RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP29 (Homo sapiens)

Ensembl gene IDs: ENSG00000137962

Ensembl transcript IDs: ENST00000260526.11, ENST00000370217.3, ENST00000482481.1, ENST00000546444.1, ENST00000552844.5

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGCTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATaGTCCAGGCTCCAGGCTGGGGAGGATGTTAGGGATTGGTGTGGT +
Preference number: 1 (lower is better)
Translates to: VCSGLTSLGSKIQLP*SRLQAGEDVRDWCG
Trigger: ACCACACCAATCCCTAACATCCTCCCCAGCCTGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CCA 90 bp GACAATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTaGTGTTCTGGCAGCACTAACAGGGCTCCTGCTGTTGCCCTTTCC +
Preference number: 1 (lower is better)
Translates to: DNTHHLGQYASHKAS*CSGSTNRAPAVALS
Trigger: GGAAAGGGCAACAGCAGGAGCCCTGTTAGTGCTGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 90 bp TGCTCATTATCAAAAGGTTGTGAATTTGTCTCTCTTCCAGCCAGATaGCAGGAGCCTAGGATTCCAATGGTGTGCTCAGGACTGACATCA +
Preference number: 1 (lower is better)
Translates to: CSLSKGCEFVSLPAR*QEPRIPMVCSGLTS
Trigger: TGATGTCAGTCCTGAGCACACCATTGGAATCCTAGGCTCCTGTCATCTGGCTGGAAGAGAGACAAATTCACAACCTTTTGATAATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 90 bp CACTATGTGGTCCTGGATTGGGATGCTGAAACACAGGAACATTACTaGGGCAATCAAAATCAGCAGATTGAATGTGGTCTATGGATTAGA +
Preference number: 1 (lower is better)
Translates to: HYVVLDWDAETQEHY*GNQNQQIECGLWIR
Trigger: TCTAATCCATAGACCACATTCAATCTGCTGATTTTGATTGCCTCAGTAATGTTCCTGTGTTTCAGCATCCCAATCCAGGACCACATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 90 bp GGGAATAGTGTAGCCATAGTACCATCTTTAAATCACCCAAATAACTaGGGTACAATTCTATCTGCTTGTGAGTTCACTAGGCAACAAGTC +
Preference number: 1 (lower is better)
Translates to: GNSVAIVPSLNHPNN*GTILSACEFTRQQV
Trigger: GACTTGTTGCCTAGTGAACTCACAAGCAGATAGAATTGTACCTCAGTTATTTGGGTGATTTAAAGATGGTACTATGGCTACACTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 90 bp TGTGTAGACACACGTTTTCCTTTGAGCTGTTCACCAATAAGACAGTaGGCCTTTCTCAGGTCTTCATTTCCATATACCATTTCCCATTTA +
Preference number: 1 (lower is better)
Translates to: CVDTRFPLSCSPIRQ*AFLRSSFPYTISHL
Trigger: TAAATGGGAAATGGTATATGGAAATGAAGACCTGAGAAAGGCTCACTGTCTTATTGGTGAACAGCTCAAAGGAAAACGTGTGTCTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACTACGCTGGACAAAGTaGCAGGGAGCCCTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPLRWTK*QGALKA
Trigger: TGCCTTTAGGGCTCCCTGGCACTTTGTCCAGCGTAG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGCCTTGGCAAAGTTCCTaGCACACAGAGAAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRPWQSS*HTEKAQ
Trigger: TTGAGCCTTCTCTGTGTGCCAGGAACTTTGCCAAGG...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACTTAAGGCTCTACGCTaGACAAAGTGCCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPLKALR*TKCQGA
Trigger: GGCTCCCTGGCACTTTGTCCAGCGTAGAGCCTTAAG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTCACCAATAAGACAGTaGGCCTTTCTCAGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRSPIRQ*AFLRSS
Trigger: TGAAGACCTGAGAAAGGCTCACTGTCTTATTGGTGA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCACAGGGCTCCTGCTGTTaGCCTTTCCTTTTGGTCACG +
Preference number: 2 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAQGSCC*PFLLVT
Trigger: CGTGACCAAAAGGAAAGGGCAACAGCAGGAGCCCTG...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGCAATACGCATCATCTTaGACAATACGCCTCCCACAA +
Preference number: 2 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRQYASS*TIRLPQ
Trigger: TTGTGGGAGGCGTATTGTCCAAGATGATGCGTATTG...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGGTAGGTGACTATTCTTaGATGTGTGTAGACACACGT +
Preference number: 2 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRVGDYS*MCVDTR
Trigger: ACGTGTGTCTACACACATTCAAGAATAGTCACCTAC...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAAAAGGGCTGGTTATTaGTCCCTAGACCTTTACATC +
Preference number: 2 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRKRAGY*SLDLYI
Trigger: GATGTAAAGGTCTAGGGAGCAATAACCAGCCCTTTT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATTCTCAAGAGATACTTaGCTCAGGGCCCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAFSRDT*LRAPGN
Trigger: GTTTCCTGGGGCCCTGAGGCAAGTATCTCTTGAGAA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAAGAAATGACTTCTTCTaGGTCGTTTGGACAATACGC +
Preference number: 2 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPRNDFF*VVWTIR
Trigger: GCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAAAAAGGCAAAACCCATaGTTTGGCAGTCCTATACAA +
Preference number: 2 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPKRQNP*FGSPIQ
Trigger: TTGTATAGGACTGCCAAATCATGGGTTTTGCCTTTT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAAGGGATGCATTCAAATaGACCATTTGGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: IRIILDNTPPTRLPGVLARDAFK*TIWWGK
Trigger: CTTTCCCCACCAAATGGTCCATTTGAATGCATCCCT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAACATTGTGTGCATCCTaGCATGACACATTTGAGTAT +
Preference number: 2 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPTLCAS*HDTFEY
Trigger: ATACTCAAATGTGTCATGCCAGGATGCACACAATGT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp TTCTTTCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGGCAGACGCAGAACTTTaGCACCAAACTCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FFHKLQNSGLSIVVLKMWADAEL*HQTPGR
Trigger: TCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGC...CCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR-3UTR CCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGTCACCTGTGGCTTCTaGCAGCTGTATCGGACAGCT +
Preference number: 2 (lower is better)
Translates to: WCLRFSLYVCLLSIELELVTCGF*QLYRTA
Trigger: AGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGAC...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR-3UTR CCA 90 bp TTCTTTCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGCTGAATGAGAAACTCTaGGGGATGGGCTTAGCCATG +
Preference number: 2 (lower is better)
Translates to: FFHKLQNSGLSIVVLKMWLNEKL*GMGLAM
Trigger: CATGGCTAAGCCCATCCCCCAGAGTTTCTCATTCAG...CCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR CAA 90 bp ACAGTCATTAAGAGCACTAACCATCAAAATCTGACAGCCCTATGTTaGAGATTTGACTCCACCTGTTACACCTGTGGAACACTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: TVIKSTNHQNLTALC*RFDSTCYTCGTLKQ
Trigger: TTGCTTCAGTGTTCCACAGGTGTAACAGGTGGAGTCAAATCTCAAACATAGGGCTGTCAGATTTTGATGGTTAGTGCTCTTAATGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CAA 90 bp AGGCTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTaGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCA +
Preference number: 2 (lower is better)
Translates to: RLKTWCLRFSLYVCL*SIELELGQLPKWVS
Trigger: TGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAATAATGAGGCTTACTaGCCTGTACTCTCAGAATCA +
Preference number: 2 (lower is better)
Translates to: NKRGKSNEASLRNTEASLNNEAY*PVLSES
Trigger: TGATTCTGAGAGTACAGGTCAGTAAGCCTCATTATT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTCTCTTCCAGCCAGATaGCAGGAGCCTAGGATTCCA +
Preference number: 2 (lower is better)
Translates to: YFLNCMLILWMQSRLVECSLPAR*QEPRIP
Trigger: TGGAATCCTAGGCTCCTGTCATCTGGCTGGAAGAGA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGATAATACACTGTCACTaGATAAAGCAGGCATTCATG +
Preference number: 2 (lower is better)
Translates to: NKRGKSNEASLRNTEASLIIHCH*IKQAFM
Trigger: CATGAATGCCTGCTTTATTCAGTGACAGTGTATTAT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAAAATGGACCATTTGGTaGGGAAAGTCAACTGAACTT +
Preference number: 2 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRKWTIW*GKSTEL
Trigger: AAGTTCAGTTGACTTTCCCCACCAAATGGTCCATTT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAGTTGCCCTTTCCTTTTaGTCACGTATCTTTCCATGT +
Preference number: 2 (lower is better)
Translates to: MINPSEMTSSESFGQYASVALSF*SRIFPC
Trigger: ACATGGAAAGATACGTGACCAAAAGGAAAGGGCAAC...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGGATGTTTTGAGCTCTTaGTCTTCGAATAGGAATATA +
Preference number: 2 (lower is better)
Translates to: CLLSIELELGQLPKWVSEDVLSS*SSNRNI
Trigger: TATATTCCTATTCGAAGACCAAGAGCTCAAAACATC...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR CAA 90 bp TTCAGTGAGTATTCAATAATTGCTCATTATCAAAAGGTTGTGAATTaGTCTCTCTTCCAGCCAGATGACAGGAGCCTAGGATTCCAATGG +
Preference number: 2 (lower is better)
Translates to: FSEYSIIAHYQKVVN*SLFQPDDRSLGFQW
Trigger: CCATTGGAATCCTAGGCTCCTGTCATCTGGCTGGAAGAGAGACAAATTCACAACCTTTTGATAATGAGCAATTATTGAATACTCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAAGTGAGGCACAAATGTaGCCCTATCAAAACATTCTA +
Preference number: 2 (lower is better)
Translates to: MINPSEMTSSESFGQYASSEAQM*PYQNIL
Trigger: TAGAATGTTTTGATAGGGTCACATTTGTGCCTCACT...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAAATGAGTTTATTACATaGTATAACCTTTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRNEFIT*YNLWVG
Trigger: GCCCACCCAAAGGTTATATCATGTAATAAACTCATT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAAGGAGGAATGATGTTTTaGGCTCTTGGTCTTCGAATA +
Preference number: 2 (lower is better)
Translates to: TWCLRFSLYVCLLSIELEGGMMF*ALGLRI
Trigger: TATTCGAAGACCAAGAGCTCAAAACATCATTCCTCC...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR-3UTR GCA 90 bp CATTTCATCAATAATACAAAGCTTTTGCCTATCCTTGCTATCAGGTGCCTGAATAGCCATGTTTTAACATaGCTTTCCAGGCAGTCTTGG +
Preference number: 2 (lower is better)
Translates to: HFINNTKLLPILAIRCLNSHVLT*LSRQSW
Trigger: CCAAGACTGCCTGGAAAGGCATGTTAAAACATGGCT...ATTCAGGCACCTGATAGCAAGGATAGGCAAAAGCTTTGTATTATTGATGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGTAATAGGCAACAACTaGAAAGAAGCCACGGGAACA +
Preference number: 2 (lower is better)
Translates to: YFLNCMLILWMQSRLVECVIGNN*KEATGT
Trigger: TGTTCCCGTGGCTTCTTTTCAGTTGTTGCCTATTAC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGATCTATGTAGCACCTTaGCAAAGTTCCTGGCACACA +
Preference number: 2 (lower is better)
Translates to: LHDITFGWAPYIKRELKKIYVAP*QSSWHT
Trigger: TGTGTGCCAGGAACTTTGCCAAGGTGCTACATAGAT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCACCACCCATTATAGGTTaGTGTGAACTTGAAATAAAA +
Preference number: 2 (lower is better)
Translates to: MINPSEMTSSESFGQYASPPIIG*CELEIK
Trigger: TTTTATTTCAAGTTCACAGCAACCTATAATGGGTGG...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCTGGAGATGAATAGGTaGTCATGGTTGCAAAACAAT +
Preference number: 2 (lower is better)
Translates to: LHDITFGWAPYIKRELKKLEMNR*SWLQNN
Trigger: ATTGTTTTGCAACCATGAGCACCTATTCATCTCCAG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGCAAAACCCATGATTTaGCAGTCCTATACAAAAGAG +
Preference number: 2 (lower is better)
Translates to: LHDITFGWAPYIKRELKKAKPMI*QSYTKE
Trigger: CTCTTTTGTATAGGACTGCCAAATCATGGGTTTTGC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTTCAAATGGACCATTTaGTGGGGAAAGTCAACTGAA +
Preference number: 2 (lower is better)
Translates to: LHDITFGWAPYIKRELKKFKWTI*WGKSTE
Trigger: TTCAGTTGACTTTCCCCACCAAATGGTCCATTTGAA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTGGACCTTTTATAAATaGAACAGATCCGATCACCTA +
Preference number: 2 (lower is better)
Translates to: YFLNCMLILWMQSRLVECWTFYK*NRSDHL
Trigger: TAGGTGATCGGATCTGTTTCATTTATAAAAGGTCCA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR GCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTACAGAAATAATAACATaGTTACCCACCCATTATAGG +
Preference number: 2 (lower is better)
Translates to: YFLNCMLILWMQSRLVECTEIIT*LPTHYR
Trigger: CCTATAATGGGTGGGTAAGCATGTTATTATTTCTGT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CCA 72 bp TGGTCCAGGCTCCAGGCTGGGGAGGATGTTAGGGATTaGTGTGGTCAGGACCAGCGCTGCTATGACTGCGGA +
Preference number: 3 (lower is better)
Translates to: WSRLQAGEDVRD*CGQDQRCYDCG
Trigger: TCCGCAGTCATAGCAGCGCTGGTCCTGACCACACCAATCCCTAACATCCTCCCCAGCCTGGAGCCTGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCACTTCTCAAGAGATACTaGCCTCAGGGCCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: IRIILDNTPPTRLPGVLALLKRY*PQGPRK
Trigger: TTTCCTGGGGCCCTGAGGCAAGTATCTCTTGAGAAG...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAGACACACGTTTTCCTTaGAGCTGTTCACCAATAAGA +
Preference number: 3 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPDTRFP*SCSPIR
Trigger: TCTTATTGGTGAACAGCTCAAAGGAAAACGTGTGTC...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR GCA 72 bp ATAGAGAAGGAAGAGCTCTTCCTTACAGTAGTAGGATaGCAACCAAGGCAGAAGCCACGGACTCACCATTTG +
Preference number: 3 (lower is better)
Translates to: IEKEELFLTVVG*QPRQKPRTHHL
Trigger: CAAATGGTGAGTCCGTGGCTTCTGCCTTGGTTGGCATCCTACTACTGTAAGGAAGAGCTCTTCCTTCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CCA 72 bp ACTTCTTCTGAGTCGTTTGGACAATACGCATCATCTTaGACAATACGCCTCCCACAAGGCTTCCTGGTGTTC +
Preference number: 3 (lower is better)
Translates to: TSSESFGQYASS*TIRLPQGFLVF
Trigger: GAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTATTGTCCAAACGACTCAGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CCA 72 bp CTTAGCCATGTTTTAACATGCCTTTCCAGGCAGTCTTaGCAGACGCAGAACTTTGACACCAAACTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: LSHVLTCLSRQS*QTQNFDTKLLA
Trigger: TGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATGGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACTGACAGCCCTATGTTaGAGATTTGACTCCACCTGT +
Preference number: 3 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRLTALC*RFDSTC
Trigger: ACAGGTGGAGTCAAATCTCAAACATAGGGCTGTCAG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGGGAGGAATGATGTTTaGAGCTCTTGGTCTTCGAAT +
Preference number: 3 (lower is better)
Translates to: PFEYRTRIGPASQMGFREGRNDV*SSWSSN
Trigger: ATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCC...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR GCA 72 bp TCTGGACTGAATGAAACAAGAGATAGGGCAACTAAATaGACTATGTGGTCCTGGATTGGGATGCTGAAACAC +
Preference number: 3 (lower is better)
Translates to: SGLNETRDRATK*TMWSWIGMLKH
Trigger: GTGTTTCAGCATCCCAATCCAGGACCACATAGTGCATTTAGTTGCCCTATCTCTTGTTTCATTCAGTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGGCAAAACCCATGATTaGGCAGTCCTATACAAAAGA +
Preference number: 3 (lower is better)
Translates to: NKRGKSNEASLRNTEASLGKTHD*AVLYKR
Trigger: TCTTTTGTATAGGACTGCCAAATCATGGGTTTTGCC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGCCTGATTTTCCCAAATaGCACCTATTAGTTGAGACT +
Preference number: 3 (lower is better)
Translates to: NKRGKSNEASLRNTEASLPDFPK*HLLVET
Trigger: AGTCTCAACTAATAGGTGCAATTTGGGAAAATCAGG...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CCA 72 bp AATAAAATAATCTATGTAGCACCTTGGCAAAGTTCCTaGCACACAGAGAAGGCTCAATACACATGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: NKIIYVAPWQSS*HTEKAQYTWAL
Trigger: TAGAGCCCATGTGTATTGAGCCTTCTCTGTGTGCCAGGAACTTTGCCAAGGTGCTACATAGATTATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAATGTACTTTCAGTTGTaGACAATCCAGGTAGAACAA +
Preference number: 3 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRMYFQL*TIQVEQ
Trigger: TTGTTCTACCTGGATTGTCAACAACTGAAAGTACAT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGAATCTATGTAGCACCTaGGCAAAGTTCCTGGCACAC +
Preference number: 3 (lower is better)
Translates to: LHDITFGWAPYIKRELKKNLCST*AKFLAH
Trigger: GTGTGCCAGGAACTTTGCCAAGGTGCTACATAGATT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 72 bp GGAAGTTATGATCAACCCTTCAGAAATGACTTCTTCTaGGTCGTTTGGACAATACGCATCATCTTGGACAAT +
Preference number: 3 (lower is better)
Translates to: GSYDQPFRNDFF*VVWTIRIILDN
Trigger: ATTGTCCAAGATGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCATAACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 72 bp ACACGTTTTCCTTTGAGCTGTTCACCAATAAGACAGTaGGCCTTTCTCAGGTCTTCATTTCCATATACCATT +
Preference number: 3 (lower is better)
Translates to: TRFPLSCSPIRQ*AFLRSSFPYTI
Trigger: AATGGTATATGGAAATGAAGACCTGAGAAAGGCTCACTGTCTTATTGGTGAACAGCTCAAAGGAAAACGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 72 bp ATACAAAGCTTTTGCCTATCCTTGCTATCAGGTGCCTaGATTAGTACACATACACACACACACTTGCCTAAA +
Preference number: 3 (lower is better)
Translates to: IQSFCLSLLSGA*ISTHTHTHLPK
Trigger: TTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCACCTGATAGCAAGGATAGGCAAAAGCTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTCAAAAGGTTGTGAATTaGTCTCTCTTCCAGCCAGAT +
Preference number: 3 (lower is better)
Translates to: YFLNCMLILWMQSRLVECQKVVN*SLFQPD
Trigger: ATCTGGCTGGAAGAGAGACAAATTCACAACCTTTTG...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 72 bp AAACCTTATGGGTCTTATCTAATGATAAACCAAAACTaGGGAACTTTCTACAAACTGGCCAATCCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: KPYGSYLMINQN*GTFYKLANPPQ
Trigger: TTGAGGAGGATTGGCCAGTTTGTAGAAAGTTCCTCAGTTTTGGTTTATCATTAGATAAGACCCATAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGATCTTTTTAGGCACTaGCATTCAGAAACATTCCTT +
Preference number: 3 (lower is better)
Translates to: LHDITFGWAPYIKRELKKDLFRH*HSETFL
Trigger: AAGGAATGTTTCTGAATGCAAGTGCCTAAAAAGATC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCAATTAAATACAGATTaGCAAGCCTTCTGGCCATTA +
Preference number: 3 (lower is better)
Translates to: LHDITFGWAPYIKRELKKQLNTD*QAFWPL
Trigger: TAATGGCCAGAAGGCTTGCAAATCTGTATTTAATTG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR TCA 72 bp GAATGTACTAGTCCTAAAAACTGGACCTTTTATAAATaGAACAGATCCGATCACCTATACCTTCTCTCAAAT +
Preference number: 3 (lower is better)
Translates to: ECTSPKNWTFYK*NRSDHLYLLSN
Trigger: ATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTCATTTATAAAAGGTCCAGTTTTTAGGACTAGTACATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAGACCGTGGGGATCGTaGTCTGTGCCAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRRPWGS*SVPGGT
Trigger: AGTGCCTCCTGGCACAGATCACGATCCCCACGGTCT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGCAGGGCTCCTGCTGTTaGCCTTTCCTTTTGGTCACG +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRQGSCC*PFLLVT
Trigger: CGTGACCAAAAGGAAAGGGCAACAGCAGGAGCCCTG...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGGACTGGCTCTGCATATaGCTTACTGGGTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRDWLCI*LTGLSG
Trigger: GCCACTCAACCCAGTAAGCCATATGCAGAGCCAGTC...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTTCTCAAGAGATACTTaGCTCAGGGCCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRFSRDT*LRAPGN
Trigger: GTTTCCTGGGGCCCTGAGGCAAGTATCTCTTGAGAA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAGGTCAAAGATTCAGCTaGCATGGTCCAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPGQRFS*HGPGSR
Trigger: CCTGGAGCCTGGACCATGGCAGCTGAATCTTTGACC...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTGGTCCCCACTAATCTaGAGGCTTGTTGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRWSPLI*RLVVTP
Trigger: AGGAGTGACAACAAGCCTCCAGATTAGTGGGGACCA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGGAGACTGCAGTGGCATaGACTCCTGAATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRETAVA*TPEFQC
Trigger: ACATTGGAATTCAGGAGTTCATGCCACTGCAGTCTC...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAGGATTCCAATGGTGTaGTCAGGACTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRRIPMV*SGLTSL
Trigger: CAGTGATGTCAGTCCTGAGCACACCATTGGAATCCT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAAACTCCTGGCAGATTACCGCAGACGCAGAACTTTaGCACCAAACTCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGSLGRRRTLTPNSWQITADAEL*HQTPGR
Trigger: TCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGC...GGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAGAGGATGTTAGGGATTaGTGTGGTCAGGACCAGCGC +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAEDVRD*CGQDQR
Trigger: GCGCTGGTCCTGACCACACCAATCCCTAACATCCTC...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAATTGGGTCCAGTTTCTaGAGGGGAAGGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAIGSSF*RGRWLS
Trigger: AGAGAGCCACCTTCCCCTTCAGAAACTGGACCCAAT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGACTGTGCTTTGTCACTaGGACATGCATCACATTTTC +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRTVLCH*DMHHIF
Trigger: GAAAATGTGATGCATGTCTCAGTGACAAAGCACAGT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAGAAATGACTTCTTCTaGGTCGTTTGGACAATACGC +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRRNDFF*VVWTIR
Trigger: GCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACTTACAGTAGTAGGATaGCAACCAAGGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPLTVVG*QPRQKP
Trigger: TGGCTTCTGCCTTGGTTGGCATCCTACTACTGTAAG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAAGCAGTTGTGGGCCTTaGCCTAATGAGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLASSCGP*PNETWS
Trigger: GGACCAAGTCTCATTAGGCCAAGGCCCACAACTGCT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGGTTGCCCTTTCCTTTTaGTCACGTATCTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRVALSF*SRIFPC
Trigger: ACATGGAAAGATACGTGACCAAAAGGAAAGGGCAAC...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGCATTCACCAACTCCTTaGTGTAATCCGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRHSPTP*CNPDQK
Trigger: TTTTTGATCCGGATTACATCAAGGAGTTGGTGAATG...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGCTCAAAGGATTGAATTaGAGGTGTCAATGTGAACTC +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRLKGLN*RCQCEL
Trigger: GAGTTCACATTGACACCTTCAATTCAATCCTTTGAG...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAGTTCTAGTTGCCTCTaGCAACTTGACCATATTTCT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRSSSCL*QLDHIS
Trigger: AGAAATATGGTCAAGTTGGCAGAGGCAACTAGAACT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAAAACAGAGACTGCAGTaGCATGAACTCCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPKQRLQ*HELLNS
Trigger: GGAATTCAGGAGTTCATGCCACTGCAGTCTCTGTTT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACTGGGTCATAGAGTTTaGCACTATCACAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPLGHRV*HYHRET
Trigger: AGTCTCTCTGTGATAGTGCCAAACTCTATGACCCAG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAAACTCCTGGCAGATTACCTGGAACTTAAGGACTTaGGCCCCATTTCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGSLGRRRTLTPNSWQITWNLRT*APFQKL
Trigger: CAACTTCTGAAATGGGGCTCAAGTCCTTAAGTTCCA...GGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGATTTCTGCAGCATTTTaGAGATCAACAGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRISAAF*RSTELR
Trigger: CCTCAATTCTGTTGATCTTCAAAATGCTGCAGAAAT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACCAAGTTTTAGCATATaGCAAAGCCAGCTCGATAGA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPPSFSI*QSQLDR
Trigger: TCTATCGAGCTGGCTTTGTCATATGCTAAAACTTGG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTTGAATTTGTGGCCTTaGCAAATTCACTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRLNLWP*QIHCTL
Trigger: AAGAGTACAGTGAATTTGTCAAGGCCACAAATTCAA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACGTGGAAGTTTTCGATaGAAGTCTCCTGGACTTATA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPRGSFR*KSPGLI
Trigger: TATAAGTCCAGGAGACTTTCATCGAAAACTTCCACG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAGTGTTCTGGGTGCTCTaGCAGGAGCGAGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRVFWVL*QEREGR
Trigger: CCTACCCTCTCGCTCCTGTCAGAGCACCCAGAACAC...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTGGACCTTTTATAAATaGAACAGATCCGATCACCTA +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRWTFYK*NRSDHL
Trigger: TAGGTGATCGGATCTGTTTCATTTATAAAAGGTCCA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTTAACCTCAAAGGATTaGATTGAAGGTGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRLTSKD*IEGVNV
Trigger: CACATTGACACCTTCAATTCAATCCTTTGAGGTTAA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCATGCAGATGCTGCATGTaGAAGAGGTTAACTGTTACA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPCRCCM*KRLTVT
Trigger: TGTAACAGTTAACCTCTTCCACATGCAGCATCTGCA...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAGTGGCATTGATAGAATaGTCCCCACTAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAVALIE*SPLIWR
Trigger: CCTCCAGATTAGTGGGGACCATTCTATCAATGCCAC...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTGAGACTGCAGTGGCATaGACTCCTGAATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSETAVA*TPEFQC
Trigger: ACATTGGAATTCAGGAGTTCATGCCACTGCAGTCTC...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCATTGTTTTCTTCTGCATaGTCTACTACCCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPLFSSA*STTRFR
Trigger: TCTAAAGCGGGTAGTAGATCATGCAGAAGAAAACAA...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAAGTGAGGCACAAATGTaGCCCTATCAAAACATTCTA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPSEAQM*PYQNIL
Trigger: TAGAATGTTTTGATAGGGTCACATTTGTGCCTCACT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATCACCAATAAGACAGTaGGCCTTTCTCAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLASPIRQ*AFLRSS
Trigger: TGAAGACCTGAGAAAGGCTCACTGTCTTATTGGTGA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTTCTGTAGAGTTTGCTaGTCAAAGCCATTAAATTTG +
Preference number: 4 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRFCRVC*SKPLNL
Trigger: CAAATTTAATGGCTTTGACCAGCAAACTCTACAGAA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCATTCAAATGGACCATTTaGTGGGGAAAGTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPFKWTI*WGKSTE
Trigger: TTCAGTTGACTTTCCCCACCAAATGGTCCATTTGAA...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAAACTCCTGGCAGATTACCAAGATCGTTACTTTTTaGAGAGCCTCCTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PGSLGRRRTLTPNSWQITKIVTF*RASSSN
Trigger: GTTGGAAGAGGAGGCTCTCCAAAAAGTAACGATCTT...GGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp CCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAAACTCCTGGCAGATTACCCATTCACCAACTCCTTaGTGTAATCCGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: PGSLGRRRTLTPNSWQITHSPTP*CNPDQK
Trigger: TTTTTGATCCGGATTACATCAAGGAGTTGGTGAATG...GGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCATGTGAGAGCTGCCTTTaGCATCAATGTTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPCESCL*HQCFLK
Trigger: TTTAAGAAAACATTGATGTCAAAGGCAGCTCTCACA...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAAATGAGTTTATTACATaGTATAACCTTTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPNEFIT*YNLWVG
Trigger: GCCCACCCAAAGGTTATATCATGTAATAAACTCATT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACTACGCTGGACAAAGTaGCAGGGAGCCCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRLRWTK*QGALKA
Trigger: TGCCTTTAGGGCTCCCTGGCACTTTGTCCAGCGTAG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAACAAATTTGTTAGCCTaGAGAGCTGCAATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPTNLLA*RAAIVC
Trigger: ACAAACAATTGCAGCTCTCCAGGCTAACAAATTTGT...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCACCATCTTCTATCTTTTaGGATGCTGATTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAPSSIF*DADSAS
Trigger: AGAGGCTGAATCAGCATCCCAAAAGATAGAAGATGG...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CATGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCTGTGGGAGAACTTCCTaGTATCATTCACCAACTCCT +
Preference number: 4 (lower is better)
Translates to: HVLTCLSRQSWQTQNFDTCGRTS*YHSPTP
Trigger: AGGAGTTGGTGAATGATATCAGGAAGTTCTCCCACA...GGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp CCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAAACTCCTGGCAGATTACCATTTCTGCAGCATTTTaGAGATCAACAGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: PGSLGRRRTLTPNSWQITISAAF*RSTELR
Trigger: CCTCAATTCTGTTGATCTTCAAAATGCTGCAGAAAT...GGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCATTGCCCAGGACAAGCTaGTGCTTTGTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASLPRTS*CFVWVW
Trigger: CCAGACCCAGACAAAGCATCAGCTTGTCCTGGGCAA...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGAGTCTTCTTTAGGTTaGCCAGTTGCTTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLESSLG*PVACPG
Trigger: TCCTGGGCAAGCAACTGGTCAACCTAAAGAAGACTC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAAATGTTAGTTCTAGTTaGCTCTGCCAACTTGACCAT +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLANVSSS*LCQLDH
Trigger: ATGGTCAAGTTGGCAGAGGCAACTAGAACTAACATT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CATGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCCAGATGCTCCTCTTCTaGACGAAACATGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: HVLTCLSRQSWQTQNFDTQMLLF*TKHGRL
Trigger: AAGTCTTCCATGTTTCGTGCAGAAGAGGAGCATCTG...GGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGAAGCAGCCTGCAGATaGTGCATGTGGAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREEAACR*CMWKRL
Trigger: TAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTC...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCACATCTTGTTTTCTTCTaGATGATCTACTACCCGCTT +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAHLVFF*MIYYPL
Trigger: AAGCGGGTAGTAGATCATGCAGAAGAAAACAAGATG...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTTGCAGATGCTGCATGTaGAAGAGGTTAACTGTTACA +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSCRCCM*KRLTVT
Trigger: TGTAACAGTTAACCTCTTCCACATGCAGCATCTGCA...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp AGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAAAGCAGTTGTGGGCCTTaGCCTAATGAGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLYVCLLSIELELGQLPKSSCGP*PNETWS
Trigger: GGACCAAGTCTCATTAGGCCAAGGCCCACAACTGCT...TTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCATCACTCTCTGAAGTATaGATATCTTCCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPSLSEV*ISSFEE
Trigger: TTCTTCAAAGGAAGATATCCATACTTCAGAGAGTGA...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGATATCAGTAGAGAGTTaGCCTGATGCCCAAGCACGT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLISVES*PDAQAR
Trigger: ACGTGCTTGGGCATCAGGTCAACTCTCTACTGATAT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAATATCAGTAGAGAGTTaGCCTGATGCCCAAGCACGT +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREISVES*PDAQAR
Trigger: ACGTGCTTGGGCATCAGGTCAACTCTCTACTGATAT...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TTCTCAAAATGTGGATCTTCACCAACAGCATCAGCACGACCTGAGAGCCTATTAGAGACTGCAGTGGCATaGACTCCTGAATTCCAATGT +
Preference number: 4 (lower is better)
Translates to: FSKCGSSPTASARPESLLETAVA*TPEFQC
Trigger: ACATTGGAATTCAGGAGTTCATGCCACTGCAGTCTC...TAATAGGCTCTCAGGTCGTGCTGATGCTGTTGGTGAAGATCCACATTTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGTGCGAAACTTGTGTGTaGGAGCTGCCTTTGACATCA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLCETCV*ELPLTS
Trigger: TGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCA...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAATGCGAAACTTGTGTGTaGGAGCTGCCTTTGACATCA +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFRECETCV*ELPLTS
Trigger: TGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCA...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATTTGCTTTCACTCTCTaGAGTATGGATATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAFAFTL*SMDIFL
Trigger: AAGGAAGATATCCATACTTCAGAGAGTGAAAGCAAA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATCATACTGTTTGTCCTaGATTTTCTGTAGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLASYCLS*IFCRVC
Trigger: GCAAACTCTACAGAAAATTCAGGACAAACAGTATGA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAATAATACACTGTCACTaGATAAAGCAGGCATTCATG +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAIIHCH*IKQAFM
Trigger: CATGAATGCCTGCTTTATTCAGTGACAGTGTATTAT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGACACAGAAGCCAGCTTaGAGAGACTCCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLTQKPA*RDSQKP
Trigger: TGGTTTTTGGGAGTCTCTTCAAGCTGGCTTCTGTGT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGCCACTTGAAGACAGATaGTCCTCTTCTGCACGAAAC +
Preference number: 4 (lower is better)
Translates to: LLSIELELGQLPKWVSEKPLEDR*SSSARN
Trigger: GTTTCGTGCAGAAGAGGAGCATCTGTCTTCAAGTGG...CTTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATAGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNIAREAA*RCCMWK
Trigger: CTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGC...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTCTTGGAACACTACAATaGCTTCACAATCCCTACATT +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSLGTLQ*LHNPYI
Trigger: AATGTAGGGATTGTGAAGGCATTGTAGTGTTCCAAG...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTCTAACGCATTTTGCTTaGGTTCTGATTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSLTHFA*VLIPQM
Trigger: CATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAG...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAGGTCAGGACCAGCGCTaGTATGACTGCGGATTTATT +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRGQDQR*YDCGFI
Trigger: AATAAATCCGCAGTCATAGCAGCGCTGGTCCTGACC...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAAAATGCTTCCTGACATaGTCTAACATTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAKCFLT*SNIFSI
Trigger: GATGGAGAAAATGTTAGACCATGTCAGGAAGCATTT...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGTGTGGGAGAACTTCCTaGTATCATTCACCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LLSIELELGQLPKWVSEKCGRTS*YHSPTP
Trigger: AGGAGTTGGTGAATGATATCAGGAAGTTCTCCCACA...CTTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTTTGAATTTGTGGCCTTaGCAAATTCACTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSLNLWP*QIHCTL
Trigger: AAGAGTACAGTGAATTTGTCAAGGCCACAAATTCAA...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp CTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGTCTACCAAGCGTGCTTaGTTTGAATACTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSIELELGQLPKWVSEKSTKRA*FEYSAR
Trigger: CCTTGCAGAGTATTCAAATCAAGCACGCTTGGTAGA...CTTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAAATGTTGTCCAATGTTaGGGCTGCAGTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRNVVQC*GCSVLG
Trigger: ACCCAGAACACTGCAGCCTCAACATTGGACAACATT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGTCTGGGTCTGGCATTaGCTTCACCACGAGACCGTG +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECVWVWH*LHHETV
Trigger: CACGGTCTCGTGGTGAAGTCAATGCCAGACCCAGAC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACTCTCTTCCAGCCAGATaGCAGGAGCCTAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYSLPAR*QEPRIP
Trigger: TGGAATCCTAGGCTCCTGTCATCTGGCTGGAAGAGA...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CATGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCAGTTCTAGTTGCCTCTaGCAACTTGACCATATTTCT +
Preference number: 4 (lower is better)
Translates to: HVLTCLSRQSWQTQNFDTSSSCL*QLDHIS
Trigger: AGAAATATGGTCAAGTTGGCAGAGGCAACTAGAACT...GGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp TTCTCAAAATGTGGATCTTCACCAACAGCATCAGCACGACCTGAGAGCCTATTAAGCCATGTTTTAACATaGCTTTCCAGGCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSKCGSSPTASARPESLLSHVLT*LSRQSW
Trigger: CCAAGACTGCCTGGAAAGGCATGTTAAAACATGGCT...TAATAGGCTCTCAGGTCGTGCTGATGCTGTTGGTGAAGATCCACATTTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp TTCTCAAAATGTGGATCTTCACCAACAGCATCAGCACGACCTGAGAGCCTATTAAAACAGAGACTGCAGTaGCATGAACTCCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: FSKCGSSPTASARPESLLKQRLQ*HELLNS
Trigger: GGAATTCAGGAGTTCATGCCACTGCAGTCTCTGTTT...TAATAGGCTCTCAGGTCGTGCTGATGCTGTTGGTGAAGATCCACATTTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGCTTCTTCTACTTTTTaGAGAGCCTCCTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREASSTF*RASSSN
Trigger: GTTGGAAGAGGAGGCTCTCCAAAAAGTAGAAGAAGC...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAGGGTAAGATCACACTaGAAAACAAGTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLRVRSH*KTSVRS
Trigger: ACTCCGGACACTTGTTTTCCAGTGTGATCTTACCCT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGACTGGATGGTGTTCGTaGAAGTTTTCGATGAAAGTC +
Preference number: 4 (lower is better)
Translates to: CLLSIELELGQLPKWVSETGWCS*KFSMKV
Trigger: GACTTTCATCGAAAACTTCCACGAACACCATCCAGT...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAGTCACTCCTTTTTCCTaGAGTGCACTGGGCATGATC +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASVTPFS*SALGMI
Trigger: GATCATGCCCAGTGCACTCCAGGAAAAAGGAGTGAC...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGCAATACGCATCATCTTaGACAATACGCCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLQYASS*TIRLPQ
Trigger: TTGTGGGAGGCGTATTGTCCAAGATGATGCGTATTG...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTCTGAATGAGAAACTCTaGGGGATGGGCTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSLNEKL*GMGLAM
Trigger: CATGGCTAAGCCCATCCCCCAGAGTTTCTCATTCAG...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR CAA 72 bp GGATGCCAACCAAGGCAGAAGCCACGGACTCACCATTaGACAACCAAAATAGTAATTGGTTCAGTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GCQPRQKPRTHH*TTKIVIGSVKN
Trigger: ATTCTTGACTGAACCAATTACTATTTTGGTTGTCAAATGGTGAGTCCGTGGCTTCTGCCTTGGTTGGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTATATCAGTAGAGAGTTaGCCTGATGCCCAAGCACGT +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSISVES*PDAQAR
Trigger: ACGTGCTTGGGCATCAGGTCAACTCTCTACTGATAT...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAACCAAGTTTTAGCATATaGCAAAGCCAGCTCGATAGA +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREPSFSI*QSQLDR
Trigger: TCTATCGAGCTGGCTTTGTCATATGCTAAAACTTGG...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGTTTGGAAAACAGCCTTaGTCAACAACACCTATGCTA +
Preference number: 4 (lower is better)
Translates to: CLLSIELELGQLPKWVSEFGKQP*STTPML
Trigger: TAGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAA...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCCTCTCTCACTGACCTaGCTGGCTCTGCATATGGCT +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKPLSLT*LALHMA
Trigger: AGCCATATGCAGAGCCAGTCAGGTCAGTGAGAGAGG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGATAATGTTCTGGAGATaGATAGGTGCTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLIMFWR*IGAHGC
Trigger: GCAACCATGAGCACCTATTCATCTCCAGAACATTAT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGTAGGTGACTATTCTTaGATGTGTGTAGACACACGT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLVGDYS*MCVDTR
Trigger: ACGTGTGTCTACACACATTCAAGAATAGTCACCTAC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACTTCCAAGTAGAGGCTaGACAAATTTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRLPSRG*TNLLAW
Trigger: CCAGGCTAACAAATTTGTGCAGCCTCTACTTGGAAG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCACCACTTGAAGACAGATaGTCCTCTTCTGCACGAAAC +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASPLEDR*SSSARN
Trigger: GTTTCGTGCAGAAGAGGAGCATCTGTCTTCAAGTGG...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECAREAA*RCCMWK
Trigger: CTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAGGACCTGTTATATCTaGACTGTTAGAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLRTCYI*TVRASV
Trigger: GACAGATGCTCTAACAGTGCAGATATAACAGGTCCT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAAGGACCTGTTATATCTaGACTGTTAGAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFRERTCYI*TVRASV
Trigger: GACAGATGCTCTAACAGTGCAGATATAACAGGTCCT...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGCATCTTGTTTTCTTCTaGATGATCTACTACCCGCTT +
Preference number: 4 (lower is better)
Translates to: CLLSIELELGQLPKWVSEHLVFF*MIYYPL
Trigger: AAGCGGGTAGTAGATCATGCAGAAGAAAACAAGATG...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAAAAGGGCTGGTTATTaGTCCCTAGACCTTTACATC +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLKRAGY*SLDLYI
Trigger: GATGTAAAGGTCTAGGGAGCAATAACCAGCCCTTTT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACATAGTTCCACTGGATaGTGTTCGTGGAAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRHSSTG*CSWKFS
Trigger: CGAAAACTTCCACGAACACCATCCAGTGGAACTATG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAACATAGTTCCACTGGATaGTGTTCGTGGAAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: SLYVCLLSIELELGQLPKHSSTG*CSWKFS
Trigger: CGAAAACTTCCACGAACACCATCCAGTGGAACTATG...TTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAATGTTCCAAGGGAATTaGGTCCAGTTTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASMFQGN*VQFLKG
Trigger: CCCCTTCAGAAACTGGACCCAATTCCCTTGGAACAT...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTATGTTCCAAGGGAATTaGGTCCAGTTTCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RFSLYVCLLSIELELGQLMFQGN*VQFLKG
Trigger: CCCCTTCAGAAACTGGACCCAATTCCCTTGGAACAT...AAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp CTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGAATCCCTACATTTCGTaGGGGATCTCAATTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LLSIELELGQLPKWVSEKNPYIS*GISICE
Trigger: TTCGCAAATTGAGATCCCCCACGAAATGTAGGGATT...CTTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTTCACTCTCTGAAGTATaGATATCTTCCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RNITSPVASGSCIGQLRSSLSEV*ISSFEE
Trigger: TTCTTCAAAGGAAGATATCCATACTTCAGAGAGTGA...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGTCTAATCTTGGTCCTTaGAGTATGCCTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLSNLGP*SMPLHI
Trigger: AATGTGGAGAGGCATACTCCAAGGACCAAGATTAGA...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGATCTAATCTTGGTCCTTaGAGTATGCCTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: LPFEYRTRIGPASQMGFRSNLGP*SMPLHI
Trigger: AATGTGGAGAGGCATACTCCAAGGACCAAGATTAGA...TCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCTTAAGGCTCTACGCTaGACAAAGTGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKLKALR*TKCQGA
Trigger: GGCTCCCTGGCACTTTGTCCAGCGTAGAGCCTTAAG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTCTCAAAATGTGGATCTTCACCAACAGCATCAGCACGACCTGAGAGCCTATTATTGACACCAAACTCCTaGCAGATTACCGCTAATTCA +
Preference number: 4 (lower is better)
Translates to: FSKCGSSPTASARPESLLLTPNS*QITANS
Trigger: TGAATTAGCGGTAATCTGCCAGGAGTTTGGTGTCAA...TAATAGGCTCTCAGGTCGTGCTGATGCTGTTGGTGAAGATCCACATTTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAGTCACCTGTGGCTTCTaGCAGCTGTATCGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEVTCGF*QLYRTA
Trigger: AGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGAC...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
3UTR CAA 72 bp AAGAGCACTAACCATCAAAATCTGACAGCCCTATGTTaGAGATTTGACTCCACCTGTTACACCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: KSTNHQNLTALC*RFDSTCYTCGT
Trigger: TGTTCCACAGGTGTAACAGGTGGAGTCAAATCTCAAACATAGGGCTGTCAGATTTTGATGGTTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAACTTTCACTTTTGCAGTaGGCATTTCTGCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFRELSLLQ*AFLQHF
Trigger: AAAATGCTGCAGAAATGCTCACTGCAAAAGTGAAAG...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAATTGGGTCCAGTTTCTaGAGGGGAAGGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEIGSSF*RGRWLS
Trigger: AGAGAGCCACCTTCCCCTTCAGAAACTGGACCCAAT...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCAAGCGTGCTTGATTTaGATACTCTGCAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYQACLI*ILCKGG
Trigger: TCCTCCCTTGCAGAGTATTCAAATCAAGCACGCTTG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCATATGGCTTACTGGGTTaGGTGGCATTGATAGAATGG +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASYGLLG*VALIEW
Trigger: CCATTCTATCAATGCCACTCAACCCAGTAAGCCATA...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGAGAGGGTAGGAATCTaGAGACCGTCTCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECERVGI*RPSLRC
Trigger: GCATCTGAGAGACGGTCTTCAGATTCCTACCCTCTC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGGACCAGCGCTGCTATaGCTGCGGATTTATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKGPALL*LRIYLA
Trigger: TGCCAAATAAATCCGCAGTCATAGCAGCGCTGGTCC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCACAGATGCTCCTCTTCTaGACGAAACATGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASQMLLF*TKHGRL
Trigger: AAGTCTTCCATGTTTCGTGCAGAAGAGGAGCATCTG...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGATCTTCCACTTGAAGACAGATaGTCCTCTTCTGCACGAAAC +
Preference number: 4 (lower is better)
Translates to: SQTPKFRSQHSGSQNVDLPLEDR*SSSARN
Trigger: GTTTCGTGCAGAAGAGGAGCATCTGTCTTCAAGTGG...AAGATCCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGCTTGGAACACTACAATaGCTTCACAATCCCTACATT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLLGTLQ*LHNPYI
Trigger: AATGTAGGGATTGTGAAGGCATTGTAGTGTTCCAAG...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAATTTCCTAACGCATTTTaGTTGCGTTCTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREFPNAF*LRSDSS
Trigger: TGAGGAATCAGAACGCAAGCAAAATGCGTTAGGAAA...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGATTGGTCCTTGGAGTATaGCTCTCCACATTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRLVLGV*LSTLFV
Trigger: AACAAACAATGTGGAGAGGCATACTCCAAGGACCAA...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACAGCGCTGCTATGACTaGGGATTTATTTGGCATATT +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRQRCYD*GFIWHI
Trigger: AATATGCCAAATAAATCCGCAGTCATAGCAGCGCTG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCATGGCCTAATGAGACTTaGTCCAAATATCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASWPNET*SKYHPQ
Trigger: TTGGGGGTGATATTTGGACCAAGTCTCATTAGGCCA...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAACCATCTTCTATCTTTTaGGATGCTGATTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLYVCLLSIELELGQLPKPSSIF*DADSAS
Trigger: AGAGGCTGAATCAGCATCCCAAAAGATAGAAGATGG...TTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGATCCCTACACAAATTGTaGAATTTCACCTTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRSLHKL*NFTFEV
Trigger: GACCTCGAAGGTGAAATTCCACAATTTGTGTAGGGA...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAATCTATGTAGCACCTTaGCAAAGTTCCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASIYVAP*QSSWHT
Trigger: TGTGTGCCAGGAACTTTGCCAAGGTGCTACATAGAT...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGCAAGCGTGCTTGATTTaGATACTCTGCAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WCLRFSLYVCLLSIELELQACLI*ILCKGG
Trigger: TCCTCCCTTGCAGAGTATTCAAATCAAGCACGCTTG...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACTCTACCAAGCGTGCTTaGTTTGAATACTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYSTKRA*FEYSAR
Trigger: CCTTGCAGAGTATTCAAATCAAGCACGCTTGGTAGA...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACTCCACATTGTTTGTTaGCCTATCAGATTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRLHIVC*PIRFQR
Trigger: TCTCTGAAATCTGATAGGTCAACAAACAATGTGGAG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAATCACCCAAATAACTaGGGTACAATTCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLNHPNN*GTILSA
Trigger: AGCAGATAGAATTGTACCTCAGTTATTTGGGTGATT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTTTGCTATCAGGTGCCTaGATTAGTACACATACACAC +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSLLSGA*ISTHTH
Trigger: GTGTGTATGTGTACTAATTCAGGCACCTGATAGCAA...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAACTTCCAAGTAGAGGCTaGACAAATTTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TWCLRFSLYVCLLSIELELPSRG*TNLLAW
Trigger: CCAGGCTAACAAATTTGTGCAGCCTCTACTTGGAAG...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAACAGATGCTCCTCTTCTaGACGAAACATGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TWCLRFSLYVCLLSIELEQMLLF*TKHGRL
Trigger: AAGTCTTCCATGTTTCGTGCAGAAGAGGAGCATCTG...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGAAGCAGCCTGCAGATaGTGCATGTGGAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECEAACR*CMWKRL
Trigger: TAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAATTTCCTTTTTCACTaGATGAGTCCACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLNFLFH*MSPLIP
Trigger: TGGAATCAGTGGACTCATCCAGTGAAAAAGGAAATT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGACAAATTTGTTAGCCTaGAGAGCTGCAATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSIELELGQLPKWVSEKTNLLA*RAAIVC
Trigger: ACAAACAATTGCAGCTCTCCAGGCTAACAAATTTGT...CTTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATACTGGGTCATAGAGTTTaGCACTATCACAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNILGHRV*HYHRET
Trigger: AGTCTCTCTGTGATAGTGCCAAACTCTATGACCCAG...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGCTGATTCAGCCTCTTaGTCTAGAAGCAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: WCLRFSLYVCLLSIELELADSAS*SRSNCA
Trigger: AGCACAGTTGCTTCTAGACCAAGAGGCTGAATCAGC...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACGACTGCGGATTTATTTaGCATATTTGGGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYDCGFI*HIWDWV
Trigger: CACCCAGTCCCAAATATGCCAAATAAATCCGCAGTC...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTGTGGTTCTCAAAATGTaGATCTTCACCAACAGCATC +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSVVLKM*IFTNSI
Trigger: GATGCTGTTGGTGAAGATCCACATTTTGAGAACCAC...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTCTTTCACTTTTGCAGTaGGCATTTCTGCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSLSLLQ*AFLQHF
Trigger: AAAATGCTGCAGAAATGCTCACTGCAAAAGTGAAAG...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATACGTGGAAGTTTTCGATaGAAGTCTCCTGGACTTATA +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNIRGSFR*KSPGLI
Trigger: TATAAGTCCAGGAGACTTTCATCGAAAACTTCCACG...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATAACTGTGCTTTGTCACTaGGACATGCATCACATTTTC +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNITVLCH*DMHHIF
Trigger: GAAAATGTGATGCATGTCTCAGTGACAAAGCACAGT...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACTTTAGCCTTGGTCTCTaGCACATTGGATTCACATCA +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYFSLGL*HIGFTS
Trigger: TGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAA...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAGGTTGCAAAACAATGTaGATATACTTAATGCCACTG +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRGCKTM*IYLMPL
Trigger: CAGTGGCATTAAGTATATTCACATTGTTTTGCAACC...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TTCTGGTCAGTGATTCAAAGGCAGTTGATTTTAATGGACAGCCATGTACAATTTCTTCCAAGTAGAGGCTaGACAAATTTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FWSVIQRQLILMDSHVQFLPSRG*TNLLAW
Trigger: CCAGGCTAACAAATTTGTGCAGCCTCTACTTGGAAG...AAATTGTACATGGCTGTCCATTAAAATCAACTGCCTTTGAATCACTGACCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGTCTTAGAAGGTCTTTaGTTTTTAGAAGAATTCGGT +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLVLEGL*FLEEFG
Trigger: ACCGAATTCTTCTAAAAAGCAAAGACCTTCTAAGAC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCATTTCCTAACGCATTTTaGTTGCGTTCTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: MINPSEMTSSESFGQYASFPNAF*LRSDSS
Trigger: TGAGGAATCAGAACGCAAGCAAAATGCGTTAGGAAA...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATATTGGTCCTTGGAGTATaGCTCTCCACATTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNILVLGV*LSTLFV
Trigger: AACAAACAATGTGGAGAGGCATACTCCAAGGACCAA...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TTCTTTCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGGCTTTTGCCTATCCTTaGTATCAGGTGCCTGAATTA +
Preference number: 4 (lower is better)
Translates to: FFHKLQNSGLSIVVLKMWAFAYP*YQVPEL
Trigger: TAATTCAGGCACCTGATAGCAAGGATAGGCAAAAGC...CCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp AGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAAAATTTCCTTTTTCACTaGATGAGTCCACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: SLYVCLLSIELELGQLPKNFLFH*MSPLIP
Trigger: TGGAATCAGTGGACTCATCCAGTGAAAAAGGAAATT...TTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACAATCCCTACATTTCGTaGGGGATCTCAATTTGCGAA +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYNPYIS*GISICE
Trigger: TTCGCAAATTGAGATCCCCCACGAAATGTAGGGATT...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGCTGATTCAGCCTCTTaGTCTAGAAGCAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECADSAS*SRSNCA
Trigger: AGCACAGTTGCTTCTAGACCAAGAGGCTGAATCAGC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTGGTCTCTGACACATTaGATTCACATCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKWSLTH*IHIRQA
Trigger: GGCTTGCCTGATGTGAATCCAATGTGTCAGAGACCA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACGAACTTTCTACAAACTaGCCAATCCTCCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYELSTN*PILLKC
Trigger: ACACTTGAGGAGGATTGGCCAGTTTGTAGAAAGTTC...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGTACAATGGAGAAACCTaGTATATACTATCTGAACCA +
Preference number: 4 (lower is better)
Translates to: NKRGKSNEASLRNTEASLYNGET*YILSEP
Trigger: TGGTTCAGATAGTATATACCAGGTTTCTCCATTGTA...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAAGATGTTTTGAGCTCTTaGTCTTCGAATAGGAATATA +
Preference number: 4 (lower is better)
Translates to: PFEYRTRIGPASQMGFREDVLSS*SSNRNI
Trigger: TATATTCCTATTCGAAGACCAAGAGCTCAAAACATC...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTGGAACTTAAGGACTTaGGCCCCATTTCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECWNLRT*APFQKL
Trigger: CAACTTCTGAAATGGGGCTCAAGTCCTTAAGTTCCA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTGTGGGAGAACTTCCTaGTATCATTCACCAACTCCT +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECCGRTS*YHSPTP
Trigger: AGGAGTTGGTGAATGATATCAGGAAGTTCTCCCACA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTATTTCTGCAGCATTTTaGAGATCAACAGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: RFSLYVCLLSIELELGQLISAAF*RSTELR
Trigger: CCTCAATTCTGTTGATCTTCAAAATGCTGCAGAAAT...AAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCTTTCACTTTTGCAGTaGGCATTTCTGCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYLSLLQ*AFLQHF
Trigger: AAAATGCTGCAGAAATGCTCACTGCAAAAGTGAAAG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TTCTGGTCAGTGATTCAAAGGCAGTTGATTTTAATGGACAGCCATGTACAATTTCCAAGTTTTAGCATATaGCAAAGCCAGCTCGATAGA +
Preference number: 4 (lower is better)
Translates to: FWSVIQRQLILMDSHVQFPSFSI*QSQLDR
Trigger: TCTATCGAGCTGGCTTTGTCATATGCTAAAACTTGG...AAATTGTACATGGCTGTCCATTAAAATCAACTGCCTTTGAATCACTGACCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR TCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGTCCAAACACTTTCGATaGCAAACAAGGAGACACTCT +
Preference number: 4 (lower is better)
Translates to: WCLRFSLYVCLLSIELELSKHFR*QTRRHS
Trigger: AGAGTGTCTCCTTGTTTGTCATCGAAAGTGTTTGGA...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGTTTTCTTCTGCATaGTCTACTACCCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TWCLRFSLYVCLLSIELELFSSA*STTRFR
Trigger: TCTAAAGCGGGTAGTAGATCATGCAGAAGAAAACAA...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCTCCACATTGTTTGTTaGCCTATCAGATTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLRFSLYVCLLSIELELGLHIVC*PIRFQR
Trigger: TCTCTGAAATCTGATAGGTCAACAAACAATGTGGAG...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TTCTGGTCAGTGATTCAAAGGCAGTTGATTTTAATGGACAGCCATGTACAATTTAAAATGTTGACCTACTaGATGAGAAACTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FWSVIQRQLILMDSHVQFKMLTY*MRNSGG
Trigger: TCCCCCAGAGTTTCTCATTCAGTAGGTCAACATTTT...AAATTGTACATGGCTGTCCATTAAAATCAACTGCCTTTGAATCACTGACCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp TTCTTTCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGAATGTTAGTTCTAGTTaGCTCTGCCAACTTGACCAT +
Preference number: 4 (lower is better)
Translates to: FFHKLQNSGLSIVVLKMWNVSSS*LCQLDH
Trigger: ATGGTCAAGTTGGCAGAGGCAACTAGAACTAACATT...CCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR GCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTCCTTTTTCCTGGAGTaGACTGGGCATGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKSFFLE*TGHDHC
Trigger: ACAATGATCATGCCCAGTGCACTCCAGGAAAAAGGA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTACAAATTTGTTAGCCTaGAGAGCTGCAATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSTNLLA*RAAIVC
Trigger: ACAAACAATTGCAGCTCTCCAGGCTAACAAATTTGT...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGCTTCTTCTACTTTTTaGAGAGCCTCCTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKASSTF*RASSSN
Trigger: GTTGGAAGAGGAGGCTCTCCAAAAAGTAGAAGAAGC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAAGGGTAAGATCACACTaGAAAACAAGTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIERVRSH*KTSVRS
Trigger: ACTCCGGACACTTGTTTTCCAGTGTGATCTTACCCT...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAATGGCCTAATGAGACTTaGTCCAAATATCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEWPNET*SKYHPQ
Trigger: TTGGGGGTGATATTTGGACCAAGTCTCATTAGGCCA...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTAGGGATGCATTCAAATaGACCATTTGGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECRDAFK*TIWWGK
Trigger: CTTTCCCCACCAAATGGTCCATTTGAATGCATCCCT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGGATGCAGAGTAGATTaGTTGAGTGTGAGGACACTT +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKGCRVD*LSVRTL
Trigger: AAGTGTCCTCACACTCAACCAATCTACTCTGCATCC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGATGCATGCTTATTTTATaGATGCAGAGTAGATTGGTT +
Preference number: 4 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRCMLIL*MQSRLV
Trigger: AACCAATCTACTCTGCATCCATAAAATAAGCATGCA...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATACCAAGGCTAAAAACCTaGTGTCTTAGGTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNIPRLKT*CLRFSL
Trigger: AAGACTAAACCTAAGACACCAGGTTTTTAGCCTTGG...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp AAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCCATTCACCAACTCCTTaGTGTAATCCGGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: KTWCLRFSLYVCLLSIELHSPTP*CNPDQK
Trigger: TTTTTGATCCGGATTACATCAAGGAGTTGGTGAATG...GAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTCCAAACACTTTCGATaGCAAACAAGGAGACACTCT +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKSKHFR*QTRRHS
Trigger: AGAGTGTCTCCTTGTTTGTCATCGAAAGTGTTTGGA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGACACAGGAACATTACTaGGGCAATCAAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKTQEHY*GNQNQQ
Trigger: CTGCTGATTTTGATTGCCTCAGTAATGTTCCTGTGT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACATTATCAAAAGGTTGTaGATTTGTCTCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYIIKRL*ICLSSS
Trigger: GCTGGAAGAGAGACAAATTCACAACCTTTTGATAAT...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp AAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCAACAGTCAGAAAAACTaGAATCCCAAAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KTWCLRFSLYVCLLSIELNSQKN*NPKEQH
Trigger: ATGCTGCTCTTTGGGATTTCAGTTTTTCTGACTGTT...GAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAGGAGGAATGATGTTTTaGGCTCTTGGTCTTCGAATA +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEGGMMF*ALGLRI
Trigger: TATTCGAAGACCAAGAGCTCAAAACATCATTCCTCC...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGAGTTCTAGTTGCCTCTaGCAACTTGACCATATTTCT +
Preference number: 4 (lower is better)
Translates to: WCLRFSLYVCLLSIELELSSSCL*QLDHIS
Trigger: AGAAATATGGTCAAGTTGGCAGAGGCAACTAGAACT...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTATAATACAAAGCTTTTaGCTATCCTTGCTATCAGGT +
Preference number: 4 (lower is better)
Translates to: VPELVHIHTHTCLKGELSIIQSF*LSLLSG
Trigger: ACCTGATAGCAAGGATAGGCAAAAGCTTTGTATTAT...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp TCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGATCTTAATTTCCTTTTTCACTaGATGAGTCCACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: SQTPKFRSQHSGSQNVDLNFLFH*MSPLIP
Trigger: TGGAATCAGTGGACTCATCCAGTGAAAAAGGAAATT...AAGATCCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTACTGGATGGTGTTCGTaGAAGTTTTCGATGAAAGTC +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECTGWCS*KFSMKV
Trigger: GACTTTCATCGAAAACTTCCACGAACACCATCCAGT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TTCTGGTCAGTGATTCAAAGGCAGTTGATTTTAATGGACAGCCATGTACAATTTGAAGTTAATCTGTTCTaGTCAGTGATTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FWSVIQRQLILMDSHVQFEVNLF*SVIQRQ
Trigger: CTGCCTTTGAATCACTGACCAGAACAGATTAACTTC...AAATTGTACATGGCTGTCCATTAAAATCAACTGCCTTTGAATCACTGACCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
3UTR CAA 72 bp CACAGGAACATTACTGAGGCAATCAAAATCAGCAGATaGAATGTGGTCTATGGATTAGATATCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: HRNITEAIKISR*NVVYGLDIMMS
Trigger: TGACATCATGATATCTAATCCATAGACCACATTCAATCTGCTGATTTTGATTGCCTCAGTAATGTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CAA 72 bp ACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTaGAGTGTGAGGACACTTAAAAATAGCATGATACAG +
Preference number: 4 (lower is better)
Translates to: TACLFYGCRVDW*SVRTLKNSMIQ
Trigger: CTGTATCATGCTATTTTTAAGTGTCCTCACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGTGTGAGAGCTGCCTTTaGCATCAATGTTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: WCLRFSLYVCLLSIELELCESCL*HQCFLK
Trigger: TTTAAGAAAACATTGATGTCAAAGGCAGCTCTCACA...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTTTGGAAAACAGCCTTaGTCAACAACACCTATGCTA +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECFGKQP*STTPML
Trigger: TAGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGAATAATGAGGCTTACTaGCCTGTACTCTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKNNEAY*PVLSES
Trigger: TGATTCTGAGAGTACAGGTCAGTAAGCCTCATTATT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTAAAGATGTTCTGGACTaGATGAAACAAGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECKDVLD*MKQEIG
Trigger: CCCTATCTCTTGTTTCATTCAGTCCAGAACATCTTT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCGTCTTAGAAGGTCTTTaGTTTTTAGAAGAATTCGGT +
Preference number: 4 (lower is better)
Translates to: CLRFSLYVCLLSIELELGVLEGL*FLEEFG
Trigger: ACCGAATTCTTCTAAAAAGCAAAGACCTTCTAAGAC...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR GCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCTAACGCATTTTGCTTaGGTTCTGATTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKLTHFA*VLIPQM
Trigger: CATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTAGGTCTTCAAACTGTTaGATTCGTTTTAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECRSSNC*IRFSLG
Trigger: ACCAAGGCTAAAACGAATGCAACAGTTTGAAGACCT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TTCTGGTCAGTGATTCAAAGGCAGTTGATTTTAATGGACAGCCATGTACAATTTATACACACACACACTTaGCTAAAAGGTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: FWSVIQRQLILMDSHVQFIHTHT*LKGELS
Trigger: AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTAT...AAATTGTACATGGCTGTCCATTAAAATCAACTGCCTTTGAATCACTGACCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CCA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACATGAATAGGTGCTCATaGTTGCAAAACAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYMNRCS*LQNNVN
Trigger: ATTCACATTGTTTTGCAACCATGAGCACCTATTCAT...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTACATTGTGTGCATCCTaGCATGACACATTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECTLCAS*HDTFEY
Trigger: ATACTCAAATGTGTCATGCCAGGATGCACACAATGT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR TCA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAATTTGCTTTCACTCTCTaGAGTATGGATATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEFAFTL*SMDIFL
Trigger: AAGGAAGATATCCATACTTCAGAGAGTGAAAGCAAA...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR TCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGGGAGGGAGGAAGAATaGACAAATTATTTAGGATTA +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECGREEE*TNYLGL
Trigger: TAATCCTAAATAATTTGTTCATTCTTCCTCCCTCCC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
3UTR CAA 72 bp ATTAGATATCATGATGTCAATGTCAATCTCCTAAGTTaGATGGTTGTACTATGGTTACGTAGGAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: IRYHDVNVNLLS*MVVLWLRRNAL
Trigger: AAGGGCATTCCTACGTAACCATAGTACAACCATCAAACTTAGGAGATTGACATTGACATCATGATATCTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR GCA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCCACCCATTATAGGTTaGTGTGAACTTGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LHDITFGWAPYIKRELKKPPIIG*CELEIK
Trigger: TTTTATTTCAAGTTCACAGCAACCTATAATGGGTGG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CCA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGATATAACCTTTGGGTaGGCTCCATATATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: YFLNCMLILWMQSRLVECDITFG*APYIKR
Trigger: TCTTTTAATATATGGAGCCCACCCAAAGGTTATATC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp TTGTCTGGGTCTGGCATTGACTTCACCACGAGACCGTGGGGATCGTaGTCTGTGCCAGGAGGCACTGCTGCTGAGGGTGAAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LSGSGIDFTTRPWGS*SVPGGTAAEGEAGF
Trigger: GAAGCCAGCTTCACCCTCAGCAGCAGTGCCTCCTGGCACAGATCACGATCCCCACGGTCTCGTGGTGAAGTCAATGCCAGACCCAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 90 bp GGTCTGGCATTGACTTCACCACGAGACCGTGGGGATCGTGATCTGTaGCAGGAGGCACTGCTGCTGAGGGTGAAGCTGGCTTCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GLALTSPRDRGDRDL*QEALLLRVKLASPH
Trigger: ATGAGGAGAAGCCAGCTTCACCCTCAGCAGCAGTGCCTCCTGGCACAGATCACGATCCCCACGGTCTCGTGGTGAAGTCAATGCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTGTCTGGGTCTGGCATaGACTTCACCACGAGACCGT +
Preference number: 5 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRCLGLA*TSPRDR
Trigger: ACGGTCTCGTGGTGAAGTCAATGCCAGACCCAGACA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGAACACAGAAGCCAGCTaGAAGAGACTCCCAAAAACC +
Preference number: 5 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRNTEAS*KRLPKT
Trigger: GGTTTTTGGGAGTCTCTTCAAGCTGGCTTCTGTGTT...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAGTTGCCTCTGCCAACTaGACCATATTTCTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPVASAN*TIFLVD
Trigger: GTCCACTAGAAATATGGTCAAGTTGGCAGAGGCAAC...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCAGTGGGGGATCTCAATTaGCGAAACTTGTGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPVGDLN*RNLCVR
Trigger: TCTCACACACAAGTTTCGCAAATTGAGATCCCCCAC...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GGACTGGGTGTGATGAGACAGCAGCTGGCATGTCAAGAGGTTGAGGGAGGGAGGTGCAGAGTAGATTGGTaGAGTGTGAGGACACTTAAA +
Preference number: 5 (lower is better)
Translates to: GLGVMRQQLACQEVEGGRCRVDW*SVRTLK
Trigger: TTTAAGTGTCCTCACACTCAACCAATCTACTCTGCA...CCTCCCTCCCTCAACCTCTTGACATGCCAGCTGCTGTCTCATCACACCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp GCCTCTCTCACTGACCTGACTGGCTCTGCATATGGCTTACTGGGTTaGGTGGCATTGATAGAATGGTCCCCACTAATCTGGAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: ASLTDLTGSAYGLLG*VALIEWSPLIWRLV
Trigger: AACAAGCCTCCAGATTAGTGGGGACCATTCTATCAATGCCACTCAACCCAGTAAGCCATATGCAGAGCCAGTCAGGTCAGTGAGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp GGATTCACATCAGGCAAGCCAAGCTCCTCAGAGTCTTCTTTAGGTTaGCCAGTTGCTTGCCCAGGACAAGCTGATGCTTTGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GFTSGKPSSSESSLG*PVACPGQADALSGS
Trigger: AGACCCAGACAAAGCATCAGCTTGTCCTGGGCAAGCAACTGGTCAACCTAAAGAAGACTCTGAGGAGCTTGGCTTGCCTGATGTGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp CCATGCTCAGCTCCTACCCAATTCTCCAATTCCCAAAGTACAAACTaGGTGCAGACAGAAGGAGCTCCAAGAGAGGTCCTTTCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: PCSAPTQFSNSQSTN*VQTEGAPREVLSGP
Trigger: TGGGCCAGAAAGGACCTCTCTTGGAGCTCCTTCTGTCTGCACTCAGTTTGTACTTTGGGAATTGGAGAATTGGGTAGGAGCTGAGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 90 bp GCTCAGCTCCTACCCAATTCTCCAATTCCCAAAGTACAAACTGAGTaGAGACAGAAGGAGCTCCAAGAGAGGTCCTTTCTGGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: AQLLPNSPIPKVQTE*RQKELQERSFLAQG
Trigger: TCCTTGGGCCAGAAAGGACCTCTCTTGGAGCTCCTTCTGTCTGCACTCAGTTTGTACTTTGGGAATTGGAGAATTGGGTAGGAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCACCAAGCGTGCTTGATTaGAATACTCTGCAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAPSVLD*NTLQGR
Trigger: CCTCCCTTGCAGAGTATTCAAATCAAGCACGCTTGG...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 90 bp TCACAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTGCAGATaGTGCATGTGGAAGAGGTTAACTGTTACCTATGGACCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SQRDCKLSAREAACR*CMWKRLTVTYGPRD
Trigger: GTCTCTGGGTCCATAGGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 90 bp GCACTATCACAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAGAGGTTAACTGTTACCTATGGACCC +
Preference number: 5 (lower is better)
Translates to: ALSQRDCKLSAREAA*RCCMWKRLTVTYGP
Trigger: GGGTCCATAGGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTGTGATAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATTGCTAATCCGCCACTaGAAGACAGATGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: IRIILDNTPPTRLPGVLALLIRH*KTDAPL
Trigger: AAGAGGAGCATCTGTCTTCAAGTGGCGGATTAGCAA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATGGATGCAGAGTAGATaGGTTGAGTGTGAGGACACT +
Preference number: 5 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAWMQSR*VECEDT
Trigger: AGTGTCCTCACACTCAACCAATCTACTCTGCATCCA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp TATAAAATGTTGTCCAATGTTGAGGCTGCAGTGTTCTGGGTGCTCTaGCAGGAGCGAGAGGGTAGGAATCTGAAGACCGTCTCTCAGATG +
Preference number: 5 (lower is better)
Translates to: YKMLSNVEAAVFWVL*QEREGRNLKTVSQM
Trigger: CATCTGAGAGACGGTCTTCAGATTCCTACCCTCTCGCTCCTGTCAGAGCACCCAGAACACTGCAGCCTCAACATTGGACAACATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 90 bp CAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTGCAGATGCTaGATGTGGAAGAGGTTAACTGTTACCTATGGACCCAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: QRDCKLSAREAACRC*MWKRLTVTYGPRDK
Trigger: TTTGTCTCTGGGTCCATAGGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 90 bp ATACTCTGCAAGGGAGGAGATGGTGATAGGAGCAGTTGTGGGCCTTaGCCTAATGAGACTTGGTCCAAATATCACCCCCAAGTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: ILCKGGDGDRSSCGP*PNETWSKYHPQVFG
Trigger: TCCAAAAACTTGGGGGTGATATTTGGACCAAGTCTCATTAGGCCAAGGCCCACAACTGCTCCTATCACCATCTCCTCCCTTGCAGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 90 bp CCTTCGAGGTCTTCAAACTGTTGCATTCGTTTTAGCCTTGGTCTCTaGCACATTGGATTCACATCAGGCAAGCCAAGCTCCTCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PSRSSNCCIRFSLGL*HIGFTSGKPSSSES
Trigger: AGACTCTGAGGAGCTTGGCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGCAACAGTTTGAAGACCTCGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 90 bp GCACTATCACAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAGAGGTTAACTGTTACAGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: ALSQRDCKLSAREAA*RCCMWKRLTVTALR
Trigger: CCTTAAAGCTGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTGTGATAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS-3UTR CAA 90 bp CTCAGGACTGACATCACTGGGGTCAAAGATTCAGCTGCCATGGTCCAGGCTCCACATTTCTGCAGCATTTaGAAGATCAACAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: LRTDITGVKDSAAMVQAPHFCSI*KINRIE
Trigger: CTCAATTCTGTTGATCTTCAAAATGCTGCAGAAATG...TGGAGCCTGGACCATGGCAGCTGAATCTTTGACCCCAGTGATGTCAGTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCATTCACATTCAACACCTaGGAACACTACAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAFTFNT*EHYNAF
Trigger: GAAGGCATTGTAGTGTTCCAAGGTGTTGAATGTGAA...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ATACGCATCATCTTGGACAATACGCCTCCCACAAGGCTTCCTGGTGTTCTGGCAGTATGCCTCTCCACATaGTTTGTTGACCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: IRIILDNTPPTRLPGVLAVCLST*FVDLSD
Trigger: ATCTGATAGGTCAACAAACAATGTGGAGAGGCATAC...TGCCAGAACACCAGGAAGCCTTGTGGGAGGCGTATTGTCCAAGATGATGCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AGGAATATAACGTCACCTGTGGCTTCTGGCAGCTGTATCGGACAGCTCAGATCTGGGAGGAATGATGTTTaGAGCTCTTGGTCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: RNITSPVASGSCIGQLRSGRNDV*SSWSSN
Trigger: ATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCC...AGATCTGAGCTGTCCGATACAGCTGCCAGAAGCCACAGGTGACGTTATATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS GCA 90 bp CAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTGCAGATGCTaGATGTGGAAGAGGTTAACTGTTACAGCTTTAAGGGTAAGATCA +
Preference number: 5 (lower is better)
Translates to: QRDCKLSAREAACRC*MWKRLTVTALRVRS
Trigger: TGATCTTACCCTTAAAGCTGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS GCA 90 bp TCACAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTGCAGATaGTGCATGTGGAAGAGGTTAACTGTTACAGCTTTAAGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: SQRDCKLSAREAACR*CMWKRLTVTALRVR
Trigger: TCTTACCCTTAAAGCTGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS-3UTR CAA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGGTGGGGGATCTCAATTaGCGAAACTTGTGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: CLLSIELELGQLPKWVSEVGDLN*RNLCVR
Trigger: TCTCACACACAAGTTTCGCAAATTGAGATCCCCCAC...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp CATGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCCGCAATAATGAATCATaGCCTACATCTCCCATAAGG +
Preference number: 5 (lower is better)
Translates to: HVLTCLSRQSWQTQNFDTRNNES*PTSPIR
Trigger: CCTTATGGGAGATGTAGGCAATGATTCATTATTGCG...GGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp TTCTCAAAATGTGGATCTTCACCAACAGCATCAGCACGACCTGAGAGCCTATTAGTTGCCTCTGCCAACTaGACCATATTTCTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: FSKCGSSPTASARPESLLVASAN*TIFLVD
Trigger: GTCCACTAGAAATATGGTCAAGTTGGCAGAGGCAAC...TAATAGGCTCTCAGGTCGTGCTGATGCTGTTGGTGAAGATCCACATTTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGCTCAATTTGCGAAACTaGTGTGTGAGAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: CLLSIELELGQLPKWVSELNLRN*CVRAAF
Trigger: AAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAG...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS TCA 90 bp CGTGGGGGATCTCAATTTGCGAAACTTGTGTGTGAGAGCTGCCTTTaGCATCAATGTTTTCTTAAATGTTCCAAGGGAATTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: RGGSQFAKLVCESCL*HQCFLKCSKGIGSS
Trigger: ACTGGACCCAATTCCCTTGGAACATTTAAGAAAACATTGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAGATCCCCCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 90 bp TGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTaGCACCAAACTCCTGGCAGATTACCGCTAATTCAACTTGCAAAT +
Preference number: 5 (lower is better)
Translates to: CFNMPFQAVLADAEL*HQTPGRLPLIQLAN
Trigger: ATTTGCAAGTTGAATTAGCGGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp CATGTTTTAACATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTTGACACCGGATCAAAAATAGAGTaGGAACTTAAGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: HVLTCLSRQSWQTQNFDTGSKIE*ELKDLS
Trigger: GCTCAAGTCCTTAAGTTCCAACTCTATTTTTGATCC...GGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATGTTAAAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAAGAGGCTGCACAAATTaGTTAGCCTGGAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: MINPSEMTSSESFGQYASRGCTN*LAWRAA
Trigger: TGCAGCTCTCCAGGCTAACAAATTTGTGCAGCCTCT...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCAAGAGTCTTCTTTAGGTaGACCAGTTGCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: MINPSEMTSSESFGQYASRVFFR*TSCLPR
Trigger: CCTGGGCAAGCAACTGGTCAACCTAAAGAAGACTCT...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGCATTCGTTTTAGCCTaGGTCTCTGACACATTGGAT +
Preference number: 5 (lower is better)
Translates to: NKRGKSNEASLRNTEASLAFVLA*VSDTLD
Trigger: ATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCTTCTCAAGAGATACTaGCCTCAGGGCCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYLLKRY*PQGPRK
Trigger: TTTCCTGGGGCCCTGAGGCAAGTATCTCTTGAGAAG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAACAATACGCATCATCTaGGACAATACGCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRTIRII*DNTPPT
Trigger: TGTGGGAGGCGTATTGTCCAAGATGATGCGTATTGT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp AGGTCTAATCTTGGTCCTTGGAGTATGCCTCTCCACATTGTTTGTTaGCCTATCAGATTTCAGAGAAAGTGGCTTAGGGGTTTTACCATC +
Preference number: 5 (lower is better)
Translates to: RSNLGPWSMPLHIVC*PIRFQRKWLRGFTI
Trigger: GATGGTAAAACCCCTAAGCCACTTTCTCTGAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS GCA 90 bp AGACTGCAGTGGCATGAACTCCTGAATTCCAATGTTAGTTCTAGTTaGCTCTGCCAACTTGACCATATTTCTAGTGGACTCCAATTCCAA +
Preference number: 5 (lower is better)
Translates to: RLQWHELLNSNVSSS*LCQLDHISSGLQFQ
Trigger: TTGGAATTGGAGTCCACTAGAAATATGGTCAAGTTGGCAGAGGCAACTAGAACTAACATTGGAATTCAGGAGTTCATGCCACTGCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGTTGGAACTTAAGGACTaGAGCCCCATTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: NKRGKSNEASLRNTEASLLELKD*SPISEV
Trigger: AACTTCTGAAATGGGGCTCAAGTCCTTAAGTTCCAA...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGACGCAATAATGAATCATaGCCTACATCTCCCATAAGG +
Preference number: 5 (lower is better)
Translates to: LPFEYRTRIGPASQMGFRRNNES*PTSPIR
Trigger: CCTTATGGGAGATGTAGGCAATGATTCATTATTGCG...TCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGACCTGGAGAGCTGCAATaGTTTGTTGTAAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRPGELQ*FVVKGD
Trigger: GTCACCTTTTACAACAAACAATTGCAGCTCTCCAGG...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTTTGCTAATCCGCCACTaGAAGACAGATGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: VPELVHIHTHTCLKGELSLLIRH*KTDAPL
Trigger: AAGAGGAGCATCTGTCTTCAAGTGGCGGATTAGCAA...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGAAATTCACTGTACTCTaGGCCTGGGTCATAGAGTTT +
Preference number: 5 (lower is better)
Translates to: NKRGKSNEASLRNTEASLKFTVL*AWVIEF
Trigger: AAACTCTATGACCCAGGCCAAGAGTACAGTGAATTT...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGGTTGAATTTGTGGCCTaGACAAATTCACTGTACTCT +
Preference number: 5 (lower is better)
Translates to: CLLSIELELGQLPKWVSEVEFVA*TNSLYS
Trigger: AGAGTACAGTGAATTTGTCAAGGCCACAAATTCAAC...CTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCCAAGCGTGCTTGATTaGAATACTCTGCAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGPSVLD*NTLQGR
Trigger: CCTCCCTTGCAGAGTATTCAAATCAAGCACGCTTGG...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAACTTTGGAAAACAGCCTaGATCAACAACACCTATGCT +
Preference number: 5 (lower is better)
Translates to: PFEYRTRIGPASQMGFRELWKTA*INNTYA
Trigger: AGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAAG...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGACCTAACGCATTTTGCTaGCGTTCTGATTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: LPFEYRTRIGPASQMGFRPNAFC*RSDSSN
Trigger: ATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAGG...TCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGACACACGTTTTCCTTaGAGCTGTTCACCAATAAGA +
Preference number: 5 (lower is better)
Translates to: NKRGKSNEASLRNTEASLDTRFP*SCSPIR
Trigger: TCTTATTGGTGAACAGCTCAAAGGAAAACGTGTGTC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATAGTCTCAGGTCTAATCTaGGTCCTTGGAGTATGCCTC +
Preference number: 5 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNIVSGLI*VLGVCL
Trigger: GAGGCATACTCCAAGGACCAAGATTAGACCTGAGAC...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS GCA 90 bp AAGTCATCTACATACAGGCACACTTACAGGTTTAGTCTTTACGTTTaGCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: KSSTYRHTYRFSLYV*LLSIELELGQLPKW
Trigger: CCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTGTAAGTGTGCCTGTATGTAGATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CCA 90 bp GAGGAGGTAACATTTGAACTGCGAGCCGATGTAAGAAAAGCTTCATaGAGATCAATCCAAATGAAAGGAGGAGGTAGTGCAAATGTGAAT +
Preference number: 5 (lower is better)
Translates to: EEVTFELRADVRKAS*RSIQMKGGGSANVN
Trigger: ATTCACATTTGCACTACCTCCTCCTTTCATTTGGATTGATCTCCATGAAGCTTTTCTTACATCGGCTCGCAGTTCAAATGTTACCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS-3UTR CAA 90 bp CCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCAGAGAATTCTTTAACAGCACGTaGTCTAGTTCTAAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: PFEYRTRIGPASQMGFREFFNST*SSSKGE
Trigger: TTCCCCTTTAGAACTAGACAACGTGCTGTTAAAGAA...TTCTCTGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTCATTTGGGGGAGGAATGATGTTTTGAGCTCTTGGTCTTCGAATAGGAATATAGTTGCCTCTGCCAACTaGACCATATTTCTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: FIWGRNDVLSSWSSNRNIVASAN*TIFLVD
Trigger: GTCCACTAGAAATATGGTCAAGTTGGCAGAGGCAAC...TATATTCCTATTCGAAGACCAAGAGCTCAAAACATCATTCCTCCCCCAAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp CATTTCATCAATAATACAAAGCTTTTGCCTATCCTTGCTATCAGGTGCCTGAATAGAGGCTGCACAAATTaGTTAGCCTGGAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: HFINNTKLLPILAIRCLNRGCTN*LAWRAA
Trigger: TGCAGCTCTCCAGGCTAACAAATTTGTGCAGCCTCT...ATTCAGGCACCTGATAGCAAGGATAGGCAAAAGCTTTGTATTATTGATGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAGTGATAACAGAGGCTTaGGAAAACAGCCTTGATCAA +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRVITEA*ENSLDQ
Trigger: TTGATCAAGGCTGTTTTCCAAAGCCTCTGTTATCAC...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAGCCTCTCCACATTGTTaGTTGACCTATCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRASPHC*LTYQIS
Trigger: TGAAATCTGATAGGTCAACAAACAATGTGGAGAGGC...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCTTACAGGTCTAATCTaGGTCCTTGGAGTATGCCTC +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYLTGLI*VLGVCL
Trigger: GAGGCATACTCCAAGGACCAAGATTAGACCTGTAAG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTGGACAAGCTGATGCTTaGTCTGGGTCTGGCATTGAC +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECGQADA*SGSGID
Trigger: GTCAATGCCAGACCCAGACAAAGCATCAGCTTGTCC...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGAACATCCCTACACAAATaGTGGAATTTCACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRTSLHK*WNFTFE
Trigger: CTCGAAGGTGAAATTCCACAATTTGTGTAGGGATGT...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACAATCTATGTAGCACCTaGGCAAAGTTCCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYNLCST*AKFLAH
Trigger: GTGTGCCAGGAACTTTGCCAAGGTGCTACATAGATT...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAAAGTATAGAACTCGAATaGGGCCAGCTTCCCAAATGG +
Preference number: 5 (lower is better)
Translates to: TWCLRFSLYVCLLSIELESIELE*GQLPKW
Trigger: CCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACT...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS TCA 90 bp ATGTCTCTTTCTTCTGGTGATAACAGAGGCTTTGGAAAACAGCCTTaGTCAACAACACCTATGCTACACATAACATCTTGTGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: MSLSSGDNRGFGKQP*STTPMLHITSCGCR
Trigger: CCTACAACCACAAGATGTTATGTGTAGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAAGCCTCTGTTATCACCAGAAGAAAGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS GCA 90 bp CTATCTACAGGCAAACTTACAGGTCTAATCTTGGTCCTTGGAGTATaGCTCTCCACATTGTTTGTTGACCTATCAGATTTCAGAGAAAGT +
Preference number: 5 (lower is better)
Translates to: LSTGKLTGLILVLGV*LSTLFVDLSDFRES
Trigger: ACTTTCTCTGAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGTAAGTTTGCCTGTAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTTTGGAACTTAAGGACTaGAGCCCCATTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: VPELVHIHTHTCLKGELSLELKD*SPISEV
Trigger: AACTTCTGAAATGGGGCTCAAGTCCTTAAGTTCCAA...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp AGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTTTGGAACTTAAGGACTaGAGCCCCATTTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RFSLYVCLLSIELELGQLLELKD*SPISEV
Trigger: AACTTCTGAAATGGGGCTCAAGTCCTTAAGTTCCAA...AAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TACAAACTGGCCAATCCTCCTCAAGTGTCAAGGTCAAAGACAAGTCTGAAAAGATTCTTTAACAGCACGTaGTCTAGTTCTAAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: YKLANPPQVSRSKTSLKRFFNST*SSSKGE
Trigger: TTCCCCTTTAGAACTAGACAACGTGCTGTTAAAGAA...TCTTTTCAGACTTGTCTTTGACCTTGACACTTGAGGAGGATTGGCCAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTCTTTCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGCCTGGAGAGCTGCAATaGTTTGTTGTAAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: FFHKLQNSGLSIVVLKMWPGELQ*FVVKGD
Trigger: GTCACCTTTTACAACAAACAATTGCAGCTCTCCAGG...CCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAACCTGGAGAGCTGCAATaGTTTGTTGTAAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: TWCLRFSLYVCLLSIELEPGELQ*FVVKGD
Trigger: GTCACCTTTTACAACAAACAATTGCAGCTCTCCAGG...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAAGAGGCTGCACAAATTaGTTAGCCTGGAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIERGCTN*LAWRAA
Trigger: TGCAGCTCTCCAGGCTAACAAATTTGTGCAGCCTCT...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGTTGCTAATCCGCCACTaGAAGACAGATGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: WCLRFSLYVCLLSIELELLLIRH*KTDAPL
Trigger: AAGAGGAGCATCTGTCTTCAAGTGGCGGATTAGCAA...CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACTGCTTCTTCTACTTTTaGGAGAGCCTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYCFFYF*ESLLFQ
Trigger: TTGGAAGAGGAGGCTCTCCAAAAAGTAGAAGAAGCA...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATGCTTCTTCTACTTTTaGGAGAGCCTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TWCLRFSLYVCLLSIELECFFYF*ESLLFQ
Trigger: TTGGAAGAGGAGGCTCTCCAAAAAGTAGAAGAAGCA...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCACCTAACGCATTTTGCTaGCGTTCTGATTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: MINPSEMTSSESFGQYASPNAFC*RSDSSN
Trigger: ATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAGG...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AATAAGAGGGGAAAAAGCAATGAGGCATCTCTAAGGAACACAGAAGCCAGCTTGGATCTTTTTAGGCACTaGCATTCAGAAACATTCCTT +
Preference number: 5 (lower is better)
Translates to: NKRGKSNEASLRNTEASLDLFRH*HSETFL
Trigger: AAGGAATGTTTCTGAATGCAAGTGCCTAAAAAGATC...CAAGCTGGCTTCTGTGTTCCTTAGAGATGCCTCATTGCTTTTTCCCCTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp AGAGGACCTCCAGAACTGCAGAAGATTAACAAAAGCTCTAGTGTTTaGGTCACTGCCTGTCAGAGAAAGAGGAAAAAGAATACTACAAAA +
Preference number: 5 (lower is better)
Translates to: RGPPELQKINKSSSV*VTACQRKRKKNTTK
Trigger: TTTTGTAGTATTCTTTTTCCTCTTTCTCTGACAGGCAGTGACTCAAACACTAGAGCTTTTGTTAATCTTCTGCAGTTCTGGAGGTCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 90 bp AGAGCAACAGGAAGCTGGTGGAGCATTTTACACAAAGCTGTAACATaGTCTGATTTATTCTTTAAAATGACACTCTGGCTTCTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RATGSWWSILHKAVT*SDLFFKMTLWLLCG
Trigger: CCCACAAAGAAGCCAGAGTGTCATTTTAAAGAATAAATCAGATCATGTTACAGCTTTGTGTAAAATGCTCCACCAGCTTCCTGTTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 90 bp TTGACTCTGTATGAGCAGTTAGCTCAATGCACTGAACTACGGAACTaGAAGATACTAACGAATATCACATTGCTCAACACATTTCTACCT +
Preference number: 5 (lower is better)
Translates to: LTLYEQLAQCTELRN*KILTNITLLNTFLP
Trigger: AGGTAGAAATGTGTTGAGCAATGTGATATTCGTTAGTATCTTCCAGTTCCGTAGTTCAGTGCATTGAGCTAACTGCTCATACAGAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 90 bp GGCCTAGGTTCACATCCTGACCAATCCAAATTACTTAACCTTCCTTaGATAGTTTCACCATGGGCAAAATGGAAATATTCTGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: GLGSHPDQSKLLNLP*IVSPWAKWKYSGFF
Trigger: AAAGAATCCAGAATATTTCCATTTTGCCCATGGTGAAACTATCCAAGGAAGGTTAAGTAATTTGGATTGGTCAGGATGTGAACCTAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS-3UTR CAA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAAAAATTCACTGTACTCTaGGCCTGGGTCATAGAGTTT +
Preference number: 5 (lower is better)
Translates to: TWCLRFSLYVCLLSIELEKFTVL*AWVIEF
Trigger: AAACTCTATGACCCAGGCCAAGAGTACAGTGAATTT...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTAATGTTCCAAGGGAATaGGGTCCAGTTTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECNVPRE*GPVSEG
Trigger: CCCTTCAGAAACTGGACCCAATTCCCTTGGAACATT...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAAAATGTTCCAAGGGAATaGGGTCCAGTTTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIENVPRE*GPVSEG
Trigger: CCCTTCAGAAACTGGACCCAATTCCCTTGGAACATT...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCTTTGGAAAACAGCCTaGATCAACAACACCTATGCT +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYLWKTA*INNTYA
Trigger: AGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAAG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCGTGATAACAGAGGCTTaGGAAAACAGCCTTGATCAA +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGVITEA*ENSLDQ
Trigger: TTGATCAAGGCTGTTTTCCAAAGCCTCTGTTATCAC...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCATCTCCACATTGTTTGTaGACCTATCAGATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: MINPSEMTSSESFGQYASSPHCL*TYQISE
Trigger: CTCTGAAATCTGATAGGTCAACAAACAATGTGGAGA...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCGCCTCTCCACATTGTTaGTTGACCTATCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGASPHC*LTYQIS
Trigger: TGAAATCTGATAGGTCAACAAACAATGTGGAGAGGC...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCGTATGCCTCTCCACATaGTTTGTTGACCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGVCLST*FVDLSD
Trigger: ATCTGATAGGTCAACAAACAATGTGGAGAGGCATAC...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGAAATGTTGTCCAATGTaGAGGCTGCAGTGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKKCCPM*RLQCSG
Trigger: CCCAGAACACTGCAGCCTCAACATTGGACAACATTT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTTGGTCTCTGACACATaGGATTCACATCAGGCAAGC +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKLVSDT*DSHQAS
Trigger: GCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ATGATCAACCCTTCAGAAATGACTTCTTCTGAGTCGTTTGGACAATACGCATCACCTGATTTTCCCAAATaGCACCTATTAGTTGAGACT +
Preference number: 5 (lower is better)
Translates to: MINPSEMTSSESFGQYASPDFPK*HLLVET
Trigger: AGTCTCAACTAATAGGTGCAATTTGGGAAAATCAGG...TGATGCGTATTGTCCAAACGACTCAGAAGAAGTCATTTCTGAAGGGTTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTCTGACAGCCCTATGTTaGAGATTTGACTCCACCTGT +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECLTALC*RFDSTC
Trigger: ACAGGTGGAGTCAAATCTCAAACATAGGGCTGTCAG...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACCTTCTTCTGAGTCGTTaGGACAATACGCATCATCTT +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYLLLSR*DNTHHL
Trigger: AAGATGATGCGTATTGTCCAAACGACTCAGAAGAAG...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CCA 90 bp GAAAAACACATGCCACAATTGGGGAATGATAATTCATATGATTACTaGTATCTCATGAGAAACTACGGATGCCATAAGGCAGTGGAACAA +
Preference number: 5 (lower is better)
Translates to: EKHMPQLGNDNSYDY*YLMRNYGCHKAVEQ
Trigger: TTGTTCCACTGCCTTATGGCATCCGTAGTTTCTCATGAGATACCAGTAATCATATGAATTATCATTCCCCAATTGTGGCATGTGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 90 bp GGCTTCCAGGCTACAGGTGAATTTAAATATTTTCTGATTGACAATTaGTTGAGTTTGTCTAAAGACCTGGGATTGATAGAAGGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: GFQATGEFKYFLIDN*LSLSKDLGLIEGKG
Trigger: ACCTTTCCCTTCTATCAATCCCAGGTCTTTAGACAAACTCAACCAATTGTCAATCAGAAAATATTTAAATTCACCTGTAGCCTGGAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS-3UTR CAA 90 bp GTGCCTGAATTAGTACACATACACACACACACTTGCCTAAAAGGTGAACTTTCTCATTTCTGCAGCATTTaGAAGATCAACAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: VPELVHIHTHTCLKGELSHFCSI*KINRIE
Trigger: CTCAATTCTGTTGATCTTCAAAATGCTGCAGAAATG...AGAAAGTTCACCTTTTAGGCAAGTGTGTGTGTGTATGTGTACTAATTCAGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCTCAATTTGCGAAACTaGTGTGTGAGAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKLNLRN*CVRAAF
Trigger: AAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCAGCTTTCTGAGGCACATATTTaGAGTATAAAAGGGATACCA +
Preference number: 5 (lower is better)
Translates to: RFSLYVCLLSIELELGQLSEAHI*SIKGIP
Trigger: TGGTATCCCTTTTATACTCAAAATATGTGCCTCAGA...AAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACGTGGTTTATAAAATGTaGTCCAATGTTGAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYVVYKM*SNVEAA
Trigger: TGCAGCCTCAACATTGGACAACATTTTATAAACCAC...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGTGTTGCCCTTTCCTTTaGGTCACGTATCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKCCPFL*VTYLSM
Trigger: CATGGAAAGATACGTGACCAAAAGGAAAGGGCAACA...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CATTTCATCAATAATACAAAGCTTTTGCCTATCCTTGCTATCAGGTGCCTGAATAAAGATCGTTACTTTTaGGAGAGCCTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: HFINNTKLLPILAIRCLNKDRYF*ESLLFQ
Trigger: TTGGAAGAGGAGGCTCTCCAAAAAGTAACGATCTTT...ATTCAGGCACCTGATAGCAAGGATAGGCAAAAGCTTTGTATTATTGATGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp TCACAAACTCCAAAATTCAGGTCTCAGCATAGTGGTTCTCAAAATGTGGATCTTGTGATTCAAAGGCAGTaGATTTTAATGGACAGCCAT +
Preference number: 5 (lower is better)
Translates to: SQTPKFRSQHSGSQNVDLVIQRQ*ILMDSH
Trigger: ATGGCTGTCCATTAAAATCAACTGCCTTTGAATCAC...AAGATCCACATTTTGAGAACCACTATGCTGAGACCTGAATTTTGGAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS TCA 90 bp AATATGCCAGACCCATTCTCAGAGTCTTACATGAATACACTAATTTaGTGTTCACAAAAACCTAGGCTTTGGGTATATTACAGCAAACCG +
Preference number: 5 (lower is better)
Translates to: NMPDPFSESYMNTLI*CSQKPRLWVYYSKP
Trigger: CGGTTTGCTGTAATATACCCAAAGCCTAGGTTTTTGTGAACATCAAATTAGTGTATTCATGTAAGACTCTGAGAATGGGTCTGGCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 90 bp TATATTATCACTATCATCACTTGTACTAACAACAATAGCAGCAGCTaGCAAGTGTGTACAATATGCCAGACCCATTCTCAGAGTCTTACA +
Preference number: 5 (lower is better)
Translates to: YIITIITCTNNNSSS*QVCTICQTHSQSLT
Trigger: TGTAAGACTCTGAGAATGGGTCTGGCATATTGTACACACTTGTCAGCTGCTGCTATTGTTGTTAGTACAAGTGATGATAGTGATAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCCATTTCTGCAGCATTTaGAAGATCAACAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGHFCSI*KINRIE
Trigger: CTCAATTCTGTTGATCTTCAAAATGCTGCAGAAATG...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCGCAATAATGAATCATaGCCTACATCTCCCATAAGG +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKRNNES*PTSPIR
Trigger: CCTTATGGGAGATGTAGGCAATGATTCATTATTGCG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CATTTCATCAATAATACAAAGCTTTTGCCTATCCTTGCTATCAGGTGCCTGAATTTCTTTAACAGCACGTaGTCTAGTTCTAAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: HFINNTKLLPILAIRCLNFFNST*SSSKGE
Trigger: TTCCCCTTTAGAACTAGACAACGTGCTGTTAAAGAA...ATTCAGGCACCTGATAGCAAGGATAGGCAAAAGCTTTGTATTATTGATGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS-3UTR CAA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAATTCACATTCAACACCTaGGAACACTACAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIEFTFNT*EHYNAF
Trigger: GAAGGCATTGTAGTGTTCCAAGGTGTTGAATGTGAA...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACTCTGAGGCACATATTTaGAGTATAAAAGGGATACCA +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYSEAHI*SIKGIP
Trigger: TGGTATCCCTTTTATACTCAAAATATGTGCCTCAGA...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp ACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTCTTCATTTACATGTaGGATCTCTTTTGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TWCLRFSLYVCLLSIELEFFIYM*DLFCKV
Trigger: GACCTTGCAAAAGAGATCCAACATGTAAATGAAGAA...TTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGAATTGGGCTGTCTTAGAAGGTCTTaGCTTTTTAGAAGAATTCGG +
Preference number: 5 (lower is better)
Translates to: CLRFSLYVCLLSIELELGCLRRS*LFRRIR
Trigger: CCGAATTCTTCTAAAAAGCAAAGACCTTCTAAGACA...GCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp GAAACAGATCCGATCACCTATACCTTCTCTCAAATTCCAAATAATGAGGCTTACGCTCGTTCAAAAATTTaGCTTTCACTCTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ETDPITYTFSQIPNNEAYARSKI*LSLSEV
Trigger: TACTTCAGAGAGTGAAAGCAAAATTTTTGAACGAGC...GTAAGCCTCATTATTTGGAATTTGAGAGAAGGTATAGGTGATCGGATCTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCTCTCCACATTGTTTGTaGACCTATCAGATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KTWCLRFSLYVCLLSIELSPHCL*TYQISE
Trigger: CTCTGAAATCTGATAGGTCAACAAACAATGTGGAGA...GAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGGCAAAACCCATGATTaGGCAGTCCTATACAAAAGA +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKGKTHD*AVLYKR
Trigger: TCTTTTGTATAGGACTGCCAAATCATGGGTTTTGCC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGCAAAAGGTTGTGAATTaGTCTCTCTTCCAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKQKVVN*SLFQPD
Trigger: ATCTGGCTGGAAGAGAGACAAATTCACAACCTTTTG...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp TCTTCTGCACGAAACATGGAAGACTTTGCTTTCTCATATTCATCTTaGCGTTGCATGCATAATAATTTTGCCTTTTTGAGAGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SSARNMEDFAFSYSS*RCMHNNFAFLRAFS
Trigger: AGAGAATGCTCTCAAAAAGGCAAAATTATTATGCATGCAACGTCAAGATGAATATGAGAAAGCAAAGTCTTCCATGTTTCGTGCAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS TCA 90 bp ATTGTAGTCTTGGCAGTTAGGCTGTTTTGTTCATACTGTTTGTCCTaGATTTTCTGTAGAGTTTGCTGGTCAAAGCCATTAAATTTGGAA +
Preference number: 5 (lower is better)
Translates to: IVVLAVRLFCSYCLS*IFCRVCWSKPLNLE
Trigger: TTCCAAATTTAATGGCTTTGACCAGCAAACTCTACAGAAAATTCAGGACAAACAGTATGAACAAAACAGCCTAACTGCCAAGACTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 90 bp CATACAGTGAAGCATACAACACTGAATATCACTCTGAACATACTATaGTGCCTGATTTTGCATAAGTCTAGATTAGGGAGAAAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: HTVKHTTLNITLNIL*CLILHKSRLGRKAV
Trigger: AACTGCTTTTCTCCCTAATCTAGACTTATGCAAAATCAGGCATCATAGTATGTTCAGAGTGATATTCAGTGTTGTATGCTTCACTGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGGATCAAAAATAGAGTaGGAACTTAAGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKGSKIE*ELKDLS
Trigger: GCTCAAGTCCTTAAGTTCCAACTCTATTTTTGATCC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGGTTGAATTTGTGGCCTaGACAAATTCACTGTACTCT +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKVEFVA*TNSLYS
Trigger: AGAGTACAGTGAATTTGTCAAGGCCACAAATTCAAC...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp AAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTCGCTCGTTCAAAAATTTaGCTTTCACTCTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: KTWCLRFSLYVCLLSIELARSKI*LSLSEV
Trigger: TACTTCAGAGAGTGAAAGCAAAATTTTTGAACGAGC...GAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS-3UTR CAA 90 bp TTACATGATATAACCTTTGGGTGGGCTCCATATATTAAAAGAGAACTGAAGAAGATGATCATTGTAGTCTaGGCAGTTAGGCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LHDITFGWAPYIKRELKKMIIVV*AVRLFC
Trigger: ACAAAACAGCCTAACTGCCAAGACTACAATGATCAT...CTTCTTCAGTTCTCTTTTAATATATGGAGCCCACCCAAAGGTTATATCATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CCA 90 bp TCCAAATTACTTAACCTTCCTTGGATAGTTTCACCATGGGCAAAATaGAAATATTCTGGATTCTTTGGAATAACACTTGCAAAACTTGTC +
Preference number: 5 (lower is better)
Translates to: SKLLNLPWIVSPWAK*KYSGFFGITLAKLV
Trigger: GACAAGTTTTGCAAGTGTTATTCCAAAGAATCCAGAATATTTCCATTTTGCCCATGGTGAAACTATCCAAGGAAGGTTAAGTAATTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTTCTTCATTTACATGTaGGATCTCTTTTGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECFFIYM*DLFCKV
Trigger: GACCTTGCAAAAGAGATCCAACATGTAAATGAAGAA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTTGTCTTAGAAGGTCTTaGCTTTTTAGAAGAATTCGG +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECCLRRS*LFRRIR
Trigger: CCGAATTCTTCTAAAAAGCAAAGACCTTCTAAGACA...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp TATTTTCTGAACTGCATGCTTATTTTATGGATGCAGAGTAGATTGGTTGAGTGTCAATTAAATACAGATTaGCAAGCCTTCTGGCCATTA +
Preference number: 5 (lower is better)
Translates to: YFLNCMLILWMQSRLVECQLNTD*QAFWPL
Trigger: TAATGGCCAGAAGGCTTGCAAATCTGTATTTAATTG...ACACTCAACCAATCTACTCTGCATCCATAAAATAAGCATGCAGTTCAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS-3UTR CAA 90 bp CTAAAAACCTGGTGTCTTAGGTTTAGTCTTTACGTTTGCCTTTTGAGTATAGAACTTTACGTTTGCCTTTaGAGTATAGAACTCGAATTG +
Preference number: 5 (lower is better)
Translates to: LKTWCLRFSLYVCLLSIELYVCL*SIELEL
Trigger: CAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAG...TTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTAAGACACCAGGTTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS CAA 90 bp CAGTTGCTTGCCCAGGACAAGCTGATGCTTTGTCTGGGTCTGGCATaGACTTCACCACGAGACCGTGGGGATCGTGATCTGTGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: QLLAQDKLMLCLGLA*TSPRDRGDRDLCQE
Trigger: CTCCTGGCACAGATCACGATCCCCACGGTCTCGTGGTGAAGTCAATGCCAGACCCAGACAAAGCATCAGCTTGTCCTGGGCAAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CAA 72 bp GCCCAGGACAAGCTGATGCTTTGTCTGGGTCTGGCATaGACTTCACCACGAGACCGTGGGGATCGTGATCTG +
Preference number: 6 (lower is better)
Translates to: AQDKLMLCLGLA*TSPRDRGDRDL
Trigger: CAGATCACGATCCCCACGGTCTCGTGGTGAAGTCAATGCCAGACCCAGACAAAGCATCAGCTTGTCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 72 bp CTGAAGACCGTCTCTCAGATGCCTCTCTCACTGACCTaGCTGGCTCTGCATATGGCTTACTGGGTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: LKTVSQMPLSLT*LALHMAYWVEW
Trigger: CCACTCAACCCAGTAAGCCATATGCAGAGCCAGTCAGGTCAGTGAGAGAGGCATCTGAGAGACGGTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CCA 72 bp CTGTCTGCAAGGGAAGCAGCCTGCAGATGCTGCATGTaGAAGAGGTTAACTGTTACCTATGGACCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: LSAREAACRCCM*KRLTVTYGPRD
Trigger: GTCTCTGGGTCCATAGGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp TCAGGCAAGCCAAGCTCCTCAGAGTCTTCTTTAGGTTaGCCAGTTGCTTGCCCAGGACAAGCTGATGCTTTG +
Preference number: 6 (lower is better)
Translates to: SGKPSSSESSLG*PVACPGQADAL
Trigger: CAAAGCATCAGCTTGTCCTGGGCAAGCAACTGGTCAACCTAAAGAAGACTCTGAGGAGCTTGGCTTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 72 bp CTATCAGATTCAGGGTCTGGTGTGGGCCCCAATTCCTaGTGCGTAGACTGTTCTTTTCTCTCTGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: LSDSGSGVGPNS*CVDCSFLSVSS
Trigger: TGAGGACACAGAGAGAAAAGAACAGTCTACGCATCAGGAATTGGGGCCCACACCAGACCCTGAATCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 72 bp CAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAGAGGTTAACTGTTACC +
Preference number: 6 (lower is better)
Translates to: QRDCKLSAREAA*RCCMWKRLTVT
Trigger: GGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CAA 72 bp CATGCCTTTCCAGGCAGTCTTGGCAGACGCAGAACTTaGACACCAAACTCCTGGCAGATTACCGCTAATTCA +
Preference number: 6 (lower is better)
Translates to: HAFPGSLGRRRT*TPNSWQITANS
Trigger: TGAATTAGCGGTAATCTGCCAGGAGTTTGGTGTCAAAGTTCTGCGTCTGCCAAGACTGCCTGGAAAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370217.3
CDS GCA 72 bp CAGAGAGACTGTAAACTGTCTGCAAGGGAAGCAGCCTaGAGATGCTGCATGTGGAAGAGGTTAACTGTTACA +
Preference number: 6 (lower is better)
Translates to: QRDCKLSAREAA*RCCMWKRLTVT
Trigger: TGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS CCA 72 bp CTGTCTGCAAGGGAAGCAGCCTGCAGATGCTGCATGTaGAAGAGGTTAACTGTTACAGCTTTAAGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: LSAREAACRCCM*KRLTVTALRVR
Trigger: TCTTACCCTTAAAGCTGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS CAA 90 bp GATACTGATGATGGGAGCATGTGGTTTATAAAATGTTGTCCAATGTaGAGGCTGCAGTGTTCTGGGTGCTCTGACAGGAGCGAGAGGGTA +
Preference number: 6 (lower is better)
Translates to: DTDDGSMWFIKCCPM*RLQCSGCSDRSERV
Trigger: TACCCTCTCGCTCCTGTCAGAGCACCCAGAACACTGCAGCCTCAACATTGGACAACATTTTATAAACCACATGCTCCCATCATCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 72 bp GACTGTAAACTGTCTGCAAGGGAAGCAGCCTGCAGATaGTGCATGTGGAAGAGGTTAACTGTTACAGCTTTA +
Preference number: 6 (lower is better)
Translates to: DCKLSAREAACR*CMWKRLTVTAL
Trigger: TAAAGCTGTAACAGTTAACCTCTTCCACATGCAGCATCTGCAGGCTGCTTCCCTTGCAGACAGTTTACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS GCA 72 bp CTACCCAATTCTCCAATTCCCAAAGTACAAACTGAGTaGAGACAGAAGGAGCTCCAAGAGAGGTCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: LPNSPIPKVQTE*RQKELQERSFL
Trigger: CAGAAAGGACCTCTCTTGGAGCTCCTTCTGTCTGCACTCAGTTTGTACTTTGGGAATTGGAGAATTGGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CAA 72 bp CCTTCACAATCCCTACATTTCGTGGGGGATCTCAATTaGCGAAACTTGTGTGTGAGAGCTGCCTTTGACATC +
Preference number: 6 (lower is better)
Translates to: PSQSLHFVGDLN*RNLCVRAAFDI
Trigger: GATGTCAAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAGATCCCCCACGAAATGTAGGGATTGTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 72 bp ACTGTTGCATTCGTTTTAGCCTTGGTCTCTGACACATaGGATTCACATCAGGCAAGCCAAGCTCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: TVAFVLALVSDT*DSHQASQAPQS
Trigger: ACTCTGAGGAGCTTGGCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGCAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CAA 90 bp GAATTTCACCTTCGAGGTCTTCAAACTGTTGCATTCGTTTTAGCCTaGGTCTCTGACACATTGGATTCACATCAGGCAAGCCAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: EFHLRGLQTVAFVLA*VSDTLDSHQASQAP
Trigger: AGGAGCTTGGCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGCAACAGTTTGAAGACCTCGAAGGTGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 72 bp CTTGGTCCTTGGAGTATGCCTCTCCACATTGTTTGTTaGCCTATCAGATTTCAGAGAAAGTGGCTTAGGGGT +
Preference number: 6 (lower is better)
Translates to: LGPWSMPLHIVC*PIRFQRKWLRG
Trigger: ACCCCTAAGCCACTTTCTCTGAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS TCA 72 bp TCTTCAAACTGTTGCATTCGTTTTAGCCTTGGTCTCTaGCACATTGGATTCACATCAGGCAAGCCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSNCCIRFSLGL*HIGFTSGKPSS
Trigger: GGAGCTTGGCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGCAACAGTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 72 bp CAATCTTATGGGAGCAGCAATGATGGCAGTAGCAGCTaGGGAGATGCCAAAACTCTGATGGAAATCCTTGTT +
Preference number: 6 (lower is better)
Translates to: QSYGSSNDGSSS*GDAKTLMEILV
Trigger: AACAAGGATTTCCATCAGAGTTTTGGCATCTCCTCAGCTGCTACTGCCATCATTGCTGCTCCCATAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 72 bp GACACTCTTCACATTCAACACCTTGGAACACTACAATaGCTTCACAATCCCTACATTTCGTGGGGGATCTCA +
Preference number: 6 (lower is better)
Translates to: DTLHIQHLGTLQ*LHNPYISWGIS
Trigger: TGAGATCCCCCACGAAATGTAGGGATTGTGAAGGCATTGTAGTGTTCCAAGGTGTTGAATGTGAAGAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 72 bp CTTCGAGGTCTTCAAACTGTTGCATTCGTTTTAGCCTaGGTCTCTGACACATTGGATTCACATCAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: LRGLQTVAFVLA*VSDTLDSHQAS
Trigger: GCTTGCCTGATGTGAATCCAATGTGTCAGAGACCAAGGCTAAAACGAATGCAACAGTTTGAAGACCTCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CCA 72 bp CAAATTCACTGTACTCTTGGCCTGGGTCATAGAGTTTaGCACTATCACAGAGAGACTGTAAACTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: QIHCTLGLGHRV*HYHRETVNCLQ
Trigger: TTGCAGACAGTTTACAGTCTCTCTGTGATAGTGCCAAACTCTATGACCCAGGCCAAGAGTACAGTGAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 72 bp TCCCTACATTTCGTGGGGGATCTCAATTTGCGAAACTaGTGTGTGAGAGCTGCCTTTGACATCAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: SLHFVGDLNLRN*CVRAAFDINVF
Trigger: GAAAACATTGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAGATCCCCCACGAAATGTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 90 bp ACTACAATGCCTTCACAATCCCTACATTTCGTGGGGGATCTCAATTaGCGAAACTTGTGTGTGAGAGCTGCCTTTGACATCAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: TTMPSQSLHFVGDLN*RNLCVRAAFDINVF
Trigger: GAAAACATTGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAGATCCCCCACGAAATGTAGGGATTGTGAAGGCATTGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 90 bp AAAGTCTCAGGTCTAATCTTGGTCCTTGGAGTATGCCTCTCCACATaGTTTGTTGACCTATCAGATTTCAGAGAAAGTGGCTTAGGGGTT +
Preference number: 6 (lower is better)
Translates to: KVSGLILVLGVCLST*FVDLSDFRESGLGV
Trigger: AACCCCTAAGCCACTTTCTCTGAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS GCA 72 bp GGCAAACTTACAGGTCTAATCTTGGTCCTTGGAGTATaGCTCTCCACATTGTTTGTTGACCTATCAGATTTC +
Preference number: 6 (lower is better)
Translates to: GKLTGLILVLGV*LSTLFVDLSDF
Trigger: GAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGTAAGTTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS GCA 72 bp CCACTGAGACATGCATCACATTTTCCTAACGCATTTTaGTTGCGTTCTGATTCCTCAAATGATGTAGCTCGT +
Preference number: 6 (lower is better)
Translates to: PLRHASHFPNAF*LRSDSSNDVAR
Trigger: ACGAGCTACATCATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAGGAAAATGTGATGCATGTCTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 72 bp ACATTTGAACTGCGAGCCGATGTAAGAAAAGCTTCATaGAGATCAATCCAAATGAAAGGAGGAGGTAGTGCA +
Preference number: 6 (lower is better)
Translates to: TFELRADVRKAS*RSIQMKGGGSA
Trigger: TGCACTACCTCCTCCTTTCATTTGGATTGATCTCCATGAAGCTTTTCTTACATCGGCTCGCAGTTCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CAA 90 bp AAACTTACAGGTCTAATCTTGGTCCTTGGAGTATGCCTCTCCACATaGTTTGTTGACCTATCAGATTTCAGAGAAAGTGGCTTAGGGGTT +
Preference number: 6 (lower is better)
Translates to: KLTGLILVLGVCLST*FVDLSDFRESGLGV
Trigger: AACCCCTAAGCCACTTTCTCTGAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CAA 90 bp CTTGCAAGAAGTAGTCTATCTACAGGCAAACTTACAGGTCTAATCTaGGTCCTTGGAGTATGCCTCTCCACATTGTTTGTTGACCTATCA +
Preference number: 6 (lower is better)
Translates to: LARSSLSTGKLTGLI*VLGVCLSTLFVDLS
Trigger: TGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGTAAGTTTGCCTGTAGATAGACTACTTCTTGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CAA 90 bp TCTACATACAGGCACACTTACAGGTTTAGTCTTTACGTTTGCCTTTaGAGTATAGAACTCGAATTGGGCCAGCTTCCCAAATGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: STYRHTYRFSLYVCL*SIELELGQLPKWVS
Trigger: TGAAACCCATTTGGGAAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTGTAAGTGTGCCTGTATGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS TCA 72 bp CAGCTGGTTCATAATTTTAGGAGATGGATGTGTTTCTaGGGATCCTCATCTCTATATCCTGATGGTCTGATC +
Preference number: 6 (lower is better)
Translates to: QLVHNFRRWMCF*GSSSLYPDGLI
Trigger: GATCAGACCATCAGGATATAGAGATGAGGATCCTCAGAAACACATCCATCTCCTAAAATTATGAACCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 72 bp TCACTGAGACATGCATCACATTTTCCTAACGCATTTTaGTTGCGTTCTGATTCCTCAAATGATGTAGCTCGT +
Preference number: 6 (lower is better)
Translates to: SLRHASHFPNAF*LRSDSSNDVAR
Trigger: ACGAGCTACATCATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAGGAAAATGTGATGCATGTCTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260526.11
ENST00000552844.5
CDS GCA 72 bp ACATACAGGCACACTTACAGGTTTAGTCTTTACGTTTaGCTTTTGAGTATAGAACTCGAATTGGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: TYRHTYRFSLYV*LLSIELELGQL
Trigger: AAGCTGGCCCAATTCGAGTTCTATACTCAAAAGGCAAACGTAAAGACTAAACCTGTAAGTGTGCCTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CCA 72 bp GCTTGTCATGCTCAAGAAAGAGATGAAAGGTCAATATaGTTGAAGTATATGGAAAGAGCTGGAGCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: ACHAQERDERSI*LKYMERAGALV
Trigger: AACCAGAGCTCCAGCTCTTTCCATATACTTCAACCATATTGACCTTTCATCTCTTTCTTGAGCATGACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CAA 72 bp GTTCAATGTCTCTTTCTTCTGGTGATAACAGAGGCTTaGGAAAACAGCCTTGATCAACAACACCTATGCTAC +
Preference number: 6 (lower is better)
Translates to: VQCLFLLVITEA*ENSLDQQHLCY
Trigger: GTAGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAAGCCTCTGTTATCACCAGAAGAAAGAGACATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 72 bp CTGAGACATGCATCACATTTTCCTAACGCATTTTGCTaGCGTTCTGATTCCTCAAATGATGTAGCTCGTTCA +
Preference number: 6 (lower is better)
Translates to: LRHASHFPNAFC*RSDSSNDVARS
Trigger: TGAACGAGCTACATCATTTGAGGAATCAGAACGCAAGCAAAATGCGTTAGGAAAATGTGATGCATGTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 72 bp AGTAGTCTATCTACAGGCAAACTTACAGGTCTAATCTaGGTCCTTGGAGTATGCCTCTCCACATTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: SSLSTGKLTGLI*VLGVCLSTLFV
Trigger: AACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGTAAGTTTGCCTGTAGATAGACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS CAA 90 bp CCTTCACAATCCCTACATTTCGTGGGGGATCTCAATTTGCGAAACTaGTGTGTGAGAGCTGCCTTTGACATCAATGTTTTCTTAAATGTT +
Preference number: 6 (lower is better)
Translates to: PSQSLHFVGDLNLRN*CVRAAFDINVFLNV
Trigger: AACATTTAAGAAAACATTGATGTCAAAGGCAGCTCTCACACACAAGTTTCGCAAATTGAGATCCCCCACGAAATGTAGGGATTGTGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 72 bp TCTTCTGGTGATAACAGAGGCTTTGGAAAACAGCCTTaGTCAACAACACCTATGCTACACATAACATCTTGT +
Preference number: 6 (lower is better)
Translates to: SSGDNRGFGKQP*STTPMLHITSC
Trigger: ACAAGATGTTATGTGTAGCATAGGTGTTGTTGATCAAGGCTGTTTTCCAAAGCCTCTGTTATCACCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 72 bp CCAGAACTGCAGAAGATTAACAAAAGCTCTAGTGTTTaGGTCACTGCCTGTCAGAGAAAGAGGAAAAAGAAT +
Preference number: 6 (lower is better)
Translates to: PELQKINKSSSV*VTACQRKRKKN
Trigger: ATTCTTTTTCCTCTTTCTCTGACAGGCAGTGACTCAAACACTAGAGCTTTTGTTAATCTTCTGCAGTTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp AGTAATGGCAATATGACTGGTCCAAGGACCGCATCTTaGGAAGGCTTTCTAAACTTTAGTTTTCTCATCAGT +
Preference number: 6 (lower is better)
Translates to: SNGNMTGPRTAS*EGFLNFSFLIS
Trigger: ACTGATGAGAAAACTAAAGTTTAGAAAGCCTTCTCAAGATGCGGTCCTTGGACCAGTCATATTGCCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp TGTCCAAATGTAGATTATGGTTCTAAGGATCTGTGTTaGAACCCAAGATTCTGCATTCCTCATAGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: CPNVDYGSKDLC*NPRFCIPHRLS
Trigger: TGAGAGCCTATGAGGAATGCAGAATCTTGGGTTTCAACACAGATCCTTAGAACCATAATCTACATTTGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp ATGGATGTGTTTCTGAGGATCCTCATCTCTATATCCTaGTGGTCTGATCACAACTGCCTAAGAGAAAAACAT +
Preference number: 6 (lower is better)
Translates to: MDVFLRILISIS*WSDHNCLREKH
Trigger: ATGTTTTTCTCTTAGGCAGTTGTGATCAGACCATCAGGATATAGAGATGAGGATCCTCAGAAACACATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS GCA 72 bp ATTAAAGTCTCAGGTCTAATCTTGGTCCTTGGAGTATaGCTCTCCACATTGTTTGTTGACCTATCAGATTTC +
Preference number: 6 (lower is better)
Translates to: IKVSGLILVLGV*LSTLFVDLSDF
Trigger: GAAATCTGATAGGTCAACAAACAATGTGGAGAGGCATACTCCAAGGACCAAGATTAGACCTGAGACTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552844.5
CDS CCA 72 bp TATGAGCAGTTAGCTCAATGCACTGAACTACGGAACTaGAAGATACTAACGAATATCACATTGCTCAACACA +
Preference number: 6 (lower is better)
Translates to: YEQLAQCTELRN*KILTNITLLNT
Trigger: TGTGTTGAGCAATGTGATATTCGTTAGTATCTTCCAGTTCCGTAGTTCAGTGCATTGAGCTAACTGCTCATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CAA 72 bp GTTTCTCGAGAAACAGGCAGTCGCAATAATGAATCATaGCCTACATCTCCCATAAGGAAGTTTGTAAGGATA +
Preference number: 6 (lower is better)
Translates to: VSRETGSRNNES*PTSPIRKFVRI
Trigger: TATCCTTACAAACTTCCTTATGGGAGATGTAGGCAATGATTCATTATTGCGACTGCCTGTTTCTCGAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS CAA 72 bp ATGACAAACAAGGAGACACTCTTCACATTCAACACCTaGGAACACTACAATGCCTTCACAATCCCTACATTT +
Preference number: 6 (lower is better)
Translates to: MTNKETLFTFNT*EHYNAFTIPTF
Trigger: AAATGTAGGGATTGTGAAGGCATTGTAGTGTTCCAAGGTGTTGAATGTGAAGAGTGTCTCCTTGTTTGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 90 bp AACGACTTAGTTTCTCGAGAAACAGGCAGTCGCAATAATGAATCATaGCCTACATCTCCCATAAGGAAGTTTGTAAGGATATTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: NDLVSRETGSRNNES*PTSPIRKFVRIFPK
Trigger: CTTTGGAAATATCCTTACAAACTTCCTTATGGGAGATGTAGGCAATGATTCATTATTGCGACTGCCTGTTTCTCGAGAAACTAAGTCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS CAA 90 bp CACTTGAAGACAGATGCTCCTCTTCTGCACGAAACATGGAAGACTTaGCTTTCTCATATTCATCTTGACGTTGCATGCATAATAATTTTG +
Preference number: 6 (lower is better)
Translates to: HLKTDAPLLHETWKT*LSHIHLDVACIIIL
Trigger: CAAAATTATTATGCATGCAACGTCAAGATGAATATGAGAAAGCAAAGTCTTCCATGTTTCGTGCAGAAGAGGAGCATCTGTCTTCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS CAA 90 bp CTGTATGGGAGAATGGGGATAACCAAAGGAAAAGAGACTGTGAACTaGAAGACAGATCAACAGAACACTATAAACAACCAAGAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: LYGRMGITKGKETVN*KTDQQNTINNQEEK
Trigger: TTTTTCCTCTTGGTTGTTTATAGTGTTCTGTTGATCTGTCTTCAAGTTCACAGTCTCTTTTCCTTTGGTTATCCCCATTCTCCCATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp AGTGCTCTCAGAATCACTAAACATCCCAAATGTCCATaGTCTTATAAAGGAAGGACCTGTTATATCTGCACT +
Preference number: 6 (lower is better)
Translates to: SALRITKHPKCP*SYKGRTCYICT
Trigger: AGTGCAGATATAACAGGTCCTTCCTTTATAAGATCATGGACATTTGGGATGTTTAGTGATTCTGAGAGCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 72 bp TTGGCAGTTAGGCTGTTTTGTTCATACTGTTTGTCCTaGATTTTCTGTAGAGTTTGCTGGTCAAAGCCATTA +
Preference number: 6 (lower is better)
Translates to: LAVRLFCSYCLS*IFCRVCWSKPL
Trigger: TAATGGCTTTGACCAGCAAACTCTACAGAAAATTCAGGACAAACAGTATGAACAAAACAGCCTAACTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260526.11
CDS TCA 72 bp CTCGCAAGACAAAAGACAATAAAAAGACACCAACCCTaGTACAGCTCAGATTTGGGACGATTAGATGAAAAA +
Preference number: 6 (lower is better)
Translates to: LARQKTIKRHQP*YSSDLGRLDEK
Trigger: TTTTTCATCTAATCGTCCCAAATCTGAGCTGTATCAGGGTTGGTGTCTTTTTATTGTCTTTTGTCTTGCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS TCA 72 bp AGGCTTATAAAATGCCATTGCATGTTTGGGCTACAATaGTCTCAGTACTCTGAAAGCAGTACAAGAATTTGG +
Preference number: 6 (lower is better)
Translates to: RLIKCHCMFGLQ*SQYSESSTRIW
Trigger: CCAAATTCTTGTACTGCTTTCAGAGTACTGAGATCATTGTAGCCCAAACATGCAATGGCATTTTATAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS GCA 72 bp GGTAAACTGCTTACTCTCTTGATCCTAAAGGTAACTTaGACGCTAGGTGACCTTCATCAAGTTATTTATAAT +
Preference number: 6 (lower is better)
Translates to: GKLLTLLILKVT*TLGDLHQVIYN
Trigger: ATTATAAATAACTTGATGAAGGTCACCTAGCGTGCAAGTTACCTTTAGGATCAAGAGAGTAAGCAGTTTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 72 bp CTTAACCTTCCTTGGATAGTTTCACCATGGGCAAAATaGAAATATTCTGGATTCTTTGGAATAACACTTGCA +
Preference number: 6 (lower is better)
Translates to: LNLPWIVSPWAK*KYSGFFGITLA
Trigger: TGCAAGTGTTATTCCAAAGAATCCAGAATATTTCCATTTTGCCCATGGTGAAACTATCCAAGGAAGGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CCA 72 bp TCACATCCTGACCAATCCAAATTACTTAACCTTCCTTaGATAGTTTCACCATGGGCAAAATGGAAATATTCT +
Preference number: 6 (lower is better)
Translates to: SHPDQSKLLNLP*IVSPWAKWKYS
Trigger: AGAATATTTCCATTTTGCCCATGGTGAAACTATCCAAGGAAGGTTAAGTAATTTGGATTGGTCAGGATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CAA 90 bp TCTTCATTTACATGTTGGATCTCTTTTGCAAGGTCTATAAATTCCTaGTACAATCGAAATAAAATAAATGGTTCTGGGAGCTGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: SSFTCWISFARSINS*YNRNKINGSGSCRR
Trigger: CCTTCGGCAGCTCCCAGAACCATTTATTTTATTTCGATTGTACAAGGAATTTATAGACCTTGCAAAAGAGATCCAACATGTAAATGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS CAA 90 bp TTCCAGGCTACAGGTGAATTTAAATATTTTCTGATTGACAATTGGTaGAGTTTGTCTAAAGACCTGGGATTGATAGAAGGGAAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: FQATGEFKYFLIDNW*SLSKDLGLIEGKGS
Trigger: TGAACCTTTCCCTTCTATCAATCCCAGGTCTTTAGACAAACTCAACCAATTGTCAATCAGAAAATATTTAAATTCACCTGTAGCCTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CAA 90 bp GAAGTTCACAGCTTTCACTTTTGCAGTGAGCATTTCTGCAGCATTTaGAAGATCAACAGAATTGAGGTTCTGATGTTTATTCATTATAGA +
Preference number: 6 (lower is better)
Translates to: EVHSFHFCSEHFCSI*KINRIEVLMFIHYR
Trigger: TCTATAATGAATAAACATCAGAACCTCAATTCTGTTGATCTTCAAAATGCTGCAGAAATGCTCACTGCAAAAGTGAAAGCTGTGAACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000370217.3
ENST00000552844.5
CDS CAA 90 bp TGCTTGCGTTCTGATTCCTCAAATGATGTAGCTCGTTCAAAAATTTaGCTTTCACTCTCTGAAGTATGGATATCTTCCTTTGAAGAAAAA +
Preference number: 6 (lower is better)
Translates to: CLRSDSSNDVARSKI*LSLSEVWISSFEEK
Trigger: TTTTTCTTCAAAGGAAGATATCCATACTTCAGAGAGTGAAAGCAAAATTTTTGAACGAGCTACATCATTTGAGGAATCAGAACGCAAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5
CDS TCA 72 bp AAGCATACAACACTGAATATCACTCTGAACATACTATaGTGCCTGATTTTGCATAAGTCTAGATTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: KHTTLNITLNIL*CLILHKSRLGR
Trigger: TCTCCCTAATCTAGACTTATGCAAAATCAGGCATCATAGTATGTTCAGAGTGATATTCAGTGTTGTATGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482481.1
CDS CCA 72 bp TCCAAATTACTTAACCTTCCTTGGATAGTTTCACCATaGGCAAAATGGAAATATTCTGGATTCTTTGGAATA +
Preference number: 6 (lower is better)
Translates to: SKLLNLPWIVSP*AKWKYSGFFGI
Trigger: TATTCCAAAGAATCCAGAATATTTCCATTTTGCCCATGGTGAAACTATCCAAGGAAGGTTAAGTAATTTGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546444.1
CDS CAA 72 bp TCTGATTCCTCAAATGATGTAGCTCGTTCAAAAATTTaGCTTTCACTCTCTGAAGTATGGATATCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SDSSNDVARSKI*LSLSEVWISSF
Trigger: AAAGGAAGATATCCATACTTCAGAGAGTGAAAGCAAAATTTTTGAACGAGCTACATCATTTGAGGAATCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260526.11
ENST00000482481.1
ENST00000552844.5