCTGAGGTCCTGGCTACTGCCCACCACGATCAGGGCTGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601474.5
CDS GCA 90 bp ACTCCATATCAGGACCGAGTGGGCCCTGGGCTCCCCGGAGCTTGCTaGACATCTCCTGCTGGCAGGCGTCAGTCAGCGGGGCCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: TPYQDRVGPGLPGAC*TSPAGRRQSAGPRL
Trigger: GAGCCGAGGCCCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCCTGATATGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS GCA 90 bp CAGCAGCGCAGCACCTGGGGCACATCCTGGCCTGAGTTGCTGAGGTaGTCGCCAAGATCGCAGCCAAACACCCTCTGTCGCAGGATTCCC +
Preference number: 5 (lower is better)
Translates to: QQRSTWGTSWPELLR*SPRSQPNTLCRRIP
Trigger: GGGAATCCTGCGACAGAGGGTGTTTGGCTGCGATCTTGGCGAGCACCTCAGCAACTCAGGCCAGGATGTGCCCCAGGTGCTGCGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS GCA 90 bp AACAGGACGTCCACATGGGTGAGCAGAAACTCCACCACCACCGACTaGACCCGAACTTCCCGGAACGCCGCCGCGCCACCCATTCCCACT +
Preference number: 5 (lower is better)
Translates to: NRTSTWVSRNSTTTD*TRTSRNAAAPPIPT
Trigger: AGTGGGAATGGGTGGCGCGGCGGCGTTCCGGGAAGTTCGGGTGCAGTCGGTGGTGGTGGAGTTTCTGCTCACCCATGTGGACGTCCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000591438.1
ENST00000601474.5
CDS GCA 90 bp GTAGAGGCTGCACCGAGCCCTCCCCTGGGCCATCCAGGCTGTCAGTaGTGCGTGCCTGTAGAGCAGAAAGAATCAGAGGCCCCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: VEAAPSPPLGHPGCQ*CVPVEQKESEAPRD
Trigger: ATCTCTGGGGGCCTCTGATTCTTTCTGCTCTACAGGCACGCAGCACTGACAGCCTGGATGGCCCAGGGGAGGGCTCGGTGCAGCCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221905.1
CDS GCA 90 bp GGGGCGGGGGAAGCTCCGGAAGGCAGGAGAACCTCCGGTCAAATATaGACCGGTGGAGGTGGGCATCCAGGGAACGAAAGTCATCGTAAC +
Preference number: 5 (lower is better)
Translates to: GAGEAPEGRRTSGQI*TGGGGHPGNESHRN
Trigger: GTTACGATGACTTTCGTTCCCTGGATGCCCACCTCCACCGGTGCATATTTGACCGGAGGTTCTCCTGCCTTCCGGAGCTTCCCCCGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000221905.1
ENST00000314737.9
ENST00000378944.9
CDS GCA 90 bp CAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTaGAGCAGCAGTGGCACCAGCATCTGGGCAGCCCTGGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: QLRLLSTSPDSVSRY*SSSGTSIWAALAPS
Trigger: CGAGGGTGCCAGGGCTGCCCAGATGCTGGTGCCACTGCTGCTGCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000221905.1
ENST00000314737.9
ENST00000378944.9
CDS TCA 90 bp ATACCGTTTGATCACATGGGCGGCCGCCACTGCAGGGATATTGAGTaGCGCCTCCTCACTGAGGAGCAGTCGCCGGCCGTGATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: IPFDHMGGRHCRDIE*RLLTEEQSPAVIVQ
Trigger: CTGGACAATCACGGCCGGCGACTGCTCCTCAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS GCA 90 bp CGAGGACGCTCCGCCCATGGACGTTTCTCGTTGCCTCATATACCTTaGCTAGGACGTAACCCGAGGCTTTCTGCGATTTGGCCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: RGRSAHGRFSLPHIP*LGRNPRLSAIWPPL
Trigger: CAGGGGAGGCCAAATCGCAGAAAGCCTCGGGTTACGTCCTAGGCAAGGTATATGAGGCAACGAGAAACGTCCATGGGCGGAGCGTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589133.5
CDS CCA 90 bp AAGGACAGCTCATCTGGCGCCTGGGCTGTATACCGTTTGATCACATaGGCGGCCGCCACTGCAGGGATATTGAGTGACGCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: KDSSSGAWAVYRLIT*AAATAGILSDASSL
Trigger: CAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTATACAGCCCAGGCGCCAGATGAGCTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp GGCCCGCAGTTGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCCAGGTACTGCAGCACAGGCCCGCAGTaGAGGTTACTGTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: GPQLRLLSTSPDSVSRYCSTGPQ*RLLSTS
Trigger: ACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCT...GCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590893.5
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCTGCCCGCAAGGGACTaGGGCCTGGGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRLPARD*GLGSRQ
Trigger: CTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCAG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTGCCCGCAAGGGACTaGGGCCTGGGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLPARD*GLGSRQ
Trigger: CTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCCGGGGCCTTGGGAGTaGTGGGCTCCGTGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGPGPWE*WAPWAS
Trigger: GGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCGGGGCCTTGGGAGTaGTGGGCTCCGTGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPGPWE*WAPWAS
Trigger: GGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGTGAGGCCGGGGCCTaGGGAGTTGTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGEAGA*GVVGSV
Trigger: CACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTCCCCAGGGTGCCCGTaGTTTCTGGGGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSPGCP*FLGKAG
Trigger: CCCCGCCTTCCCCAGAAACAACGGGCACCCTGGGGA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTGCCCGCAAGGGACTaGGGCCTGGGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLPARD*GLGSRQ
Trigger: CTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGTGAGGCCGGGGCCTaGGGAGTTGTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGEAGA*GVVGSV
Trigger: CACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGGGCTCCCCGGAGCTaGCTGCACATCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRWAPRS*LHISCW
Trigger: CCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGTGTGCTAGGGAGTaGGGAGGTGGCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGCARE*GGGPLP
Trigger: AGGGAGTGGGCCACCTCCCAACTCCCTAGCACACCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACTCGGAGTCCCCTCCTaGAGGTCCCCATGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSLGVPS*RSPWAA
Trigger: AGCGGCCCATGGGGACCTCAAGGAGGGGACTCCGAG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGGTACAAGCCTGGCTaGGGGACCCCGAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRGYKPG*GTPRKG
Trigger: ACCCTTCCTCGGGGTCCCCAAGCCAGGCTTGTACCC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCTCGGAGTCCCCTCCTaGAGGTCCCCATGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGLGVPS*RSPWAA
Trigger: AGCGGCCCATGGGGACCTCAAGGAGGGGACTCCGAG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGGGTACAAGCCTGGCTaGGGGACCCCGAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSGYKPG*GTPRKG
Trigger: ACCCTTCCTCGGGGTCCCCAAGCCAGGCTTGTACCC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTCCCCAGGGTGCCCGTaGTTTCTGGGGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGSPGCP*FLGKAG
Trigger: CCCCGCCTTCCCCAGAAACAACGGGCACCCTGGGGA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACCTCCCACCCCAGATTaGTGCGAGGGCCCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSPPTPD*CEGPQD
Trigger: ATCCTGGGGGCCCTCGCACAAATCTGGGGTGGGAGG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGTGGGCTGTATACCGTTaGATCACATGGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRWAVYR*ITWAAA
Trigger: GGCGGCCGCCCATGTGATCAAACGGTATACAGCCCA...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCAGACAATGGCCAGGTaGCGGGCATGCATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRQTMAR*RACMLV
Trigger: CACCAGCATGCATGCCCGCAACCTGGCCATTGTCTG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGATGGACCGTAGCAGGTaGGGTGCCCAGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRMDRSR*GAQTMA
Trigger: GGCCATTGTCTGGGCACCCAACCTGCTACGGTCCAT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTGGGCTCCCCGGAGCTaGCTGCACATCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGWAPRS*LHISCW
Trigger: CCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGTGTGCTAGGGAGTaGGGAGGTGGCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGCARE*GGGPLP
Trigger: AGGGAGTGGGCCACCTCCCAACTCCCTAGCACACCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAGGGTACAAGCCTGGCTaGGGGACCCCGAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRGYKPG*GTPRKG
Trigger: ACCCTTCCTCGGGGTCCCCAAGCCAGGCTTGTACCC...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACCTCCCACCCCAGATTaGTGCGAGGGCCCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRPPTPD*CEGPQD
Trigger: ATCCTGGGGGCCCTCGCACAAATCTGGGGTGGGAGG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGCACAGGCCCGCAGTaGAGGTTACTGTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRSTGPQ*RLLSTS
Trigger: ACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCCACTGCAGGGATATaGAGTGACGCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRATAGI*SDASSL
Trigger: CAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCATGGGCTGTATACCGTTaGATCACATGGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSWAVYR*ITWAAA
Trigger: GGCGGCCGCCCATGTGATCAAACGGTATACAGCCCA...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCGAAGCCTCTGGATGTaGGAAGACACGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRSLWM*EDTPES
Trigger: GCTCTCAGGCGTGTCTTCCAACATCCAGAGGCTTCG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGCATGCATGCTGGTGTaGGCACTGTGTCTCGCCATG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRACMLV*ALCLAM
Trigger: CATGGCGAGACACAGTGCCAACACCAGCATGCATGC...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACAGACAATGGCCAGGTaGCGGGCATGCATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSQTMAR*RACMLV
Trigger: CACCAGCATGCATGCCCGCAACCTGGCCATTGTCTG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAATGGACCGTAGCAGGTaGGGTGCCCAGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSMDRSR*GAQTMA
Trigger: GGCCATTGTCTGGGCACCCAACCTGCTACGGTCCAT...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCACGAAGCCTCTGGATGTaGGAAGACACGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSRSLWM*EDTPES
Trigger: GCTCTCAGGCGTGTCTTCCAACATCCAGAGGCTTCG...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp CCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAGCATGCATGCTGGTGTaGGCACTGTGTCTCGCCATG +
Preference number: 5 (lower is better)
Translates to: PHQKQVTKLETWGSGRGSACMLV*ALCLAM
Trigger: CATGGCGAGACACAGTGCCAACACCAGCATGCATGC...TGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGACAGACAATGGCCAGGTaGCGGGCATGCATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRQTMAR*RACMLV
Trigger: CACCAGCATGCATGCCCGCAACCTGGCCATTGTCTG...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTATGGACCGTAGCAGGTaGGGTGCCCAGACAATGGCC +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGMDRSR*GAQTMA
Trigger: GGCCATTGTCTGGGCACCCAACCTGCTACGGTCCAT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRRDSSL*ADLSVT
Trigger: CGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCT...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGCACAGGCCCGCAGTaGAGGTTACTGTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRSTGPQ*RLLSTS
Trigger: ACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCCACTGCAGGGATATaGAGTGACGCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGATAGI*SDASSL
Trigger: CAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAACATCCTGGCCTGAGTaGCTGAGGTGCTCGCCAAGA +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRTSWPE*LRCSPR
Trigger: TCTTGGCGAGCACCTCAGCAACTCAGGCCAGGATGT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTACATCCTGGCCTGAGTaGCTGAGGTGCTCGCCAAGA +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGTSWPE*LRCSPR
Trigger: TCTTGGCGAGCACCTCAGCAACTCAGGCCAGGATGT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGAAGCCTCTGGATGTaGGAAGACACGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRSLWM*EDTPES
Trigger: GCTCTCAGGCGTGTCTTCCAACATCCAGAGGCTTCG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTGCATGCATGCTGGTGTaGGCACTGTGTCTCGCCATG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGACMLV*ALCLAM
Trigger: CATGGCGAGACACAGTGCCAACACCAGCATGCATGC...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp AGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGCATCACTTTGTTGCCTaGGTAAGTAGGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: RDPHQKQVTKLETWGSGRHHFVA*VSRVGV
Trigger: GACCCCCACCCTACTTACCAAGGCAACAAAGTGATG...CCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGRDSSL*ADLSVT
Trigger: CGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCT...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGAAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACG +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRRDSSL*ADLSVT
Trigger: CGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCT...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCATCACTTTGTTGCCTaGGTAAGTAGGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGHHFVA*VSRVGV
Trigger: GACCCCCACCCTACTTACCAAGGCAACAAAGTGATG...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp GTTAGGGACCCACATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTTACAAAACAAGGGATTaGGTTGGGCCAAGATCCAGT +
Preference number: 5 (lower is better)
Translates to: VRDPHQKQVTKLETWGSGYKTRD*VGPRSS
Trigger: ACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGTA...ACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATGTGGGTCCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS-3UTR CAA 90 bp CATCAGAAGCAAGTTACAAAGTTAGAAACCTGGGGTAGTGGTCGGGGTTCAAGATACAAAACAAGGGATTaGGTTGGGCCAAGATCCAGT +
Preference number: 5 (lower is better)
Translates to: HQKQVTKLETWGSGRGSRYKTRD*VGPRSS
Trigger: ACTGGATCTTGGCCCAACCAAATCCCTTGTTTTGTA...TCTTGAACCCCGACCACTACCCCAGGTTTCTAACTTTGTAACTTGCTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
CDS CCA 72 bp TCCGTGGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCTaGGCTTCCTCCAGCGTCAGCAGGCGGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SVGVPSRPWVRA*ASSSVSRRVEG
Trigger: CCCCTCCACCCGCCTGCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS GCA 72 bp CGCGCTCGACCCCTCGCTCGCCGTTCTCGTCGCCGCTaGCGCCGCCATGGCGACACAAAGGGGAGGGCGCGA +
Preference number: 6 (lower is better)
Translates to: RARPLARRSRRR*RRHGDTKGRAR
Trigger: TCGCGCCCTCCCCTTTGTGTCGCCATGGCGGCGGCAGCGGCGACGAGAACGGCGAGCGAGGGGTCGAGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378944.9
ENST00000590893.5
CDS CCA 72 bp GCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: AFPQVRPGPWEL*APWASPAGPGC
Trigger: GCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS CAA 72 bp GCTGCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTaGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: AAFPQVRPGPWE*WAPWASPAGPG
Trigger: CCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS TCA 72 bp GCTGCCGCAGCCGCTGCCGAGAAGGGCGGGAGCGCATaGAGGTGCGGAGCAGGCCGGCCAGCTTCCCACGAG +
Preference number: 6 (lower is better)
Translates to: AAAAAAEKGGSA*RCGAGRPASHE
Trigger: CTCGTGGGAAGCTGGCCGGCCTGCTCCGCACCTTCATGCGCTCCCGCCCTTCTCGGCAGCGGCTGCGGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CCA 72 bp GGAGTTGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTaGGTGCGTGCCTGGGCTTCCTCCAGCGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GVVGSVGVPSRP*VRAWASSSVSR
Trigger: CCTGCTGACGCTGGAGGAAGCCCAGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp TCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTTGTaGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: SFPQVRPGPWEL*APWASPAGPGC
Trigger: GCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp GGGTCTGCTGCCTTTCCGCAGGTGAGGCCGGGGCCTTaGGAGTTGTGGGCTCCGTGGGCGTCCCCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: GSAAFPQVRPGP*ELWAPWASPAG
Trigger: GCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGCAGCAGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS CAA 72 bp TCCTCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTaGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: SSFPQVRPGPWE*WAPWASPAGPG
Trigger: CCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000593034.5
CDS CAA 72 bp GGTCCCGGGACCCAGGCACCCGGGTGTGCTAGGGAGTaGGGAGGTGGCCCACTCCCTGAGGTCCCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GPGTQAPGCARE*GGGPLPEVPRG
Trigger: GCCCCTGGGGACCTCAGGGAGTGGGCCACCTCCCAACTCCCTAGCACACCCGGGTGCCTGGGTCCCGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS CAA 72 bp CGGGTCTGCTGCCTTTCCGCAGGTGAGGCCGGGGCCTaGGGAGTTGTGGGCTCCGTGGGCGTCCCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: RVCCLSAGEAGA*GVVGSVGVPSR
Trigger: CCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGCAGCAGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS CAA 90 bp GTCGGGTCTGCTGCCTTTCCGCAGGTGAGGCCGGGGCCTTGGGAGTaGTGGGCTCCGTGGGCGTCCCCAGCCGGCCCTGGGTGCGTGCCT +
Preference number: 6 (lower is better)
Translates to: VGSAAFPQVRPGPWE*WAPWASPAGPGCVP
Trigger: AGGCACGCACCCAGGGCCGGCTGGGGACGCCCACGGAGCCCACAACTCCCAAGGCCCCGGCCTCACCTGCGGAAAGGCAGCAGACCCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS GCA 72 bp CTTCCTCCAGCGTCAGCAGGCGGGTGGAGGGGCAGCTaGCCGCAAGGGACTTGGGCCTGGGGAGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPPASAGGWRGS*PQGTWAWGAGS
Trigger: GCTGCCTGCTCCCCAGGCCCAAGTCCCTTGCGGGCAGCTGCCCCTCCACCCGCCTGCTGACGCTGGAGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp CCCTGGGCTCCCCGGAGCTTGCTGCACATCTCCTGCTaGCAGGCGTCAGTCAGCGGGGCCTCGGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: PWAPRSLLHISC*QASVSGASAPR
Trigger: GCGAGGAGCCGAGGCCCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS CCA 72 bp GTCCCGGGACCCAGGCACCCGGGTGTGCTAGGGAGTTaGGAGGTGGCCCACTCCCTGAGGTCCCCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: VPGPRHPGVLGS*EVAHSLRSPGA
Trigger: AGCCCCTGGGGACCTCAGGGAGTGGGCCACCTCCCAACTCCCTAGCACACCCGGGTGCCTGGGTCCCGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS GCA 72 bp AAAGCGTCGCTGCTGGAGTGGGGTCGCCGCAGCCTGTaGAGCCTCTGGAGGCCAGCCCCGCTGGCCTGCGAT +
Preference number: 6 (lower is better)
Translates to: KASLLEWGRRSL*SLWRPAPLACD
Trigger: ATCGCAGGCCAGCGGGGCTGGCCTCCAGAGGCTGCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp GGTGCTGGGCCCACAGGGAAAGCGTCGCTGCTGGAGTaGGGTCGCCGCAGCCTGTGCAGCCTCTGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GAGPTGKASLLE*GRRSLCSLWRP
Trigger: TGGCCTCCAGAGGCTGCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTGTGGGCCCAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS GCA 72 bp AGCCAGCAGGTGCTGGGCCCACAGGGAAAGCGTCGCTaGTGGAGTGGGGTCGCCGCAGCCTGTGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SQQVLGPQGKRR*WSGVAAACAAS
Trigger: AGAGGCTGCACAGGCTGCGGCGACCCCACTCCAGCAGCGACGCTTTCCCTGTGGGCCCAGCACCTGCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp CAGAGACGAGATACCCTGGGGAGCCGGGATGCCACATaGGGGGCCATCGGCATCCGCCTTCAGGCCCGGACC +
Preference number: 6 (lower is better)
Translates to: QRRDTLGSRDAT*GAIGIRLQART
Trigger: GGTCCGGGCCTGAAGGCGGATGCCGATGGCCCCCCATGTGGCATCCCGGCTCCCCAGGGTATCTCGTCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CCA 72 bp CTGATCGTGGTGGGCAGTAGCCAGGACCTCAGGGGGTaGGAGGGCATACCTGCAGGGTCGAGGCCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LIVVGSSQDLRG*EGIPAGSRPAE
Trigger: CTCCGCCGGCCTCGACCCTGCAGGTATGCCCTCCCACCCCCTGAGGTCCTGGCTACTGCCCACCACGATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601474.5
CDS CAA 90 bp GGTGACTCCATATCAGGACCGAGTGGGCCCTGGGCTCCCCGGAGCTaGCTGCACATCTCCTGCTGGCAGGCGTCAGTCAGCGGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: GDSISGPSGPWAPRS*LHISCWQASVSGAS
Trigger: CGAGGCCCCGCTGACTGACGCCTGCCAGCAGGAGATGTGCAGCAAGCTCCGGGGAGCCCAGGGCCCACTCGGTCCTGATATGGAGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS CAA 90 bp CCATGGGCCGCTGGCTCCTCAGCAGGCTCCCATCACTTTGTTGCCTaGGTAAGTAGGGTGGGGGTCCCGGGACCCAGGCACCCGGGTGTG +
Preference number: 6 (lower is better)
Translates to: PWAAGSSAGSHHFVA*VSRVGVPGPRHPGV
Trigger: CACACCCGGGTGCCTGGGTCCCGGGACCCCCACCCTACTTACCAAGGCAACAAAGTGATGGGAGCCTGCTGAGGAGCCAGCGGCCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS TCA 72 bp CCAGCCCCCGGAGTCCCTCCAGGCAGCGGGGTGGGCTaGAGTCCAGCTCATCACCATCATCTAGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: PAPGVPPGSGVG*SPAHHHHLARL
Trigger: CAGCCTGGCTAGATGATGGTGATGAGCTGGACTTCAGCCCACCCCGCTGCCTGGAGGGACTCCGGGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
CDS TCA 72 bp GATCACATGGGCGGCCGCCACTGCAGGGATATTGAGTaGCGCCTCCTCACTGAGGAGCAGTCGCCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: DHMGGRHCRDIE*RLLTEEQSPAV
Trigger: CACGGCCGGCGACTGCTCCTCAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS GCA 72 bp AGCCTGTGCAGCCTCTGGAGGCCAGCCCCGCTGGCCTaGGATGACAGAGACTCCTCGCTCTTGGCAGATCTC +
Preference number: 6 (lower is better)
Translates to: SLCSLWRPAPLA*DDRDSSLLADL
Trigger: GAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGGCCTCCAGAGGCTGCACAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CAA 90 bp TGGAGGCCAGCCCCGCTGGCCTGCGATGACAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACGGTGTCGGGTCTGCTGCCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: WRPAPLACDDRDSSL*ADLSVTVSGLLPEG
Trigger: GCCTTCAGGCAGCAGACCCGACACCGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000593034.5
CDS CAA 90 bp TGGAGGCCAGCCCCGCTGGCCTGCGATGACAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACGGTGTCGGGTCTGCTGCCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: WRPAPLACDDRDSSL*ADLSVTVSGLLPFR
Trigger: GCGGAAAGGCAGCAGACCCGACACCGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS TCA 72 bp GTGCAGCCTCTGGAGGCCAGCCCCGCTGGCCTGCGATaGCAGAGACTCCTCGCTCTTGGCAGATCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: VQPLEASPAGLR*QRLLALGRSQC
Trigger: ACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGGCCTCCAGAGGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS TCA 72 bp CCCAGCCCCCAGCAGTTCAGCCCCGCTGGCCTGCGATaGCAGAGACTCCTCGCTCTTGGCAGATCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: PSPQQFSPAGLR*QRLLALGRSQC
Trigger: ACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGCTGAACTGCTGGGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314737.9
CDS CCA 72 bp CCTCGGAGTCCCCTCCTTGAGGTCCCCATGGGCCGCTaGCTCCTCAGCAGGCTCCCATCACTTTGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: PRSPLLEVPMGR*LLSRLPSLCCL
Trigger: AAGGCAACAAAGTGATGGGAGCCTGCTGAGGAGCCAGCGGCCCATGGGGACCTCAAGGAGGGGACTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS CAA 72 bp GCCCCGCTGGCCTGCGATGACAGAGACTCCTCGCTCTaGGCAGATCTCAGTGTGACGGTGTCGGGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: APLACDDRDSSL*ADLSVTVSGLL
Trigger: CAGCAGACCCGACACCGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCATCGCAGGCCAGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000587984.1
ENST00000588248.6
ENST00000593034.5
CDS CAA 72 bp GCTGGCTCCTCAGCAGGCTCCCATCACTTTGTTGCCTaGGTAAGTAGGGTGGGGGTCCCGGGACCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AGSSAGSHHFVA*VSRVGVPGPRH
Trigger: GTGCCTGGGTCCCGGGACCCCCACCCTACTTACCAAGGCAACAAAGTGATGGGAGCCTGCTGAGGAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
CDS TCA 72 bp AGCGCAGCACCTGGGGCACATCCTGGCCTGAGTTGCTaGGGTGCTCGCCAAGATCGCAGCCAAACACCCTCT +
Preference number: 6 (lower is better)
Translates to: SAAPGAHPGLSC*GARQDRSQTPS
Trigger: AGAGGGTGTTTGGCTGCGATCTTGGCGAGCACCTCAGCAACTCAGGCCAGGATGTGCCCCAGGTGCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS GCA 72 bp GCAGAGGGAGGACACGCTGTGGATGTCCTGCAGGAATaGAGGGCCAGACAGCTCCGGGATCCTCTCACTGTC +
Preference number: 6 (lower is better)
Translates to: AEGGHAVDVLQE*RARQLRDPLTV
Trigger: GACAGTGAGAGGATCCCGGAGCTGTCTGGCCCTGCATTCCTGCAGGACATCCACAGCGTGTCCTCCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000588248.6
ENST00000601474.5
CDS CAA 72 bp CGTTTGATCACATGGGCGGCCGCCACTGCAGGGATATaGAGTGACGCCTCCTCACTGAGGAGCAGTCGCCGG +
Preference number: 6 (lower is better)
Translates to: RLITWAAATAGI*SDASSLRSSRR
Trigger: CCGGCGACTGCTCCTCAGTGAGGAGGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CAA 72 bp AGGCCCACCTCCATCCAGGTGAGCACAGGCCCGCAGTaGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RPTSIQVSTGPQ*RLLSTSPDSVS
Trigger: GGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGGTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221905.1
CDS CAA 90 bp CCCACCTCAAAGGACAGCTCATCTGGCGCCTGGGCTGTATACCGTTaGATCACATGGGCGGCCGCCACTGCAGGGATATTGAGTGACGCC +
Preference number: 6 (lower is better)
Translates to: PTSKDSSSGAWAVYR*ITWAAATAGILSDA
Trigger: GGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTATACAGCCCAGGCGCCAGATGAGCTGTCCTTTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS TCA 72 bp ATGACAGAGACTCCTCGCTCTTGGCAGATCTCAGTGTaGCGGTGTCGGGTCTGCTGCCTGAAGGCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: MTETPRSWQISV*RCRVCCLKAAV
Trigger: CACCGCAGCCTTCAGGCAGCAGACCCGACACCGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
ENST00000587447.3
ENST00000588248.6
ENST00000593034.5
CDS CCA 72 bp TCATCTGGCGCCTGGGCTGTATACCGTTTGATCACATaGGCGGCCGCCACTGCAGGGATATTGAGTGACGCC +
Preference number: 6 (lower is better)
Translates to: SSGAWAVYRLIT*AAATAGILSDA
Trigger: GGCGTCACTCAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTATACAGCCCAGGCGCCAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS TCA 72 bp ATGACAGAGACTCCTCGCTCTTGGCAGATCTCAGTGTaGCGGTGTCGGGTCTGCTGCCTTTCCGCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: MTETPRSWQISV*RCRVCCLSAGE
Trigger: CTCACCTGCGGAAAGGCAGCAGACCCGACACCGTCACACTGAGATCTGCCAAGAGCGAGGAGTCTCTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587984.1
CDS GCA 72 bp GAAGCTCCGGAAGGCAGGAGAACCTCCGGTCAAATATaGACCGGTGGAGGTGGGCATCCAGGGAACGAAAGT +
Preference number: 6 (lower is better)
Translates to: EAPEGRRTSGQI*TGGGGHPGNES
Trigger: ACTTTCGTTCCCTGGATGCCCACCTCCACCGGTGCATATTTGACCGGAGGTTCTCCTGCCTTCCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007510.8
ENST00000221905.1
ENST00000314737.9
ENST00000378944.9
CDS CCA 72 bp GACCCCGCTCACATAATGCCGAGGACGCTCCGCCCATaGACGTTTCTCGTTGCCTCATATACCTTGCCTAGG +
Preference number: 6 (lower is better)
Translates to: DPAHIMPRTLRP*TFLVASYTLPR
Trigger: CCTAGGCAAGGTATATGAGGCAACGAGAAACGTCCATGGGCGGAGCGTCCTCGGCATTATGTGAGCGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589133.5
CDS CAA 72 bp TTGTCCAGCTCCATCCAGGTGAGCACAGGCCCGCAGTaGAGGTTACTGTCCACCAGTCCTGACAGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSSSIQVSTGPQ*RLLSTSPDSVS
Trigger: GGAGACACTGTCAGGACTGGTGGACAGTAACCTCAACTGCGGGCCTGTGCTCACCTGGATGGAGCTGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CAA 72 bp AAGGACAGCTCATCTGGCGCCTGGGCTGTATACCGTTaGATCACATGGGCGGCCGCCACTGCAGGGATATTG +
Preference number: 6 (lower is better)
Translates to: KDSSSGAWAVYR*ITWAAATAGIL
Trigger: CAATATCCCTGCAGTGGCGGCCGCCCATGTGATCAAACGGTATACAGCCCAGGCGCCAGATGAGCTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007510.8
ENST00000314737.9
ENST00000378944.9
CDS CCA 72 bp CCTTGCCTAGGACGTAACCCGAGGCTTTCTGCGATTTaGCCTCCCCTGCCCACTGGACATTTTCTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: PCLGRNPRLSAI*PPLPTGHFLVS
Trigger: GGAAACAAGAAAATGTCCAGTGGGCAGGGGAGGCCAAATCGCAGAAAGCCTCGGGTTACGTCCTAGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589133.5
CDS GCA 72 bp TCCGCCCATGGACGTTTCTCGTTGCCTCATATACCTTaGCTAGGACGTAACCCGAGGCTTTCTGCGATTTGG +
Preference number: 6 (lower is better)
Translates to: SAHGRFSLPHIP*LGRNPRLSAIW
Trigger: CCAAATCGCAGAAAGCCTCGGGTTACGTCCTAGGCAAGGTATATGAGGCAACGAGAAACGTCCATGGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589133.5