RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP32 (Homo sapiens)

Ensembl gene IDs: ENSG00000134909

Ensembl transcript IDs: ENST00000310343.13, ENST00000392657.7, ENST00000524655.5, ENST00000525234.1, ENST00000526162.5, ENST00000527272.1, ENST00000533509.1, ENST00000534357.1, ENST00000682385.1

Found 1241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGAAAGCCACAGGGATGCGCAGGGACAGACTCGGCGCGCAGGTaGAGCAGCGGGACCCGGGCACCGTCCCGCACTTTCTCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: AGKPQGCAGTDSARR*SSGTRAPSRTFSGR
Trigger: CCTGCCTGAGAAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTCCCTGCGCATCCCTGTGGCTTTCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp CAGCAGCGGGACCCGGGCACCGTCCCGCACTTTCTCAGGCAGGCCTaGCTGGACAGCTGTAGCCATGGGACACTGAGCAGCAGCAGCACC +
Preference number: 1 (lower is better)
Translates to: QQRDPGTVPHFLRQA*LDSCSHGTLSSSST
Trigger: GGTGCTGCTGCTGCTCAGTGTCCCATGGCTACAGCTGTCCAGCCAGGCCTGCCTGAGAAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp CAGCCCATGTCAGGAAGCTTCCTGCTCCTCAGGCTGCTCTGCTTCTaGGGCAGGGATGGCTTCTCCGGCTGCGTGCTACCATGGCCTCCG +
Preference number: 1 (lower is better)
Translates to: QPMSGSFLLLRLLCF*GRDGFSGCVLPWPP
Trigger: CGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGAAGCTTCCTGACATGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CTGCGTGCTACCATGGCCTCCGTGATGGTGGGCTCTGTCCATCTCTaGCTCGGGATGCCTCCTATAGAAGCGGTCCTCTCCCTCGGGACT +
Preference number: 1 (lower is better)
Translates to: LRATMASVMVGSVHL*LGMPPIEAVLSLGT
Trigger: AGTCCCGAGGGAGAGGACCGCTTCTATAGGAGGCATCCCGAGGCAGAGATGGACAGAGCCCACCATCACGGAGGCCATGGTAGCACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp TCAGGCTGCTCTGCTTCTGAGGCAGGGATGGCTTCTCCGGCTGCGTaGTACCATGGCCTCCGTGATGGTGGGCTCTGTCCATCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: SGCSASEAGMASPAA*YHGLRDGGLCPSLP
Trigger: AGGCAGAGATGGACAGAGCCCACCATCACGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CAGGAAGACTGCAGCCCATGTCAGGAAGCTTCCTGCTCCTCAGGCTaGTCTGCTTCTGAGGCAGGGATGGCTTCTCCGGCTGCGTGCTAC +
Preference number: 1 (lower is better)
Translates to: QEDCSPCQEASCSSG*SASEAGMASPAACY
Trigger: GTAGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGAAGCTTCCTGACATGGGCTGCAGTCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp GTGCCCTGTGCTCAGGAAGACTGCAGCCCATGTCAGGAAGCTTCCTaGTCCTCAGGCTGCTCTGCTTCTGAGGCAGGGATGGCTTCTCCG +
Preference number: 1 (lower is better)
Translates to: VPCAQEDCSPCQEAS*SSGCSASEAGMASP
Trigger: CGGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGAAGCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACAGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp CCAAGTCGTCCTGCACCGCCGGGGTCATGTTATCATATTGGGACATaGCAGGCCCTTTCACCTTCTGCCGAGCACGGCTCTCTCTCCGGA +
Preference number: 1 (lower is better)
Translates to: PSRPAPPGSCYHIGT*QALSPSAEHGSLSG
Trigger: TCCGGAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGGACGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp TGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCTGGTaGGGGGCAGTGGTGCAGGAAAGCCACAGGGATGCGCAGGGACAG +
Preference number: 1 (lower is better)
Translates to: CWSVWQQSSYSPSSW*GAVVQESHRDAQGQ
Trigger: CTGTCCCTGCGCATCCCTGTGGCTTTCCTGCACCACTGCCCCCCACCAGGATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp ATCCCACCCAAGTCGTCCTGCACCGCCGGGGTCATGTTATCATATTaGGACATGACAGGCCCTTTCACCTTCTGCCGAGCACGGCTCTCT +
Preference number: 1 (lower is better)
Translates to: IPPKSSCTAGVMLSY*DMTGPFTFCRARLS
Trigger: AGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGGACGACTTGGGTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp TACTGGGACACAACAGTCACACTGCTCTGGCGCTTGCCGTGTGGTTaGTACTGGTACAGCACACTGGGGTCCCTCTCCACGTTCTGGGTA +
Preference number: 1 (lower is better)
Translates to: YWDTTVTLLWRLPCG*YWYSTLGSLSTFWV
Trigger: TACCCAGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CCAGGTTATCATACTGGGACACAACAGTCACACTGCTCTGGCGCTTaGCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: PGYHTGTQQSHCSGA*RVVGTGTAHWGPSP
Trigger: TGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGATAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp GACCCGGCTGCATGGCTTGGAGTGGTGTCCAGATGCGTTTCTTCCTaGGGCCACATATGTGTTATAACGAAGACCCATGGAGGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: DPAAWLGVVSRCVSS*GHICVITKTHGGWW
Trigger: CCACCAGCCTCCATGGGTCTTCGTTATAACACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp CGGCGGAGCATGGAGAGACTGCACTCTCCGGATGGTAGGGTACGGTaGAATGTCTTCGGGGTAACAGGTATTCCTGACAGAGGAGCTCAA +
Preference number: 1 (lower is better)
Translates to: RRSMERLHSPDGRVR*NVFGVTGIPDRGAQ
Trigger: TTGAGCTCCTCTGTCAGGAATACCTGTTACCCCGAAGACATTCCACCGTACCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp GGGGGCCCATTCTTTGACTCACAGAACTGCCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGAAGACTGCAGCCCATGTCAGGAAGC +
Preference number: 1 (lower is better)
Translates to: GGPFFDSQNCLWLAS*CALCSGRLQPMSGS
Trigger: GCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAATGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp ATCATACTGGGACACAACAGTCACACTGCTCTGGCGCTTGCCGTGTaGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCACGTTCTG +
Preference number: 1 (lower is better)
Translates to: IILGHNSHTALALAV*LVLVQHTGVPLHVL
Trigger: CAGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp TCTTGGGCAGTAGGCTGGCTCATCATCTGGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGAATCATGGAAGACGGCGGAGCATGGAG +
Preference number: 1 (lower is better)
Translates to: SWAVGWLIIWGNFCP*NGNRANHGRRRSME
Trigger: CTCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAGCCAGCCTACTGCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp CCTGACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGATGCGTTTCTTCCTGGGGCCACATA +
Preference number: 1 (lower is better)
Translates to: PDRGAQRRHILDPAA*LGVVSRCVSSWGHI
Trigger: TATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp GTCCGTGAAATGGGAACAGAGCGAATCATGGAAGACGGCGGAGCATaGAGAGACTGCACTCTCCGGATGGTAGGGTACGGTGGAATGTCT +
Preference number: 1 (lower is better)
Translates to: VREMGTERIMEDGGA*RDCTLRMVGYGGMS
Trigger: AGACATTCCACCGTACCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCATTTCACGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp GGCAGTAGGCTGGCTCATCATCTGGGGGAACTTCTGTCCGTGAAATaGGAACAGAGCGAATCATGGAAGACGGCGGAGCATGGAGAGACT +
Preference number: 1 (lower is better)
Translates to: GSRLAHHLGELLSVK*EQSESWKTAEHGET
Trigger: AGTCTCTCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAGCCAGCCTACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp GGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAATTTATTGTaGTGGGGAGGTACACTCTGGGGACGGTACTGGCAGTTTGGAGTC +
Preference number: 1 (lower is better)
Translates to: GSDLAPYTWCCSNLL*WGGTLWGRYWQFGV
Trigger: GACTCCAAACTGCCAGTACCGTCCCCAGAGTGTACCTCCCCATCACAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTaGCATAGGCATCCACATCACACAGGGCCCCATCTGGACTGTAAT +
Preference number: 1 (lower is better)
Translates to: QSLDWEGGEGVSTGL*HRHPHHTGPHLDCN
Trigger: ATTACAGTCCAGATGGGGCCCTGTGTGATGTGGATGCCTATGGCACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp TTTGACTCACAGAACTGCCTATGGCTTGCTTCTTGGTGTGCCCTGTaGTCAGGAAGACTGCAGCCCATGTCAGGAAGCTTCCTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: FDSQNCLWLASWCAL*SGRLQPMSGSFLLL
Trigger: GAGGAGCAGGAAGCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp CAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTaGAGTGGTGTCCAGATGCGTTTCTTCCTGGGGCCACATATGTGT +
Preference number: 1 (lower is better)
Translates to: QRSSKKTHTRPGCMA*SGVQMRFFLGPHMC
Trigger: ACACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp ATGGTCGTTGGGAGAGAAATAGCCAGTCACGTTGGCCCGGGGACGTaGAGCCAAACCAGCATAACTGTACAAGCTCTTTCCTTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: MVVGREIASHVGPGT*SQTSITVQALSLQP
Trigger: AGGCTGCAAGGAAAGAGCTTGTACAGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATTTCTCTCCCAACGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp CCCATGAGGTGTAGGTGTGCTTCACATCAGCAGCCGGAGGCATGCTaGCTACATTATGGTCGTTGGGAGAGAAATAGCCAGTCACGTTGG +
Preference number: 1 (lower is better)
Translates to: PMRCRCASHQQPEAC*LHYGRWERNSQSRW
Trigger: CCAACGTGACTGGCTATTTCTCTCCCAACGACCATAATGTAGTCAGCATGCCTCCGGCTGCTGATGTGAAGCACACCTACACCTCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CTTTCACCTTCTGCCGAGCACGGCTCTCTCTCCGGATGGACTGCATaGGGTATTTTTCCATGTCCTCAAGATCCCATGAGGTGTAGGTGT +
Preference number: 1 (lower is better)
Translates to: LSPSAEHGSLSGWTA*GIFPCPQDPMRCRC
Trigger: ACACCTACACCTCATGGGATCTTGAGGACATGGAAAAATACCGCATGCAGTCCATCCGGAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp GGGGTCATGTTATCATATTGGGACATGACAGGCCCTTTCACCTTCTaGCGAGCACGGCTCTCTCTCCGGATGGACTGCATGCGGTATTTT +
Preference number: 1 (lower is better)
Translates to: GVMLSYWDMTGPFTF*RARLSLRMDCMRYF
Trigger: AAAATACCGCATGCAGTCCATCCGGAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp GCCCCTCTTCCTAATCTCCATGCTGCTGGTGAGAACTTACAGGGCTaGTGTGGTCTCCAAGGGGCAATGGGTTGCCTACTTGACAAGAAT +
Preference number: 1 (lower is better)
Translates to: APLPNLHAAGENLQG*CGLQGAMGCLLDKN
Trigger: ATTCTTGTCAAGTAGGCAACCCATTGCCCCTTGGAGACCACACCAGCCCTGTAAGTTCTCACCAGCAGCATGGAGATTAGGAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CCA 90 bp ATGCGTTTCTTCCTGGGGCCACATATGTGTTATAACGAAGACCCATaGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: MRFFLGPHMCYNEDP*RLVALTWHHTLGAA
Trigger: AGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATAACACATATGTGGCCCCAGGAAGAAACGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp AGAGAAGTCCAGTTTTCCCAGGATCTGATTTACTACGCAGATGGATaGCATAGATCCCACCCAAGTCGTCCTGCACCGCCGGGGTCATGT +
Preference number: 1 (lower is better)
Translates to: REVQFSQDLIYYADG*HRSHPSRPAPPGSC
Trigger: ACATGACCCCGGCGGTGCAGGACGACTTGGGTGGGATCTATGTCATCCATCTGCGTAGTAAATCAGATCCTGGGAAAACTGGACTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp GAGTTTGAGGCTATGACTCCTCTCTGGTTTAGGGGGTGGGACGATTaGCTGAGTGAGGTGTTCTTCCTCCTTGTAGCAGTCTCTGGAGTG +
Preference number: 1 (lower is better)
Translates to: EFEAMTPLWFRGWDD*LSEVFFLLVAVSGV
Trigger: CACTCCAGAGACTGCTACAAGGAGGAAGAACACCTCACTCAGTCAATCGTCCCACCCCCTAAACCAGAGAGGAGTCATAGCCTCAAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp AGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCAGATaGGTTTCTTCCTGGGGCCACATATGTGTTATAACGAAGACCCAT +
Preference number: 1 (lower is better)
Translates to: RHILDPAAWLGVVSR*VSSWGHICVITKTH
Trigger: ATGGGTCTTCGTTATAACACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp AGTGGTAATCTTCCAGGTTATCATACTGGGACACAACAGTCACACTaGTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGG +
Preference number: 1 (lower is better)
Translates to: SGNLPGYHTGTQQSH*SGACRVVGTGTAHW
Trigger: CCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGAAGATTACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp GAAGTCACACACAAGGTGGACTGTGCTGAGGTATCCGGCTCACAGTaGTTTGCCATCCGGTTTCCACCCCACAACATTAGAAAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: EVTHKVDCAEVSGSQ*FAIRFPPHNIRKGK
Trigger: CTTTCCCTTTCTAATGTTGTGGGGTGGAAACCGGATGGCAAATCACTGTGAGCCGGATACCTCAGCACAGTCCACCTTGTGTGTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 90 bp ACCTGTAGTGGACCCGGCCATTCTCAAAGTAAGGCTGAAGCTGAGTaGCATGATAATCTGAGCGGGCCTGGGAGGACTGATATGGCTTAT +
Preference number: 1 (lower is better)
Translates to: TCSGPGHSQSKAEAE*HDNLSGPGRTDMAY
Trigger: ATAAGCCATATCAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTTACTTTGAGAATGGCCGGGTCCACTACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp GGCCACATATGTGTTATAACGAAGACCCATGGAGGCTGGTGGCTCTaGCCTGGCACCATACACTTGGTGCTGCTCCAATTTATTGTGATG +
Preference number: 1 (lower is better)
Translates to: GHICVITKTHGGWWL*PGTIHLVLLQFIVM
Trigger: CATCACAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATAACACATATGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp CCGGCCATTCTCAAAGTAAGGCTGAAGCTGAGTGACATGATAATCTaGGCGGGCCTGGGAGGACTGATATGGCTTATATTGGTACAGAGG +
Preference number: 1 (lower is better)
Translates to: PAILKVRLKLSDMII*AGLGGLIWLILVQR
Trigger: CCTCTGTACCAATATAAGCCATATCAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTTACTTTGAGAATGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATaGTCACAGTTTCCTGGTGCATTATTCTGGAGGTGGAACTGCTCT +
Preference number: 1 (lower is better)
Translates to: LEWVGSPVAVVSGRG*SQFPGALFWRWNCS
Trigger: AGAGCAGTTCCACCTCCAGAATAATGCACCAGGAAACTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp TGCACCAAGATAAGAAGGAGGCTGATCTCCACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTT +
Preference number: 1 (lower is better)
Translates to: CTKIRRRLISTVETG*RLVLIQEGDSWHTV
Trigger: AACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGTGGAGATCAGCCTCCTTCTTATCTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp CATATGTGTTATAACGAAGACCCATGGAGGCTGGTGGCTCTGACCTaGCACCATACACTTGGTGCTGCTCCAATTTATTGTGATGGGGAG +
Preference number: 1 (lower is better)
Translates to: HMCYNEDPWRLVALT*HHTLGAAPIYCDGE
Trigger: CTCCCCATCACAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATAACACATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp AAAATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTaGTCGCAGGGCTCATTCTGCATGGATCTGTGTTTCAGGATGCTG +
Preference number: 1 (lower is better)
Translates to: KIEQSTVQQRLLQLY*SQGSFCMDLCFRML
Trigger: CAGCATCCTGAAACACAGATCCATGCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp ATTCAGTTAAAGGCAGTCCTCAGGCTCTTTCAAGCTAGCCCTAGATaGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: IQLKAVLRLFQASPR*QVCPETGFSTGFQH
Trigger: GTGCTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCCTGAGGACTGCCTTTAACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR CCA 90 bp CGCAGGGTCATCCATGGCTCGAGGTTCAGGTGGCCTCTCTGGAACTaGAACTACTCCTTGAACCTATTGAAAGATGATAATACTATGGGT +
Preference number: 1 (lower is better)
Translates to: RRVIHGSRFRWPLWN*NYSLNLLKDDNTMG
Trigger: ACCCATAGTATTATCATCTTTCAATAGGTTCAAGGAGTAGTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCCATGGATGACCCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp GAAGTGGTAAAGGCAATGCATCGTCCACAGAGGTGGATGAAGCAGTaGCAAAGGAATGATAATTTGAACTGCTGGTGGCATCTGCACTGC +
Preference number: 1 (lower is better)
Translates to: EVVKAMHRPQRWMKQ*QRNDNLNCWWHLHC
Trigger: GCAGTGCAGATGCCACCAGCAGTTCAAATTATCATTCCTTTGTCACTGCTTCATCCACCTCTGTGGACGATGCATTGCCTTTACCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp CAAGTTGTGCAGCTACTGAAGGAGAAGCAGGAACACAACAGGGAATaGAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATG +
Preference number: 1 (lower is better)
Translates to: QVVQLLKEKQEHNRE*RRLPGNRCELLSIM
Trigger: CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAGTAGCTGCACAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR CCA 90 bp ACGGTACTGGCAGTTTGGAGTCATATTGAAATGCAAACAGTTATCTaGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGA +
Preference number: 1 (lower is better)
Translates to: TVLAVWSHIEMQTVI*TKGFSGDIGPSKGG
Trigger: TCCTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 90 bp TTACACATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTaGCTGACAGGGCTGAAAACAGAGAAATGGACTTTGCAGGCTCCT +
Preference number: 1 (lower is better)
Translates to: LHILLKQYFANILNG*LTGLKTEKWTLQAP
Trigger: AGGAGCCTGCAAAGTCCATTTCTCTGTTTTCAGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CCA 90 bp TTTATTGTGATGGGGAGGTACACTCTGGGGACGGTACTGGCAGTTTaGAGTCATATTGAAATGCAAACAGTTATCTGGACCAAAGGGTTC +
Preference number: 1 (lower is better)
Translates to: FIVMGRYTLGTVLAV*SHIEMQTVIWTKGF
Trigger: GAACCCTTTGGTCCAGATAACTGTTTGCATTTCAATATGACTCCAAACTGCCAGTACCGTCCCCAGAGTGTACCTCCCCATCACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp TGTAAGAAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTaGAGGTTTGAAACGAAATTGAATATAGTAAGAAATAAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: CKKCAGPSRGTIPGT*RFETKLNIVRNKAP
Trigger: TGGAGCCTTATTTCTTACTATATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTTCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CCA 90 bp TTTCTTACACATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATaGGTGACTGACAGGGCTGAAAACAGAGAAATGGACTTTGCAGGC +
Preference number: 1 (lower is better)
Translates to: FLTHSAQAVLCQHPK*VTDRAENREMDFAG
Trigger: GCCTGCAAAGTCCATTTCTCTGTTTTCAGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATGTGTAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 90 bp TTTAGGGCTCTGAGCCATCAGCACCACCCAGAAAAGCATTCTCTTTaGTTAAAGGCTAGCTGTGGACAAATTTCTCTCTTAAAAGGCACA +
Preference number: 1 (lower is better)
Translates to: FRALSHQHHPEKHSL*LKASCGQISLLKGT
Trigger: TGTGCCTTTTAAGAGAGAAATTTGTCCACAGCTAGCCTTTAATCAAAGAGAATGCTTTTCTGGGTGGTGCTGATGGCTCAGAGCCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp GTGGTTGCAATGAATCTGTACCCATTTCTAGGAAAAGAAGGCTTGTaGTGCTATTTTGTACAACACCCAGTATTATCTTTGGAGAACCAT +
Preference number: 1 (lower is better)
Translates to: VVAMNLYPFLGKEGL*CYFVQHPVLSLENH
Trigger: ATGGTTCTCCAAAGATAATACTGGGTGTTGTACAAAATAGCAGCACAAGCCTTCTTTTCCTAGAAATGGGTACAGATTCATTGCAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 90 bp GTTGCAATGAATCTGTACCCATTTCTAGGAAAAGAAGGCTTGTGCTaGTATTTTGTACAACACCCAGTATTATCTTTGGAGAACCATTCA +
Preference number: 1 (lower is better)
Translates to: VAMNLYPFLGKEGLC*YFVQHPVLSLENHS
Trigger: TGAATGGTTCTCCAAAGATAATACTGGGTGTTGTACAAAATAGCAGCACAAGCCTTCTTTTCCTAGAAATGGGTACAGATTCATTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 90 bp TTAATTTCAAGTTCTAAAAAGCCAGAGCAGCAACCATCCAGTAATTaGAATGCAATTCTCCTAGTGTCTTCTACAGACCGAGCATTTAAA +
Preference number: 1 (lower is better)
Translates to: LISSSKKPEQQPSSN*NAILLVSSTDRAFK
Trigger: TTTAAATGCTCGGTCTGTAGAAGACACTAGGAGAATTGCATTCCAATTACTGGATGGTTGCTGCTCTGGCTTTTTAGAACTTGAAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 90 bp GTTAAACATGTTTTACATGTCTCCAGAGTTATAAAGAGCTATACCTaGAATGCTGGTGTAGATGGTAATTACAAGAAGACTGTGACCACA +
Preference number: 1 (lower is better)
Translates to: VKHVLHVSRVIKSYT*NAGVDGNYKKTVTT
Trigger: TGTGGTCACAGTCTTCTTGTAATTACCATCTACACCAGCATTTCAGGTATAGCTCTTTATAACTCTGGAGACATGTAAAACATGTTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTGCTCTGCAGATCTCTaGGAAGGCGGAGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFCSADL*EGGGGR
Trigger: CCTTCCCCCTCCGCCTTCCCAGAGATCTGCAGAGCA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCCTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSLDPAA*LGVVSR
Trigger: TCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAG...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCAACTGGTGGCTGCTCTaGAGATCTCTGGGAAGGCGG +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSNWWLL*RSLGRR
Trigger: CCGCCTTCCCAGAGATCTGCAGAGCAGCCACCAGTT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTCTTGGTGTGCCCTGTaGTCAGGAAGACTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSSWCAL*SGRLQP
Trigger: GGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCCCCACAACTGGTGGCTaGTCTGCAGATCTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSPTTGG*SADLWE
Trigger: TTCCCAGAGATCTGCAGAGCAGCCACCAGTTGTGGG...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCACTGCTGGTGGCATCTaGACTGCTGGAGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSTAGGI*TAGVYG
Trigger: GCCATACACTCCAGCAGTGCAGATGCCACCAGCAGT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGGCTCGAGGTTCAGGTaGCCTCTCTGGAACTGGAAC +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPGSRFR*PLWNWN
Trigger: GTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp GATCCCACCCAAGTCGTCCTGCACCGCCGGGGTCATGTTATCATATaGGGACATGACAGGCCCTTTCACCTTCTGCCGAGCACGGCTCTC +
Preference number: 2 (lower is better)
Translates to: DPTQVVLHRRGHVII*GHDRPFHLLPSTAL
Trigger: GAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGGACGACTTGGGTGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGAGGTGGAACTGCTCTaGTGGTCGATCGGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSEVELL*WSIGLE
Trigger: TTCCAAACCGATCGACCAGCAGAGCAGTTCCACCTC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGGAAAGCCACAGGGATaGGCAGGGACAGACTCGGCG +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWGKPQG*AGTDSA
Trigger: CGCCGAGTCTGTCCCTGCGCATCCCTGTGGCTTTCC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSLWLAS*CALCSG
Trigger: TCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAG...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp ATACTGGGACACAACAGTCACACTGCTCTGGCGCTTGCCGTGTGGTaGGTACTGGTACAGCACACTGGGGTCCCTCTCCACGTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ILGHNSHTALALAVW*VLVQHTGVPLHVLG
Trigger: ACCCAGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp TCCAGGTTATCATACTGGGACACAACAGTCACACTGCTCTGGCGCTaGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: SRLSYWDTTVTLLWR*PCGWYWYSTLGSLS
Trigger: GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp TGTTTCAGGATGCTGCAAGGACAACTCTGCGGGCAGGAAGGCCCCTaGACCCAACGCTGTAGCATAGGTCCTGCTCTGTGGATGGGGAAA +
Preference number: 2 (lower is better)
Translates to: CFRMLQGQLCGQEGP*TQRCSIGPALWMGK
Trigger: TTTCCCCATCCACAGAGCAGGACCTATGCTACAGCGTTGGGTCAAGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAGCATCCTGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCATTTAATTTAGGGCTCTaGGCCATCAGCACCACCCAG +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPFNLGL*AISTTQ
Trigger: CTGGGTGGTGCTGATGGCTCAGAGCCCTAAATTAAA...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTCATGGTGGCTGTGCTaGTATTCTCTTCGGGGGACC +
Preference number: 2 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSSWWLC*YSLRGT
Trigger: GGTCCCCCGAAGAGAATACCAGCACAGCCACCATGA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTACCTGCCCCACAACTaGTGGCTGCTCTGCAGATCT +
Preference number: 2 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSYLPHN*WLLCRS
Trigger: AGATCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTCTCCATCATCCTGGTaGGGGGCAGTGGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWSPSSW*GAVVQE
Trigger: TTCCTGCACCACTGCCCCCCACCAGGATGATGGAGA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp AGCGGGCCTGGGAGGACTGATATGGCTTATATTGGTACAGAGGTCTaGGGCAGTAGGCTGGCTCATCATCTGGGGGAACTTCTGTCCGTG +
Preference number: 2 (lower is better)
Translates to: SGPGRTDMAYIGTEV*GSRLAHHLGELLSV
Trigger: CACGGACAGAAGTTCCCCCAGATGATGAGCCAGCCTACTGCCCAAGACCTCTGTACCAATATAAGCCATATCAGTCCTCCCAGGCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp GGGGATAAGGGGGCCCATTCTTTGACTCACAGAACTGCCTATGGCTaGCTTCTTGGTGTGCCCTGTGCTCAGGAAGACTGCAGCCCATGT +
Preference number: 2 (lower is better)
Translates to: GDKGAHSLTHRTAYG*LLGVPCAQEDCSPC
Trigger: ACATGGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAATGGGCCCCCTTATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTATCATATTGGGACATaGCAGGCCCTTTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSYHIGT*QALSPS
Trigger: AGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTaGGAGTGGTGTCCAGATGCGTTTCTTCCTGGGGCCACATATGTG +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHG*EWCPDAFLPGATYV
Trigger: CACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGGTCTCTTCAATGACTaGGTTGAGGCTTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: GKGTISSVRALKCGSSKIGLFND*VEACCA
Trigger: CGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTCATACTCGACCCGGCTaGATGGCTTGGAGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCHTRPG*MAWSGV
Trigger: GACACCACTCCAAGCCATGCAGCCGGGTCGAGTATG...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGACCATTGGCCCTTTTaGGGAGTTTTGTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSDHWPF*GVLLDC
Trigger: GCAGTCCAACAAAACTCCCCAAAAGGGCCAATGGTC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGACGCAGGGTCATCCATaGCTCGAGGTTCAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKETQGHP*LEVQVA
Trigger: GGCCACCTGAACCTCGAGCCATGGATGACCCTGCGT...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp CATAATCTAACTGGCCAGCTCCCTGGGGATAAGGGGGCCCATTCTTaGACTCACAGAACTGCCTATGGCTTGCTTCTTGGTGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: HNLTGQLPGDKGAHS*THRTAYGLLLGVPC
Trigger: ACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAATGGGCCCCCTTATCCCCAGGGAGCTGGCCAGTTAGATTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAAAAGGAATGATAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPKGMII*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTATCATTCCTTT...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGAGTTTATCCACACTTaGACCAAGATAAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPEFIHT*TKIRRR
Trigger: CCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGTTGCTGCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEVAACT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGCAGCAAC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGCCGTGTGTATCTCCTaGTCACAGCAGCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAAVCIS*SQQPLF
Trigger: GAAGAGGGGCTGCTGTGACCAGGAGATACACACGGC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: GKGTISSVRALKCGSSKIIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGCATTATTCTGGAGGTaGAACTGCTCTGCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVALFWR*NCSAGR
Trigger: TCGACCAGCAGAGCAGTTCCACCTCCAGAATAATGC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAA +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWTVETG*RLVLIQ
Trigger: TTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCATCATGTAAGTCATGGTaGCTGTGCTGGTATTCTCTT +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPSCKSW*LCWYSL
Trigger: AAGAGAATACCAGCACAGCCACCATGACTTACATGA...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTCCTTGGTGCTCATTTaGGCTGTTGCTGGAGTAGTT +
Preference number: 2 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSSLVLI*AVAGVV
Trigger: AACTACTCCAGCAACAGCCCAAATGAGCACCAAGGA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp TTGTATACCCAGCCTGAGAGGTCCCTGGTCTCTTCAATGACTGAGTaGAGGCTTGCTGTGCGGACTCAGCTAATGCTAGCGCCAACATTC +
Preference number: 2 (lower is better)
Translates to: LYTQPERSLVSSMTE*RLAVRTQLMLAPTF
Trigger: GAATGTTGGCGCTAGCATTAGCTGAGTCCGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACCAGGGACCTCTCAGGCTGGGTATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp CCGGGGACGTGGAGCCAAACCAGCATAACTGTACAAGCTCTTTCCTaGCAGCCTAGGATTGTAGAAAGCAAAGTCTCGATTGGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: PGTWSQTSITVQALS*QPRIVESKVSIGKA
Trigger: CGCCTTCCCAATCGAGACTTTGCTTTCTACAATCCTAGGCTGCAAGGAAAGAGCTTGTACAGTTATGCTGGTTTGGCTCCACGTCCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAATGAGAGGTTTTAAATaGGAGATGAGGTTGCCTATG +
Preference number: 2 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPMRGFK*EMRLPM
Trigger: CATAGGCAACCTCATCTCGCATTTAAAACCTCTCAT...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGATAATTTGAACTGCTaGTGGCATCTGCACTGCTGG +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWDNLNC*WHLHCW
Trigger: CCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp TCACACACAAGGTGGACTGTGCTGAGGTATCCGGCTCACAGTGATTaGCCATCCGGTTTCCACCCCACAACATTAGAAAGGGAAAGATGC +
Preference number: 2 (lower is better)
Translates to: SHTRWTVLRYPAHSD*PSGFHPTTLERERC
Trigger: GCATCTTTCCCTTTCTAATGTTGTGGGGTGGAAACCGGATGGCAAATCACTGTGAGCCGGATACCTCAGCACAGTCCACCTTGTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CAA 90 bp TTCTCTGGGGCAGAAGGCTGCCTAACCCAGGGTCGCTCCATCTCTTaGGAGAGCCTTACCTCTTTGTGGTTCAGTCTTAAAGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: FSGAEGCLTQGRSIS*ESLTSLWFSLKDSC
Trigger: GCAAGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGACCCTGGGTTAGGCAGCCTTCTGCCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAACTTTTGTGAAGATTTaGAGCAGGACCATTGGCCCT +
Preference number: 2 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVTFVKI*SRTIGP
Trigger: AGGGCCAATGGTCCTGCTTCAAATCTTCACAAAAGT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGTCACAGTTTCCTGGTaGATTATTCTGGAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: GKGTISSVRALKCGSSKIVTVSW*IILEVE
Trigger: TTCCACCTCCAGAATAATGCACCAGGAAACTGTGAC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGAAGTCATGGTGGCTGTaGTGGTATTCTCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEKSWWL*WYSLRG
Trigger: CCCCCGAAGAGAATACCAGCACAGCCACCATGACTT...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACAAGCTAGCCCTAGATaGCAAGTGTGTCCTGAGACA +
Preference number: 2 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRQASPR*QVCPET
Trigger: TGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGCAGCCACATCCCAGCTaGCTTCCTTGGTGCTCATTT +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEQPHPS*LPWCSF
Trigger: AAATGAGCACCAAGGAAGCCAGCTGGGATGTGGCTG...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATGGCAAGTGTGTCCTaGGACAGGTTTCTCTACTGG +
Preference number: 2 (lower is better)
Translates to: EHNRECRRLPGNRCELLSMASVS*DRFLYW
Trigger: CCAGTAGAGAAACCTGTCTCAGGACACACTTGCCAT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCAAAATGGCAATCCATaGTCTTCTATCCCACATGCA +
Preference number: 2 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWQNGNP*SSIPHA
Trigger: TGCATGTGGGATAGAAGATCATGGATTGCCATTTTG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTGTTAAGTCTACTTGGTaGTGTTGCTCCCCAGATTCA +
Preference number: 2 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVVKSTW*CCSPDS
Trigger: TGAATCTGGGGAGCAACATCACCAAGTAGACTTAAC...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 2 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKLSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTGCTCATTTGGGCTGTTaGTGGAGTAGTTGTCATGTA +
Preference number: 2 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVAHLGC*WSSCHV
Trigger: TACATGACAACTACTCCAGCAACAGCCCAAATGAGC...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGACAGGTTTCTCTACTaGGTTTCAGCACGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: TPFVKSPICEVTHKVDCADRFLY*VSARGF
Trigger: AAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGACAGGTTTCTCTACTaGGTTTCAGCACGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: EHNRECRRLPGNRCELLSDRFLY*VSARGF
Trigger: AAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGTGGCATCTGCACTGCTaGAGTGTATGGCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEWHLHC*SVWQQS
Trigger: TGATTGCTGCCATACACTCCAGCAGTGCAGATGCCA...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGCTGGCTTGTTAACTTaGAAGGCTACAATAAAGATA +
Preference number: 2 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSAGLLT*KATIKI
Trigger: TATCTTTATTGTAGCCTTCCAAGTTAACAAGCCAGC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCATTTGGGCTGTTGCTaGAGTAGTTGTCATGTAAGT +
Preference number: 2 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVHLGCC*SSCHVS
Trigger: ACTTACATGACAACTACTCCAGCAACAGCCCAAATG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp TGCCTAACCCAGGGTCGCTCCATCTCTTTGGAGAGCCTTACCTCTTaGTGGTTCAGTCTTAAAGATTCTTGCCCGGATGCAGCATATTTT +
Preference number: 2 (lower is better)
Translates to: CLTQGRSISLESLTS*WFSLKDSCPDAAYF
Trigger: AAAATATGCTGCATCCGGGCAAGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGACCCTGGGTTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGATGGCAAGTGTGTCCTaGGACAGGTTTCTCTACTGG +
Preference number: 2 (lower is better)
Translates to: NRECRRLPGNRCELLSIMMASVS*DRFLYW
Trigger: CCAGTAGAGAAACCTGTCTCAGGACACACTTGCCAT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR GCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAATTCTGGAGGTGGAACTaGTCTGCTGGTCGATCGGTT +
Preference number: 2 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQFWRWN*SAGRSV
Trigger: AACCGATCGACCAGCAGAGCAGTTCCACCTCCAGAA...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCATGGTCACAGTTTCCTaGTGCATTATTCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VASALLECMAAIILLSIIMVTVS*CIILEV
Trigger: CACCTCCAGAATAATGCACCAGGAAACTGTGACCAT...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCTGTTCTTCCCAGACTaGTCTTCAGGGAAACTTACA +
Preference number: 2 (lower is better)
Translates to: VASALLECMAAIILLSIILFFPD*SSGKLT
Trigger: TGTAAGTTTCCCTGAAGACCAGTCTGGGAAGAACAG...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGCACTGCTGGAGTGTATaGCAGCAATCATCTTACTCT +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEHCWSV*QQSSYS
Trigger: AGAGTAAGATGATTGCTGCCATACACTCCAGCAGTG...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAAGTTGTGCAGCTACTaGAGGAGAAGCAGGAACACA +
Preference number: 2 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSKLCSY*RRSRNT
Trigger: TGTGTTCCTGCTTCTCCTTCAGTAGCTGCACAACTT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGCACCCTGCTGAAAAGTaGCATACCTTTGGTAATAGT +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEHPAEK*HTFGNS
Trigger: ACTATTACCAAAGGTATGTCACTTTTCAGCAGGGTG...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGACTACATTCTCTCATTaGAACAGGCACCTGACTATG +
Preference number: 2 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKETTFSH*NRHLTM
Trigger: CATAGTCAGGTGCCTGTTTCAATGAGAGAATGTAGT...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGCTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 2 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRLSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAACCTGGTGCATTATTCTaGAGGTGGAACTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQPGALF*RWNCSA
Trigger: AGCAGAGCAGTTCCACCTCCAGAATAATGCACCAGG...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTACGGTACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 2 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCTVLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTACCGT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTACTGCATCCCTCCAATaGATTCTAAGGGAACAAAAG +
Preference number: 2 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRATASLQ*ILREQK
Trigger: CTTTTGTTCCCTTAGAATTCATTGGAGGGATGCAGT...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR TCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACATGGGATAAGAGAGACTaGACTGACAGGAACGGAATC +
Preference number: 2 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTWDKRD*TDRNGI
Trigger: GATTCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTTATATTTCATCTCACTaGTATCTTCCCCTTCTTACC +
Preference number: 2 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCYISSH*YLPLLT
Trigger: GGTAAGAAGGGGAAGATATCAGTGAGATGAAATATA...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCAACAGTGTGTCGATCTaGGCAAGTTGTGCAGCTACT +
Preference number: 2 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTNSVSI*ASCAAT
Trigger: AGTAGCTGCACAACTTGCGCAGATCGACACACTGTT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR GCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCCCTGAAGGCAGGCAATaGATTAAAAGCATCAATAGA +
Preference number: 2 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPPEGRQ*IKSINR
Trigger: TCTATTGATGCTTTTAATGCATTGCCTGCCTTCAGG...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCGATTCCACCTTAGTCTaGCCAAAGATAATCCTCATA +
Preference number: 2 (lower is better)
Translates to: VASALLECMAAIILLSIIDSTLV*PKIILI
Trigger: TATGAGGATTATCTTTGGCCAGACTAAGGTGGAATC...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 90 bp GAGATTTGTCTGCAAATTCTAAAGGGTGATGGAGTTTATCCACACTaGCACCAAGATAAGAAGGAGGCTGATCTCCACTGTAGAAACGGG +
Preference number: 2 (lower is better)
Translates to: EICLQILKGDGVYPH*HQDKKEADLHCRNG
Trigger: CCCGTTTCTACAGTGGAGATCAGCCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTCCATCACCCTTTAGAATTTGCAGACAAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTAAGTTGTGCAGCTACTaGAGGAGAAGCAGGAACACA +
Preference number: 2 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTKLCSY*RRSRNT
Trigger: TGTGTTCCTGCTTCTCCTTCAGTAGCTGCACAACTT...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR TCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCATTACAAGAAGACTGTaGCCACACAAGTATAGAGTA +
Preference number: 2 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPITRRL*PHKYRV
Trigger: TACTCTATACTTGTGTGGTCACAGTCTTCTTGTAAT...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGACGGGGAGAATGAAGTaGCAACAGTGTGTCGATCTG +
Preference number: 2 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPTGRMK*QQCVDL
Trigger: CAGATCGACACACTGTTGTCACTTCATTCTCCCCGT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR TCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAATTTGTATACCCAGCCTaGGAGGTCCCTGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: VKPTLSHLILISLCYWNKFVYPA*EVPGLF
Trigger: GAAGAGACCAGGGACCTCTCAGGCTGGGTATACAAA...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTGGTGGAGACTGGTCCTaGTCCAAGAAGGAGACAGTT +
Preference number: 2 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFGGDWS*SKKETV
Trigger: AACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACC...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCACTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 2 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEALSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR GCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGGAACACAACAGGGAATaGAGACGCCTACCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPEHNRE*RRLPGN
Trigger: ATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR CCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGCTTAAAAGGCACAGATaGCACACAGGATTGAAGATC +
Preference number: 2 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRLKRHR*HTGLKI
Trigger: GATCTTCAATCCTGTGTGCCATCTGTGCCTTTTAAG...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACATTACGTTATCCTAAATaGAAAGCCAAACACTCCCCA +
Preference number: 2 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTLRYPK*KAKHSP
Trigger: TGGGGAGTGTTTGGCTTTCCATTTAGGATAACGTAA...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAACAAAATCAGCAGTGGTaGGTTGTTCAGCCACATCCC +
Preference number: 2 (lower is better)
Translates to: VKPTLSHLILISLCYWNKQNQQW*VVQPHP
Trigger: GGGATGTGGCTGAACAACCCACCACTGCTGATTTTG...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAGTGGAACTGCTCTGCTaGTCGATCGGTTTGGAAATA +
Preference number: 2 (lower is better)
Translates to: VKPTLSHLILISLCYWNKVELLC*SIGLEI
Trigger: TATTTCCAAACCGATCGACCAGCAGAGCAGTTCCAC...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAAACAACACACCCTGCTaGAAAGTGACATACCTTTGG +
Preference number: 2 (lower is better)
Translates to: VKPTLSHLILISLCYWNKNNTPC*KVTYLW
Trigger: CCAAAGGTATGTCACTTTTCAGCAGGGTGTGTTGTT...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCAGAGGGTAGGTAAATaGCTTGCCCAAAGTCACAAT +
Preference number: 2 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHQRVGK*LAQSHN
Trigger: ATTGTGACTTTGGGCAAGTCATTTACCTACCCTCTG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAATAAGGGGACTTTTGTaGAGATTTGAAGCAGGACCA +
Preference number: 2 (lower is better)
Translates to: VKPTLSHLILISLCYWNKIRGLL*RFEAGP
Trigger: TGGTCCTGCTTCAAATCTTCACAAAAGTCCCCTTAT...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTACATGCAAATGCTGTTaGAAACACATCTGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: PKSLQGRQSYECFENEVFTCKCC*KHIWFR
Trigger: TCTGAACCAGATGTGTTTTCAACAGCATTTGCATGT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTCAGGGAAACTTACATaGTCATCAGACTTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFSGKLT*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGTAAGTTTCCCTGA...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGCAAATTCTAAAGGGTaGTGGAGTTTATCCACACTT +
Preference number: 2 (lower is better)
Translates to: PKSLQGRQSYECFENEVFANSKG*WSLSTL
Trigger: AAGTGTGGATAAACTCCATCACCCTTTAGAATTTGC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTAACAGTTTTTACATTTaGTGGTGTAGCTGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: PKSLQGRQSYECFENEVFNSFYI*WCSWLV
Trigger: AACAAGCCAGCTACACCATCAAATGTAAAAACTGTT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGAAATCGATGTGAACTaGTCTCAATTATGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: LKAGNALKASIEISGANKEIDVN*SQLCSK
Trigger: TTTGCTGCATAATTGAGAGCAGTTCACATCGATTTC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR-3UTR GCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTAGAGCTACGCAGTTGTaGAAAAATTATCCACGAATT +
Preference number: 2 (lower is better)
Translates to: PKSLQGRQSYECFENEVFRATQL*KNYPRI
Trigger: AATTCGTGGATAATTTTTGCACAACTGCGTAGCTCT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTATCTCTTTGTGTTACTaGAATAAACTACCGAGACAC +
Preference number: 2 (lower is better)
Translates to: PKSLQGRQSYECFENEVFISLCY*NKLPRH
Trigger: GTGTCTCGGTAGTTTATTCCAGTAACACAAAGAGAT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GACCCGGGCACCGTCCCGCACTTTCTCAGGCAGGCCTaGCTGGACAGCTGTAGCCATGGGACACTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: DPGTVPHFLRQA*LDSCSHGTLSS
Trigger: GCTGCTCAGTGTCCCATGGCTACAGCTGTCCAGCCAGGCCTGCCTGAGAAAGTGCGGGACGGTGCCCGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp GATGGCTTCTCCGGCTGCGTGCTACCATGGCCTCCGTaGTGGTGGGCTCTGTCCATCTCTGCCTCGGGATGC +
Preference number: 3 (lower is better)
Translates to: DGFSGCVLPWPP*WWALSISASGC
Trigger: GCATCCCGAGGCAGAGATGGACAGAGCCCACCATCACGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp CGGTCCTCTCCCTCGGGACTGATGGCCTTGGCTGCATaGCGGCTCTCCTTTCCTTCTGCCACTGAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: RSSPSGLMALAA*RLSFPSATERS
Trigger: ACTTCTCTCAGTGGCAGAAGGAAAGGAGAGCCGCCATGCAGCCAAGGCCATCAGTCCCGAGGGAGAGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp ACAACAGTCACACTGCTCTGGCGCTTGCCGTGTGGTTaGTACTGGTACAGCACACTGGGGTCCCTCTCCACG +
Preference number: 3 (lower is better)
Translates to: TTVTLLWRLPCG*YWYSTLGSLST
Trigger: CGTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGGTCGCTCCATCTCTTaGGAGAGCCTTACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSGRSIS*ESLTSL
Trigger: CAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGACC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp CCTGCACCGCCGGGGTCATGTTATCATATTGGGACATaGCAGGCCCTTTCACCTTCTGCCGAGCACGGCTCT +
Preference number: 3 (lower is better)
Translates to: PAPPGSCYHIGT*QALSPSAEHGS
Trigger: AGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp GATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTaGCATAGGCATCCACATCACACAGGGCCCCATCTG +
Preference number: 3 (lower is better)
Translates to: DWEGGEGVSTGL*HRHPHHTGPHL
Trigger: CAGATGGGGCCCTGTGTGATGTGGATGCCTATGGCACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CGCAGGGCTCATTCTGCATGGATCTGTGTTTCAGGATaGTGCAAGGACAACTCTGCGGGCAGGAAGGCCCCT +
Preference number: 3 (lower is better)
Translates to: RRAHSAWICVSG*CKDNSAGRKAP
Trigger: AGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAGCATCCTGAAACACAGATCCATGCAGAATGAGCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTaGGGTCCCTCTCCACGTTCTGGGTATGATGGAGTT +
Preference number: 3 (lower is better)
Translates to: GACRVVGTGTAH*GPSPRSGYDGV
Trigger: AACTCCATCATACCCAGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTACCCGGCTGCATGGCTaGGAGTGGTGTCCAGATGCG +
Preference number: 3 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCTRLHG*EWCPDA
Trigger: CGCATCTGGACACCACTCCAAGCCATGCAGCCGGGT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp GAGCGAATCATGGAAGACGGCGGAGCATGGAGAGACTaGACTCTCCGGATGGTAGGGTACGGTGGAATGTCT +
Preference number: 3 (lower is better)
Translates to: ERIMEDGGAWRD*TLRMVGYGGMS
Trigger: AGACATTCCACCGTACCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTCCATGATTCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTaGGTTGTTCAGCCACATCCCAGCTGGCTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: CAEVWQQQNQQW*VVQPHPSWLPW
Trigger: CCAAGGAAGCCAGCTGGGATGTGGCTGAACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp ATGGGAACAGAGCGAATCATGGAAGACGGCGGAGCATaGAGAGACTGCACTCTCCGGATGGTAGGGTACGGT +
Preference number: 3 (lower is better)
Translates to: MGTERIMEDGGA*RDCTLRMVGYG
Trigger: ACCGTACCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCAGATaGGTTTCTTCCTGGGGCCACATATGTGTTATAACG +
Preference number: 3 (lower is better)
Translates to: LDPAAWLGVVSR*VSSWGHICVIT
Trigger: CGTTATAACACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTaGTGTCCAGATGCGTTTCTTCCTGGGGCCACATAT +
Preference number: 3 (lower is better)
Translates to: EDTYSTRLHGLE*CPDAFLPGATY
Trigger: ATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTaGAGTGGTGTCCAGATGCGTTTCTTCCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SKKTHTRPGCMA*SGVQMRFFLGP
Trigger: TGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGATGCGTTTCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GAQRRHILDPAA*LGVVSRCVSSW
Trigger: CCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GGGAGAGAAATAGCCAGTCACGTTGGCCCGGGGACGTaGAGCCAAACCAGCATAACTGTACAAGCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: GREIASHVGPGT*SQTSITVQALS
Trigger: GGAAAGAGCTTGTACAGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATTTCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp AAGTCGTCCTGCACCGCCGGGGTCATGTTATCATATTaGGACATGACAGGCCCTTTCACCTTCTGCCGAGCA +
Preference number: 3 (lower is better)
Translates to: KSSCTAGVMLSY*DMTGPFTFCRA
Trigger: TGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGGACGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTGGTTGGGTAGCAGCTaGAACTTTCCCAAGCCATGT +
Preference number: 3 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSWLGSS*NFPKPC
Trigger: ACATGGCTTGGGAAAGTTCAAGCTGCTACCCAACCA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTaGATGGCTTGGAGTGGTGTCCAGATGCGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: QRSSKKTHTRPG*MAWSGVQMRFF
Trigger: GAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp TTATCATATTGGGACATGACAGGCCCTTTCACCTTCTaGCGAGCACGGCTCTCTCTCCGGATGGACTGCATG +
Preference number: 3 (lower is better)
Translates to: LSYWDMTGPFTF*RARLSLRMDCM
Trigger: CATGCAGTCCATCCGGAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp CCTAATCTCCATGCTGCTGGTGAGAACTTACAGGGCTaGTGTGGTCTCCAAGGGGCAATGGGTTGCCTACTT +
Preference number: 3 (lower is better)
Translates to: PNLHAAGENLQG*CGLQGAMGCLL
Trigger: AAGTAGGCAACCCATTGCCCCTTGGAGACCACACCAGCCCTGTAAGTTCTCACCAGCAGCATGGAGATTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CCA 72 bp GAACTTCTGTCCGTGAAATGGGAACAGAGCGAATCATaGAAGACGGCGGAGCATGGAGAGACTGCACTCTCC +
Preference number: 3 (lower is better)
Translates to: ELLSVKWEQSES*KTAEHGETALS
Trigger: GGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCATTTCACGGACAGAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp CTGGCTCATCATCTGGGGGAACTTCTGTCCGTGAAATaGGAACAGAGCGAATCATGGAAGACGGCGGAGCAT +
Preference number: 3 (lower is better)
Translates to: LAHHLGELLSVK*EQSESWKTAEH
Trigger: ATGCTCCGCCGTCTTCCATGATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCCCCAGATGATGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp CATTATGGTCGTTGGGAGAGAAATAGCCAGTCACGTTaGCCCGGGGACGTGGAGCCAAACCAGCATAACTGT +
Preference number: 3 (lower is better)
Translates to: HYGRWERNSQSR*PGDVEPNQHNC
Trigger: ACAGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATTTCTCTCCCAACGACCATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGACTTTTGTGAAGATTaGAAGCAGGACCATTGGCCC +
Preference number: 3 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSDFCED*KQDHWP
Trigger: GGGCCAATGGTCCTGCTTCAAATCTTCACAAAAGTC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTATATTGGTTGCTGCTaGTACCTGCCCCACAACTGG +
Preference number: 3 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWYIGCC*YLPHNW
Trigger: CCAGTTGTGGGGCAGGTACAAGCAGCAACCAATATA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp CACAAGGTGGACTGTGCTGAGGTATCCGGCTCACAGTaGTTTGCCATCCGGTTTCCACCCCACAACATTAGA +
Preference number: 3 (lower is better)
Translates to: HKVDCAEVSGSQ*FAIRFPPHNIR
Trigger: TCTAATGTTGTGGGGTGGAAACCGGATGGCAAATCACTGTGAGCCGGATACCTCAGCACAGTCCACCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 72 bp CAGTTTTCCCAGGATCTGATTTACTACGCAGATGGATaGCATAGATCCCACCCAAGTCGTCCTGCACCGCCG +
Preference number: 3 (lower is better)
Translates to: QFSQDLIYYADG*HRSHPSRPAPP
Trigger: CGGCGGTGCAGGACGACTTGGGTGGGATCTATGTCATCCATCTGCGTAGTAAATCAGATCCTGGGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp GCTATGACTCCTCTCTGGTTTAGGGGGTGGGACGATTaGCTGAGTGAGGTGTTCTTCCTCCTTGTAGCAGTC +
Preference number: 3 (lower is better)
Translates to: AMTPLWFRGWDD*LSEVFFLLVAV
Trigger: GACTGCTACAAGGAGGAAGAACACCTCACTCAGTCAATCGTCCCACCCCCTAAACCAGAGAGGAGTCATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CTTCCAGGTTATCATACTGGGACACAACAGTCACACTaGTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACA +
Preference number: 3 (lower is better)
Translates to: LPGYHTGTQQSH*SGACRVVGTGT
Trigger: TGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTaGTCGCAGGGCTCATTCTGCATGGATCTGTGTTTC +
Preference number: 3 (lower is better)
Translates to: QSTVQQRLLQLY*SQGSFCMDLCF
Trigger: GAAACACAGATCCATGCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp AAGGCAGTCCTCAGGCTCTTTCAAGCTAGCCCTAGATaGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGG +
Preference number: 3 (lower is better)
Translates to: KAVLRLFQASPR*QVCPETGFSTG
Trigger: CCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCCTGAGGACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR CCA 72 bp GGTAGAGGATGGTCACAGTTTCCTGGTGCATTATTCTaGAGGTGGAACTGCTCTGCTGGTCGATCGGTTTGG +
Preference number: 3 (lower is better)
Translates to: GRGWSQFPGALF*RWNCSAGRSVW
Trigger: CCAAACCGATCGACCAGCAGAGCAGTTCCACCTCCAGAATAATGCACCAGGAAACTGTGACCATCCTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GGGTGGAGACTGGTCCTGATCCAAGAAGGAGACAGTTaGCATACTGTTCTTCCCAGACTGGTCTTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: GWRLVLIQEGDS*HTVLPRLVFRE
Trigger: TTCCCTGAAGACCAGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TTCCTGGGGCCACATATGTGTTATAACGAAGACCCATaGAGGCTGGTGGCTCTGACCTGGCACCATACACTT +
Preference number: 3 (lower is better)
Translates to: FLGPHMCYNEDP*RLVALTWHHTL
Trigger: AAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATAACACATATGTGGCCCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp ATGGAGAGACTGCACTCTCCGGATGGTAGGGTACGGTaGAATGTCTTCGGGGTAACAGGTATTCCTGACAGA +
Preference number: 3 (lower is better)
Translates to: MERLHSPDGRVR*NVFGVTGIPDR
Trigger: TCTGTCAGGAATACCTGTTACCCCGAAGACATTCCACCGTACCCTACCATCCGGAGAGTGCAGTCTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp CTTTCACCTTCTGCCGAGCACGGCTCTCTCTCCGGATaGACTGCATGCGGTATTTTTCCATGTCCTCAAGAT +
Preference number: 3 (lower is better)
Translates to: LSPSAEHGSLSG*TACGIFPCPQD
Trigger: ATCTTGAGGACATGGAAAAATACCGCATGCAGTCCATCCGGAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TTCTTTGACTCACAGAACTGCCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGAAGACTGCAGCCCATG +
Preference number: 3 (lower is better)
Translates to: FFDSQNCLWLAS*CALCSGRLQPM
Trigger: CATGGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp AGGTTATCATACTGGGACACAACAGTCACACTGCTCTaGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACA +
Preference number: 3 (lower is better)
Translates to: RLSYWDTTVTLL*RLPCGWYWYST
Trigger: TGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGTCCCAGTATGATAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGGCAGCTCCATTTCCTaGATCATAATGCTCCATGTC +
Preference number: 3 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETGSSIS*IIMLHV
Trigger: GACATGGAGCATTATGATCAAGGAAATGGAGCTGCC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CAA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGATGGTGTAGCTGGCTaGTTAACTTGGAAGGCTACA +
Preference number: 3 (lower is better)
Translates to: GKGTISSVRALKCGSSKIDGVAG*LTWKAT
Trigger: TGTAGCCTTCCAAGTTAACAAGCCAGCTACACCATC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGCACCCAGGGTGTTTTaGTGCCAAAGGGAAGTATCC +
Preference number: 3 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAAPRVF*CQREVS
Trigger: GGATACTTCCCTTTGGCACAAAAACACCCTGGGTGC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CAA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGGACCATTGGCCCTTTaGGGGAGTTTTGTTGGACTG +
Preference number: 3 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTGPLAL*GSFVGL
Trigger: CAGTCCAACAAAACTCCCCAAAAGGGCCAATGGTCC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTCAAGAGCTACGCAGTaGTGCAAAAATTATCCACGA +
Preference number: 3 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSSRATQ*CKNYPR
Trigger: TCGTGGATAATTTTTGCACAACTGCGTAGCTCTTGA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTCCAAGAAGGAGACAGTaGGCATACTGTTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCPRRRQ*AYCSSQ
Trigger: CTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGG...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp CAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTaGAGGAGAAGCAGGAACACAACAGGGAATGCAGAC +
Preference number: 3 (lower is better)
Translates to: QQCVDLRKLCSY*RRSRNTTGNAD
Trigger: GTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR TCA 72 bp TGTGTTATAACGAAGACCCATGGAGGCTGGTGGCTCTaGCCTGGCACCATACACTTGGTGCTGCTCCAATTT +
Preference number: 3 (lower is better)
Translates to: CVITKTHGGWWL*PGTIHLVLLQF
Trigger: AAATTGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp GGTACGGTGGAATGTCTTCGGGGTAACAGGTATTCCTaGCAGAGGAGCTCAAAGAAGACACATACTCGACCC +
Preference number: 3 (lower is better)
Translates to: GTVECLRGNRYS*QRSSKKTHTRP
Trigger: GGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGTCAGGAATACCTGTTACCCCGAAGACATTCCACCGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp TGTAGGTGTGCTTCACATCAGCAGCCGGAGGCATGCTaGCTACATTATGGTCGTTGGGAGAGAAATAGCCAG +
Preference number: 3 (lower is better)
Translates to: CRCASHQQPEAC*LHYGRWERNSQ
Trigger: CTGGCTATTTCTCTCCCAACGACCATAATGTAGTCAGCATGCCTCCGGCTGCTGATGTGAAGCACACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp CAGCTACTGAAGGAGAAGCAGGAACACAACAGGGAATaGAGACGCCTACCAGGAAATCGATGTGAACTGCTC +
Preference number: 3 (lower is better)
Translates to: QLLKEKQEHNRE*RRLPGNRCELL
Trigger: GAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAGTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR CCA 72 bp ATAAGAAGGAGGCTGATCTCCACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAAGAAGGAGACAGTTGG +
Preference number: 3 (lower is better)
Translates to: IRRRLISTVETG*RLVLIQEGDSW
Trigger: CCAACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGTGGAGATCAGCCTCCTTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp GCATGGCTTGGAGTGGTGTCCAGATGCGTTTCTTCCTaGGGCCACATATGTGTTATAACGAAGACCCATGGA +
Preference number: 3 (lower is better)
Translates to: AWLGVVSRCVSS*GHICVITKTHG
Trigger: TCCATGGGTCTTCGTTATAACACATATGTGGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGTTTGAAGCAGGACCATaGGCCCTTTTGGGGAGTTTT +
Preference number: 3 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQFEAGP*ALLGSF
Trigger: AAAACTCCCCAAAAGGGCCAATGGTCCTGCTTCAAA...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGACTGCAATCTCTTCTaGAATTGTTACAGAGATGGG +
Preference number: 3 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVDCNLF*NCYRDG
Trigger: CCCATCTCTGTAACAATTCAAGAAGAGATTGCAGTC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCTTCCTTGGTGCTCATTaGGGCTGTTGCTGGAGTAGT +
Preference number: 3 (lower is better)
Translates to: VASALLECMAAIILLSIIFLGAH*GCCWSS
Trigger: ACTACTCCAGCAACAGCCCAAATGAGCACCAAGGAA...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp CGGATGCAGCATATTTTACTCCAGAGTTGTGGTAGCTaGCTGGCTCAGAAGTGTCTGGAATCCCTTTGGACC +
Preference number: 3 (lower is better)
Translates to: RMQHILLQSCGS*LAQKCLESLWT
Trigger: GGTCCAAAGGGATTCCAGACACTTCTGAGCCAGTCAGCTACCACAACTCTGGAGTAAAATATGCTGCATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp AGGCTGCTTCAACTCTATTGCTCGCAGGGCTCATTCTaGATGGATCTGTGTTTCAGGATGCTGCAAGGACAA +
Preference number: 3 (lower is better)
Translates to: RLLQLYCSQGSF*MDLCFRMLQGQ
Trigger: TTGTCCTTGCAGCATCCTGAAACACAGATCCATGCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp AGGGTCATCCATGGCTCGAGGTTCAGGTGGCCTCTCTaGAACTGGAACTACTCCTTGAACCTATTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: RVIHGSRFRWPL*NWNYSLNLLKD
Trigger: ATCTTTCAATAGGTTCAAGGAGTAGTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCCATGGATGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCTATGTCTCCATAATTaGTATACCCAGCCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQLCLHN*YTQPER
Trigger: CCTCTCAGGCTGGGTATACAAATTATGGAGACATAG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGTCTACTTGGTGATGTaGCTCCCCAGATTCAGTTGT +
Preference number: 3 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEVYLVM*LPRFSC
Trigger: ACAACTGAATCTGGGGAGCAACATCACCAAGTAGAC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGGAGGTGTGGGAGATTaGTCTGCAAATTCTAAAGGG +
Preference number: 3 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEGGVGD*SANSKG
Trigger: CCCTTTAGAATTTGCAGACAAATCTCCCACACCTCC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTGAAAACATGCTATCCTaGAGAAGCAGTAAACACAGC +
Preference number: 3 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCENMLS*RSSKHS
Trigger: GCTGTGTTTACTGCTTCTCAAGGATAGCATGTTTTC...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCACATGCAAATGCTGTaGAAAACACATCTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: VASALLECMAAIILLSIIHMQML*KTHLVQ
Trigger: CTGAACCAGATGTGTTTTCAACAGCATTTGCATGTG...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp CTAACTGAACACAAGATCCTTCTCAGACGGGGAGAATaGAGTGACAACAGTGTGTCGATCTGCGCAAGTTGT +
Preference number: 3 (lower is better)
Translates to: LTEHKILLRRGE*SDNSVSICASC
Trigger: ACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTTCAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR TCA 72 bp CTCAAAGTAAGGCTGAAGCTGAGTGACATGATAATCTaGGCGGGCCTGGGAGGACTGATATGGCTTATATTG +
Preference number: 3 (lower is better)
Translates to: LKVRLKLSDMII*AGLGGLIWLIL
Trigger: CAATATAAGCCATATCAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTTACTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCTTCCCCTTCTTACCTaGTGGGAATTATTTAATCCT +
Preference number: 3 (lower is better)
Translates to: VASALLECMAAIILLSIILPLLT*WELFNP
Trigger: AGGATTAAATAATTCCCACAAGGTAAGAAGGGGAAG...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp ACCTTGAAGGATCAGGGATTTTTCCACGACTCTAACTaGACACAAGATCCTTCTCAGACGGGGAGAATGAAG +
Preference number: 3 (lower is better)
Translates to: TLKDQGFFHDSN*TQDPSQTGRMK
Trigger: CTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTTCAGTTAGAGTCGTGGAAAAATCCCTGATCCTTCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR GCA 72 bp TGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTaGAGGTTTGAAACGAAATTGAATATAGTAAGAAAT +
Preference number: 3 (lower is better)
Translates to: CAGPSRGTIPGT*RFETKLNIVRN
Trigger: ATTTCTTACTATATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR GCA 72 bp AGGAATGATAATTTGAACTGCTGGTGGCATCTGCACTaGTGGAGTGTATGGCAGCAATCATCTTACTCTCCA +
Preference number: 3 (lower is better)
Translates to: RNDNLNCWWHLH*WSVWQQSSYSP
Trigger: TGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATCATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGTTATTTAATCCTATATaGGTTGCTGCTTGTACCTGC +
Preference number: 3 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKELFNPI*VAACTC
Trigger: GCAGGTACAAGCAGCAACCAATATAGGATTAAATAA...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp TGTAACTCACAAATTAAGGCTGGTTGGGTAGCAGCTTaGACTTTCCCAAGCCATGTGGTTGCAATGAATCTG +
Preference number: 3 (lower is better)
Translates to: CNSQIKAGWVAA*TFPSHVVAMNL
Trigger: CAGATTCATTGCAACCACATGGCTTGGGAAAGTTCAAGCTGCTACCCAACCAGCCTTAATTTGTGAGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp TTGGGTAGCAGCTTGAACTTTCCCAAGCCATGTGGTTaGAATGAATCTGTACCCATTTCTAGGAAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LGSSLNFPKPCG*NESVPISRKRR
Trigger: CCTTCTTTTCCTAGAAATGGGTACAGATTCATTGCAACCACATGGCTTGGGAAAGTTCAAGCTGCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp AGCCTTACCTCTTTGTGGTTCAGTCTTAAAGATTCTTaGCCGGATGCAGCATATTTTACTCCAGAGTTGTGG +
Preference number: 3 (lower is better)
Translates to: SLTSLWFSLKDS*PDAAYFTPELW
Trigger: CCACAACTCTGGAGTAAAATATGCTGCATCCGGGCAAGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp AATGATAATTTGAACTGCTGGTGGCATCTGCACTGCTaGAGTGTATGGCAGCAATCATCTTACTCTCCATCA +
Preference number: 3 (lower is better)
Translates to: NDNLNCWWHLHC*SVWQQSSYSPS
Trigger: TGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp TGTGTAACTGTGAATAATTGGCAGAGGGTAGGTAAATaGCTTGCCCAAAGTCACAATGAGTCAGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: CVTVNNWQRVGK*LAQSHNESVME
Trigger: CTCCATCACTGACTCATTGTGACTTTGGGCAAGTCATTTACCTACCCTCTGCCAATTATTCACAGTTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp GGCAAATTTCAAATTTACATCGTTTGCATCTATTACTaGTCCAAATGTGGTAACCTACTCCTCCGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: GKFQIYIVCIYY*SKCGNLLLRPH
Trigger: GTGGGGACGGAGGAGTAGGTTACCACATTTGGAGCAGTAATAGATGCAAACGATGTAAATTTGAAATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR-3UTR CAA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAATCTTCAATGACTGAGTaGAGGCTTGCTGTGCGGACT +
Preference number: 3 (lower is better)
Translates to: VKPTLSHLILISLCYWNKSSMTE*RLAVRT
Trigger: AGTCCGCACAGCAAGCCTCAACTCAGTCATTGAAGA...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TACTGCCTCTCTCCTACCTTTGATTCCACCTTAGTCTaGCCAAAGATAATCCTCATACTGAAAACATGCTAT +
Preference number: 3 (lower is better)
Translates to: YCLSPTFDSTLV*PKIILILKTCY
Trigger: ATAGCATGTTTTCAGTATGAGGATTATCTTTGGCCAGACTAAGGTGGAATCAAAGGTAGGAGAGAGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGGAGTTTATCCACACTaGCACCAAGATAAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: PKSLQGRQSYECFENEVFGVYPH*HQDKKE
Trigger: CTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTCC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR GCA 72 bp GGAGTTGGGCTAGAGAGTTCCTACTCTAATAAGGAATaGAACTTTCAAAACTCGTGGGTGTTAAACATGTTT +
Preference number: 3 (lower is better)
Translates to: GVGLESSYSNKE*NFQNSWVLNMF
Trigger: AAACATGTTTAACACCCACGAGTTTTGAAAGTTGCATTCCTTATTAGAGTAGGAACTCTCTAGCCCAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 72 bp AAATTTGAAAGTAATAACATTCAGTTACCCCATTTGTaGAGTCCCCCATTTGTGAAGTCACACACAAGGTGG +
Preference number: 3 (lower is better)
Translates to: KFESNNIQLPHL*SPPFVKSHTRW
Trigger: CCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGTAACTGAATGTTATTACTTTCAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR GCA 72 bp AAGTATGATCTAAGACTTCCTAGGATGCTTCTCTCATaGAGGTCATGGTTGAAAAATCAGGTTTTGCTATCT +
Preference number: 3 (lower is better)
Translates to: KYDLRLPRMLLS*RSWLKNQVLLS
Trigger: AGATAGCAAAACCTGATTTTTCAACCATGACCTGCATGAGAGAAGCATCCTAGGAAGTCTTAGATCATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR GCA 72 bp AATCTGTACCCATTTCTAGGAAAAGAAGGCTTGTGCTaGTATTTTGTACAACACCCAGTATTATCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: NLYPFLGKEGLC*YFVQHPVLSLE
Trigger: CTCCAAAGATAATACTGGGTGTTGTACAAAATAGCAGCACAAGCCTTCTTTTCCTAGAAATGGGTACAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp ACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTaGAATAAACTACCGAGACACTTTAGGAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: TLSHLILISLCY*NKLPRHFRKKR
Trigger: CCTTTTCTTCCTAAAGTGTCTCGGTAGTTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR-3UTR CAA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTAGCTGGCTTGTTAACTaGGAAGGCTACAATAAAGAT +
Preference number: 3 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFSWLVN*EGYNKD
Trigger: ATCTTTATTGTAGCCTTCCAAGTTAACAAGCCAGCT...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR TCA 72 bp GTTTTACATGTCTCCAGAGTTATAAAGAGCTATACCTaGAATGCTGGTGTAGATGGTAATTACAAGAAGACT +
Preference number: 3 (lower is better)
Translates to: VLHVSRVIKSYT*NAGVDGNYKKT
Trigger: AGTCTTCTTGTAATTACCATCTACACCAGCATTTCAGGTATAGCTCTTTATAACTCTGGAGACATGTAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 72 bp TCACATGCCTCTAACCATGTGGAAGAAGTAACTGTCTaGCATACTTTTGCTTTCATTATTACTTTCTTACAC +
Preference number: 3 (lower is better)
Translates to: SHASNHVEEVTV*HTFAFIITFLH
Trigger: GTGTAAGAAAGTAATAATGAAAGCAAAAGTATGTCAGACAGTTACTTCTTCCACATGGTTAGAGGCATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 72 bp TCTGACTCAAAGATAACAACACACCCTGCTGAAAAGTaGCATACCTTTGGTAATAGTATATTTCATCTCACT +
Preference number: 3 (lower is better)
Translates to: SDSKITTHPAEK*HTFGNSIFHLT
Trigger: AGTGAGATGAAATATACTATTACCAAAGGTATGTCACTTTTCAGCAGGGTGTGTTGTTATCTTTGAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CCA 72 bp TCCTACTCTAATAAGGAATGCAACTTTCAAAACTCGTaGGTGTTAAACATGTTTTACATGTCTCCAGAGTTA +
Preference number: 3 (lower is better)
Translates to: SYSNKECNFQNS*VLNMFYMSPEL
Trigger: TAACTCTGGAGACATGTAAAACATGTTTAACACCCACGAGTTTTGAAAGTTGCATTCCTTATTAGAGTAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR TCA 72 bp AGGTCTAAAATCTTAAGTCCTATTAATAGTTCAAGGTaGCCATATAGAAGAAAAACAACCTGTGGCACTTTC +
Preference number: 3 (lower is better)
Translates to: RSKILSPINSSR*PYRRKTTCGTF
Trigger: GAAAGTGCCACAGGTTGTTTTTCTTCTATATGGTCACCTTGAACTATTAATAGGACTTAAGATTTTAGACCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTAACTGGTGGCTGCTCTaGAGATCTCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFNWWLL*RSLGRR
Trigger: CCGCCTTCCCAGAGATCTGCAGAGCAGCCACCAGTT...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTGGTGGAGACTGGTCCTaGTCCAAGAAGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFGGDWS*SKKETV
Trigger: AACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACC...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTGCCTCTCCACCATGTaGTTAACACTTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFCLSTM*LTLSGA
Trigger: TGCCCCCGAAAGTGTTAAGCACATGGTGGAGAGGCA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTGTGCTCAGGAAGACTaGAGCCCATGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFCAQED*SPCQEA
Trigger: AGCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTCTGGGGCAGAAGGCTaGCTAACCCAGGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSSGAEG*LTQGRS
Trigger: GGAGCGACCCTGGGTTAGGCAGCCTTCTGCCCCAGA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTGATGGTAGGGTACGGTaGAATGTCTTCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFDGRVR*NVFGVT
Trigger: TGTTACCCCGAAGACATTCCACCGTACCCTACCATC...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCACTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPLDPAA*LGVVSR
Trigger: TCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAG...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCATAAGGGCTGGGATATaGAGCAGCCCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSIRAGI*SSPPSS
Trigger: GGAGGAAGGAGGGCTGCTTCATATCCCAGCCCTTAT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTCACTCTCATTCCGCTaGAGCTTTCGTTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFSLSFR*SFRLET
Trigger: TGTTTCTAAACGAAAGCTGCAGCGGAATGAGAGTGA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTGACTTCAGATTCATATaGTTCTTGGGCAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFDFRFI*FLGNCL
Trigger: GAGACAGTTGCCCAAGAAGCATATGAATCTGAAGTC...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTCTTTACTATCTGGGTaGGGGATCTATTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFSLLSG*GIYLWH
Trigger: ATGCCACAAATAGATCCCCCACCCAGATAGTAAAGA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp CACAACAGTCACACTGCTCTGGCGCTTGCCGTGTGGTaGGTACTGGTACAGCACACTGGGGTCCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HNSHTALALAVW*VLVQHTGVPLH
Trigger: GTGGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp ATGCTGCAAGGACAACTCTGCGGGCAGGAAGGCCCCTaGACCCAACGCTGTAGCATAGGTCCTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MLQGQLCGQEGP*TQRCSIGPALW
Trigger: CCACAGAGCAGGACCTATGCTACAGCGTTGGGTCAAGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCCGGGCCTGGGAGGACTaGTATGGCTTATATTGGTAC +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSRAWED*YGLYWY
Trigger: GTACCAATATAAGCCATATCAGTCCTCCCAGGCCCG...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCACTCCTCACTTTTAGCTaGACGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPLLTFS*TEGSFC
Trigger: GCAGAAGGAACCCTCCGTTCAGCTAAAAGTGAGGAG...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTTGAGACTGTACCAATaGCTTCTGACACCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSLRLYQ*LLTPVV
Trigger: CACCACGGGTGTCAGAAGTCATTGGTACAGTCTCAA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTACTACCATGGCCTCCGTaGTGGTGGGCTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVLPWPP*WWALSI
Trigger: GATGGACAGAGCCCACCATCACGGAGGCCATGGTAG...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGAGGCTGCTCTGCTTCTaGGGCAGGGATGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWRLLCF*GRDGFS
Trigger: GGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCCCCACCTGGAATCCGTaGTTGCCTCTCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSPTWNP*LPLHHV
Trigger: CACATGGTGGAGAGGCAAGCACGGATTCCAGGTGGG...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGCTTCTCCGGCTGCGTaGTACCATGGCCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWASPAA*YHGLRD
Trigger: ATCACGGAGGCCATGGTAGCACGCAGCCGGAGAAGC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTACCTCTTGATAACATaGGCAGCACCGACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSYLLIT*AAPTAG
Trigger: TCCTGCTGTCGGTGCTGCCCATGTTATCAAGAGGTA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGGCTACTCCAATGTCTaGTGGGCTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSGYSNV*WAQVNI
Trigger: GATGTTGACTTGAGCCCACCAGACATTGGAGTAGCC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCACCTGGTCCAGGGGCTaGACTTCAGATTCATATGCT +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSTWSRG*TSDSYA
Trigger: AGCATATGAATCTGAAGTCCAGCCCCTGGACCAGGT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGTGCTCTGCAGATCTCTaGGAAGGCGGAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETCSADL*EGGGGR
Trigger: CCTTCCCCCTCCGCCTTCCCAGAGATCTGCAGAGCA...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGGCTCGAGGTTCAGGTaGCCTCTCTGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSGSRFR*PLWNWN
Trigger: GTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCACGCAGGGTCATCCATaGCTCGAGGTTCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKITQGHP*LEVQVA
Trigger: GGCCACCTGAACCTCGAGCCATGGATGACCCTGCGT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCATATAACGAAGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATA...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGCTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETLDPAA*LGVVSR
Trigger: TCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAG...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGAACAGAGCGAATCATaGAAGACGGCGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPEQSES*KTAEHG
Trigger: TCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGTGCTTCCTGGAGTCTaGCATTGGCTACTACCTGTT +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPVLPGV*HWLLPV
Trigger: AACAGGTAGTAGCCAATGTCAGACTCCAGGAAGCAC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCCTCTCCCTCGGGACTaGTGGCCTTGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFPLPRD*WPWLHG
Trigger: GCCATGCAGCCAAGGCCATCAGTCCCGAGGGAGAGG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGCAAGGTGGACTGTGCTaGGGTATCCGGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETQGGLC*GIRLTV
Trigger: CACTGTGAGCCGGATACCTCAGCACAGTCCACCTTG...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGTTGCTGCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVVAACT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGCAGCAAC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCCACCCAAGTCGTCCTaGACCGCCGGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVPPKSS*TAGVML
Trigger: TAACATGACCCCGGCGGTGCAGGACGACTTGGGTGG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCAATTTGAACTGCTGGTaGCATCTGCACTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSNLNCW*HLHCWS
Trigger: ACTCCAGCAGTGCAGATGCCACCAGCAGTTCAAATT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGTCGCTCCATCTCTTTaGAGAGCCTTACCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSVAPSL*RALPLC
Trigger: ACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGAC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGATAGGTCCTGCTCTGTaGATGGGGAAAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETIGPAL*MGKARG
Trigger: CCCCCTGGCTTTCCCCATCCACAGAGCAGGACCTAT...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGCTTACAGGGCTGGTGTaGTCTCCAAGGGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETLTGLV*SPRGNG
Trigger: CCCATTGCCCCTTGGAGACCACACCAGCCCTGTAAG...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CAA 72 bp CTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTaGGAGTGGTGTCCAGATGCGTTTCTTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LKEDTYSTRLHG*EWCPDAFLPGA
Trigger: GGCCCCAGGAAGAAACGCATCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp CAAGTCGTCCTGCACCGCCGGGGTCATGTTATCATATaGGGACATGACAGGCCCTTTCACCTTCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QVVLHRRGHVII*GHDRPFHLLPS
Trigger: GCTCGGCAGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATAACATGACCCCGGCGGTGCAGGACGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGTAGCCATGGGACACTaGGCAGCAGCAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMVAMGH*AAAAPL
Trigger: CAGTGGTGCTGCTGCTGCTCAGTGTCCCATGGCTAC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCGATTGGGAAGGCGGTaGAGGGGTCTCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVRLGRR*RGLNWT
Trigger: AGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGAGGCTGCTCTGCTTCTaGGGCAGGGATGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQRLLCF*GRDGFS
Trigger: GGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCT...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAGGCTGCTCTGCTTCTaGGGCAGGGATGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGRLLCF*GRDGFS
Trigger: GGAGAAGCCATCCCTGCCTCAGAAGCAGAGCAGCCT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGGTGGGACGATTGACTaGGTGAGGTGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETGGTID*VRCSSS
Trigger: GGAGGAAGAACACCTCACTCAGTCAATCGTCCCACC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAAAAAGAGGCAGACAGTaGATCACTGGAAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPKRGRQ*ITGRSG
Trigger: CCCAGATCTTCCAGTGATGCACTGTCTGCCTCTTTT...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGTCACAGTTTCCTGGTaGATTATTCTGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSVTVSW*IILEVE
Trigger: TTCCACCTCCAGAATAATGCACCAGGAAACTGTGAC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAGGAAAGCCACAGGGATaGGCAGGGACAGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLGKPQG*AGTDSA
Trigger: CGCCGAGTCTGTCCCTGCGCATCCCTGTGGCTTTCC...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGGCTCTGTCCATCTCTaGCTCGGGATGCCTCCTATA +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWGSVHL*LGMPPI
Trigger: TATAGGAGGCATCCCGAGGCAGAGATGGACAGAGCC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTCTGGGGCAGAAGGCTaGCTAACCCAGGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSGAEG*LTQGRS
Trigger: GGAGCGACCCTGGGTTAGGCAGCCTTCTGCCCCAGA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGACACAACAGTCACACTaGTCTGGCGCTTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWTQQSH*SGACRV
Trigger: CACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGCACATACGTCCCCATaGCGCCCCCTCCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRAHTSP*RPLQRL
Trigger: GAGTCTTTGGAGGGGGCGGCATGGGGACGTATGTGC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCTCTGCAGATCTCTaGGAAGGCGGAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRCSADL*EGGGGR
Trigger: CCTTCCCCCTCCGCCTTCCCAGAGATCTGCAGAGCA...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATTCAGGCAGGCCTGGCTaGACAGCTGTAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNSGRPG*TAVAMG
Trigger: TCCCATGGCTACAGCTGTCCAGCCAGGCCTGCCTGA...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTCAGGCAGGCCTGGCTaGACAGCTGTAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQSGRPG*TAVAMG
Trigger: TCCCATGGCTACAGCTGTCCAGCCAGGCCTGCCTGA...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTATGGGGAGGTACACTCTaGGGACGGTACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVWGGTL*GRYWQF
Trigger: AAACTGCCAGTACCGTCCCCAGAGTGTACCTCCCCA...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCCTGGCACCATACACTTaGTGCTGCTCCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSLAPYT*CCSNLL
Trigger: CAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAG...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCTGGTGGCTCTGACCTaGCACCATACACTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWLVALT*HHTLGA
Trigger: AGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAATAGCCAGTCACGTTaGCCCGGGGACGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGNSQSR*PGDVEP
Trigger: TGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCTTCTGAGGCAGGGATaGCTTCTCCGGCTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQLLRQG*LLRLRA
Trigger: AGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACTTCTGAGGCAGGGATaGCTTCTCCGGCTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRLLRQG*LLRLRA
Trigger: AGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCTTCTGAGGCAGGGATaGCTTCTCCGGCTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQLLRQG*LLRLRA
Trigger: AGCACGCAGCCGGAGAAGCCATCCCTGCCTCAGAAG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGTCCTGCTCTGTGGATaGGGAAAGCCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMVLLCG*GKPGGT
Trigger: TGTGCCCCCTGGCTTTCCCCATCCACAGAGCAGGAC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
3UTR CAA 72 bp CAGCCTGAGAGGTCCCTGGTCTCTTCAATGACTGAGTaGAGGCTTGCTGTGCGGACTCAGCTAATGCTAGCG +
Preference number: 4 (lower is better)
Translates to: QPERSLVSSMTE*RLAVRTQLMLA
Trigger: CGCTAGCATTAGCTGAGTCCGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACCAGGGACCTCTCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp GGGGCCCATTCTTTGACTCACAGAACTGCCTATGGCTaGCTTCTTGGTGTGCCCTGTGCTCAGGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: GAHSLTHRTAYG*LLGVPCAQEDC
Trigger: GCAGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAATGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp ACTGGCCAGCTCCCTGGGGATAAGGGGGCCCATTCTTaGACTCACAGAACTGCCTATGGCTTGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TGQLPGDKGAHS*THRTAYGLLLG
Trigger: ACCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAAGAATGGGCCCCCTTATCCCCAGGGAGCTGGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGAGGCTGGTGGCTCTaGCCTGGCACCATACACTTG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAGGWWL*PGTIHL
Trigger: CAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCGATTGGGAAGGCGGTaGAGGGGTCTCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMRLGRR*RGLNWT
Trigger: AGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACGATTGGGAAGGCGGTaGAGGGGTCTCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRRLGRR*RGLNWT
Trigger: AGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTCTACCATGGCCTCCGTaGTGGTGGGCTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSLPWPP*WWALSI
Trigger: GATGGACAGAGCCCACCATCACGGAGGCCATGGTAG...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCCTGGAATCCGTGCTTaGCTCTCCACCATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWPGIRA*LSTMCL
Trigger: TAAGCACATGGTGGAGAGGCAAGCACGGATTCCAGG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGCCCACCTGGAATCCGTaGTTGCCTCTCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGPTWNP*LPLHHV
Trigger: CACATGGTGGAGAGGCAAGCACGGATTCCAGGTGGG...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000524655.5
CDS-3UTR GCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGTCAGGTCGGGGACGTaGTCAGAGTCAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIVRSGT*SESNSW
Trigger: CCATGAATTTGACTCTGAGCACGTCCCCGACCTGAC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGAACTGGTGGCTGCTCTaGAGATCTCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMNWWLL*RSLGRR
Trigger: CCGCCTTCCCAGAGATCTGCAGAGCAGCCACCAGTT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGGAGCATGGAGAGACTaGACTCTCCGGATGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRGAWRD*TLRMVG
Trigger: CCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGGCCCTTTCACCTTCTaGCGAGCACGGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTGPFTF*RARLSL
Trigger: GAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCGCTTCTCCGGCTGCGTaGTACCATGGCCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPASPAA*YHGLRD
Trigger: ATCACGGAGGCCATGGTAGCACGCAGCCGGAGAAGC...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATCCTGCTCCTCAGGCTaGTCTGCTTCTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSSCSSG*SASEAG
Trigger: CCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTCTTGGTGTGCCCTGTaGTCAGGAAGACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQSWCAL*SGRLQP
Trigger: GGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGA...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGAACTGCCTATGGCTTaGTTCTTGGTGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETELPMA*FLVCPV
Trigger: CACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGCACATACGTCCCCATaGCGCCCCCTCCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTAHTSP*RPLQRL
Trigger: GAGTCTTTGGAGGGGGCGGCATGGGGACGTATGTGC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACTGCAAGGACAACTCTaGGGGCAGGAAGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSLQGQL*GQEGPL
Trigger: CAAGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGCTGCAAGGACAACTCTaGGGGCAGGAAGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKELQGQL*GQEGPL
Trigger: CAAGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAG...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTATGTGTTTCAGGATGCTaGAAGGACAACTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVCVSGC*KDNSAG
Trigger: GCCCGCAGAGTTGTCCTTGCAGCATCCTGAAACACA...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGGGAAGAGTCCCACCTaGAATCCGTGCTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGGKSPT*NPCLPL
Trigger: GAGAGGCAAGCACGGATTCCAGGTGGGACTCTTCCC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000524655.5
CDS-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGCTTGCTGTGCTTCCTaGAGTCTGACATTGGCTACT +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSACCAS*SLTLAT
Trigger: AGTAGCCAATGTCAGACTCCAGGAAGCACAGCAAGC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGTCTTCAGCAGCCACCTaGTCCAGGGGCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQSSAAT*SRGWTS
Trigger: TGAAGTCCAGCCCCTGGACCAGGTGGCTGCTGAAGA...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCTCATGTAAGTCATGGTaGCTGTGCTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSSCKSW*LCWYSL
Trigger: AAGAGAATACCAGCACAGCCACCATGACTTACATGA...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCCAGCCACATCCCAGCTaGCTTCCTTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIQPHPS*LPWCSF
Trigger: AAATGAGCACCAAGGAAGCCAGCTGGGATGTGGCTG...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTTCAGGTGGCCTCTCTaGAACTGGAACTACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSFRWPL*NWNYSL
Trigger: CAAGGAGTAGTTCCAGTTCCAGAGAGGCCACCTGAA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGGCTCGAGGTTCAGGTaGCCTCTCTGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQGSRFR*PLWNWN
Trigger: GTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAACGCAGGGTCATCCATaGCTCGAGGTTCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEATQGHP*LEVQVA
Trigger: GGCCACCTGAACCTCGAGCCATGGATGACCCTGCGT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGTCTCCATCATCCTGGTaGGGGGCAGTGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQSPSSW*GAVVQE
Trigger: TTCCTGCACCACTGCCCCCCACCAGGATGATGGAGA...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACCCGGCTGCATGGCTTaGAGTGGTGTCCAGATGCGT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLPGCMA*SGVQMR
Trigger: ACGCATCTGGACACCACTCCAAGCCATGCAGCCGGG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTCTCGACCCGGCTGCATaGCTTGGAGTGGTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSLDPAA*LGVVSR
Trigger: TCTGGACACCACTCCAAGCCATGCAGCCGGGTCGAG...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGTTGGCCCGGGGACGTaGAGCCAAACCAGCATAACT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRVGPGT*SQTSIT
Trigger: AGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAAC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAATAGCCAGTCACGTTaGCCCGGGGACGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFNSQSR*PGDVEP
Trigger: TGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETLWLAS*CALCSG
Trigger: TCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAG...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCCGTGTGGTTGGTACTaGTACAGCACACTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQPCGWY*YSTLGS
Trigger: GGACCCCAGTGTGCTGTACCAGTACCAACCACACGG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCTGGCGCTTGCCGTGTaGTTGGTACTGGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQLALAV*LVLVQH
Trigger: GTGCTGTACCAGTACCAACCACACGGCAAGCGCCAG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGACAGTCACACTGCTCTaGCGCTTGCCGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMTVTLL*RLPCGW
Trigger: CCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGTCCTGCTCTGTGGATaGGGAAAGCCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAVLLCG*GKPGGT
Trigger: TGTGCCCCCTGGCTTTCCCCATCCACAGAGCAGGAC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTATAGGTCCTGCTCTGTaGATGGGGAAAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCIGPAL*MGKARG
Trigger: CCCCCTGGCTTTCCCCATCCACAGAGCAGGACCTAT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCATGCCATATCTCTCAATaGATGCTGTGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPCHISQ*MLCSFE
Trigger: TTCAAAGCTGCACAGCATTCATTGAGAGATATGGCA...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCACTCTCCAGACATTCTaGTTCGGCCTTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKITLQTF*FGLRRT
Trigger: AGTCCTCCTAAGGCCGAATCAGAATGTCTGGAGAGT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGTTCTGTGCGTGCGCTaGAGTGTGGCAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRVLCVR*SVAAAK
Trigger: TTTTGCTGCTGCCACACTTCAGCGCACGCACAGAAC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAGTGACATGATAATCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRSDMII*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCAGCCGGAGGCATGCTaGCTACATTATGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQQPEAC*LHYGRW
Trigger: CCAACGACCATAATGTAGTCAGCATGCCTCCGGCTG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCAGCCGGAGGCATGCTaGCTACATTATGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQQPEAC*LHYGRW
Trigger: CCAACGACCATAATGTAGTCAGCATGCCTCCGGCTG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGGACGATTGACTGAGTaGGGTGTTCTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVGRLTE*GVLPPC
Trigger: ACAAGGAGGAAGAACACCTCACTCAGTCAATCGTCC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTGGTGGGACGATTGACTaGGTGAGGTGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCGGTID*VRCSSS
Trigger: GGAGGAAGAACACCTCACTCAGTCAATCGTCCCACC...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAGGGGGTGGGACGATTaGCTGAGTGAGGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRRGWDD*LSEVFF
Trigger: GAAGAACACCTCACTCAGTCAATCGTCCCACCCCCT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGGAGTTTGAGGCTATaGCTCCTCTCTGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWWSLRL*LLSGLG
Trigger: CCCTAAACCAGAGAGGAGTCATAGCCTCAAACTCCA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATTCTCCATGCTGCTGGTaGGAACTTACAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNSPCCW*ELTGLV
Trigger: CACCAGCCCTGTAAGTTCTCACCAGCAGCATGGAGA...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCTTTAATTTAGGGCTCTaGGCCATCAGCACCACCCAG +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIFNLGL*AISTTQ
Trigger: CTGGGTGGTGCTGATGGCTCAGAGCCCTAAATTAAA...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGCGCCTCTTGCCATTaGGCTAAGAGTTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWCASCH*AKSFFP
Trigger: TGGGAAGAAACTCTTAGCGCAATGGCAAGAGGCGCA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCGTAATGAGCTTGCCGTaGTTTTTAGACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSVMSLP*FLDTGF
Trigger: AAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTAC...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGGGTTCCTTCTGCCCTaGCACCTTTCAGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTGFLLP*HLSEPW
Trigger: CCATGGCTCTGAAAGGTGGCAGGGCAGAAGGAACCC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTACGGAGGGTTCCTTCTaGCCTGCCACCTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSTEGSF*PATFQS
Trigger: GCTCTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGGGGTCATGGGTAACTaGTCCTGTCTGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGGVMGN*SCLSLS
Trigger: GGACAGACTCAGACAGGAGCAGTTACCCATGACCCC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAAACTGGTGGCTGCTCTaGAGATCTCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSNWWLL*RSLGRR
Trigger: CCGCCTTCCCAGAGATCTGCAGAGCAGCCACCAGTT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGTTGCTGCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAVAACT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGCAGCAAC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGTTGCTGCTTGTACCTaGCCCACAACTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSVAACT*PTTGGC
Trigger: GCAGCCACCAGTTGTGGGGCAGGTACAAGCAGCAAC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGGAAAGCCACAGGGATaGGCAGGGACAGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMGKPQG*AGTDSA
Trigger: CGCCGAGTCTGTCCCTGCGCATCCCTGTGGCTTTCC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATACTGCTGGTGGCATCTaGACTGCTGGAGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNTAGGI*TAGVYG
Trigger: GCCATACACTCCAGCAGTGCAGATGCCACCAGCAGT...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGGAGTGGTGTCCAGATaGGTTTCTTCCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFGVVSR*VSSWGH
Trigger: GTGGCCCCAGGAAGAAACGCATCTGGACACCACTCC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGAGTGGTGTCCAGATaGGTTTCTTCCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAGVVSR*VSSWGH
Trigger: GTGGCCCCAGGAAGAAACGCATCTGGACACCACTCC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACATACTCGACCCGGCTaGATGGCTTGGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLHTRPG*MAWSGV
Trigger: GACACCACTCCAAGCCATGCAGCCGGGTCGAGTATG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGTCTCAACTGGACTGTaGCATAGGCATCCACATCAC +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETVSTGL*HRHPHH
Trigger: GTGATGTGGATGCCTATGGCACAGTCCAGTTGAGAC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCCACCCAAGTCGTCCTaGACCGCCGGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKPPKSS*TAGVML
Trigger: TAACATGACCCCGGCGGTGCAGGACGACTTGGGTGG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGGCTCTGTCCATCTCTaGCTCGGGATGCCTCCTATA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQGSVHL*LGMPPI
Trigger: TATAGGAGGCATCCCGAGGCAGAGATGGACAGAGCC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGATGGCTTCTCCGGCTaGGTGCTACCATGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMDGFSG*VLPWPP
Trigger: CGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCACACTGCTCTGGCGCTTaGCGTGTGGTTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAHCSGA*RVVGTG
Trigger: ACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTG...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCTGAGTGACCGACTCTaGACTGTCCTTCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQLSDRL*TVLQGV
Trigger: GACACCCTGAAGGACAGTCCAGAGTCGGTCACTCAG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGGGAAGAGTCCCACCTaGAATCCGTGCTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSGKSPT*NPCLPL
Trigger: GAGAGGCAAGCACGGATTCCAGGTGGGACTCTTCCC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGCTTGTGTTCGTGCCTaGGCCTCTTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQACVRA*ASSNVS
Trigger: GCTGACATTGGAAGAGGCCCAGGCACGAACACAAGC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGCTTGTGTTCGTGCCTaGGCCTCTTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGACVRA*ASSNVS
Trigger: GCTGACATTGGAAGAGGCCCAGGCACGAACACAAGC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTCTTCAGCAGCCACCTaGTCCAGGGGCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSSAAT*SRGWTS
Trigger: TGAAGTCCAGCCCCTGGACCAGGTGGCTGCTGAAGA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATCTTCAGCAGCCACCTaGTCCAGGGGCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSSSAAT*SRGWTS
Trigger: TGAAGTCCAGCCCCTGGACCAGGTGGCTGCTGAAGA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVTVETG*RLVLIQ
Trigger: TTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTCATGGTGGCTGTGCTaGTATTCTCTTCGGGGGACC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQSWWLC*YSLRGT
Trigger: GGTCCCCCGAAGAGAATACCAGCACAGCCACCATGA...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGGCTCGAGGTTCAGGTaGCCTCTCTGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFGSRFR*PLWNWN
Trigger: GTTCCAGTTCCAGAGAGGCCACCTGAACCTCGAGCC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATCTCCATCATCCTGGTaGGGGGCAGTGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLSPSSW*GAVVQE
Trigger: TTCCTGCACCACTGCCCCCCACCAGGATGATGGAGA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCTCCATCATCCTGGTaGGGGGCAGTGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASPSSW*GAVVQE
Trigger: TTCCTGCACCACTGCCCCCCACCAGGATGATGGAGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCTCTGGGGACGGTACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWLWGRY*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTACCGTCCCCAGAG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTGGGGAGGTACACTCTaGGGACGGTACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQWGGTL*GRYWQF
Trigger: AAACTGCCAGTACCGTCCCCAGAGTGTACCTCCCCA...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCTGGTGGCTCTGACCTaGCACCATACACTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMLVALT*HHTLGA
Trigger: AGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAAGACGGCGGAGCATaGAGAGACTGCACTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKEDGGA*RDCTLR
Trigger: CCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCGTTGGCCCGGGGACGTaGAGCCAAACCAGCATAACT +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIIVGPGT*SQTSIT
Trigger: AGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAAC...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGATGGCCTTGGCTGCATaGCGGCTCTCCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMMALAA*RLSFPS
Trigger: AGAAGGAAAGGAGAGCCGCCATGCAGCCAAGGCCAT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTCTGGCGCTTGCCGTGTaGTTGGTACTGGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSLALAV*LVLVQH
Trigger: GTGCTGTACCAGTACCAACCACACGGCAAGCGCCAG...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCATAGGTCCTGCTCTGTaGATGGGGAAAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFIGPAL*MGKARG
Trigger: CCCCCTGGCTTTCCCCATCCACAGAGCAGGACCTAT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTGGCCTCTCTGGAACTaGAACTACTCCTTGAACCTA +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSWPLWN*NYSLNL
Trigger: TAGGTTCAAGGAGTAGTTCCAGTTCCAGAGAGGCCA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp AGGTGGACTGTGCTGAGGTATCCGGCTCACAGTGATTaGCCATCCGGTTTCCACCCCACAACATTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RWTVLRYPAHSD*PSGFHPTTLER
Trigger: CCTTTCTAATGTTGTGGGGTGGAAACCGGATGGCAAATCACTGTGAGCCGGATACCTCAGCACAGTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAACATCCTCAGCTGAATaGGGAGACATAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRTSSAE*GDIRAG
Trigger: CCCAGCCCTTATGTCTCCTCATTCAGCTGAGGATGT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGACATCCTCAGCTGAATaGGGAGACATAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGTSSAE*GDIRAG
Trigger: CCCAGCCCTTATGTCTCCTCATTCAGCTGAGGATGT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGGTCTCTTCAATGACTaGGTTGAGGCTTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMGLFND*VEACCA
Trigger: CGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGTGCTCCAATTTATTGTaGTGGGGAGGTACACTCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETCSNLL*WGGTLW
Trigger: CCAGAGTGTACCTCCCCATCACAATAAATTGGAGCA...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGGAGGCTGGTGGCTCTaGCCTGGCACCATACACTTG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMGGWWL*PGTIHL
Trigger: CAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTAGTGACATGATAATCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTSDMII*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACT...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTCCTCAAGATCCCATaGGGTGTAGGTGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVLKIP*GVGVLH
Trigger: GTGAAGCACACCTACACCTCATGGGATCTTGAGGAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTCCTCTCCCTCGGGACTaGTGGCCTTGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTPLPRD*WPWLHG
Trigger: GCCATGCAGCCAAGGCCATCAGTCCCGAGGGAGAGG...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCTACCATGGCCTCCGTaGTGGTGGGCTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMLPWPP*WWALSI
Trigger: GATGGACAGAGCCCACCATCACGGAGGCCATGGTAG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATCTCAGACGGGGAGAATaGAGTGACAACAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNLRRGE*SDNSVS
Trigger: CGACACACTGTTGTCACTTCATTCTCCCCGTCTGAG...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGAAAAGCATTCTCTTTaGTTAAAGGCTAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPEKHSL*LKASCG
Trigger: TCCACAGCTAGCCTTTAATCAAAGAGAATGCTTTTC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCCAGAGGGTAGGTAAATaGCTTGCCCAAAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSQRVGK*LAQSHN
Trigger: ATTGTGACTTTGGGCAAGTCATTTACCTACCCTCTG...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCCAGCCTTACTCTGACTaGTTGAGACAGACTGATCCT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIQPYSD*LRQTDP
Trigger: AGGATCAGTCTGTCTCAAGCAGTCAGAGTAAGGCTG...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGGGGTCATGGGTAACTaGTCCTGTCTGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSGVMGN*SCLSLS
Trigger: GGACAGACTCAGACAGGAGCAGTTACCCATGACCCC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATTCTGGAGGTGGAACTaGTCTGCTGGTCGATCGGTT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRFWRWN*SAGRSV
Trigger: AACCGATCGACCAGCAGAGCAGTTCCACCTCCAGAA...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTTCTGGAGGTGGAACTaGTCTGCTGGTCGATCGGTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGFWRWN*SAGRSV
Trigger: AACCGATCGACCAGCAGAGCAGTTCCACCTCCAGAA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAAGTCATGGTGGCTGTaGTGGTATTCTCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRKSWWL*WYSLRG
Trigger: CCCCCGAAGAGAATACCAGCACAGCCACCATGACTT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAAGTCATGGTGGCTGTaGTGGTATTCTCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGKSWWL*WYSLRG
Trigger: CCCCCGAAGAGAATACCAGCACAGCCACCATGACTT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAGCTGGCTTCCTTGGTaGTCATTTGGGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRSWLPW*SFGLLL
Trigger: CAGCAACAGCCCAAATGAGCACCAAGGAAGCCAGCT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCCCACAACTGGTGGCTaGTCTGCAGATCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIIPTTGG*SADLWE
Trigger: TTCCCAGAGATCTGCAGAGCAGCCACCAGTTGTGGG...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTTGGTGGCATCTGCACTaGTGGAGTGTATGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCWWHLH*WSVWQQ
Trigger: TTGCTGCCATACACTCCAGCAGTGCAGATGCCACCA...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGACTGCTGGTGGCATCTaGACTGCTGGAGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKETAGGI*TAGVYG
Trigger: GCCATACACTCCAGCAGTGCAGATGCCACCAGCAGT...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTATCTCTCCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVSLRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGGAGAGA...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGGCCCTTTCACCTTCTaGCGAGCACGGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMGPFTF*RARLSL
Trigger: GAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCCACCCAAGTCGTCCTaGACCGCCGGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMPPKSS*TAGVML
Trigger: TAACATGACCCCGGCGGTGCAGGACGACTTGGGTGG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGCTCTGTCCATCTCTaGCTCGGGATGCCTCCTATA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAGSVHL*LGMPPI
Trigger: TATAGGAGGCATCCCGAGGCAGAGATGGACAGAGCC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGTCCTGCTCCTCAGGCTaGTCTGCTTCTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMSCSSG*SASEAG
Trigger: CCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGA...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGTCTTGGTGTGCCCTGTaGTCAGGAAGACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKSWCAL*SGRLQP
Trigger: GGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGA...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGCTTGCTTCTTGGTGTaGCCTGTGCTCAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMACFLV*PVLRKT
Trigger: AGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGAACTGCCTATGGCTTaGTTCTTGGTGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRELPMA*FLVCPV
Trigger: CACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGTCTGGGGCAGAAGGCTaGCTAACCCAGGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKSGAEG*LTQGRS
Trigger: GGAGCGACCCTGGGTTAGGCAGCCTTCTGCCCCAGA...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTCTGCAAGGACAACTCTaGGGGCAGGAAGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSLQGQL*GQEGPL
Trigger: CAAGGGGCCTTCCTGCCCGCAGAGTTGTCCTTGCAG...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMLSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTATACCAGGAGGGACTTaGGCCTTGATAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVIPGGT*ALIEKL
Trigger: CAGCTTCTCTATCAAGGCCCAAGTCCCTCCTGGTAT...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGCTTGTGTTCGTGCCTaGGCCTCTTCCAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSACVRA*ASSNVS
Trigger: GCTGACATTGGAAGAGGCCCAGGCACGAACACAAGC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTACTCCAATGTCTGGTaGGCTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWYSNVW*AQVNIL
Trigger: GAGGATGTTGACTTGAGCCCACCAGACATTGGAGTA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCATGGTGGCTGTGCTaGTATTCTCTTCGGGGGACC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASWWLC*YSLRGT
Trigger: GGTCCCCCGAAGAGAATACCAGCACAGCCACCATGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACAGCCACATCCCAGCTaGCTTCCTTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRQPHPS*LPWCSF
Trigger: AAATGAGCACCAAGGAAGCCAGCTGGGATGTGGCTG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCAAAATCAGCAGTGGTaGGTTGTTCAGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVQNQQW*VVQPHP
Trigger: GGGATGTGGCTGAACAACCCACCACTGCTGATTTTG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGATAATTTGAACTGCTaGTGGCATCTGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETDNLNC*WHLHCW
Trigger: CCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTATAACGAAGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATA...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCTCTTGGGCAGTAGGCTaGCTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIISWAVG*LIIWGN
Trigger: GTTCCCCCAGATGATGAGCCAGCCTACTGCCCAAGA...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAAGCAAAGTCTCGATTaGGAAGGCGGTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRKQSLD*EGGEGV
Trigger: GACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQLWLAS*CALCSG
Trigger: TCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGCTATGACTCCTCTCTaGTTTAGGGGGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGAMTPL*FRGWDD
Trigger: ATCGTCCCACCCCCTAAACCAGAGAGGAGTCATAGC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTCGCTTGCCGTGTGGTTaGTACTGGTACAGCACACTG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSRLPCG*YWYSTL
Trigger: CAGTGTGCTGTACCAGTACCAACCACACGGCAAGCG...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTCGCTTGCCGTGTGGTTaGTACTGGTACAGCACACTG +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTRLPCG*YWYSTL
Trigger: CAGTGTGCTGTACCAGTACCAACCACACGGCAAGCG...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAAGGAGTGTTGATGGATaGCTCCTCATGAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVRSVDG*LLMNQK
Trigger: CTTTTGGTTCATGAGGAGTCATCCATCAACACTCCT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTAAGCTGCTGTTCCACTaGAGCAGGCAGATTCTATCT +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVKLLFH*SRQILS
Trigger: AGATAGAATCTGCCTGCTTCAGTGGAACAGCAGCTT...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCAACGTGATTCAGGATaGACTCAACAACCACAGACT +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWQRDSG*TQQPQT
Trigger: AGTCTGTGGTTGTTGAGTTCATCCTGAATCACGTTG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTATTGGAGAATTGACCTaGGCTTGTGTTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCIGELT*ACVRAW
Trigger: CCAGGCACGAACACAAGCTCAGGTCAATTCTCCAAT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCATGGCTTTCATCTCTaGAGGCTCACTCTCATTCCG +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQHGFHL*RLTLIP
Trigger: CGGAATGAGAGTGAGCCTTCAGAGATGAAAGCCATG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCACATCCTCAGCTGAATaGGGAGACATAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIITSSAE*GDIRAG
Trigger: CCCAGCCCTTATGTCTCCTCATTCAGCTGAGGATGT...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGACTCTCCAGACATTCTaGTTCGGCCTTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGTLQTF*FGLRRT
Trigger: AGTCCTCCTAAGGCCGAATCAGAATGTCTGGAGAGT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTGCTTCCTGGAGTCTaGCATTGGCTACTACCTGTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVLPGV*HWLLPV
Trigger: AACAGGTAGTAGCCAATGTCAGACTCCAGGAAGCAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGTGCTTCCTGGAGTCTaGCATTGGCTACTACCTGTT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMVLPGV*HWLLPV
Trigger: AACAGGTAGTAGCCAATGTCAGACTCCAGGAAGCAC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATTGAGACTGTACCAATaGCTTCTGACACCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRLRLYQ*LLTPVV
Trigger: CACCACGGGTGTCAGAAGTCATTGGTACAGTCTCAA...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTTGAGACTGTACCAATaGCTTCTGACACCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGLRLYQ*LLTPVV
Trigger: CACCACGGGTGTCAGAAGTCATTGGTACAGTCTCAA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGTCTCTTCAATGACTaGGTTGAGGCTTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAGLFND*VEACCA
Trigger: CGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGGTCTCTTCAATGACTaGGTTGAGGCTTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEGLFND*VEACCA
Trigger: CGCACAGCAAGCCTCAACTCAGTCATTGAAGAGACC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTGTATACCCAGCCTaGGAGGTCCCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSFVYPA*EVPGLF
Trigger: GAAGAGACCAGGGACCTCTCAGGCTGGGTATACAAA...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATTTGTATACCCAGCCTaGGAGGTCCCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAFVYPA*EVPGLF
Trigger: GAAGAGACCAGGGACCTCTCAGGCTGGGTATACAAA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGTAGCCATGGGACACTaGGCAGCAGCAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKVAMGH*AAAAPL
Trigger: CAGTGGTGCTGCTGCTGCTCAGTGTCCCATGGCTAC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQGNFCP*NGNRAN
Trigger: ATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACGGGCCTGGGAGGACTaGTATGGCTTATATTGGTAC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLRAWED*YGLYWY
Trigger: GTACCAATATAAGCCATATCAGTCCTCCCAGGCCCG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAAAGGCTGAAGCTGAGTaGCATGATAATCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRKAEAE*HDNLSG
Trigger: CCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGTCCTCAAGATCCCATaGGGTGTAGGTGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAVLKIP*GVGVLH
Trigger: GTGAAGCACACCTACACCTCATGGGATCTTGAGGAC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCCAGAGTTGTGGTAGCTaGCTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPQSCGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAGTCAGCTACCACAACTCTG...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTGGAGTTTGAGGCTATaGCTCCTCTCTGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGWSLRL*LLSGLG
Trigger: CCCTAAACCAGAGAGGAGTCATAGCCTCAAACTCCA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAACGGGGAGAATGAAGTaGCAACAGTGTGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRTGRMK*QQCVDL
Trigger: CAGATCGACACACTGTTGTCACTTCATTCTCCCCGT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACTCAGACGGGGAGAATaGAGTGACAACAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSLRRGE*SDNSVS
Trigger: CGACACACTGTTGTCACTTCATTCTCCCCGTCTGAG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAACAACACACCCTGCTaGAAAGTGACATACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKINNTPC*KVTYLW
Trigger: CCAAAGGTATGTCACTTTTCAGCAGGGTGTGTTGTT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTAACATCTGCGCCTCTTaGCATTGCGCTAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVNICAS*HCAKSF
Trigger: GAAACTCTTAGCGCAATGGCAAGAGGCGCAGATGTT...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACCTGGAATCCGTGCTTaGCTCTCCACCATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLPGIRA*LSTMCL
Trigger: TAAGCACATGGTGGAGAGGCAAGCACGGATTCCAGG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCGTCAGGTCGGGGACGTaGTCAGAGTCAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPVRSGT*SESNSW
Trigger: CCATGAATTTGACTCTGAGCACGTCCCCGACCTGAC...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGTCAGGTCGGGGACGTaGTCAGAGTCAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFVRSGT*SESNSW
Trigger: CCATGAATTTGACTCTGAGCACGTCCCCGACCTGAC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCTGAGCTTGTGTTCGTaGCTGGGCCTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFLSLCS*LGLFQC
Trigger: ACATTGGAAGAGGCCCAGGCACGAACACAAGCTCAG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTCTGAGCTTGTGTTCGTaGCTGGGCCTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTLSLCS*LGLFQC
Trigger: ACATTGGAAGAGGCCCAGGCACGAACACAAGCTCAG...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGGGTTCCTTCTGCCCTaGCACCTTTCAGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMGFLLP*HLSEPW
Trigger: CCATGGCTCTGAAAGGTGGCAGGGCAGAAGGAACCC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTGTTCAGAGCTTGCTGTaGTTCCTGGAGTCTGACATT +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVVQSLL*FLESDI
Trigger: AATGTCAGACTCCAGGAAGCACAGCAAGCTCTGAAC...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAGACAGGTTCAGAGCTTaGTGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLDRFRA*CASWSL
Trigger: CAGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTC...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGACAGGTTCAGAGCTTaGTGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTDRFRA*CASWSL
Trigger: CAGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTAAGTCATGGTGGCTGTaGTGGTATTCTCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSKSWWL*WYSLRG
Trigger: CCCCCGAAGAGAATACCAGCACAGCCACCATGACTT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTAGCTGGCTTCCTTGGTaGTCATTTGGGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSSWLPW*SFGLLL
Trigger: CAGCAACAGCCCAAATGAGCACCAAGGAAGCCAGCT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTTCCTATATTGGTTGCTaGTTGTACCTGCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVSYIGC*LYLPHN
Trigger: GTTGTGGGGCAGGTACAAGCAGCAACCAATATAGGA...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTGGTGGCATCTGCACTaGTGGAGTGTATGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSWWHLH*WSVWQQ
Trigger: TTGCTGCCATACACTCCAGCAGTGCAGATGCCACCA...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATGGTGGCATCTGCACTaGTGGAGTGTATGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSWWHLH*WSVWQQ
Trigger: TTGCTGCCATACACTCCAGCAGTGCAGATGCCACCA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTTCCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVSGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGGA...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGGCCCTTTCACCTTCTaGCGAGCACGGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKGPFTF*RARLSL
Trigger: GAGAGAGAGCCGTGCTCGGCAGAAGGTGAAAGGGCC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTGTGCTCAGGAAGACTaGAGCCCATGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSCAQED*SPCQEA
Trigger: AGCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACA...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGCACATACGTCCCCATaGCGCCCCCTCCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTAHTSP*RPLQRL
Trigger: GAGTCTTTGGAGGGGGCGGCATGGGGACGTATGTGC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTGTGTTTCAGGATGCTaGAAGGACAACTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFCVSGC*KDNSAG
Trigger: GCCCGCAGAGTTGTCCTTGCAGCATCCTGAAACACA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTCGCAGGGCTCATTCTaGATGGATCTGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQSQGSF*MDLCFR
Trigger: CCTGAAACACAGATCCATGCAGAATGAGCCCTGCGA...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTCGCAGGGCTCATTCTaGATGGATCTGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMSQGSF*MDLCFR
Trigger: CCTGAAACACAGATCCATGCAGAATGAGCCCTGCGA...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCTGCTTCAACTCTATTaGTCGCAGGGCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMLLQLY*SQGSFC
Trigger: GCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCGGCTCACAGTGATTTaGCATCCGGTTTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKRLTVI*HPVSTP
Trigger: TGGGGTGGAAACCGGATGGCAAATCACTGTGAGCCG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGACCATCCCAGGGACTTaGAGGTTTGAAACGAAATTG +
Preference number: 4 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETTIPGT*RFETKL
Trigger: CAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGT...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATGTGTGGGAGAGCTCTaGCTCCAGGAGCTTAATCCT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSCVGEL*LQELNP
Trigger: AGGATTAAGCTCCTGGAGGCAGAGCTCTCCCACACA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGATCTCCAGGAATCTCTaGAACATCTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGISRNL*NICASC
Trigger: GCAAGAGGCGCAGATGTTCCAGAGATTCCTGGAGAT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000524655.5
CDS-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGACTGGGGAACTTTTTaGTTAATTAACTCAACACAG +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPDWGTF*LINSTQ
Trigger: CTGTGTTGAGTTAATTAACCAAAAAGTTCCCCAGTC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATATACCAGGAGGGACTTaGGCCTTGATAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNIPGGT*ALIEKL
Trigger: CAGCTTCTCTATCAAGGCCCAAGTCCCTCCTGGTAT...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCTCACCATCAACTGCATaGAGAGATGTAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKISPSTA*RDVRDS
Trigger: GGAGTCTCTTACATCTCTCCATGCAGTTGATGGTGA...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTCAGACAGTGCATCACTaGAAGATCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCQTVHH*KIWVFW
Trigger: CCAGAAGACCCAGATCTTCCAGTGATGCACTGTCTG...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAAGGAGACATAAGGGCTaGGATATGAAGCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSRRHKG*DMKQPS
Trigger: GGAGGGCTGCTTCATATCCCAGCCCTTATGTCTCCT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTAGGAGACATAAGGGCTaGGATATGAAGCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTRRHKG*DMKQPS
Trigger: GGAGGGCTGCTTCATATCCCAGCCCTTATGTCTCCT...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGTCCAGGGTAAAGAATaGACTCAGTTTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIVQGKE*TQFLLK
Trigger: CTTCAGGAGAAACTGAGTCCATTCTTTACCCTGGAC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATCCTGGTGCATTATTCTaGAGGTGGAACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNPGALF*RWNCSA
Trigger: AGCAGAGCAGTTCCACCTCCAGAATAATGCACCAGG...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGCCTGGTGCATTATTCTaGAGGTGGAACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGPGALF*RWNCSA
Trigger: AGCAGAGCAGTTCCACCTCCAGAATAATGCACCAGG...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTACTGTTCTTCCCAGACTaGTCTTCAGGGAAACTTACA +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVLFFPD*SSGKLT
Trigger: TGTAAGTTTCCCTGAAGACCAGTCTGGGAAGAACAG...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACAGCCACATCCCAGCTaGCTTCCTTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLQPHPS*LPWCSF
Trigger: AAATGAGCACCAAGGAAGCCAGCTGGGATGTGGCTG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGTGGGGAGGTACACTCTaGGGACGGTACTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKWGGTL*GRYWQF
Trigger: AAACTGCCAGTACCGTCCCCAGAGTGTACCTCCCCA...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACACCCGGCTGCATGGCTTaGAGTGGTGTCCAGATGCGT +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTPGCMA*SGVQMR
Trigger: ACGCATCTGGACACCACTCCAAGCCATGCAGCCGGG...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGATGGTAGGGTACGGTaGAATGTCTTCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGDGRVR*NVFGVT
Trigger: TGTTACCCCGAAGACATTCCACCGTACCCTACCATC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGATGGTAGGGTACGGTaGAATGTCTTCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQDGRVR*NVFGVT
Trigger: TGTTACCCCGAAGACATTCCACCGTACCCTACCATC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGAAGACGGCGGAGCATaGAGAGACTGCACTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTEDGGA*RDCTLR
Trigger: CCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGAACAGAGCGAATCATaGAAGACGGCGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSEQSES*KTAEHG
Trigger: TCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGAACAGAGCGAATCATaGAAGACGGCGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSEQSES*KTAEHG
Trigger: TCCATGCTCCGCCGTCTTCCATGATTCGCTCTGTTC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAAAGCAAAGTCTCGATTaGGAAGGCGGTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLKQSLD*EGGEGV
Trigger: GACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTAAGCAAAGTCTCGATTaGGAAGGCGGTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTKQSLD*EGGEGV
Trigger: GACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTT...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCAATAGCCAGTCACGTTaGCCCGGGGACGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTNSQSR*PGDVEP
Trigger: TGGCTCCACGTCCCCGGGCCAACGTGACTGGCTATT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGGCTCTCTCTCCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGGSLSG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGGAGAGAGAGCC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATCTGGAGTGTTTCTCTaGGGCAGAAGGCTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSSGVFL*GRRLPN
Trigger: GTTAGGCAGCCTTCTGCCCCAGAGAAACACTCCAGA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATCTGGAGTGTTTCTCTaGGGCAGAAGGCTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLSGVFL*GRRLPN
Trigger: GTTAGGCAGCCTTCTGCCCCAGAGAAACACTCCAGA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGTCTGGAGTGTTTCTCTaGGGCAGAAGGCTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKESGVFL*GRRLPN
Trigger: GTTAGGCAGCCTTCTGCCCCAGAGAAACACTCCAGA...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTCCTTGTAGCAGTCTCTaGAGTGTTTCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSPCSSL*SVSLGQ
Trigger: CTGCCCCAGAGAAACACTCCAGAGACTGCTACAAGG...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCGCTTGCCGTGTGGTTaGTACTGGTACAGCACACTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKRLPCG*YWYSTL
Trigger: CAGTGTGCTGTACCAGTACCAACCACACGGCAAGCG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCAAGCTAGCCCTAGATaGCAAGTGTGTCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQQASPR*QVCPET
Trigger: TGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTGAGAACTTACAGGGCTaGTGTGGTCTCCAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAENLQG*CGLQGA
Trigger: TGCCCCTTGGAGACCACACCAGCCCTGTAAGTTCTC...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGAAGCCAGCAAGTGTGTaGGAGAGCTCTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMKPASV*ESSASR
Trigger: CCTGGAGGCAGAGCTCTCCCACACACTTGCTGGCTT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392657.7
CDS-3UTR CCA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGCTGGCTTGTTAACTTaGAAGGCTACAATAAAGATA +
Preference number: 4 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPAGLLT*KATIKI
Trigger: TATCTTTATTGTAGCCTTCCAAGTTAACAAGCCAGC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGAAGCTGCTGTTCCACTaGAGCAGGCAGATTCTATCT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQKLLFH*SRQILS
Trigger: AGATAGAATCTGCCTGCTTCAGTGGAACAGCAGCTT...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGAACAGCACATCAACGTaGTTCAGGATGAACTCAACA +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWNSTST*FRMNST
Trigger: TGTTGAGTTCATCCTGAATCACGTTGATGTGCTGTT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTGGAGAATTGACCTaGGCTTGTGTTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSIGELT*ACVRAW
Trigger: CCAGGCACGAACACAAGCTCAGGTCAATTCTCCAAT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTATTGGAGAATTGACCTaGGCTTGTGTTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSIGELT*ACVRAW
Trigger: CCAGGCACGAACACAAGCTCAGGTCAATTCTCCAAT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTATAAGGGCTGGGATATaGAGCAGCCCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSIRAGI*SSPPSS
Trigger: GGAGGAAGGAGGGCTGCTTCATATCCCAGCCCTTAT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCGTCAACATCCTCAGCTaGATGAGGAGACATAAGGGC +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIIVNILS*MRRHKG
Trigger: GCCCTTATGTCTCCTCATTCAGCTGAGGATGTTGAC...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGAAGATGATGCATTCTaGGCTGTGGTATTTGAGACT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIEDDAF*AVVFET
Trigger: AGTCTCAAATACCACAGCTCAGAATGCATCATCTTC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCTGCTTGAGACAGACTaGTCCTCTTTCCCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFLLETD*SSFPGN
Trigger: ATTGCCAGGGAAAGAGGATCAGTCTGTCTCAAGCAG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGTAACTGCTCCTGTCTaGGTCTGTCCAGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFVTAPV*VCPEAT
Trigger: TGTAGCTTCTGGACAGACTCAGACAGGAGCAGTTAC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCTCAGGGAAACTTACATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKISGKLT*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGTAAGTTTCCCTGA...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCAGCCGGAGGCATGCTaGCTACATTATGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMQPEAC*LHYGRW
Trigger: CCAACGACCATAATGTAGTCAGCATGCCTCCGGCTG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCACTTTCCTTCTGCCACTaGGAGAAGTCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEALSFCH*EKSSFP
Trigger: GGGAAAACTGGACTTCTCTCAGTGGCAGAAGGAAAG...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCCTTTCCTTCTGCCACTaGGAGAAGTCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIILSFCH*EKSSFP
Trigger: GGGAAAACTGGACTTCTCTCAGTGGCAGAAGGAAAG...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGGACGATTGACTGAGTaGGGTGTTCTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAGRLTE*GVLPPC
Trigger: ACAAGGAGGAAGAACACCTCACTCAGTCAATCGTCC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATGGAGTTTGAGGCTATaGCTCCTCTCTGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAWSLRL*LLSGLG
Trigger: CCCTAAACCAGAGAGGAGTCATAGCCTCAAACTCCA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCATGGCAAGTGTGTCCTaGGACAGGTTTCTCTACTGG +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFMASVS*DRFLYW
Trigger: CCAGTAGAGAAACCTGTCTCAGGACACACTTGCCAT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTGTATCCGGCTCACAGTaGTTTGCCATCCGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAVSGSQ*FAIRFP
Trigger: TGGAAACCGGATGGCAAATCACTGTGAGCCGGATAC...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGACCCTCTGTGCACACTaGCATTATCTTGCACACGTT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMTLCAH*HYLAHV
Trigger: AACGTGTGCAAGATAATGTCAGTGTGCACAGAGGGT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGCACCCTGCTGAAAAGTaGCATACCTTTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWHPAEK*HTFGNS
Trigger: ACTATTACCAAAGGTATGTCACTTTTCAGCAGGGTG...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATGCGCCTCTTGCCATTaGGCTAAGAGTTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSCASCH*AKSFFP
Trigger: TGGGAAGAAACTCTTAGCGCAATGGCAAGAGGCGCA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCAATCTCTGGAACATCTaGGCCTCTTGCCATTGCGCT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPNLWNI*ASCHCA
Trigger: AGCGCAATGGCAAGAGGCGCAGATGTTCCAGAGATT...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACACTTCCATGAAAGCTaGTGTTCCACTGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSHFHES*CSTEAG
Trigger: GCCTGCTTCAGTGGAACAGCAGCTTTCATGGAAGTG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACACTTCCATGAAAGCTaGTGTTCCACTGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLHFHES*CSTEAG
Trigger: GCCTGCTTCAGTGGAACAGCAGCTTTCATGGAAGTG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGGGTTCCTTCTGCCCTaGCACCTTTCAGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKGFLLP*HLSEPW
Trigger: CCATGGCTCTGAAAGGTGGCAGGGCAGAAGGAACCC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAACGGAGGGTTCCTTCTaGCCTGCCACCTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTTEGSF*PATFQS
Trigger: GCTCTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGT...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTTCAGAGCTTGCTGTaGTTCCTGGAGTCTGACATT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVQSLL*FLESDI
Trigger: AATGTCAGACTCCAGGAAGCACAGCAAGCTCTGAAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACAGCCTTACTCTGACTaGTTGAGACAGACTGATCCT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRQPYSD*LRQTDP
Trigger: AGGATCAGTCTGTCTCAAGCAGTCAGAGTAAGGCTG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCCCACAACTGGTGGCTaGTCTGCAGATCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMPTTGG*SADLWE
Trigger: TTCCCAGAGATCTGCAGAGCAGCCACCAGTTGTGGG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGACTGCTGGTGGCATCTaGACTGCTGGAGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMTAGGI*TAGVYG
Trigger: GCCATACACTCCAGCAGTGCAGATGCCACCAGCAGT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGCATACTCGACCCGGCTaGATGGCTTGGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKHTRPG*MAWSGV
Trigger: GACACCACTCCAAGCCATGCAGCCGGGTCGAGTATG...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGGAGCATGGAGAGACTaGACTCTCCGGATGGTAGGG +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKGAWRD*TLRMVG
Trigger: CCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTCCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGSGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGGA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTCTCTCCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGSLRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGGAGAGA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGTCCTGCTCCTCAGGCTaGTCTGCTTCTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRSCSSG*SASEAG
Trigger: CCCTGCCTCAGAAGCAGAGCAGCCTGAGGAGCAGGA...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAATCTTGGTGTGCCCTGTaGTCAGGAAGACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQSWCAL*SGRLQP
Trigger: GGGCTGCAGTCTTCCTGAGCACAGGGCACACCAAGA...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTTGTGTTTCAGGATGCTaGAAGGACAACTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRACVSGC*KDNSAG
Trigger: GCCCGCAGAGTTGTCCTTGCAGCATCCTGAAACACA...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTATCTGTGTTTCAGGATaGTGCAAGGACAACTCTGCG +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCICVSG*CKDNSA
Trigger: CGCAGAGTTGTCCTTGCAGCATCCTGAAACACAGAT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGAACAGTGTGTCGATCTaGGCAAGTTGTGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQNSVSI*ASCAAT
Trigger: AGTAGCTGCACAACTTGCGCAGATCGACACACTGTT...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTATCTCCAGGAATCTCTaGAACATCTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAISRNL*NICASC
Trigger: GCAAGAGGCGCAGATGTTCCAGAGATTCCTGGAGAT...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTTTTGGCACTGAGTTaGTCACTGACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVLALS*SLTGEL
Trigger: AAGTTCCCCAGTCAGTGACCAACTCAGTGCCAAAAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000524655.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTACTCCAATGTCTGGTaGGCTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMYSNVW*AQVNIL
Trigger: GAGGATGTTGACTTGAGCCCACCAGACATTGGAGTA...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGCTACTCCAATGTCTaGTGGGCTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAGYSNV*WAQVNI
Trigger: GATGTTGACTTGAGCCCACCAGACATTGGAGTAGCC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGCTTGCTGTGCTTCCTaGAGTCTGACATTGGCTACT +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSACCAS*SLTLAT
Trigger: AGTAGCCAATGTCAGACTCCAGGAAGCACAGCAAGC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTGGGGGATCTATTTGTaGCATCCCTTTCTTCAACGC +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGWGIYL*HPFLQR
Trigger: GCGTTGAAGAAAGGGATGCCACAAATAGATCCCCCA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTACCTGGTCCAGGGGCTaGACTTCAGATTCATATGCT +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCATWSRG*TSDSYA
Trigger: AGCATATGAATCTGAAGTCCAGCCCCTGGACCAGGT...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGCATTATTCTGGAGGTaGAACTGCTCTGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSALFWR*NCSAGR
Trigger: TCGACCAGCAGAGCAGTTCCACCTCCAGAATAATGC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGCATTATTCTGGAGGTaGAACTGCTCTGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEALFWR*NCSAGR
Trigger: TCGACCAGCAGAGCAGTTCCACCTCCAGAATAATGC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCCTGGTGCATTATTCTaGAGGTGGAACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFPGALF*RWNCSA
Trigger: AGCAGAGCAGTTCCACCTCCAGAATAATGCACCAGG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFTVETG*RLVLIQ
Trigger: TTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGTCCTTGGTGCTCATTTaGGCTGTTGCTGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQSLVLI*AVAGVV
Trigger: AACTACTCCAGCAACAGCCCAAATGAGCACCAAGGA...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCCAAAATCAGCAGTGGTaGGTTGTTCAGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPQNQQW*VVQPHP
Trigger: GGGATGTGGCTGAACAACCCACCACTGCTGATTTTG...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACAAAATCAGCAGTGGTaGGTTGTTCAGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSQNQQW*VVQPHP
Trigger: GGGATGTGGCTGAACAACCCACCACTGCTGATTTTG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTTACCTGCCCCACAACTaGTGGCTGCTCTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSYLPHN*WLLCRS
Trigger: AGATCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTA...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGCCTCTCTGGAACTaGAACTACTCCTTGAACCTT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRWPLWN*NYSLNL
Trigger: AAGGTTCAAGGAGTAGTTCCAGTTCCAGAGAGGCCA...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGGCCTCTCTGGAACTaGAACTACTCCTTGAACCTT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMWPLWN*NYSLNL
Trigger: AAGGTTCAAGGAGTAGTTCCAGTTCCAGAGAGGCCA...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCACTGCTGGAGTGTATaGCAGCAATCATCTTACTCT +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVHCWSV*QQSSYS
Trigger: AGAGTAAGATGATTGCTGCCATACACTCCAGCAGTG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATGGCATCTGCACTGCTaGAGTGTATGGCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAWHLHC*SVWQQS
Trigger: TGATTGCTGCCATACACTCCAGCAGTGCAGATGCCA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCTGGCATCTGCACTGCTaGAGTGTATGGCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIIWHLHC*SVWQQS
Trigger: TGATTGCTGCCATACACTCCAGCAGTGCAGATGCCA...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGAATTTGAACTGCTGGTaGCATCTGCACTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMNLNCW*HLHCWS
Trigger: ACTCCAGCAGTGCAGATGCCACCAGCAGTTCAAATT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGATAATTTGAACTGCTaGTGGCATCTGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMDNLNC*WHLHCW
Trigger: CCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCATGCAAACAGTTATCTaGACCAAAGGGTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIMQTVI*TKGFSG
Trigger: ACCACTGAACCCTTTGGTCCAGATAACTGTTTGCAT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTCTGGGGACGGTACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLLWGRY*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTACCGTCCCCAGAG...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTCCCGGCTGCATGGCTTaGAGTGGTGTCCAGATGCGT +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTPGCMA*SGVQMR
Trigger: ACGCATCTGGACACCACTCCAAGCCATGCAGCCGGG...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACTTCTGTCCGTGAAATaGGAACAGAGCGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRLLSVK*EQSESW
Trigger: CCATGATTCGCTCTGTTCCCATTTCACGGACAGAAG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGTCTTGGGCAGTAGGCTaGCTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMSWAVG*LIIWGN
Trigger: GTTCCCCCAGATGATGAGCCAGCCTACTGCCCAAGA...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTACACAGGGCCCCATCTaGACTGTAATAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCTQGPI*TVIGTR
Trigger: TCTAGTTCCTATTACAGTCCAGATGGGGCCCTGTGT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGGCTCTCTCTCCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFGSLSG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGGAGAGAGAGCC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGTCATGTTATCATATTaGGACATGACAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWVMLSY*DMTGPF
Trigger: GAAAGGGCCTGTCATGTCCCAATATGATAACATGAC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCTATGGCTTGCTTCTTaGTGTGCCCTGTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKLWLAS*CALCSG
Trigger: TCCTGAGCACAGGGCACACCAAGAAGCAAGCCATAG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGTGGCTCAGAAGTGTCTaGAATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQWLRSV*NPFGPI
Trigger: TATGGGTCCAAAGGGATTCCAGACACTTCTGAGCCA...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGTTGTGGTAGCTGACTaGCTCAGAAGTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQVVVAD*LRSVWN
Trigger: ATTCCAGACACTTCTGAGCCAGTCAGCTACCACAAC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTCGCTCCATCTCTTTaGAGAGCCTTACCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVAPSL*RALPLC
Trigger: ACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGCCGTGTGGTTGGTACTaGTACAGCACACTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKPCGWY*YSTLGS
Trigger: GGACCCCAGTGTGCTGTACCAGTACCAACCACACGG...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACACCGTGTGGTTGGTACTaGTACAGCACACTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTPCGWY*YSTLGS
Trigger: GGACCCCAGTGTGCTGTACCAGTACCAACCACACGG...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCACAGTCACACTGCTCTaGCGCTTGCCGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTTVTLL*RLPCGW
Trigger: CCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGGTCCTGCTCTGTGGATaGGGAAAGCCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRVLLCG*GKPGGT
Trigger: TGTGCCCCCTGGCTTTCCCCATCCACAGAGCAGGAC...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAGACAGGTTTCTCTACTaGGTTTCAGCACGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLDRFLY*VSARGF
Trigger: AAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTC...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCCTTAAAAGGCACAGATaGCACACAGGATTGAAGATC +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKILKRHR*HTGLKI
Trigger: GATCTTCAATCCTGTGTGCCATCTGTGCCTTTTAAG...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp CAGGGTCGCTCCATCTCTTTGGAGAGCCTTACCTCTTaGTGGTTCAGTCTTAAAGATTCTTGCCCGGATGCA +
Preference number: 4 (lower is better)
Translates to: QGRSISLESLTS*WFSLKDSCPDA
Trigger: TGCATCCGGGCAAGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGCCATCTTCGGAAAGTaGCCTTTAGTGAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAAIFGK*PLVKGN
Trigger: GTTACCCTTCACTAAAGGTCACTTTCCGAAGATGGC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGGCCATCTTCGGAAAGTaGCCTTTAGTGAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKEAIFGK*PLVKGN
Trigger: GTTACCCTTCACTAAAGGTCACTTTCCGAAGATGGC...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTCGACAGCAGGAGTGTTaGTGGATGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRARQQEC*WMTPHE
Trigger: TTCATGAGGAGTCATCCATCAACACTCCTGCTGTCG...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTAATGCTGTGCAGCTTTaGAGAACCTGCGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRANAVQL*RTCGTS
Trigger: TGAAGTGCCGCAGGTTCTTCAAAGCTGCACAGCATT...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGACAACGTGATTCAGGATaGACTCAACAACCACAGACT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRQRDSG*TQQPQT
Trigger: AGTCTGTGGTTGTTGAGTTCATCCTGAATCACGTTG...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGATGATTTCCCCAAGTTaGAAAAGGAACGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMMISPS*KRNASY
Trigger: GTAGCTGGCGTTCCTTTTTCAACTTGGGGAAATCAT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAATGATTTCCCCAAGTTaGAAAAGGAACGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRMISPS*KRNASY
Trigger: GTAGCTGGCGTTCCTTTTTCAACTTGGGGAAATCAT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTCATGGCTTTCATCTCTaGAGGCTCACTCTCATTCCG +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAHGFHL*RLTLIP
Trigger: CGGAATGAGAGTGAGCCTTCAGAGATGAAAGCCATG...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTGTCAACATCCTCAGCTaGATGAGGAGACATAAGGGC +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAVNILS*MRRHKG
Trigger: GCCCTTATGTCTCCTCATTCAGCTGAGGATGTTGAC...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGTAACTGCTCCTGTCTaGGTCTGTCCAGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKVTAPV*VCPEAT
Trigger: TGTAGCTTCTGGACAGACTCAGACAGGAGCAGTTAC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGTTAAGTCTACTTGGTaGTGTTGCTCCCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGVKSTW*CCSPDS
Trigger: TGAATCTGGGGAGCAACATCACCAAGTAGACTTAAC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGCAAATTCTAAAGGGTaGTGGAGTTTATCCACACTT +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVANSKG*WSLSTL
Trigger: AAGTGTGGATAAACTCCATCACCCTTTAGAATTTGC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAAGTTCTGTGCGTGCGCTaGAGTGTGGCAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQVLCVR*SVAAAK
Trigger: TTTTGCTGCTGCCACACTTCAGCGCACGCACAGAAC...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTTGCTCCAATTTATTGTaGTGGGGAGGTACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTCSNLL*WGGTLW
Trigger: CCAGAGTGTACCTCCCCATCACAATAAATTGGAGCA...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKGNFCP*NGNRAN
Trigger: ATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCGGGCCTGGGAGGACTaGTATGGCTTATATTGGTAC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMRAWED*YGLYWY
Trigger: GTACCAATATAAGCCATATCAGTCCTCCCAGGCCCG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCAGTGACATGATAATCTaGGCGGGCCTGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTSDMII*AGLGGL
Trigger: CAGTCCTCCCAGGCCCGCTCAGATTATCATGTCACT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTGTCCTCAAGATCCCATaGGGTGTAGGTGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSVLKIP*GVGVLH
Trigger: GTGAAGCACACCTACACCTCATGGGATCTTGAGGAC...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATACTACGCAGATGGATaGCATAGATCCCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLYYADG*HRSHPS
Trigger: ACTTGGGTGGGATCTATGTCATCCATCTGCGTAGTA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCCTCTCCCTCGGGACTaGTGGCCTTGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHPLPRD*WPWLHG
Trigger: GCCATGCAGCCAAGGCCATCAGTCCCGAGGGAGAGG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCAGAGTTGTGGTAGCTaGCTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMQSCGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAGTCAGCTACCACAACTCTG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGGTGGGACGATTGACTaGGTGAGGTGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKGGTID*VRCSSS
Trigger: GGAGGAAGAACACCTCACTCAGTCAATCGTCCCACC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAAAGGGGGTGGGACGATTaGCTGAGTGAGGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQRGWDD*LSEVFF
Trigger: GAAGAACACCTCACTCAGTCAATCGTCCCACCCCCT...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGACGGGGAGAATGAAGTaGCAACAGTGTGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKTGRMK*QQCVDL
Trigger: CAGATCGACACACTGTTGTCACTTCATTCTCCCCGT...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTTCCACGACTCTAACTaGACACAAGATCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGFHDSN*TQDPSQ
Trigger: CTGAGAAGGATCTTGTGTTCAGTTAGAGTCGTGGAA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAATGTTGCCAACTGTCTaGCTGACCTTGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAMLPTV*LTLKDQ
Trigger: CTGATCCTTCAAGGTCAGTCAGACAGTTGGCAACAT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGACATGCAAATGCTGTTaGAAACACATCTGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWTCKCC*KHIWFR
Trigger: TCTGAACCAGATGTGTTTTCAACAGCATTTGCATGT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTATATTTCATCTCACTaGTATCTTCCCCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSYISSH*YLPLLT
Trigger: GGTAAGAAGGGGAAGATATCAGTGAGATGAAATATA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAAACATCTGCGCCTCTTaGCATTGCGCTAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLNICAS*HCAKSF
Trigger: GAAACTCTTAGCGCAATGGCAAGAGGCGCAGATGTT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTACGGAGGGTTCCTTCTaGCCTGCCACCTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTTEGSF*PATFQS
Trigger: GCTCTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGT...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAAAAAGAGGCAGACAGTaGATCACTGGAAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSKRGRQ*ITGRSG
Trigger: CCCAGATCTTCCAGTGATGCACTGTCTGCCTCTTTT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGAGGTGGAACTGCTCTaGTGGTCGATCGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMEVELL*WSIGLE
Trigger: TTCCAAACCGATCGACCAGCAGAGCAGTTCCACCTC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGCTCATTTGGGCTGTTaGTGGAGTAGTTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRAHLGC*WSSCHV
Trigger: TACATGACAACTACTCCAGCAACAGCCCAAATGAGC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCCCACAACTGGTGGCTaGTCTGCAGATCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTPTTGG*SADLWE
Trigger: TTCCCAGAGATCTGCAGAGCAGCCACCAGTTGTGGG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGTCTCAACTGGACTGTaGCATAGGCATCCACATCAC +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKVSTGL*HRHPHH
Trigger: GTGATGTGGATGCCTATGGCACAGTCCAGTTGAGAC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTCCGGATGGACTGCATaGGGTATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSGWTA*GIFPCP
Trigger: AGGACATGGAAAAATACCGCATGCAGTCCATCCGGA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTCTCTCCGGATGGACTaGATGCGGTATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSSLRMD*MRYFSM
Trigger: CATGGAAAAATACCGCATGCAGTCCATCCGGAGAGA...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTTTGACTCACAGAACTaGCTATGGCTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMFDSQN*LWLASW
Trigger: CCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAA...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCAGTCTTAAAGATTCTTaGCCGGATGCAGCATATTTT +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSSLKDS*PDAAYF
Trigger: AAAATATGCTGCATCCGGGCAAGAATCTTTAAGACT...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCACACAACAGTCACACTaGTCTGGCGCTTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTTQQSH*SGACRV
Trigger: CACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCATCTGTGTTTCAGGATaGTGCAAGGACAACTCTGCG +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFICVSG*CKDNSA
Trigger: CGCAGAGTTGTCCTTGCAGCATCCTGAAACACAGAT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCAAGGGGCAATGGGTTaGCTACTTGACAAGAATATG +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQQGAMG*LLDKNM
Trigger: CATATTCTTGTCAAGTAGGCAACCCATTGCCCCTTG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGCCCAAGCCATGTGGTTaGAATGAATCTGTACCCATT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGPKPCG*NESVPI
Trigger: AATGGGTACAGATTCATTGCAACCACATGGCTTGGG...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACACTGAGTGACCGACTCTaGACTGTCCTTCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTLSDRL*TVLQGV
Trigger: GACACCCTGAAGGACAGTCCAGAGTCGGTCACTCAG...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGTACCTCTTGATAACATaGGCAGCACCGACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKYLLIT*AAPTAG
Trigger: TCCTGCTGTCGGTGCTGCCCATGTTATCAAGAGGTA...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGCTGGATGACATCGTaGATTTTTATCAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWCWMTS*IFISLS
Trigger: AGAAAGGCTGATAAAAATCCACGATGTCATCCAGCA...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTCAGACAGTGCATCACTaGAAGATCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAQTVHH*KIWVFW
Trigger: CCAGAAGACCCAGATCTTCCAGTGATGCACTGTCTG...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATACTCCAATGTCTGGTaGGCTCAAGTCAACATCCTC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAYSNVW*AQVNIL
Trigger: GAGGATGTTGACTTGAGCCCACCAGACATTGGAGTA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGATCAAAATCCAGGCTaGCTACTCCAATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSDQNPG*LLQCLV
Trigger: CACCAGACATTGGAGTAGCCAGCCTGGATTTTGATC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAATGCATTCTGAGCTGTaGTATTTGAGACTGTACCAA +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVMHSEL*YLRLYQ
Trigger: TTGGTACAGTCTCAAATACCACAGCTCAGAATGCAT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCGTGGAACTGCTCTGCTaGTCGATCGGTTTGGAAATA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFVELLC*SIGLEI
Trigger: TATTTCCAAACCGATCGACCAGCAGAGCAGTTCCAC...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGTGGAACTGCTCTGCTaGTCGATCGGTTTGGAAATA +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTVELLC*SIGLEI
Trigger: TATTTCCAAACCGATCGACCAGCAGAGCAGTTCCAC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGATGGTCACAGTTTCCTaGTGCATTATTCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQMVTVS*CIILEV
Trigger: CACCTCCAGAATAATGCACCAGGAAACTGTGACCAT...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACATACCTGCCCCACAACTaGTGGCTGCTCTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTYLPHN*WLLCRS
Trigger: AGATCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTA...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTTGGCATCTGCACTGCTaGAGTGTATGGCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAWHLHC*SVWQQS
Trigger: TGATTGCTGCCATACACTCCAGCAGTGCAGATGCCA...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCTCTGGGGACGGTACTaGCAGTTTGGAGTCATATTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKLWGRY*QFGVIL
Trigger: CAATATGACTCCAAACTGCCAGTACCGTCCCCAGAG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCTGGCACCATACACTTaGTGCTGCTCCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMLAPYT*CCSNLL
Trigger: CAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGCTGGTGGCTCTGACCTaGCACCATACACTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKLVALT*HHTLGA
Trigger: AGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAG...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCTGCATGGCTTGGAGTaGTGTCCAGATGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKLHGLE*CPDAFL
Trigger: AAGAAACGCATCTGGACACCACTCCAAGCCATGCAG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCTGGGAGGACTGATATaGCTTATATTGGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQLGGLI*LILVQR
Trigger: CCTCTGTACCAATATAAGCCATATCAGTCCTCCCAG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCACACAGGGCCCCATCTaGACTGTAATAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFTQGPI*TVIGTR
Trigger: TCTAGTTCCTATTACAGTCCAGATGGGGCCCTGTGT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAATGGCCTTGGCTGCATaGCGGCTCTCCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTMALAA*RLSFPS
Trigger: AGAAGGAAAGGAGAGCCGCCATGCAGCCAAGGCCAT...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATGGCTCAGAAGTGTCTaGAATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLWLRSV*NPFGPI
Trigger: TATGGGTCCAAAGGGATTCCAGACACTTCTGAGCCA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGTTGTGGTAGCTGACTaGCTCAGAAGTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTVVVAD*LRSVWN
Trigger: ATTCCAGACACTTCTGAGCCAGTCAGCTACCACAAC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGCTATGACTCCTCTCTaGTTTAGGGGGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMAMTPL*FRGWDD
Trigger: ATCGTCCCACCCCCTAAACCAGAGAGGAGTCATAGC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCACTGGTACAGCACACTaGGGTCCCTCTCCACGTTCT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTTGTAH*GPSPRS
Trigger: AGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAAGGGCTCATTCTGCATaGATCTGTGTTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLRAHSA*ICVSGC
Trigger: GCATCCTGAAACACAGATCCATGCAGAATGAGCCCT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCAGGGCTCATTCTGCATaGATCTGTGTTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIIRAHSA*ICVSGC
Trigger: GCATCCTGAAACACAGATCCATGCAGAATGAGCCCT...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCTGCCAACATCCTAAATaGGTGACTGACAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPCQHPK*VTDRAE
Trigger: TTCAGCCCTGTCAGTCACCCATTTAGGATGTTGGCA...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAACAGAATGGATGTCCTaGACATACGGTTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEATEWMS*TYGSFV
Trigger: GACGAAAGAACCGTATGTTCAGGACATCCATTCTGT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTGGCATCTGCACTGCTGGAGTGTATGGCAGCAATCATCTTACTCTCCATCATCACAGAATGGATGTCCTaGACATACGGTTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: VASALLECMAAIILLSIITEWMS*TYGSFV
Trigger: GACGAAAGAACCGTATGTTCAGGACATCCATTCTGT...GATGATGGAGAGTAAGATGATTGCTGCCATACACTCCAGCAGTGCAGATGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGSTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCAACGTGATTCAGGATaGACTCAACAACCACAGACT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFQRDSG*TQQPQT
Trigger: AGTCTGTGGTTGTTGAGTTCATCCTGAATCACGTTG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAACAGCACATCAACGTaGTTCAGGATGAACTCAACA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGNSTST*FRMNST
Trigger: TGTTGAGTTCATCCTGAATCACGTTGATGTGCTGTT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCACAATTGGAGAATTaGCCTGAGCTTGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASQLEN*PELVFV
Trigger: CACGAACACAAGCTCAGGTCAATTCTCCAATTGTGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGCTGCTTGAGACAGACTaGTCCTCTTTCCCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMLLETD*SSFPGN
Trigger: ATTGCCAGGGAAAGAGGATCAGTCTGTCTCAAGCAG...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACTTACTCTGACTGCTTaGGACAGACTGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSLTLTA*DRLILF
Trigger: AAAGAGGATCAGTCTGTCTCAAGCAGTCAGAGTAAG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGCTTACTCTGACTGCTTaGGACAGACTGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKELTLTA*DRLILF
Trigger: AAAGAGGATCAGTCTGTCTCAAGCAGTCAGAGTAAG...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTTGGGATAAGAGAGACTaGACTGACAGGAACGGAATC +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAWDKRD*TDRNGI
Trigger: GATTCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGGTGGAGACTGGTCCTaGTCCAAGAAGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTGGDWS*SKKETV
Trigger: AACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGAAGGCTGAAGCTGAGTaGCATGATAATCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMKAEAE*HDNLSG
Trigger: CCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCTATCATATTGGGACATaGCAGGCCCTTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPYHIGT*QALSPS
Trigger: AGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATA...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATATCATATTGGGACATaGCAGGCCCTTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSYHIGT*QALSPS
Trigger: AGAAGGTGAAAGGGCCTGTCATGTCCCAATATGATA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTGGACGATTGACTGAGTaGGGTGTTCTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSGRLTE*GVLPPC
Trigger: ACAAGGAGGAAGAACACCTCACTCAGTCAATCGTCC...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATTCCACGACTCTAACTaGACACAAGATCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSFHDSN*TQDPSQ
Trigger: CTGAGAAGGATCTTGTGTTCAGTTAGAGTCGTGGAA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTGGTGAAACGGGGCTGTaGACTAAGCAGTTATTGCAG +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSGETGL*TKQLLQ
Trigger: CTGCAATAACTGCTTAGTTCACAGCCCCGTTTCACC...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCTGCCTCTCCACCATGTaGTTAACACTTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTCLSTM*LTLSGA
Trigger: TGCCCCCGAAAGTGTTAAGCACATGGTGGAGAGGCA...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAATATCTCTCAATGAATaGTGTGCAGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVISLNE*CAALKN
Trigger: GTTCTTCAAAGCTGCACAGCATTCATTGAGAGATAT...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTGAGCTTGTGTTCGTaGCTGGGCCTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLSLCS*LGLFQC
Trigger: ACATTGGAAGAGGCCCAGGCACGAACACAAGCTCAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGACTTCAGATTCATATaGTTCTTGGGCAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMDFRFI*FLGNCL
Trigger: GAGACAGTTGCCCAAGAAGCATATGAATCTGAAGTC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGCAGCCTTACTCTGACTaGTTGAGACAGACTGATCCT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKQPYSD*LRQTDP
Trigger: AGGATCAGTCTGTCTCAAGCAGTCAGAGTAAGGCTG...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTGTCACAGTTTCCTGGTaGATTATTCTGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAVTVSW*IILEVE
Trigger: TTCCACCTCCAGAATAATGCACCAGGAAACTGTGAC...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGTCACAGTTTCCTGGTaGATTATTCTGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAVTVSW*IILEVE
Trigger: TTCCACCTCCAGAATAATGCACCAGGAAACTGTGAC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGAGTTTATCCACACTTaGACCAAGATAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQEFIHT*TKIRRR
Trigger: CCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGAGTTTATCCACACTTaGACCAAGATAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGEFIHT*TKIRRR
Trigger: CCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR GCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTGCTCATTTGGGCTGTTaGTGGAGTAGTTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTAHLGC*WSSCHV
Trigger: TACATGACAACTACTCCAGCAACAGCCCAAATGAGC...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGATGGCTTCTCCGGCTaGGTGCTACCATGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKDGFSG*VLPWPP
Trigger: CGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAGATGGCTTCTCCGGCTaGGTGCTACCATGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKDGFSG*VLPWPP
Trigger: CGGAGGCCATGGTAGCACGCAGCCGGAGAAGCCATC...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATTTGACTCACAGAACTaGCTATGGCTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLFDSQN*LWLASW
Trigger: CCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTAGATTCTTGCCCGGATaGAGCATATTTTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCRFLPG*SIFYSR
Trigger: TCTGGAGTAAAATATGCTGCATCCGGGCAAGAATCT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTCTGCTTCAACTCTATTaGTCGCAGGGCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSLLQLY*SQGSFC
Trigger: GCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAG...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAACACAACAGGGAATaGAGACGCCTACCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKEHNRE*RRLPGN
Trigger: ATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGAGGATACAACAGCTCTaGATTCCGTACAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMRIQQL*IPYKSV
Trigger: TACACTCTTGTACGGAATGCAGAGCTGTTGTATCCT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392657.7
CDS-3UTR GCA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGAGCTACGCAGTTGTaGAAAAATTATCCACGAATT +
Preference number: 4 (lower is better)
Translates to: GKGTISSVRALKCGSSKIRATQL*KNYPRI
Trigger: AATTCGTGGATAATTTTTGCACAACTGCGTAGCTCT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCGAAACCTTAGCATTCTaGATACTACATTCTCTCATT +
Preference number: 4 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSETLAF*ILHSLI
Trigger: AATGAGAGAATGTAGTATGCAGAATGCTAAGGTTTC...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTATGAGAGGTTTTAAATaGGAGATGAGGTTGCCTATG +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVMRGFK*EMRLPM
Trigger: CATAGGCAACCTCATCTCGCATTTAAAACCTCTCAT...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATCACAGTCAGTCACCTaGATTATAACTTCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRSQSVT*IITSDS
Trigger: GGAGTCTGAAGTTATAATCCAGGTGACTGACTGTGA...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGATCAAAATCCAGGCTaGCTACTCCAATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKDQNPG*LLQCLV
Trigger: CACCAGACATTGGAGTAGCCAGCCTGGATTTTGATC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTGCTTGCTGTGCTTCCTaGAGTCTGACATTGGCTACT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSACCAS*SLTLAT
Trigger: AGTAGCCAATGTCAGACTCCAGGAAGCACAGCAAGC...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAGTCCAGGGTAAAGAATaGACTCAGTTTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLVQGKE*TQFLLK
Trigger: CTTCAGGAGAAACTGAGTCCATTCTTTACCCTGGAC...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTAGATTCATATGCTTCTTaGGCAACTGTCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVDSYAS*ATVSFV
Trigger: AACAAATGAGACAGTTGCCCAAGAAGCATATGAATC...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTACCTGGTCCAGGGGCTaGACTTCAGATTCATATGCT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSTWSRG*TSDSYA
Trigger: AGCATATGAATCTGAAGTCCAGCCCCTGGACCAGGT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCACTGATCCTCTTTCCCTaGCAATTCTACTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEALILFP*QFYFFS
Trigger: GCTGAAGAAGTAGAATTGCCAGGGAAAGAGGATCAG...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTCTGATCCTCTTTCCCTaGCAATTCTACTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTLILFP*QFYFFS
Trigger: GCTGAAGAAGTAGAATTGCCAGGGAAAGAGGATCAG...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCACTGTTCTTCCCAGACTaGTCTTCAGGGAAACTTACA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEALFFPD*SSGKLT
Trigger: TGTAAGTTTCCCTGAAGACCAGTCTGGGAAGAACAG...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTCATTTGGGCTGTTGCTaGAGTAGTTGTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCHLGCC*SSCHVS
Trigger: ACTTACATGACAACTACTCCAGCAACAGCCCAAATG...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTTTCAGGTGGCCTCTCTaGAACTGGAACTACTCCTTG +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSFRWPL*NWNYSL
Trigger: CAAGGAGTAGTTCCAGTTCCAGAGAGGCCACCTGAA...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGATGCAAACAGTTATCTaGACCAAAGGGTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGMQTVI*TKGFSG
Trigger: ACCACTGAACCCTTTGGTCCAGATAACTGTTTGCAT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAATGCAAACAGTTATCTaGACCAAAGGGTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRMQTVI*TKGFSG
Trigger: ACCACTGAACCCTTTGGTCCAGATAACTGTTTGCAT...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTACGGTACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVTVLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTACCGT...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCTATAACGAAGACCCATaGAGGCTGGTGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTYNEDP*RLVALT
Trigger: GGTCAGAGCCACCAGCCTCCATGGGTCTTCGTTATA...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAGATGCGTTTCTTCCTaGGGCCACATATGTGTTATA +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGRCVSS*GHICVI
Trigger: TATAACACATATGTGGCCCCAGGAAGAAACGCATCT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTAGATGCGTTTCTTCCTaGGGCCACATATGTGTTATA +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCRCVSS*GHICVI
Trigger: TATAACACATATGTGGCCCCAGGAAGAAACGCATCT...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACTGGGAGGACTGATATaGCTTATATTGGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSLGGLI*LILVQR
Trigger: CCTCTGTACCAATATAAGCCATATCAGTCCTCCCAG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCTACATTATGGTCGTTaGGAGAGAAATAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQLHYGR*ERNSQS
Trigger: TGACTGGCTATTTCTCTCCCAACGACCATAATGTAG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGGCTCTCTCTCCGGATaGACTGCATGCGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMGSLSG*TACGIF
Trigger: AAAAATACCGCATGCAGTCCATCCGGAGAGAGAGCC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCCAGGTTATCATACTaGGACACAACAGTCACACTG +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASRLSY*DTTVTL
Trigger: CAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGAAGTCACACACAAGGTaGACTGTGCTGAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMKSHTR*TVLRYP
Trigger: CGGATACCTCAGCACAGTCCACCTTGTGTGTGACTT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAATGCTGTGCAGCTTTaGAGAACCTGCGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKNAVQL*RTCGTS
Trigger: TGAAGTGCCGCAGGTTCTTCAAAGCTGCACAGCATT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAAATGCTGTGCAGCTTTaGAGAACCTGCGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTNAVQL*RTCGTS
Trigger: TGAAGTGCCGCAGGTTCTTCAAAGCTGCACAGCATT...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATGCCATATCTCTCAATaGATGCTGTGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLCHISQ*MLCSFE
Trigger: TTCAAAGCTGCACAGCATTCATTGAGAGATATGGCA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGTCAACATCCTCAGCTaGATGAGGAGACATAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKVNILS*MRRHKG
Trigger: GCCCTTATGTCTCCTCATTCAGCTGAGGATGTTGAC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATCAGGGAAACTTACATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSSGKLT*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGTAAGTTTCCCTGA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTCAGGGAAACTTACATaGTCATCAGACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSSGKLT*SSDFSE
Trigger: CTCAGAGAAGTCTGATGATCATGTAAGTTTCCCTGA...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTGGTGGAGACTGGTCCTaGTCCAAGAAGGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTGGDWS*SKKETV
Trigger: AACTGTCTCCTTCTTGGATCAGGACCAGTCTCCACC...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATGTAGCCATGGGACACTaGGCAGCAGCAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHVAMGH*AAAAPL
Trigger: CAGTGGTGCTGCTGCTGCTCAGTGTCCCATGGCTAC...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTAAAGGAATGATAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSKGMII*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTATCATTCCTTT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGGAGGCTGGTGGCTCTaGCCTGGCACCATACACTTG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFGGWWL*PGTIHL
Trigger: CAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGTACTACGCAGATGGATaGCATAGATCCCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMYYADG*HRSHPS
Trigger: ACTTGGGTGGGATCTATGTCATCCATCTGCGTAGTA...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAAGTTTTCCCAGGATCTaGTTTACTACGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEASFPRI*FTTQMD
Trigger: ATCCATCTGCGTAGTAAATCAGATCCTGGGAAAACT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGTTTTCCCAGGATCTaGTTTACTACGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSFPRI*FTTQMD
Trigger: ATCCATCTGCGTAGTAAATCAGATCCTGGGAAAACT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AAACAGTTATCTGGACCAAAGGGTTCAGTGGTGACATCGGGCCTAGCAAAGGAGAGTTTTCCCAGGATCTaGTTTACTACGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: KQLSGPKGSVVTSGLAKESFPRI*FTTQMD
Trigger: ATCCATCTGCGTAGTAAATCAGATCCTGGGAAAACT...CTCCTTTGCTAGGCCCGATGTCACCACTGAACCCTTTGGTCCAGATAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGCAGAGTTGTGGTAGCTaGCTGGCTCAGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRQSCGS*LAQKCL
Trigger: CAGACACTTCTGAGCCAGTCAGCTACCACAACTCTG...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGATAAAGAGCTATACCTaGAATGCTGGTGTAGATGGT +
Preference number: 4 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGIKSYT*NAGVDG
Trigger: ACCATCTACACCAGCATTTCAGGTATAGCTCTTTAT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTACTGCATCCCTCCAATaGATTCTAAGGGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSTASLQ*ILREQK
Trigger: CTTTTGTTCCCTTAGAATTCATTGGAGGGATGCAGT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATGTAACACACAGTGCTaGAAATCACATGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEACNTQC*KSHASN
Trigger: GTTAGAGGCATGTGATTTTCAGCACTGTGTGTTACA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTGTTTTAAATGCGAGATaGGGTTGCCTATGGCATAAT +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCVLNAR*GCLWHN
Trigger: ATTATGCCATAGGCAACCTCATCTCGCATTTAAAAC...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCGTGAAAGCTGTATGCTaGCGAACTCAACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPVKAVC*RTQHSH
Trigger: ATGAGAATGTTGAGTTCGGCAGCATACAGCTTTCAC...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp CTGAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGAGCTACTACCTGTTTCTaGATCCTTTTTATTGGCACT +
Preference number: 4 (lower is better)
Translates to: LKEKQEHNRECRRLPGNRATTCF*ILFIGT
Trigger: AGTGCCAATAAAAAGGATGCAGAAACAGGTAGTAGC...TCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGTTCAGAGCTTGCTGTaGTTCCTGGAGTCTGACATT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMVQSLL*FLESDI
Trigger: AATGTCAGACTCCAGGAAGCACAGCAAGCTCTGAAC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGAGTTTATCCACACTTaGACCAAGATAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSEFIHT*TKIRRR
Trigger: CCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTGGAAAGCCACAGGGATaGGCAGGGACAGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFGKPQG*AGTDSA
Trigger: CGCCGAGTCTGTCCCTGCGCATCCCTGTGGCTTTCC...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGCTTCTCCGGCTGCGTaGTACCATGGCCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKASPAA*YHGLRD
Trigger: ATCACGGAGGCCATGGTAGCACGCAGCCGGAGAAGC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACACTGCTTCAACTCTATTaGTCGCAGGGCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTLLQLY*SQGSFC
Trigger: GCAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAG...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATGAGTTGGTCACTGACTaGGGAACTTTTTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNELVTD*GTFWLI
Trigger: AATTAACCAAAAAGTTCCCCAGTCAGTGACCAACTC...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGTCACCATCAACTGCATaGAGAGATGTAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKSPSTA*RDVRDS
Trigger: GGAGTCTCTTACATCTCTCCATGCAGTTGATGGTGA...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGCATCACTGGAAGATCTaGGTCTTCTGGGTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKHHWKI*VFWVGR
Trigger: TCTTCCGACCCAGAAGACCCAGATCTTCCAGTGATG...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCATCACTGGAAGATCTaGGTCTTCTGGGTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTHHWKI*VFWVGR
Trigger: TCTTCCGACCCAGAAGACCCAGATCTTCCAGTGATG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAACATCACTGGAAGATCTaGGTCTTCTGGGTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQHHWKI*VFWVGR
Trigger: TCTTCCGACCCAGAAGACCCAGATCTTCCAGTGATG...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGCACTTGGTTTATCCTTaGAGTATCCTGGTGAATCTA +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMHLVYP*SILVNL
Trigger: TAGATTCACCAGGATACTCCAAGGATAAACCAAGTG...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGCAGTGGTGGGTTGTTCTTTTTATTGGCACTTaGTTTATCCTTGGAGTATCC +
Preference number: 4 (lower is better)
Translates to: FCACAEVWQQQNQQWWVVLFIGT*FILGVS
Trigger: GGATACTCCAAGGATAAACCAAGTGCCAATAAAAAG...AACAACCCACCACTGCTGATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGCTGCATCCTTTTTATTaGCACTTGGTTTATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQLHPFY*HLVYPW
Trigger: CCAAGGATAAACCAAGTGCCAATAAAAAGGATGCAG...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGTGGGGGATCTATTTGTaGCATCCCTTTCTTCAACGC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMWGIYL*HPFLQR
Trigger: GCGTTGAAGAAAGGGATGCCACAAATAGATCCCCCA...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCTCTTTACTATCTGGGTaGGGGATCTATTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPSLLSG*GIYLWH
Trigger: ATGCCACAAATAGATCCCCCACCCAGATAGTAAAGA...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTATGGTCACAGTTTCCTaGTGCATTATTCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRAMVTVS*CIILEV
Trigger: CACCTCCAGAATAATGCACCAGGAAACTGTGACCAT...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTCATGTAAGTCATGGTaGCTGTGCTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSCKSW*LCWYSL
Trigger: AAGAGAATACCAGCACAGCCACCATGACTTACATGA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCTTGTCATGTAAGTCATaGTGGCTGTGCTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPLSCKS*WLCWYS
Trigger: AGAATACCAGCACAGCCACCATGACTTACATGACAA...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTATTGTCATGTAAGTCATaGTGGCTGTGCTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLLSCKS*WLCWYS
Trigger: AGAATACCAGCACAGCCACCATGACTTACATGACAA...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TCTTTAGGCTCTCAGTTACTTAAAGCCGTGTGTATCTCCTGGTCACAGCAGCCCCATTTGGGCTGTTGCTaGAGTAGTTGTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: SLGSQLLKAVCISWSQQPHLGCC*SSCHVS
Trigger: ACTTACATGACAACTACTCCAGCAACAGCCCAAATG...GGGCTGCTGTGACCAGGAGATACACACGGCTTTAAGTAACTGAGAGCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCACATTTGGGCTGTTGCTaGAGTAGTTGTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSHLGCC*SSCHVS
Trigger: ACTTACATGACAACTACTCCAGCAACAGCCCAAATG...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCTTCAGGTGGCCTCTCTaGAACTGGAACTACTCCTTG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTFRWPL*NWNYSL
Trigger: CAAGGAGTAGTTCCAGTTCCAGAGAGGCCACCTGAA...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAATCAGGCAGGCCTGGCTaGACAGCTGTAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKSGRPG*TAVAMG
Trigger: TCCCATGGCTACAGCTGTCCAGCCAGGCCTGCCTGA...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTGCATGGCTTGGAGTaGTGTCCAGATGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLHGLE*CPDAFL
Trigger: AAGAAACGCATCTGGACACCACTCCAAGCCATGCAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGAAGACGGCGGAGCATaGAGAGACTGCACTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFEDGGA*RDCTLR
Trigger: CCGGAGAGTGCAGTCTCTCCATGCTCCGCCGTCTTC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGAAGAACTGGAATATaGGCTATACCTGTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFRRTGI*AIPVVD
Trigger: GTCCACTACAGGTATAGCCCATATTCCAGTTCTTCT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTCTACATTATGGTCGTTaGGAGAGAAATAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCALHYGR*ERNSQS
Trigger: TGACTGGCTATTTCTCTCCCAACGACCATAATGTAG...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGTCGCTCCATCTCTTTaGAGAGCCTTACCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMVAPSL*RALPLC
Trigger: ACAAAGAGGTAAGGCTCTCCAAAGAGATGGAGCGAC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGCCTTGTAGCAGTCTCTaGAGTGTTTCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRPCSSL*SVSLGQ
Trigger: CTGCCCCAGAGAAACACTCCAGAGACTGCTACAAGG...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGACAGGTTTCTCTACTaGGTTTCAGCACGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKDRFLY*VSARGF
Trigger: AAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGTCTCCAAGGGGCAATaGGTTGCCTACTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTVSKGQ*VAYLTR
Trigger: TCTTGTCAAGTAGGCAACCCATTGCCCCTTGGAGAC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTGATTCCACCTTAGTCTaGCCAAAGATAATCCTCATA +
Preference number: 4 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCDSTLV*PKIILI
Trigger: TATGAGGATTATCTTTGGCCAGACTAAGGTGGAATC...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp CCCCTTCTTACCTTGTGGGAATTATTTAATCCTATATaGGTTGCTGCTTGTACCTGCCCCACAACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLLTLWELFNPI*VAACTCPTTGG
Trigger: GCCACCAGTTGTGGGGCAGGTACAAGCAGCAACCAATATAGGATTAAATAATTCCCACAAGGTAAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAGGAGTGTTGATGGATaGCTCCTCATGAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSRSVDG*LLMNQK
Trigger: CTTTTGGTTCATGAGGAGTCATCCATCAACACTCCT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGACAGAATGGATGTCCTaGACATACGGTTCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMTEWMS*TYGSFV
Trigger: GACGAAAGAACCGTATGTTCAGGACATCCATTCTGT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGCTGCTTGAGACAGACTaGTCCTCTTTCCCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRLLETD*SSFPGN
Trigger: ATTGCCAGGGAAAGAGGATCAGTCTGTCTCAAGCAG...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGCAAATTCTAAAGGGTaGTGGAGTTTATCCACACTT +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSANSKG*WSLSTL
Trigger: AAGTGTGGATAAACTCCATCACCCTTTAGAATTTGC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGGTTCTGTGCGTGCGCTaGAGTGTGGCAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPVLCVR*SVAAAK
Trigger: TTTTGCTGCTGCCACACTTCAGCGCACGCACAGAAC...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAACTGGAACTACTCCTTaGACCTTGTGGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLTGTTP*TLWELF
Trigger: AAATAATTCCCACAAGGTTCAAGGAGTAGTTCCAGT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGGGGAACTTCTGTCCGTaGAATGGGAACAGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRGNFCP*NGNRAN
Trigger: ATTCGCTCTGTTCCCATTTCACGGACAGAAGTTCCC...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAAGTTGTGCAGCTACTaGAGGAGAAGCAGGAACACA +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKKLCSY*RRSRNT
Trigger: TGTGTTCCTGCTTCTCCTTCAGTAGCTGCACAACTT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGATGTTGCCAACTGTCTaGCTGACCTTGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKMLPTV*LTLKDQ
Trigger: CTGATCCTTCAAGGTCAGTCAGACAGTTGGCAACAT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAAAAGTGAAAGCTGTATaGTGCCGAACTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSKVKAV*CRTQHS
Trigger: AGAATGTTGAGTTCGGCAGCATACAGCTTTCACTTT...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGTAATGAGCTTGCCGTaGTTTTTAGACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAVMSLP*FLDTGF
Trigger: AAAACCAGTGTCTAAAAAGCACGGCAAGCTCATTAC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAAGAATCACCATCAACTaGATGGAGAGATGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEARITIN*MERCKR
Trigger: TCTCTTACATCTCTCCATGCAGTTGATGGTGATTCT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAAAAGAGGCAGACAGTaGATCACTGGAAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKKRGRQ*ITGRSG
Trigger: CCCAGATCTTCCAGTGATGCACTGTCTGCCTCTTTT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCTCCTATATTGGTTGCTaGTTGTACCTGCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTSYIGC*LYLPHN
Trigger: GTTGTGGGGCAGGTACAAGCAGCAACCAATATAGGA...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAGGAGTGGTGTCCAGATaGGTTTCTTCCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKGVVSR*VSSWGH
Trigger: GTGGCCCCAGGAAGAAACGCATCTGGACACCACTCC...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCATACTCGACCCGGCTaGATGGCTTGGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHHTRPG*MAWSGV
Trigger: GACACCACTCCAAGCCATGCAGCCGGGTCGAGTATG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGGAGCATGGAGAGACTaGACTCTCCGGATGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFGAWRD*TLRMVG
Trigger: CCCTACCATCCGGAGAGTGCAGTCTCTCCATGCTCC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CATTCTGCTCAAGCAGTACTTTGCCAACATCCTAAATGGGTGACTGACAGGGCTAGATTCTTGCCCGGATaGAGCATATTTTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSAQAVLCQHPKWVTDRARFLPG*SIFYSR
Trigger: TCTGGAGTAAAATATGCTGCATCCGGGCAAGAATCT...AGCCCTGTCAGTCACCCATTTAGGATGTTGGCAAAGTACTGCTTGAGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCACTGCTCTGGCGCTTaGCGTGTGGTTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHHCSGA*RVVGTG
Trigger: ACCAGTACCAACCACACGGCAAGCGCCAGAGCAGTG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGAACACAACAGGGAATaGAGACGCCTACCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTEHNRE*RRLPGN
Trigger: ATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTGTAATGAGCTTGCCGTaGTTTTTAGACACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSVMSLP*FLDTLV
Trigger: AACAAGAGTGTCTAAAAAGCACGGCAAGCTCATTAC...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392657.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGGACTGGGGAACTTTTTaGTTAATTAACTCAACACAG +
Preference number: 4 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMDWGTF*LINSTQ
Trigger: CTGTGTTGAGTTAATTAACCAAAAAGTTCCCCAGTC...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAGTTTTGGCACTGAGTTaGTCACTGACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTVLALS*SLTGEL
Trigger: AAGTTCCCCAGTCAGTGACCAACTCAGTGCCAAAAC...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATGCTGGATGACATCGTaGATTTTTATCAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSCWMTS*IFISLS
Trigger: AGAAAGGCTGATAAAAATCCACGATGTCATCCAGCA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAGATCAAAATCCAGGCTaGCTACTCCAATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTDQNPG*LLQCLV
Trigger: CACCAGACATTGGAGTAGCCAGCCTGGATTTTGATC...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCACACTTGGTTTATCCTTaGAGTATCCTGGTGAATCTA +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEAHLVYP*SILVNL
Trigger: TAGATTCACCAGGATACTCCAAGGATAAACCAAGTG...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGCTTTTTATTGGCACTTaGTTTATCCTTGGAGTATCC +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQLFIGT*FILGVS
Trigger: GGATACTCCAAGGATAAACCAAGTGCCAATAAAAAG...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCCTGCATCCTTTTTATTaGCACTTGGTTTATCCTTGG +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFLHPFY*HLVYPW
Trigger: CCAAGGATAAACCAAGTGCCAATAAAAAGGATGCAG...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGGTCCAGGGTAAAGAATaGACTCAGTTTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMVQGKE*TQFLLK
Trigger: CTTCAGGAGAAACTGAGTCCATTCTTTACCCTGGAC...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCATTCATCTTTACTATCTaGGTGGGGGATCTATTTGTG +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSFIFTI*VGDLFV
Trigger: CACAAATAGATCCCCCACCCAGATAGTAAAGATGAA...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGATTCATATGCTTCTTaGGCAACTGTCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQDSYAS*ATVSFV
Trigger: AACAAATGAGACAGTTGCCCAAGAAGCATATGAATC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGTGGAACTGCTCTGCTaGTCGATCGGTTTGGAAATA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTVELLC*SIGLEI
Trigger: TATTTCCAAACCGATCGACCAGCAGAGCAGTTCCAC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTGCTCTGCAGATCTCTaGGAAGGCGGAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFCSADL*EGGGGR
Trigger: CCTTCCCCCTCCGCCTTCCCAGAGATCTGCAGAGCA...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAACGGTACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLTVLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTACCGT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACACTTCTGTCCGTGAAATaGGAACAGAGCGAATCATGG +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTLLSVK*EQSESW
Trigger: CCATGATTCGCTCTGTTCCCATTTCACGGACAGAAG...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTCTGGCGCTTGCCGTGTaGTTGGTACTGGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFLALAV*LVLVQH
Trigger: GTGCTGTACCAGTACCAACCACACGGCAAGCGCCAG...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAGGGCTCATTCTGCATaGATCTGTGTTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKRAHSA*ICVSGC
Trigger: GCATCCTGAAACACAGATCCATGCAGAATGAGCCCT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAACAGCACATCAACGTaGTTCAGGATGAACTCAACA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSNSTST*FRMNST
Trigger: TGTTGAGTTCATCCTGAATCACGTTGATGTGCTGTT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAATCACAATTGGAGAATTaGCCTGAGCTTGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQSQLEN*PELVFV
Trigger: CACGAACACAAGCTCAGGTCAATTCTCCAATTGTGA...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAAATGATTTCCCCAAGTTaGAAAAGGAACGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQMISPS*KRNASY
Trigger: GTAGCTGGCGTTCCTTTTTCAACTTGGGGAAATCAT...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGCTCCTCACTTTTAGCTaGACGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPLLTFS*TEGSFC
Trigger: GCAGAAGGAACCCTCCGTTCAGCTAAAAGTGAGGAG...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAACTGAGCTGTGGTATTTaGGACTGTACCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQLSCGI*DCTNDF
Trigger: GAAGTCATTGGTACAGTCTCAAATACCACAGCTCAG...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTTACTCTGACTGCTTaGGACAGACTGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLTLTA*DRLILF
Trigger: AAAGAGGATCAGTCTGTCTCAAGCAGTCAGAGTAAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAAGTTAAGTCTACTTGGTaGTGTTGCTCCCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQVKSTW*CCSPDS
Trigger: TGAATCTGGGGAGCAACATCACCAAGTAGACTTAAC...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAAGGGGGTGGGACGATTaGCTGAGTGAGGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKRGWDD*LSEVFF
Trigger: GAAGAACACCTCACTCAGTCAATCGTCCCACCCCCT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCATTCTGTCATGATATaGGCCTGTTCACTGAACCGT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTHSVMI*ACSLNR
Trigger: ACGGTTCAGTGAACAGGCTCATATCATGACAGAATG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAACTCTAGATTTGATCTaGAGTTTGTGTTTCACGCTT +
Preference number: 4 (lower is better)
Translates to: SDNSVSICASCAATEGEATLDLI*SLCFTL
Trigger: AAGCGTGAAACACAAACTTCAGATCAAATCTAGAGT...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGTGTCATCCCCTAAAGTaGTACTCTCACTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMCHPLK*YSHFQS
Trigger: AGACTGAAAGTGAGAGTAGCACTTTAGGGGATGACA...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTATATCTCTCAATGAATaGTGTGCAGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCAISLNE*CAALKN
Trigger: GTTCTTCAAAGCTGCACAGCATTCATTGAGAGATAT...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTTCACTCTCATTCCGCTaGAGCTTTCGTTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSSLSFR*SFRLET
Trigger: TGTTTCTAAACGAAAGCTGCAGCGGAATGAGAGTGA...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGCTACTACCTGTTTCTaGATCCTTTTTATTGGCACT +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKATTCF*ILFIGT
Trigger: AGTGCCAATAAAAAGGATGCAGAAACAGGTAGTAGC...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGGCTTGCTTCTTGGTGTaGCCTGTGCTCAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPACFLV*PVLRKT
Trigger: AGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGC...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAGATTCTTGCCCGGATaGAGCATATTTTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSRFLPG*SIFYSR
Trigger: TCTGGAGTAAAATATGCTGCATCCGGGCAAGAATCT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAGAAATCGATGTGAACTaGTCTCAATTATGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EHNRECRRLPGNRCELLSEIDVN*SQLCSK
Trigger: TTTGCTGCATAATTGAGAGCAGTTCACATCGATTTC...TGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGACACTGACATTATCTTaGACACGTTATAATACACCA +
Preference number: 4 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQTLTLS*TRYNTP
Trigger: TGGTGTATTATAACGTGTGCAAGATAATGTCAGTGT...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGATTTTCCGTCACAATTaGAGAATTGACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKIFRHN*RIDLSL
Trigger: CAAGCTCAGGTCAATTCTCCAATTGTGACGGAAAAT...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTCTTTTTATTGGCACTTaGTTTATCCTTGGAGTATCC +
Preference number: 4 (lower is better)
Translates to: TPFVKSPICEVTHKVDCALFIGT*FILGVS
Trigger: GGATACTCCAAGGATAAACCAAGTGCCAATAAAAAG...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTTCTTTACTATCTGGGTaGGGGATCTATTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSSLLSG*GIYLWH
Trigger: ATGCCACAAATAGATCCCCCACCCAGATAGTAAAGA...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GAGAATGAAGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGTTCATCTTTACTATCTaGGTGGGGGATCTATTTGTG +
Preference number: 4 (lower is better)
Translates to: ENEVTTVCRSAQVVQLLKFIFTI*VGDLFV
Trigger: CACAAATAGATCCCCCACCCAGATAGTAAAGATGAA...CTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACTTCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAATGGTCACAGTTTCCTaGTGCATTATTCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTMVTVS*CIILEV
Trigger: CACCTCCAGAATAATGCACCAGGAAACTGTGACCAT...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTCATGGTGGCTGTGCTaGTATTCTCTTCGGGGGACC +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFSWWLC*YSLRGT
Trigger: GGTCCCCCGAAGAGAATACCAGCACAGCCACCATGA...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGGATAATTTGAACTGCTaGTGGCATCTGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRDNLNC*WHLHCW
Trigger: CCAGCAGTGCAGATGCCACCAGCAGTTCAAATTATC...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTGGCACCATACACTTaGTGCTGCTCCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLAPYT*CCSNLL
Trigger: CAATAAATTGGAGCAGCACCAAGTGTATGGTGCCAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATCTTGGGCAGTAGGCTaGCTCATCATCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKSWAVG*LIIWGN
Trigger: GTTCCCCCAGATGATGAGCCAGCCTACTGCCCAAGA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGAGAAGAACTGGAATATaGGCTATACCTGTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMRRTGI*AIPVVD
Trigger: GTCCACTACAGGTATAGCCCATATTCCAGTTCTTCT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAGTTGGCCCGGGGACGTaGAGCCAAACCAGCATAACT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAVGPGT*SQTSIT
Trigger: AGTTATGCTGGTTTGGCTCCACGTCCCCGGGCCAAC...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAATGGCCTTGGCTGCATaGCGGCTCTCCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKMALAA*RLSFPS
Trigger: AGAAGGAAAGGAGAGCCGCCATGCAGCCAAGGCCAT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACATGTCTGGAATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTCLESL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATTCCAGACA...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GAGACTGGTCCTGATCCAAGAAGGAGACAGTTGGCATACTGTTCTTCCCAGACTAGCCTTACCTCTTTGTaGTTCAGTCTTAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: ETGPDPRRRQLAYCSSQTSLTSL*FSLKDS
Trigger: AGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCT...AGTCTGGGAAGAACAGTATGCCAACTGTCTCCTTCTTGGATCAGGACCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTACTGGTACAGCACACTaGGGTCCCTCTCCACGTTCT +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFTGTAH*GPSPRS
Trigger: AGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTACAGTCACACTGCTCTaGCGCTTGCCGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFTVTLL*RLPCGW
Trigger: CCAACCACACGGCAAGCGCCAGAGCAGTGTGACTGT...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAGGGACCTCGTACTCTaGTTTAGGAACAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSRDLVL*FRNRNK
Trigger: TTTGTTTCTGTTCCTAAACCAGAGTACGAGGTCCCT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGACCTTTTCACATATaGGTGTTTCAAGGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFRPFHI*VFQGFY
Trigger: GTAGAAACCTTGAAACACCCATATGTGAAAAGGTCT...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGCCGTGTGTATCTCCTaGTCACAGCAGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFAVCIS*SQQPLF
Trigger: GAAGAGGGGCTGCTGTGACCAGGAGATACACACGGC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CAA 72 bp CTGCAAATTCTAAAGGGTGATGGAGTTTATCCACACTaGCACCAAGATAAGAAGGAGGCTGATCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LQILKGDGVYPH*HQDKKEADLHC
Trigger: ACAGTGGAGATCAGCCTCCTTCTTATCTTGGTGCAAGTGTGGATAAACTCCATCACCCTTTAGAATTTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp TTCTTACCTTGTGGGAATTATTTAATCCTATATTGGTaGCTGCTTGTACCTGCCCCACAACTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLPCGNYLILYW*LLVPAPQLVAA
Trigger: AGCAGCCACCAGTTGTGGGGCAGGTACAAGCAGCAACCAATATAGGATTAAATAATTCCCACAAGGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
3UTR CAA 72 bp TGGAGCCAAACCAGCATAACTGTACAAGCTCTTTCCTaGCAGCCTAGGATTGTAGAAAGCAAAGTCTCGATT +
Preference number: 4 (lower is better)
Translates to: WSQTSITVQALS*QPRIVESKVSI
Trigger: AATCGAGACTTTGCTTTCTACAATCCTAGGCTGCAAGGAAAGAGCTTGTACAGTTATGCTGGTTTGGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACTCCTCACTTTTAGCTaGACGGAGGGTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKLLTFS*TEGSFC
Trigger: GCAGAAGGAACCCTCCGTTCAGCTAAAAGTGAGGAG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTATAAGGGCTGGGATATaGAGCAGCCCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFIRAGI*SSPPSS
Trigger: GGAGGAAGGAGGGCTGCTTCATATCCCAGCCCTTAT...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGGAAGATGATGCATTCTaGGCTGTGGTATTTGAGACT +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKEDDAF*AVVFET
Trigger: AGTCTCAAATACCACAGCTCAGAATGCATCATCTTC...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTTGTATACCCAGCCTaGGAGGTCCCTGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFFVYPA*EVPGLF
Trigger: GAAGAGACCAGGGACCTCTCAGGCTGGGTATACAAA...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGGAAGTCCCCCATTTGTaGAGTCACACACAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPEVPHL*SHTQGG
Trigger: TCCACCTTGTGTGTGACTTCACAAATGGGGGACTTC...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGACTTTTGTGAAGATTTaGAGCAGGACCATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRTFVKI*SRTIGP
Trigger: AGGGCCAATGGTCCTGCTTCAAATCTTCACAAAAGT...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGACTTCAGATTCATATaGTTCTTGGGCAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTDFRFI*FLGNCL
Trigger: GAGACAGTTGCCCAAGAAGCATATGAATCTGAAGTC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGAGGTGGAACTGCTCTaGTGGTCGATCGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKEVELL*WSIGLE
Trigger: TTCCAAACCGATCGACCAGCAGAGCAGTTCCACCTC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGAGGTGGAACTGCTCTaGTGGTCGATCGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFEVELL*WSIGLE
Trigger: TTCCAAACCGATCGACCAGCAGAGCAGTTCCACCTC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTGCTCATTTGGGCTGTTaGTGGAGTAGTTGTCATGTA +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTAHLGC*WSSCHV
Trigger: TACATGACAACTACTCCAGCAACAGCCCAAATGAGC...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAAGCTGGCTTCCTTGGTaGTCATTTGGGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKSWLPW*SFGLLL
Trigger: CAGCAACAGCCCAAATGAGCACCAAGGAAGCCAGCT...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAGCTTGCTTCTTGGTGTaGCCTGTGCTCAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKACFLV*PVLRKT
Trigger: AGTCTTCCTGAGCACAGGGCACACCAAGAAGCAAGC...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAGAACTGCCTATGGCTTaGTTCTTGGTGTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKELPMA*FLVCPV
Trigger: CACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTC...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGTTTGACTCACAGAACTaGCTATGGCTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRFDSQN*LWLASW
Trigger: CCAAGAAGCAAGCCATAGGCAGTTCTGTGAGTCAAA...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTACACAACAGTCACACTaGTCTGGCGCTTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFTQQSH*SGACRV
Trigger: CACACGGCAAGCGCCAGAGCAGTGTGACTGTTGTGT...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKLSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCTGTCCAGCAGAGGCTaGTTCAACTCTATTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHLSSRG*FNSIAR
Trigger: GCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTCTGTTCTTCCCAGACTaGTCTTCAGGGAAACTTACA +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTLFFPD*SSGKLT
Trigger: TGTAAGTTTCCCTGAAGACCAGTCTGGGAAGAACAG...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGACTGTAGAAACGGGGTaGAGACTGGTCCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPTVETG*RLVLIQ
Trigger: TTGGATCAGGACCAGTCTCCACCCCGTTTCTACAGT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCATACCTGCCCCACAACTaGTGGCTGCTCTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAYLPHN*WLLCRS
Trigger: AGATCTGCAGAGCAGCCACCAGTTGTGGGGCAGGTA...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTCACTGCTGGAGTGTATaGCAGCAATCATCTTACTCT +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTHCWSV*QQSSYS
Trigger: AGAGTAAGATGATTGCTGCCATACACTCCAGCAGTG...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCAGATGCGTTTCTTCCTaGGGCCACATATGTGTTATA +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTRCVSS*GHICVI
Trigger: TATAACACATATGTGGCCCCAGGAAGAAACGCATCT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTCTGGGAGGACTGATATaGCTTATATTGGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTLGGLI*LILVQR
Trigger: CCTCTGTACCAATATAAGCCATATCAGTCCTCCCAG...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAAAGAAGAACTGGAATATaGGCTATACCTGTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQRRTGI*AIPVVD
Trigger: GTCCACTACAGGTATAGCCCATATTCCAGTTCTTCT...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAACTACATTATGGTCGTTaGGAGAGAAATAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQLHYGR*ERNSQS
Trigger: TGACTGGCTATTTCTCTCCCAACGACCATAATGTAG...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACCTTGTAGCAGTCTCTaGAGTGTTTCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKPCSSL*SVSLGQ
Trigger: CTGCCCCAGAGAAACACTCCAGAGACTGCTACAAGG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTACTGGTACAGCACACTaGGGTCCCTCTCCACGTTCT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFTGTAH*GPSPRS
Trigger: AGAACGTGGAGAGGGACCCCAGTGTGCTGTACCAGT...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTTCCAGGTTATCATACTaGGACACAACAGTCACACTG +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTSRLSY*DTTVTL
Trigger: CAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGA...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTCAACCATCCAGTAATTaGAATGCAATTCTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSQPSSN*NAILLV
Trigger: CACTAGGAGAATTGCATTCCAATTACTGGATGGTTG...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACTGGACCGGACTCCCTaGGTTACTTTCTTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKLDRTP*VTFFRL
Trigger: GAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTTCAACAACCACAGACTaGATCCTCACTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTSTTTD*ILTSMK
Trigger: TTTCATGGAAGTGAGGATTCAGTCTGTGGTTGTTGA...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACATGGCTTTCATCTCTaGAGGCTCACTCTCATTCCG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKHGFHL*RLTLIP
Trigger: CGGAATGAGAGTGAGCCTTCAGAGATGAAAGCCATG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCGCAAATTCTAAAGGGTaGTGGAGTTTATCCACACTT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTANSKG*WSLSTL
Trigger: AAGTGTGGATAAACTCCATCACCCTTTAGAATTTGC...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATAAGGCTGAAGCTGAGTaGCATGATAATCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHKAEAE*HDNLSG
Trigger: CCCGCTCAGATTATCATGTCACTCAGCTTCAGCCTT...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTATTACAAGAAGACTGTaGCCACACAAGTATAGAGTA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSITRRL*PHKYRV
Trigger: TACTCTATACTTGTGTGGTCACAGTCTTCTTGTAAT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCATGCAGGTCATGGTTaGAAAATCAGGTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTHAGHG*KIRFCY
Trigger: ATAGCAAAACCTGATTTTTCAACCATGACCTGCATG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAACACTTCCATGAAAGCTaGTGTTCCACTGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKHFHES*CSTEAG
Trigger: GCCTGCTTCAGTGGAACAGCAGCTTTCATGGAAGTG...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTTCACTCTCATTCCGCTaGAGCTTTCGTTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTSLSFR*SFRLET
Trigger: TGTTTCTAAACGAAAGCTGCAGCGGAATGAGAGTGA...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGACAGGTTCAGAGCTTaGTGTGCTTCCTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFDRFRA*CASWSL
Trigger: CAGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTTTCTGGAGGTGGAACTaGTCTGCTGGTCGATCGGTT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFFWRWN*SAGRSV
Trigger: AACCGATCGACCAGCAGAGCAGTTCCACCTCCAGAA...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATGTCTCAACTGGACTGTaGCATAGGCATCCACATCAC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHVSTGL*HRHPHH
Trigger: GTGATGTGGATGCCTATGGCACAGTCCAGTTGAGAC...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTTGTGCTCAGGAAGACTaGAGCCCATGTCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFCAQED*SPCQEA
Trigger: AGCTTCCTGACATGGGCTGCAGTCTTCCTGAGCACA...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp AACAGGGAATGCAGACGCCTACCAGGAAATCGATGTGAACTGCTCTCAATTATGAGTCTTAAAGATTCTTaGCCGGATGCAGCATATTTT +
Preference number: 4 (lower is better)
Translates to: NRECRRLPGNRCELLSIMSLKDS*PDAAYF
Trigger: AAAATATGCTGCATCCGGGCAAGAATCTTTAAGACT...CATAATTGAGAGCAGTTCACATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTGTTTGCATCTATTACTaGTCCAAATGTGGTAACCTA +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSVCIYY*SKCGNL
Trigger: TAGGTTACCACATTTGGAGCAGTAATAGATGCAAAC...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp GATCGGTTTGGAAATAGGCCTTATCTAGAGCAACTGCAGAGTAAGAACTGGACAGAGTTGGTCACTGACTaGGGAACTTTTTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: DRFGNRPYLEQLQSKNWTELVTD*GTFWLI
Trigger: AATTAACCAAAAAGTTCCCCAGTCAGTGACCAACTC...TGTCCAGTTCTTACTCTGCAGTTGCTCTAGATAAGGCCTATTTCCAAACCGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAATACCAGGAGGGACTTaGGCCTTGATAGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKIPGGT*ALIEKL
Trigger: CAGCTTCTCTATCAAGGCCCAAGTCCCTCCTGGTAT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACAGACAGTGCATCACTaGAAGATCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKQTVHH*KIWVFW
Trigger: CCAGAAGACCCAGATCTTCCAGTGATGCACTGTCTG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAAGGAGACATAAGGGCTaGGATATGAAGCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEARRHKG*DMKQPS
Trigger: GGAGGGCTGCTTCATATCCCAGCCCTTATGTCTCCT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGGCTACTCCAATGTCTaGTGGGCTCAAGTCAACATC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKGYSNV*WAQVNI
Trigger: GATGTTGACTTGAGCCCACCAGACATTGGAGTAGCC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTGCATCCTTTTTATTaGCACTTGGTTTATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLHPFY*HLVYPW
Trigger: CCAAGGATAAACCAAGTGCCAATAAAAAGGATGCAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAATTTTTCGGAGGCGGTaGTGGTGGGATAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKIFRRR*WWDKRD
Trigger: GTCTCTCTTATCCCACCACCACCGCCTCCGAAAAAT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGTCCTTGGTGCTCATTTaGGCTGTTGCTGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPSLVLI*AVAGVV
Trigger: AACTACTCCAGCAACAGCCCAAATGAGCACCAAGGA...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATCTGCATGGCTTGGAGTaGTGTCCAGATGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHLHGLE*CPDAFL
Trigger: AAGAAACGCATCTGGACACCACTCCAAGCCATGCAG...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp AACACAAGATCCTTCTCAGACGGGGAGAATGAAGTGACAACAGTGTGTCGATCTAGCCTTACCTCTTTGTaGTTCAGTCTTAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: NTRSFSDGENEVTTVCRSSLTSL*FSLKDS
Trigger: AGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCT...AGATCGACACACTGTTGTCACTTCATTCTCCCCGTCTGAGAAGGATCTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGCTATGACTCCTCTCTaGTTTAGGGGGTGGGACGAT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFAMTPL*FRGWDD
Trigger: ATCGTCCCACCCCCTAAACCAGAGAGGAGTCATAGC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCCTCTCATGCAGGTCATaGTTGAAAAATCAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTLSCRS*LKNQVL
Trigger: CAAAACCTGATTTTTCAACCATGACCTGCATGAGAG...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATGACCATTGGCCCTTTTaGGGAGTTTTGTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHDHWPF*GVLLDC
Trigger: GCAGTCCAACAAAACTCCCCAAAAGGGCCAATGGTC...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTAAGCTATAGTCATCTAGGAGCTACTCCTTTCCTGGGGAAAAGCCAGCATCAATTACGTTATCCTAAATaGAAAGCCAAACACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSYSHLGATPFLGKSQHQLRYPK*KAKHSP
Trigger: TGGGGAGTGTTTGGCTTTCCATTTAGGATAACGTAA...TTGATGCTGGCTTTTCCCCAGGAAAGGAGTAGCTCCTAGATGACTATAGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAACTCTCCAGACATTCTaGTTCGGCCTTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEATLQTF*FGLRRT
Trigger: AGTCCTCCTAAGGCCGAATCAGAATGTCTGGAGAGT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGCTGAGCTGTGGTATTTaGGACTGTACCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPLSCGI*DCTNDF
Trigger: GAAGTCATTGGTACAGTCTCAAATACCACAGCTCAG...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATTGGGATAAGAGAGACTaGACTGACAGGAACGGAATC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHWDKRD*TDRNGI
Trigger: GATTCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATGCTCCAATTTATTGTaGTGGGGAGGTACACTCTGG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKCSNLL*WGGTLW
Trigger: CCAGAGTGTACCTCCCCATCACAATAAATTGGAGCA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATATTGAAACAGGCACCTaGCTATGGGACAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHIETGT*LWDKLL
Trigger: CAGCAGTTTGTCCCATAGTCAGGTGCCTGTTTCAAT...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTAATCTCTGGAACATCTaGGCCTCTTGCCATTGCGCT +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFNLWNI*ASCHCA
Trigger: AGCGCAATGGCAAGAGGCGCAGATGTTCCAGAGATT...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCAGTCTTAAAGATTCTTaGCCGGATGCAGCATATTTT +
Preference number: 4 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTSLKDS*PDAAYF
Trigger: AAAATATGCTGCATCCGGGCAAGAATCTTTAAGACT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTCGCAGGGCTCATTCTaGATGGATCTGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFSQGSF*MDLCFR
Trigger: CCTGAAACACAGATCCATGCAGAATGAGCCCTGCGA...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAAACAGTGTGTCGATCTaGGCAAGTTGTGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKNSVSI*ASCAAT
Trigger: AGTAGCTGCACAACTTGCGCAGATCGACACACTGTT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTACGCAGTTGTGCAAAAATTATCCACGAATTCTCACCGTCCAAAGAGATAAGGAAAGAAGGCTTGTGCTaGTATTTTGTACAACACCCA +
Preference number: 4 (lower is better)
Translates to: LRSCAKIIHEFSPSKEIRKEGLC*YFVQHP
Trigger: TGGGTGTTGTACAAAATAGCAGCACAAGCCTTCTTT...CCTTATCTCTTTGGACGGTGAGAATTCGTGGATAATTTTTGCACAACTGCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTGGGGGATCTATTTGTaGCATCCCTTTCTTCAACGC +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFWGIYL*HPFLQR
Trigger: GCGTTGAAGAAAGGGATGCCACAAATAGATCCCCCA...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGCTGATCCTCTTTCCCTaGCAATTCTACTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPLILFP*QFYFFS
Trigger: GCTGAAGAAGTAGAATTGCCAGGGAAAGAGGATCAG...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGCACTGCTGGAGTGTATaGCAGCAATCATCTTACTCT +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPHCWSV*QQSSYS
Trigger: AGAGTAAGATGATTGCTGCCATACACTCCAGCAGTG...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACTTCTGTCCGTGAAATaGGAACAGAGCGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKLLSVK*EQSESW
Trigger: CCATGATTCGCTCTGTTCCCATTTCACGGACAGAAG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAACACAGGGCCCCATCTaGACTGTAATAGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKTQGPI*TVIGTR
Trigger: TCTAGTTCCTATTACAGTCCAGATGGGGCCCTGTGT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGTGTCTGGAATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPCLESL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATTCCAGACA...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATGGCTCAGAAGTGTCTaGAATCCCTTTGGACCCATA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKWLRSV*NPFGPI
Trigger: TATGGGTCCAAAGGGATTCCAGACACTTCTGAGCCA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAGCCTTACCTCTTTGTaGTTCAGTCTTAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKSLTSL*FSLKDS
Trigger: AGAATCTTTAAGACTGAACCACAAAGAGGTAAGGCT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCACAAGCTAGCCCTAGATaGCAAGTGTGTCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAQASPR*QVCPET
Trigger: TGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTG...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAAAGCTGCTGTTCCACTaGAGCAGGCAGATTCTATCT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAKLLFH*SRQILS
Trigger: AGATAGAATCTGCCTGCTTCAGTGGAACAGCAGCTT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATCACAATTGGAGAATTaGCCTGAGCTTGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKSQLEN*PELVFV
Trigger: CACGAACACAAGCTCAGGTCAATTCTCCAATTGTGA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCATGGGATAAGAGAGACTaGACTGACAGGAACGGAATC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAWDKRD*TDRNGI
Trigger: GATTCCGTTCCTGTCAGTTCAGTCTCTCTTATCCCA...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGAAAGGAATGATAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPKGMII*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTATCATTCCTTT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTACTACGCAGATGGATaGCATAGATCCCACCCAAGT +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFYYADG*HRSHPS
Trigger: ACTTGGGTGGGATCTATGTCATCCATCTGCGTAGTA...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACATTCTGTCATGATATaGGCCTGTTCACTGAACCGT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKHSVMI*ACSLNR
Trigger: ACGGTTCAGTGAACAGGCTCATATCATGACAGAATG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCACAGTTACCCCATTTGTaGAGTCCCCCATTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAQLPHL*SPPFVK
Trigger: CTTCACAAATGGGGGACTTCACAAATGGGGTAACTG...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp ATATTAAAACTGGACCGGACTCCCTGGGTTACTTTCTTTAGGCTCTCAGTTACTATAATACACCATTCCTaGCATTTCTGTAACACACAG +
Preference number: 4 (lower is better)
Translates to: ILKLDRTPWVTFFRLSVTIIHHS*HFCNTQ
Trigger: CTGTGTGTTACAGAAATGTCAGGAATGGTGTATTAT...AGTAACTGAGAGCCTAAAGAAAGTAACCCAGGGAGTCCGGTCCAGTTTTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR GCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCATCCTATATTGGTTGCTaGTTGTACCTGCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEASYIGC*LYLPHN
Trigger: GTTGTGGGGCAGGTACAAGCAGCAACCAATATAGGA...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTATCTGTGTTTCAGGATaGTGCAAGGACAACTCTGCG +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFICVSG*CKDNSA
Trigger: CGCAGAGTTGTCCTTGCAGCATCCTGAAACACAGAT...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAAATTTGAACTGCTGGTaGCATCTGCACTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEANLNCW*HLHCWS
Trigger: ACTCCAGCAGTGCAGATGCCACCAGCAGTTCAAATT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAGTTGTGGTAGCTGACTaGCTCAGAAGTGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAVVVAD*LRSVWN
Trigger: ATTCCAGACACTTCTGAGCCAGTCAGCTACCACAAC...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTCCAGGTTATCATACTaGGACACAACAGTCACACTG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFSRLSY*DTTVTL
Trigger: CAGTGTGACTGTTGTGTCCCAGTATGATAACCTGGA...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGAACATAGAATGGAGTTaGGCTAGAGAGTTCCTACTC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPNIEWS*AREFLL
Trigger: GAGTAGGAACTCTCTAGCCCAACTCCATTCTATGTT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp TTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTTTTCTAAAGAATCAGACCAAACTGTaGAATCAGAATTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FSTGFQHGALPSFRSFLKNQTKL*NQNFAK
Trigger: TTTGGCAAAATTCTGATTCCACAGTTTGGTCTGATT...CTTTAGAAAAGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310343.13
3UTR CAA 72 bp AATAAGAAAAAGCAACCCACAACCGTAAAGCCCACTTaGTCTCATTTGATCCTGATCTCTTTGTGTTACTGG +
Preference number: 4 (lower is better)
Translates to: NKKKQPTTVKPT*SHLILISLCYW
Trigger: CCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTACGGTTGTGGGTTGCTTTTTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATGCCATATCTCTCAATaGATGCTGTGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKCHISQ*MLCSFE
Trigger: TTCAAAGCTGCACAGCATTCATTGAGAGATATGGCA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCACTGAGCTGTGGTATTTaGGACTGTACCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEALSCGI*DCTNDF
Trigger: GAAGTCATTGGTACAGTCTCAAATACCACAGCTCAG...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGAAGATGATGCATTCTaGGCTGTGGTATTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKEDDAF*AVVFET
Trigger: AGTCTCAAATACCACAGCTCAGAATGCATCATCTTC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGTTAAGTCTACTTGGTaGTGTTGCTCCCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFVKSTW*CCSPDS
Trigger: TGAATCTGGGGAGCAACATCACCAAGTAGACTTAAC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAAAAAGGAATGATAATTTaGACTGCTGGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKKGMII*TAGGIC
Trigger: GCAGATGCCACCAGCAGTTCAAATTATCATTCCTTT...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATATAAGGGGACTTTTGTaGAGATTTGAAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHIRGLL*RFEAGP
Trigger: TGGTCCTGCTTCAAATCTTCACAAAAGTCCCCTTAT...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTACTACATTCTCTCATTaGAACAGGCACCTGACTATG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFTTFSH*NRHLTM
Trigger: CATAGTCAGGTGCCTGTTTCAATGAGAGAATGTAGT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGAGAATCACCATCAACTaGATGGAGAGATGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPRITIN*MERCKR
Trigger: TCTCTTACATCTCTCCATGCAGTTGATGGTGATTCT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCATCACCATCAACTGCATaGAGAGATGTAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEASPSTA*RDVRDS
Trigger: GGAGTCTCTTACATCTCTCCATGCAGTTGATGGTGA...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATCATGTAAGTCATGGTaGCTGTGCTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKSCKSW*LCWYSL
Trigger: AAGAGAATACCAGCACAGCCACCATGACTTACATGA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp GTAAAGCCCACTTTGTCTCATTTGATCCTGATCTCTTTGTGTTACTGGAATAAATTGTCATGTAAGTCATaGTGGCTGTGCTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: VKPTLSHLILISLCYWNKLSCKS*WLCWYS
Trigger: AGAATACCAGCACAGCCACCATGACTTACATGACAA...TTTATTCCAGTAACACAAAGAGATCAGGATCAAATGAGACAAAGTGGGCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAGTCATGTTATCATATTaGGACATGACAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKVMLSY*DMTGPF
Trigger: GAAAGGGCCTGTCATGTCCCAATATGATAACATGAC...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCATGTCTGGAATCCCTTTaGACCCATAATCTAACTGGC +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEACLESL*THNLTG
Trigger: GCCAGTTAGATTATGGGTCCAAAGGGATTCCAGACA...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR TCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTCAAAATGGCAATCCATaGTCTTCTATCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFQNGNP*SSIPHA
Trigger: TGCATGTGGGATAGAAGATCATGGATTGCCATTTTG...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTATCTGGGGAGACTTTTaGAATTCACAGTTGTACACA +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFIWGDF*NSQLYT
Trigger: TGTGTACAACTGTGAATTTCAAAAGTCTCCCCAGAT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTGTGAAAGCTGTATGCTaGCGAACTCAACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFVKAVC*RTQHSH
Trigger: ATGAGAATGTTGAGTTCGGCAGCATACAGCTTTCAC...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATAAAGTGAAAGCTGTATaGTGCCGAACTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHKVKAV*CRTQHS
Trigger: AGAATGTTGAGTTCGGCAGCATACAGCTTTCACTTT...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp GTACTAACTTTTAAAAGTCCATTCTGTCATGATATGAGCCTGTTCACTGAACCGATATCTCTCAATGAATaGTGTGCAGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLTFKSPFCHDMSLFTEPISLNE*CAALKN
Trigger: GTTCTTCAAAGCTGCACAGCATTCATTGAGAGATAT...CGGTTCAGTGAACAGGCTCATATCATGACAGAATGGACTTTTAAAAGTTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTAGAATCACCATCAACTaGATGGAGAGATGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFRITIN*MERCKR
Trigger: TCTCTTACATCTCTCCATGCAGTTGATGGTGATTCT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTGCTACTACCTGTTTCTaGATCCTTTTTATTGGCACT +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFATTCF*ILFIGT
Trigger: AGTGCCAATAAAAAGGATGCAGAAACAGGTAGTAGC...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAACCTGAAGGCAGGCAATaGATTAAAAGCATCAATAGA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKPEGRQ*IKSINR
Trigger: TCTATTGATGCTTTTAATGCATTGCCTGCCTTCAGG...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAAGGATGCTTCTCTCATaGAGGTCATGGTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKRMLLS*RSWLKN
Trigger: ATTTTTCAACCATGACCTGCATGAGAGAAGCATCCT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp CCAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTATTTTCCGTCACAATTaGAGAATTGACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PKSLQGRQSYECFENEVFIFRHN*RIDLSL
Trigger: CAAGCTCAGGTCAATTCTCCAATTGTGACGGAAAAT...AAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAAACGGTACTGGCAGTTTaGAGTCATATTGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKTVLAV*SHIEMQ
Trigger: TTGCATTTCAATATGACTCCAAACTGCCAGTACCGT...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGTCATGTTATCATATTaGGACATGACAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFVMLSY*DMTGPF
Trigger: GAAAGGGCCTGTCATGTCCCAATATGATAACATGAC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAACTGGAACTACTCCTTaGACCTTGTGGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEATGTTP*TLWELF
Trigger: AAATAATTCCCACAAGGTTCAAGGAGTAGTTCCAGT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTTGCTGGATGACATCGTaGATTTTTATCAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFCWMTS*IFISLS
Trigger: AGAAAGGCTGATAAAAATCCACGATGTCATCCAGCA...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTCACTTGGTTTATCCTTaGAGTATCCTGGTGAATCTA +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFHLVYP*SILVNL
Trigger: TAGATTCACCAGGATACTCCAAGGATAAACCAAGTG...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAATGCATTCTGAGCTGTaGTATTTGAGACTGTACCAA +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAMHSEL*YLRLYQ
Trigger: TTGGTACAGTCTCAAATACCACAGCTCAGAATGCAT...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTTTCATCTTTACTATCTaGGTGGGGGATCTATTTGTG +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFFIFTI*VGDLFV
Trigger: CACAAATAGATCCCCCACCCAGATAGTAAAGATGAA...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CCA 90 bp TTAAAAATACATACCCGGTCTATTAGTCTAGCTCAGTCTCAACACAAAGGACATATCTCTTTGTGTTACTaGAATAAACTACCGAGACAC +
Preference number: 4 (lower is better)
Translates to: LKIHTRSISLAQSQHKGHISLCY*NKLPRH
Trigger: GTGTCTCGGTAGTTTATTCCAGTAACACAAAGAGAT...ATGTCCTTTGTGTTGAGACTGAGCTAGACTAATAGACCGGGTATGTATTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR TCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTAGGGACTTGCAGGTTTaGAACGAAATTGAATATAGT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFRDLQV*NEIEYS
Trigger: ACTATATTCAATTTCGTTTCAAACCTGCAAGTCCCT...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR TCA 90 bp CAAAAAGTCTGCAAGGCAGACAGTCTTACGAATGTTTTGAGAATGAAGTATTTTAACAGTTTTTACATTTaGTGGTGTAGCTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QKVCKADSLTNVLRMKYFNSFYI*WCSWLV
Trigger: AACAAGCCAGCTACACCATCAAATGTAAAAACTGTT...AAAATACTTCATTCTCAAAACATTCGTAAGACTGTCTGCCTTGCAGACTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR GCA 90 bp TTTCTAAAGACAAAAATGACAAAGTCTATAGATGGAAGAGGGGGTAATGAAGCAGAAATCGATGTGAACTaGTCTCAATTATGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLKTKMTKSIDGRGGNEAEIDVN*SQLCSK
Trigger: TTTGCTGCATAATTGAGAGCAGTTCACATCGATTTC...TGCTTCATTACCCCCTCTTCCATCTATAGACTTTGTCATTTTTGTCTTTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR GCA 90 bp CTGAAGGCAGGCAATGCATTAAAAGCATCAATAGAGATTTCTGGTGCTAATAAATACTACAGTTTTTACTaGATCCCTCCAATGAATTCT +
Preference number: 4 (lower is better)
Translates to: LKAGNALKASIEISGANKYYSFY*IPPMNS
Trigger: AGAATTCATTGGAGGGATGCAGTAAAAACTGTAGTA...TTTATTAGCACCAGAAATCTCTATTGATGCTTTTAATGCATTGCCTGCCTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CCA 90 bp AGACGTCCAGGGAATATTTATTTCAATCAGACCAAACTGTGGAATCAGAATTTTGATTCATATGCTTCTTaGGCAACTGTCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: RRPGNIYFNQTKLWNQNFDSYAS*ATVSFV
Trigger: AACAAATGAGACAGTTGCCCAAGAAGCATATGAATC...AAAATTCTGATTCCACAGTTTGGTCTGATTGAAATAAATATTCCCTGGACGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CAA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTAGAACTGCCTATGGCTaGCTTCTTGGTGTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFRTAYG*LLGVPC
Trigger: ACAGGGCACACCAAGAAGCAAGCCATAGGCAGTTCT...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTCCAATGTCAGCAGTTaGGTGGATGGAGAGGATACC +
Preference number: 5 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFSNVSS*VDGEDT
Trigger: GGTATCCTCTCCATCCACCAAACTGCTGACATTGGA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTTTTGAAGCAGGACCATaGGCCCTTTTGGGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFFEAGP*ALLGSF
Trigger: AAAACTCCCCAAAAGGGCCAATGGTCCTGCTTCAAA...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTGACTTTTGTGAAGATTaGAAGCAGGACCATTGGCCC +
Preference number: 5 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFDFCED*KQDHWP
Trigger: GGGCCAATGGTCCTGCTTCAAATCTTCACAAAAGTC...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACAGACTCGGCGCGCAGGTGCAGCAGCGGGACCCGGGCACCGTCCCGCACTTTAAGAACGTAATGAGCTaGCCGTGCTTTTTAGACACT +
Preference number: 5 (lower is better)
Translates to: DRLGAQVQQRDPGTVPHFKNVMS*PCFLDT
Trigger: AGTGTCTAAAAAGCACGGCAAGCTCATTACGTTCTT...AAAGTGCGGGACGGTGCCCGGGTCCCGCTGCTGCACCTGCGCGCCGAGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCACCTATGGCTTGCTTCTaGGTGTGCCCTGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPPMACF*VCPVLR
Trigger: CCTGAGCACAGGGCACACCAAGAAGCAAGCCATAGG...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGACCCGGCTGCATGGCTaGGAGTGGTGTCCAGATGCG +
Preference number: 5 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWTRLHG*EWCPDA
Trigger: CGCATCTGGACACCACTCCAAGCCATGCAGCCGGGT...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAGAATGCTGTGCAGCTTaGAAGAACCTGCGGCACTTC +
Preference number: 5 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPECCAA*KNLRHF
Trigger: GAAGTGCCGCAGGTTCTTCAAAGCTGCACAGCATTC...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCAAGACAGGTTCAGAGCTaGCTGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPRQVQS*LCFLES
Trigger: AGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTCT...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGTCGGGACTGATGGCCTaGGCTGCATGGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGSGLMA*AAWRLS
Trigger: GGAGAGCCGCCATGCAGCCAAGGCCATCAGTCCCGA...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CAA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCATCGGGACTGATGGCCTaGGCTGCATGGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SDNSVSICASCAATEGEASGLMA*AAWRLS
Trigger: GGAGAGCCGCCATGCAGCCAAGGCCATCAGTCCCGA...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp AAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCTCGGGACTGATGGCCTaGGCTGCATGGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KLALDGKCVLRQVSLLGFSGLMA*AAWRLS
Trigger: GGAGAGCCGCCATGCAGCCAAGGCCATCAGTCCCGA...GAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCAGAAGCTGCCCCCTCTaGCATGGCCATGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: GKGTISSVRALKCGSSKIRSCPL*HGHADS
Trigger: AGAATCAGCATGGCCATGCAAGAGGGGGCAGCTTCT...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTACTGGGTTTCAGGGAGGGACTTGGGCCTaGATAGAGAAGCTGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ASPRWQVCPETGFSTGFQGGTWA*IEKLPP
Trigger: AGGGGGCAGCTTCTCTATCAAGGCCCAAGTCCCTCC...CTGAAACCCAGTAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp GTAGAAAGCAAAGTCTCGATTGGGAAGGCGGTGAAGGGGTCTCAACTGGACTGTGGAGGGACTTGGGCCTaGATAGAGAAGCTGCCCCCT +
Preference number: 5 (lower is better)
Translates to: VESKVSIGKAVKGSQLDCGGTWA*IEKLPP
Trigger: AGGGGGCAGCTTCTCTATCAAGGCCCAAGTCCCTCC...ACAGTCCAGTTGAGACCCCTTCACCGCCTTCCCAATCGAGACTTTGCTTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GACCCATGGAGGCTGGTGGCTCTGACCTGGCACCATACACTTGGTGCTGCTCCACGCATTTGTCCCAGGTaGAAGATGATGCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: DPWRLVALTWHHTLGAAPRICPR*KMMHSE
Trigger: CTCAGAATGCATCATCTTCAACCTGGGACAAATGCG...TGGAGCAGCACCAAGTGTATGGTGCCAGGTCAGAGCCACCAGCCTCCATGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp TTGGAATGGGTAGGATCCCCAGTAGCTGTTGTCTCTGGTAGAGGATGGTCACAGACACTGCTCTGGCGCTaGCCGTGTGGTTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: LEWVGSPVAVVSGRGWSQTLLWR*PCGWYW
Trigger: CCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGT...CTGTGACCATCCTCTACCAGAGACAACAGCTACTGGGGATCCTACCCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGAAATTGAATCCGGCTCACAGTGATTaGCCATCCGGTTTCCACCCC +
Preference number: 5 (lower is better)
Translates to: GPSRGTIPGTCRFETKLNPAHSD*PSGFHP
Trigger: GGGGTGGAAACCGGATGGCAAATCACTGTGAGCCGG...ATTCAATTTCGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CAA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGGTTTTGGCACTGAGTaGGTCACTGACTGGGGAACT +
Preference number: 5 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWGFGTE*VTDWGT
Trigger: AGTTCCCCAGTCAGTGACCAACTCAGTGCCAAAACC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGGATACCAGGAGGGACTaGGGCCTTGATAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETDTRRD*GLDREA
Trigger: AGCTTCTCTATCAAGGCCCAAGTCCCTCCTGGTATC...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CAA 90 bp GGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGTGTCCTTCCTTGGTGCTCATTaGGGCTGTTGCTGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: GAQRRHILDPAAWLGVVSFLGAH*GCCWSS
Trigger: ACTACTCCAGCAACAGCCCAAATGAGCACCAAGGAA...GGACACCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGCGCTTGCCGTGTGGTaGGTACTGGTACAGCACACT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGALAVW*VLVQHT
Trigger: AGTGTGCTGTACCAGTACCAACCACACGGCAAGCGC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CAA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTACACTGCTCTGGCGCTaGCCGTGTGGTTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSTLLWR*PCGWYW
Trigger: CCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp GGCTCTTTCAAGCTAGCCCTAGATGGCAAGTGTGTCCTGAGACAGGTTTCTCTAACACTGCTCTGGCGCTaGCCGTGTGGTTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: GSFKLALDGKCVLRQVSLTLLWR*PCGWYW
Trigger: CCAGTACCAACCACACGGCAAGCGCCAGAGCAGTGT...TAGAGAAACCTGTCTCAGGACACACTTGCCATCTAGGGCTAGCTTGAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp AGTGACAACAGTGTGTCGATCTGCGCAAGTTGTGCAGCTACTGAAGGAGAAGCAGGGCAGGAAGGCCCCTaGACCCAACGCTGTAGCATA +
Preference number: 5 (lower is better)
Translates to: SDNSVSICASCAATEGEAGQEGP*TQRCSI
Trigger: TATGCTACAGCGTTGGGTCAAGGGGCCTTCCTGCCC...TGCTTCTCCTTCAGTAGCTGCACAACTTGCGCAGATCGACACACTGTTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCGCTGCTTCAACTCTATaGCTCGCAGGGCTCATTCTG +
Preference number: 5 (lower is better)
Translates to: GKGTISSVRALKCGSSKIAASTL*LAGLIL
Trigger: CAGAATGAGCCCTGCGAGCAATAGAGTTGAAGCAGC...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GGGAAGGGGACGATTAGTTCTGTGCGTGCGCTGAAGTGTGGCAGCAGCAAAATCCCACAGTTGATCTTGTaGCCAGCGATAGCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GKGTISSVRALKCGSSKIPQLIL*PAIAER
Trigger: CCTTTCAGCTATCGCTGGCAACAAGATCAACTGTGG...GATTTTGCTGCTGCCACACTTCAGCGCACGCACAGAACTAATCGTCCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp ACCCCATTTGTGAAGTCCCCCATTTGTGAAGTCACACACAAGGTGGACTGTGCTAGGGCGGGCCCACAGTaGATCTTGTTGCCAGCGATA +
Preference number: 5 (lower is better)
Translates to: TPFVKSPICEVTHKVDCARAGPQ*ILLPAI
Trigger: TATCGCTGGCAACAAGATCAACTGTGGGCCCGCCCT...AGCACAGTCCACCTTGTGTGTGACTTCACAAATGGGGGACTTCACAAATGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CAA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGAGAATTGACCTGAGCTaGTGTTCGTGCCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMRIDLS*CSCLGL
Trigger: GAGGCCCAGGCACGAACACAAGCTCAGGTCAATTCT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp CTCTGGCGCTTGCCGTGTGGTTGGTACTGGTACAGCACACTGGGGTCCCTCTCCAGATTCATATGCTTCTaGGGCAACTGTCTCATTTGT +
Preference number: 5 (lower is better)
Translates to: LWRLPCGWYWYSTLGSLSRFICF*GNCLIC
Trigger: ACAAATGAGACAGTTGCCCAAGAAGCATATGAATCT...GGAGAGGGACCCCAGTGTGCTGTACCAGTACCAACCACACGGCAAGCGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTATATATTGGTTGCTGCTaGTACCTGCCCCACAACTGG +
Preference number: 5 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVYIGCC*YLPHNW
Trigger: CCAGTTGTGGGGCAGGTACAAGCAGCAACCAATATA...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp GTAAGTCATGGTGGCTGTGCTGGTATTCTCTTCGGGGGACCCAGAAGGAGGGTATGGTTGGGTAGCAGCTaGAACTTTCCCAAGCCATGT +
Preference number: 5 (lower is better)
Translates to: VSHGGCAGILFGGPRRRVWLGSS*NFPKPC
Trigger: ACATGGCTTGGGAAAGTTCAAGCTGCTACCCAACCA...TACCCTCCTTCTGGGTCCCCCGAAGAGAATACCAGCACAGCCACCATGACTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS TCA 90 bp TCCCGGAAGTACAGCTTACATAGGGAACCCACAGAATGGATGTCCTaGACATACGGTTCTTTCGTCAGGTCGGGGACGTGCTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SRKYSLHREPTEWMS*TYGSFVRSGTCSES
Trigger: TGACTCTGAGCACGTCCCCGACCTGACGAAAGAACCGTATGTTCAGGACATCCATTCTGTGGGTTCCCTATGTAAGCTGTACTTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
ENST00000526162.5
ENST00000527272.1
ENST00000533509.1
ENST00000682385.1
CDS TCA 90 bp ACCATCAACTGCATGGAGAGATGTAAGAGACTCCTCACTTTTAGCTaGACGGAGGGTTCCTTCTGCCCTGCCACCTTTCAGAGCCATGGC +
Preference number: 5 (lower is better)
Translates to: TINCMERCKRLLTFS*TEGSFCPATFQSHG
Trigger: GCCATGGCTCTGAAAGGTGGCAGGGCAGAAGGAACCCTCCGTTCAGCTAAAAGTGAGGAGTCTCTTACATCTCTCCATGCAGTTGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
ENST00000526162.5
ENST00000527272.1
ENST00000682385.1
CDS-3UTR CAA 90 bp GAGACAGGTTTCTCTACTGGGTTTCAGCACGGGGCTTTACCATCCTTCAGATCTAGAAGCTGCCCCCTCTaGCATGGCCATGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: ETGFSTGFQHGALPSFRSRSCPL*HGHADS
Trigger: AGAATCAGCATGGCCATGCAAGAGGGGGCAGCTTCT...AGATCTGAAGGATGGTAAAGCCCCGTGCTGAAACCCAGTAGAGAAACCTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGGATACCAGGAGGGACTaGGGCCTTGATAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGDTRRD*GLDREA
Trigger: AGCTTCTCTATCAAGGCCCAAGTCCCTCCTGGTATC...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CAA 90 bp AATAGAACAGTCCACTGTCCAGCAGAGGCTGCTTCAACTCTATTGCTCGCAGGGAGACAGGTTCAGAGCTaGCTGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: NRTVHCPAEAASTLLLAGRQVQS*LCFLES
Trigger: AGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTCT...CCCTGCGAGCAATAGAGTTGAAGCAGCCTCTGCTGGACAGTGGACTGTTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310343.13
ENST00000392657.7
ENST00000524655.5
CDS-3UTR CAA 90 bp GAAGGAGAAGCAGGAACACAACAGGGAATGCAGACGCCTACCAGGAAATCGATGAGACAGGTTCAGAGCTaGCTGTGCTTCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: EGEAGTQQGMQTPTRKSMRQVQS*LCFLES
Trigger: AGACTCCAGGAAGCACAGCAAGCTCTGAACCTGTCT...CATCGATTTCCTGGTAGGCGTCTGCATTCCCTGTTGTGTTCCTGCTTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7
CDS-3UTR CAA 90 bp AAATGTGCAGGCCCTAGTCGTGGGACCATCCCAGGGACTTGCAGGTTTGAAACGCGCATTTGTCCCAGGTaGAAGATGATGCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: KCAGPSRGTIPGTCRFETRICPR*KMMHSE
Trigger: CTCAGAATGCATCATCTTCAACCTGGGACAAATGCG...CGTTTCAAACCTGCAAGTCCCTGGGATGGTCCCACGACTAGGGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310343.13
CDS-3UTR CAA 90 bp ACAGAGGAGCTCAAAGAAGACACATACTCGACCCGGCTGCATGGCTTGGAGTGGGGAGGTGTGGGAGATTaGTCTGCAAATTCTAAAGGG +
Preference number: 5 (lower is better)
Translates to: TEELKEDTYSTRLHGLEWGGVGD*SANSKG
Trigger: CCCTTTAGAATTTGCAGACAAATCTCCCACACCTCC...CCACTCCAAGCCATGCAGCCGGGTCGAGTATGTGTCTTCTTTGAGCTCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524655.5
CDS-3UTR CAA 90 bp AGAGTATGGTTCAGCCTGAGTCTAAGTGGTCTGGTGTTTTATGATGACTCTACCACCCGGCTGCATGGCTaGGAGTGGTGTCCAGATGCG +
Preference number: 5 (lower is better)
Translates to: RVWFSLSLSGLVFYDDSTTRLHG*EWCPDA
Trigger: CGCATCTGGACACCACTCCAAGCCATGCAGCCGGGT...GGTAGAGTCATCATAAAACACCAGACCACTTAGACTCAGGCTGAACCATACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310343.13
ENST00000392657.7