RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP28 (Homo sapiens)

Ensembl gene IDs: ENSG00000088756

Ensembl transcript IDs: ENST00000262227.7, ENST00000314319.7, ENST00000383472.9, ENST00000419673.6, ENST00000531294.5, ENST00000532723.5, ENST00000532996.5, ENST00000577524.5, ENST00000579245.1, ENST00000579689.1, ENST00000579796.1, ENST00000581099.5, ENST00000583410.1, ENST00000584287.5, ENST00000584387.1

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGACAGTGGTCATCTTACCAGACATGC +
Preference number: 1 (lower is better)
Translates to: WGLCVLGNHRSGKWL*RLLIVRQWSSYQTC
Trigger: GCATGTCTGGTAAGATGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR CCA 90 bp GAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATAGTGAGACAGTGGTCATCTTACCAG +
Preference number: 1 (lower is better)
Translates to: ETWGLCVLGNHRSGK*LCRLLIVRQWSSYQ
Trigger: CTGGTAAGATGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR GCA 90 bp GTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACA +
Preference number: 1 (lower is better)
Translates to: VELVNRRLFHSSCLQ*PLLRARNTENAVGT
Trigger: TGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATaGTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCT +
Preference number: 1 (lower is better)
Translates to: KASVELVNRRLFHSS*LQCPLLRARNTENA
Trigger: AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
3UTR-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLSSCLQ*PLLRAR
Trigger: TCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCCCGTGCCTGGCACTTaGAAAGATACTGAGCATCAT +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLPVPGT*KDTEHH
Trigger: ATGATGCTCAGTATCTTTCCAAGTGCCAGGCACGGG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp TTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 2 (lower is better)
Translates to: LSHSELAVQAPVIHWNELPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...CAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
3UTR-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTTCAGTTGAATTGGTaGACCGGCGCCTCTTCCATA +
Preference number: 2 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALQLNW*TGASSI
Trigger: TATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTTGGGACTGCAGAAGTaGCTGTCTATAGTTGTGAAA +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLLGLQK*LSIVVK
Trigger: TTTCACAACTATAGACAGTCACTTCTGCAGTCCCAA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp CTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGCTCCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 2 (lower is better)
Translates to: LFQKIIITYRILNWLSRLPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...GAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577524.5
3UTR-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATACAATGCCCACTGCTaGGGGCCAGAAATACTGAGA +
Preference number: 2 (lower is better)
Translates to: DSGHLTRHASDFKPQANPYNAHC*GPEILR
Trigger: TCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGATTGGTCTTTCTTCTaGAAGGACCACATCATCTTT +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLDWSFF*KDHIIF
Trigger: AAAGATGATGTGGTCCTTCCAGAAGAAAGACCAATC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGATTTTCCACAGTCGATaGTGGAGAAAAGTTCATTTG +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLIFHSR*WRKVHL
Trigger: CAAATGAACTTTTCTCCATCATCGACTGTGGAAAAT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAGATCTGGATTATTTTaGAGGGTAGAAATGAAGGCT +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLRSGLF*RVEMKA
Trigger: AGCCTTCATTTCTACCCTGCAAAATAATCCAGATCT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTCTGCATTTTTAAATTaGGACTGCAGAAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLSAFLN*DCRSDC
Trigger: ACAGTCACTTCTGCAGTCCCAATTTAAAAATGCAGA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTGGATAAAGCAGTTCTaGATTTTTAAATTGGGACTG +
Preference number: 2 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLWIKQF*IFKLGL
Trigger: CAGTCCCAATTTAAAAATGCAGAACTGCTTTATCCA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCAGGCTAATCCACAATaGTCGGCCATGCCTATGATT +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRAQANPQ*SAMPMI
Trigger: AATCATAGGCATGGCCGAGCATTGTGGATTAGCCTG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATA +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRAHRSGK*LCRLLI
Trigger: TATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGA +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRASGKWL*RLLIVR
Trigger: TCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGATTGGTCTTTCTTCTaGAAGGACCACATCATCTTT +
Preference number: 2 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMADWSFF*KDHIIF
Trigger: AAAGATGATGTGGTCCTTCCAGAAGAAAGACCAATC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGGAGAAAAGTTCATTTaGACCAGAATGCTGATAGTC +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRAGEKFI*TRMLIV
Trigger: GACTATCAGCATTCTGGTGCAAATGAACTTTTCTCC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTTAGAAAGCAGATCTaGATTATTTTGCAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: DSGHLTRHASDFKPQANPFRKQI*IILQGR
Trigger: TCTACCCTGCAAAATAATCCAGATCTGCTTTCTAAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTCTGCATTTTTAAATTaGGACTGCAGAAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRASAFLN*DCRSDC
Trigger: ACAGTCACTTCTGCAGTCCCAATTTAAAAATGCAGA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTTTAGAAAGCAGATCTaGATTATTTTGCAGGGTAGA +
Preference number: 2 (lower is better)
Translates to: FPANLRRTISIVSRKVRAFRKQI*IILQGR
Trigger: TCTACCCTGCAAAATAATCCAGATCTGCTTTCTAAA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR GCA 72 bp GTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGAAATACTGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: VNRRLFHSSCLQ*PLLRARNTENA
Trigger: AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
3UTR GCA 72 bp GTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATaGTTACAATGCCCACTGCTGAGGGCCAGAAATACT +
Preference number: 3 (lower is better)
Translates to: VELVNRRLFHSS*LQCPLLRARNT
Trigger: AGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
3UTR CCA 72 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATAGTGAGACAGTGGTCA +
Preference number: 3 (lower is better)
Translates to: GLCVLGNHRSGK*LCRLLIVRQWS
Trigger: TGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR GCA 72 bp TGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGACAGTGGTCATCTTAC +
Preference number: 3 (lower is better)
Translates to: CVLGNHRSGKWL*RLLIVRQWSSY
Trigger: GTAAGATGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTCTCTTTCACCTCTTTaGTTTCGTAGCATTGGCTAC +
Preference number: 3 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLSLSPL*FRSIGY
Trigger: GTAGCCAATGCTACGAAACAAAAGAGGTGAAAGAGA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTGGAGAAAAGTTCATTaGCACCAGAATGCTGATAGT +
Preference number: 3 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLWRKVH*HQNADS
Trigger: ACTATCAGCATTCTGGTGCAAATGAACTTTTCTCCA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR TCA 72 bp TTCTTTTCCAGAAAATCATCATCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCCGGTGATCCATTGGAA +
Preference number: 3 (lower is better)
Translates to: FFSRKSSSLIAF*TGCPGSGDPLE
Trigger: TTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577524.5
3UTR-3UTR CAA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTCTCTTTCACCTCTTTaGTTTCGTAGCATTGGCTAC +
Preference number: 3 (lower is better)
Translates to: FPANLRRTISIVSRKVRASLSPL*FRSIGY
Trigger: GTAGCCAATGCTACGAAACAAAAGAGGTGAAAGAGA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR GCA 72 bp CATGCATCTGATTTTAAGCCTCAGGCTAATCCACAATaGTCGGCCATGCCTATGATTAACAAACAAAAGCAA +
Preference number: 3 (lower is better)
Translates to: HASDFKPQANPQ*SAMPMINKQKQ
Trigger: TTGCTTTTGTTTGTTAATCATAGGCATGGCCGAGCATTGTGGATTAGCCTGAGGCTTAAAATCAGATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAGACCGGGACCAGCATaGACCGGCGCGCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTERPGPA*TGAPGG
Trigger: GCCTCCCGGCGCGCCGGTCCATGCTGGTCCCGGTCT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGAATGGATTTTCTGCTaGGCGGGTGGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLEWIFC*AGGWLR
Trigger: CCGCAGCCAGCCACCCGCTCAGCAGAAAATCCATTC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTTTCTGCTGAGCGGGTaGCTGGCTGCGGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENFLLSG*LAAARG
Trigger: GCCCCGCGCCGCAGCCAGCCACCCGCTCAGCAGAAA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLLSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAACTGCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: SELAVQAPVIHWNELVELLSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAGGTGTGACCTCAGCTaGCGGTGGCTCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTERCDLS*RWLFLP
Trigger: GGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTTCATCCACAGGTGTaGCCTCAGCTGGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALHPQV*PQLAVA
Trigger: AGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR TCA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFLSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGAGCATGGACCCGTATaGCTCCTTCCGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLEHGPV*LLPARQ
Trigger: CTGACGTGCCGGAAGGAGTCATACGGGTCCATGCTC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGAGCATGGACCCGTATaGCTCCTTCCGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAEHGPV*LLPARQ
Trigger: CTGACGTGCCGGAAGGAGTCATACGGGTCCATGCTC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGAGAGAAGTGGAGCATaGACCCGTATGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLERSGA*TRMTPS
Trigger: GGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTGGCCATGGACACCTTaGAGAGAAGTGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLWPWTP*REVEHG
Trigger: TCCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGGGCAATCACAGGTCTaGAAAATGGCTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLGQSQV*KMALQA
Trigger: AGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTCTACGGAGGCTTCTaGGTTGGAACGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAVYGGF*VGTAEG
Trigger: GCCTTCAGCCGTTCCAACTCAGAAGCCTCCGTAGAC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR TCA 90 bp TTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGTCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSHSELAVQAPVIHWNELSLIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGA...CAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTACAATGCCCACTGCTaGGGGCCAGAAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLYNAHC*GPEILR
Trigger: TCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAGGCGGTGGCTCTTCTTaGCCTCCCATGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPGGGSS*PPMLLS
Trigger: AGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCC...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR GCA 90 bp TCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAACTGCTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SELAVQAPVIHWNELVELLLHGS*LGSSQC
Trigger: ACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAG...CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCATGAGGGCCTGAGCTaGATCTCTGTTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEHEGLS*ISVGIR
Trigger: CCTGATGCCAACAGAGATGCAGCTCAGGCCCTCATG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTESLIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCTTGAAACTGTACTTTaGCGTGAGGCCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLLETVL*REALFP
Trigger: TGGAAAGAGGGCCTCACGTCAAAGTACAGTTTCAAG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCATGAGGGCCTGAGCTaGATCTCTGTTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAHEGLS*ISVGIR
Trigger: CCTGATGCCAACAGAGATGCAGCTCAGGCCCTCATG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCAGGCTAATCCACAATaGTCGGCCATGCCTATGATT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLQANPQ*SAMPMI
Trigger: AATCATAGGCATGGCCGAGCATTGTGGATTAGCCTG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTGAAGGCAGGAGGATaGAGGGATTCATTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELKAGG*RDSLES
Trigger: GCTCTCCAATGAATCCCTCCATCCTCCTGCCTTCAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGCCAGAAATCCTCCATaGAGGCGCTGTCTACGGAGG +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQARNPP*RRCLRR
Trigger: CCTCCGTAGACAGCGCCTCCATGGAGGATTTCTGGC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGACCTCAGCTGGCGGTaGCTCTTCTTGCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRADLSWR*LFLPSH
Trigger: ATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMACTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLCTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAAAATCATCATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: ENHHLSHSELAVQAPVIHCTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...ATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATGATGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR CCA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTCTCCCTTCTTTATCCTaGGATGCGTCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFLPSLS*DASDRV
Trigger: TACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAG...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLHRSGK*LCRLLI
Trigger: TATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
3UTR CAA 72 bp GGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTaGATAGTGAGACAGTGGTCATCTTACCAGACATGC +
Preference number: 4 (lower is better)
Translates to: GNHRSGKWLCRL*IVRQWSSYQTC
Trigger: GCATGTCTGGTAAGATGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENLSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAACTGTACTTTGACGTaGGGCCCTCTTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLNCTLT*GPLSIR
Trigger: TCTAATGGAAAGAGGGCCTCACGTCAAAGTACAGTT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAATGTCATGAGGGCCTaGGCTGCATCTCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMANVMRA*AASLLA
Trigger: TGCCAACAGAGATGCAGCTCAGGCCCTCATGACATT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAAATGTCATGAGGGCCTaGGCTGCATCTCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLNVMRA*AASLLA
Trigger: TGCCAACAGAGATGCAGCTCAGGCCCTCATGACATT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTAATGTCATGAGGGCCTaGGCTGCATCTCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENANVMRA*AASLLA
Trigger: TGCCAACAGAGATGCAGCTCAGGCCCTCATGACATT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTTCAGTTGAATTGGTaGACCGGCGCCTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELQLNW*TGASSI
Trigger: TATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAATCATTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLSHSELAVQAPVIHWNESFIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAATGA...TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR GCA 90 bp CATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAATGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: HSELAVQAPVIHWNELVEWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...TTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELLHGS*LGSSQC
Trigger: ACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR GCA 90 bp ACTGGAATGGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TGMVSSIATESLLGTAKLVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...GAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACCATTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACATGAGGGCCTGAGCTaGATCTCTGTTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPHEGLS*ISVGIR
Trigger: CCTGATGCCAACAGAGATGCAGCTCAGGCCCTCATG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQCTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENCTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGAGAGAAGCATCATCTaGCATGGAACCACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLERSII*HGTTCL
Trigger: AAGACAAGTGGTTCCATGCCAGATGATGCTTCTCTC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTCCCTTCTTTATCCTaGGATGCGTCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: HLSHSELAVQAPVIHWNELPSLS*DASDRV
Trigger: TACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAG...TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGAGAGAAGTGGAGCATaGACCCGTATGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLERSGA*TRMTPS
Trigger: GGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATGGCCATGGACACCTTaGAGAGAAGTGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLWPWTP*REVEHG
Trigger: TCCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGGGCAATCACAGGTCTaGAAAATGGCTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLGQSQV*KMALQA
Trigger: AGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGGGCAATCACAGGTCTaGAAAATGGCTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAGQSQV*KMALQA
Trigger: AGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTCCAAATTAGAAACGTaGGGACTATGTGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLSKLET*GLCVLG
Trigger: GCCCAGAACACATAGTCCCCACGTTTCTAATTTGGA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCTGTCCAGGCTCCGGTaGTCCATTGGAATGAACTGG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRALSRLR*SIGMNW
Trigger: CCAGTTCATTCCAATGGATCACCGGAGCCTGGACAG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPSLIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNSLIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATAATGTCATGAGGGCCTaGGCTGCATCTCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNNVMRA*AASLLA
Trigger: TGCCAACAGAGATGCAGCTCAGGCCCTCATGACATT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTACAATGCCCACTGCTaGGGGCCAGAAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAYNAHC*GPEILR
Trigger: TCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGATTAATTCCTACTCCTaGACGCTTGCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLINSYS*TLASAH
Trigger: ATGTGCAGATGCAAGCGTTCAGGAGTAGGAATTAAT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AATCATCATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGTGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: NHHLSHSELAVQAPVIHWWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...CCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLLHGS*LGSSQC
Trigger: ACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAG...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALLHGS*LGSSQC
Trigger: ACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTGACACTTGGGAGCTaGTTCTTCAATAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELTLGS*FFNSIV
Trigger: CACGATGCTATTGAAGAAGCAGCTCCCAAGTGTCAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENASSCLQ*PLLRAR
Trigger: TCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGACTCAGCGAAGTCCCTaGCATTTAAAACCACATGAA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLTQRSP*HLKPHE
Trigger: TTCATGTGGTTTTAAATGGCAGGGACTTCGCTGAGT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAGAACAGTTGAAATATaGTCGCTAGGAAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLRTVEI*SLGRRD
Trigger: GTCCCTTCTTCCTAGCGAGCATATTTCAACTGTTCT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GTTCTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGTGCACGGCAGCTGCTTaGGTTCGAGTCAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLFQKIIITYRILNWLSRCTAAA*VRVNVE
Trigger: CTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA...CCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTCCCTTCTTTATCCTaGGATGCGTCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALPSLS*DASDRV
Trigger: TACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACTCCCTTCTTTATCCTaGGATGCGTCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLPSLS*DASDRV
Trigger: TACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAG...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCCACAGAGTCACTCCTaGGAACCGCAAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNPQSHS*EPQNSL
Trigger: AAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAAGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: HLSHSELAVQAPVIHWNEAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLLFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAATTAGGCGGATGATGTaGGCCGCAGTGTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLIRRMM*AAVFAN
Trigger: GTTAGCAAACACTGCGGCCCACATCATCCGCCTAAT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGAGAGAAGTGGAGCATaGACCCGTATGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENERSGA*TRMTPS
Trigger: GGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGAGAGAAGTGGAGCATaGACCCGTATGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNERSGA*TRMTPS
Trigger: GGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTGGCCATGGACACCTTaGAGAGAAGTGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNWPWTP*REVEHG
Trigger: TCCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTTGATAGTGAGACAGTaGTCATCTTACCAGACATGC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLLIVRQ*SSYQTC
Trigger: GCATGTCTGGTAAGATGACCACTGTCTCACTATCAA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEHRSGK*LCRLLI
Trigger: TATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGGGTGATCCATTGGAATaGACTGGTAGAACTGGAATG +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEGDPLE*TGRTGM
Trigger: CATTCCAGTTCTACCAGTTCATTCCAATGGATCACC...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTCACTTATCGCATTCTaGACTGGCTGTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRASLIAF*TGCPGS
Trigger: GGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTA +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLRWVVL*KTLSTL
Trigger: TAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTTGAAACTGTACTTTaGCGTGAGGCCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALETVL*REALFP
Trigger: TGGAAAGAGGGCCTCACGTCAAAGTACAGTTTCAAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTTTTTGCAGTACCTTTaGAGTCTTGGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEFLQYL*SLGACS
Trigger: ACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATACAATGCCCACTGCTaGGGGCCAGAAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQYNAHC*GPEILR
Trigger: TCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCTTCAGTTGAATTGGTaGACCGGCGCCTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNLQLNW*TGASSI
Trigger: TATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACTTCAGTTGAATTGGTaGACCGGCGCCTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLQLNW*TGASSI
Trigger: TATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAGTGATTATACTTACTaGCTCAGCGAAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMASDYTY*LSEVPA
Trigger: GGCAGGGACTTCGCTGAGTCAGTAAGTATAATCACT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGACACTTGGGAGCTaGTTCTTCAATAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALTLGS*FFNSIV
Trigger: CACGATGCTATTGAAGAAGCAGCTCCCAAGTGTCAG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNSSCLQ*PLLRAR
Trigger: TCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAAGTTCATGCTTACAATaGCCACTGCTGAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQSSCLQ*PLLRAR
Trigger: TCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCAGGCTAATCCACAATaGTCGGCCATGCCTATGATT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAQANPQ*SAMPMI
Trigger: AATCATAGGCATGGCCGAGCATTGTGGATTAGCCTG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTACTCCTGAACGCTTaGATCTGCACATGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELLLNA*ICTWLE
Trigger: TTCTAACCATGTGCAGATGCAAGCGTTCAGGAGTAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGGGTTCGAGTCAATGTaGAGAGCAAGGCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNGFESM*RARLCH
Trigger: ATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACTCCCTTCTTTATCCTaGGATGCGTCAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLPSLS*DASDRV
Trigger: TACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAACTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HSELAVQAPVIHWNELVELFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...TTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATATTAGGCGGATGATGTaGGCCGCAGTGTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNIRRMM*AAVFAN
Trigger: GTTAGCAAACACTGCGGCCCACATCATCCGCCTAAT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAATTAGGCGGATGATGTaGGCCGCAGTGTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQIRRMM*AAVFAN
Trigger: GTTAGCAAACACTGCGGCCCACATCATCCGCCTAAT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCAATATATAAGCATCTaGATCCAAGCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLQYISI*IQAMLS
Trigger: GGAGAGCATTGCTTGGATCCAGATGCTTATATATTG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCCCGTGCCTGGCACTTaGAAAGATACTGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNPVPGT*KDTEHH
Trigger: ATGATGCTCAGTATCTTTCCAAGTGCCAGGCACGGG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACCCGTGCCTGGCACTTaGAAAGATACTGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQPVPGT*KDTEHH
Trigger: ATGATGCTCAGTATCTTTCCAAGTGCCAGGCACGGG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCACAGGTCTGGAAAATaGCTCTGCAGGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAHRSGK*LCRLLI
Trigger: TATCAAGAGCCTGCAGAGCCATTTTCCAGACCTGTG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGCTTGCATCTGCACATaGTTAGAAACTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLACICT*LETQDN
Trigger: ATTGTCTTGAGTTTCTAACCATGTGCAGATGCAAGC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGGTGATCCATTGGAATaGACTGGTAGAACTGGAATG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAGDPLE*TGRTGM
Trigger: CATTCCAGTTCTACCAGTTCATTCCAATGGATCACC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTAACTGTACTTTGACGTaGGGCCCTCTTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENANCTLT*GPLSIR
Trigger: TCTAATGGAAAGAGGGCCTCACGTCAAAGTACAGTT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAAACTGTACTTTGACGTaGGGCCCTCTTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLNCTLT*GPLSIR
Trigger: TCTAATGGAAAGAGGGCCTCACGTCAAAGTACAGTT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCTTGAAACTGTACTTTaGCGTGAGGCCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENLETVL*REALFP
Trigger: TGGAAAGAGGGCCTCACGTCAAAGTACAGTTTCAAG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACTTGAAACTGTACTTTaGCGTGAGGCCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLETVL*REALFP
Trigger: TGGAAAGAGGGCCTCACGTCAAAGTACAGTTTCAAG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTTTTTGCAGTACCTTTaGAGTCTTGGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAFLQYL*SLGACS
Trigger: ACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTTTGGTTTGATTGTTaGGTTGAATGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELWFDC*VEWPWT
Trigger: TGTCCATGGCCATTCAACTCAACAATCAAACCAAAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATAGTGATTATACTTACTaGCTCAGCGAAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNSDYTY*LSEVPA
Trigger: GGCAGGGACTTCGCTGAGTCAGTAAGTATAATCACT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAAGTGATTATACTTACTaGCTCAGCGAAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPSDYTY*LSEVPA
Trigger: GGCAGGGACTTCGCTGAGTCAGTAAGTATAATCACT...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAGAAACTCAAGACAATaGGCAGGACACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTERNSRQ*AGHRIL
Trigger: GAGAATTCTGTGTCCTGCTCATTGTCTTGAGTTTCT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGATTAATTCCTACTCCTaGACGCTTGCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEINSYS*TLASAH
Trigger: ATGTGCAGATGCAAGCGTTCAGGAGTAGGAATTAAT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGAGCTTTCAGTCAAGTaGAATACGTGGACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAELSVK*NTWTAD
Trigger: ATCTGCTGTCCACGTATTTCACTTGACTGAAAGCTC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACTGACACTTGGGAGCTaGTTCTTCAATAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLTLGS*FFNSIV
Trigger: CACGATGCTATTGAAGAAGCAGCTCCCAAGTGTCAG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGCCGAGGGTGATTTTTaGAGTACCTTTGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAAEGDF*STFEVL
Trigger: CAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTCTGGATCCAAGCAATaGTCTCCTATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTESGSKQ*SPIFPP
Trigger: TGGAGGAAATATAGGAGAGCATTGCTTGGATCCAGA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACAGGCTAATCCACAATaGTCGGCCATGCCTATGATT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQQANPQ*SAMPMI
Trigger: AATCATAGGCATGGCCGAGCATTGTGGATTAGCCTG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSGKWL*RLLIVR
Trigger: TCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGTGGTCATAAATTACTaGCGTTTTACATCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLVVINY*RFTSWD
Trigger: ATCCCAAGATGTAAAACGGCAGTAATTTATGACCAC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGAAAGGGATCTTCTTTTaGAGGATGGAGGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLKGIFF*RMEENN
Trigger: ATTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTT...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTATTTCCAAGTGAGCTaGTTAACAAAGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLYFQVS*LTKGSS
Trigger: AGAAGATCCCTTTGTTAAGCAGCTCACTTGGAAATA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCTGAACGCTTGCATCTaGACATGGTTAGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTELNACI*TWLETQ
Trigger: TTGAGTTTCTAACCATGTGCAGATGCAAGCGTTCAG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCTACTCCTGAACGCTTaGATCTGCACATGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENALLLNA*ICTWLE
Trigger: TTCTAACCATGTGCAGATGCAAGCGTTCAGGAGTAG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAACTGTATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: SELAVQAPVIHWNELVELYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGAGAGAAGCATCATCTaGCATGGAACCACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAERSII*HGTTCL
Trigger: AAGACAAGTGGTTCCATGCCAGATGATGCTTCTCTC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGCTCGCTCCGGTGATCCATTaGAATGAACTGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: LFQKIIITYRILNWLSRLAPVIH*NELVEL
Trigger: CAGTTCTACCAGTTCATTCCAATGGATCACCGGAGC...GAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CCA 90 bp AATCATCATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGCTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NHHLSHSELAVQAPVIHWLFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...CCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTATTAGGCGGATGATGTaGGCCGCAGTGTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAIRRMM*AAVFAN
Trigger: GTTAGCAAACACTGCGGCCCACATCATCCGCCTAAT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTTCCATATTCTAGATTaGTCTTTCTTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLFHILD*SFFWKD
Trigger: GTCCTTCCAGAAGAAAGACCAATCTAGAATATGGAA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGGTGATCCATTGGAATaGACTGGTAGAACTGGAATG +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQGDPLE*TGRTGM
Trigger: CATTCCAGTTCTACCAGTTCATTCCAATGGATCACC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTTCAGATTCCAGACCTaGTTCCTCAACTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEFRFQT*FLNFLK
Trigger: TTTGAGAAAGTTGAGGAATCAGGTCTGGAATCTGAA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAAACTGTACTTTGACGTaGGGCCCTCTTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQNCTLT*GPLSIR
Trigger: TCTAATGGAAAGAGGGCCTCACGTCAAAGTACAGTT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTTTTTGCAGTACCTTTaGAGTCTTGGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENFLQYL*SLGACS
Trigger: ACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACTTTGGTTTGATTGTTaGGTTGAATGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLWFDC*VEWPWT
Trigger: TGTCCATGGCCATTCAACTCAACAATCAAACCAAAG...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTTGGGACTGCAGAAGTaGCTGTCTATAGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENALGLQK*LSIVVK
Trigger: TTTCACAACTATAGACAGTCACTTCTGCAGTCCCAA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTTGGGACTGCAGAAGTaGCTGTCTATAGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMALGLQK*LSIVVK
Trigger: TTTCACAACTATAGACAGTCACTTCTGCAGTCCCAA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTATACGTATGGAAGTTaGAAGTTGCCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEYTYGS*KLPHIL
Trigger: AAGGATGTGTGGCAACTTTCAACTTCCATACGTATA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAGAGCTTTCAGTCAAGTaGAATACGTGGACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPELSVK*NTWTAD
Trigger: ATCTGCTGTCCACGTATTTCACTTGACTGAAAGCTC...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGATAAACCCACATCTTaGAGCCATTCTGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENADKPTS*SHSASS
Trigger: ACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAWRARL*HLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AATAAGACACTTCAAATGACAGCTCTTCAGCCTCTGGTGGAATGTTCTTTTCCACTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: NKTLQMTALQPLVECSFPLLHGS*LGSSQC
Trigger: ACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAG...TGGAAAAGAACATTCCACCAGAGGCTGAAGAGCTGTCATTTGAAGTGTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGTATGGTATCTCTTTTaGACGGCAGCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAVWYLF*TAAAWV
Trigger: AACCCAAGCAGCTGCCGTGCAAAAGAGATACCATAC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTACATCCCTGATAGATTaGTTATCCTTTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFTSLID*LSFFLM
Trigger: CATGAGGAAAAAGGATAAGCAATCTATCAGGGATGT...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCTGACACTTGGGAGCTaGTTCTTCAATAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRALTLGS*FFNSIV
Trigger: CACGATGCTATTGAAGAAGCAGCTCCCAAGTGTCAG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGCCGAGGGTGATTTTTaGAGTACCTTTGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNAEGDF*STFEVL
Trigger: CAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTCTGGATCCAAGCAATaGTCTCCTATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENASGSKQ*SPIFPP
Trigger: TGGAGGAAATATAGGAGAGCATTGCTTGGATCCAGA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNSGKWL*RLLIVR
Trigger: TCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATCTGGAAAATGGCTCTaGAGGCTCTTGATAGTGAGA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPSGKWL*RLLIVR
Trigger: TCTCACTATCAAGAGCCTGCAGAGCCATTTTCCAGA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTACTCAGCGAAGTCCCTaGCATTTAAAACCACATGAA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENATQRSP*HLKPHE
Trigger: TTCATGTGGTTTTAAATGGCAGGGACTTCGCTGAGT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACTACTCCTGAACGCTTaGATCTGCACATGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLLLNA*ICTWLE
Trigger: TTCTAACCATGTGCAGATGCAAGCGTTCAGGAGTAG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAGAGAGAAGCATCATCTaGCATGGAACCACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPERSII*HGTTCL
Trigger: AAGACAAGTGGTTCCATGCCAGATGATGCTTCTCTC...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAQEDCK*NSKNPI
Trigger: AATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATTGATAGTGAGACAGTaGTCATCTTACCAGACATGC +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLIVRQ*SSYQTC
Trigger: GCATGTCTGGTAAGATGACCACTGTCTCACTATCAA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTCCAAATTAGAAACGTaGGGACTATGTGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENSKLET*GLCVLG
Trigger: GCCCAGAACACATAGTCCCCACGTTTCTAATTTGGA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATCCAAATTAGAAACGTaGGGACTATGTGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQSKLET*GLCVLG
Trigger: GCCCAGAACACATAGTCCCCACGTTTCTAATTTGGA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTA +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENARWVVL*KTLSTL
Trigger: TAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMARWVVL*KTLSTL
Trigger: TAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCTTTGGTTTGATTGTTaGGTTGAATGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENLWFDC*VEWPWT
Trigger: TGTCCATGGCCATTCAACTCAACAATCAAACCAAAG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGATCACCCATTCTGCTTaGGGATTTATACGATATACA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEITHSA*GFIRYT
Trigger: TGTATATCGTATAAATCCTCAAGCAGAATGGGTGAT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTTGGGACTGCAGAAGTaGCTGTCTATAGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNLGLQK*LSIVVK
Trigger: TTTCACAACTATAGACAGTCACTTCTGCAGTCCCAA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTATATCTGGGATAAATaGGAACTCTGTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAYIWDK*ELCPHF
Trigger: GAAATGGGGACAGAGTTCTCATTTATCCCAGATATA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAAGAAACTCAAGACAATaGGCAGGACACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQRNSRQ*AGHRIL
Trigger: GAGAATTCTGTGTCCTGCTCATTGTCTTGAGTTTCT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATATTAATTCCTACTCCTaGACGCTTGCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENINSYS*TLASAH
Trigger: ATGTGCAGATGCAAGCGTTCAGGAGTAGGAATTAAT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGGCAGATGAAAATGCCTaGAAGAAAAGATGGACATTA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEADENA*KKRWTL
Trigger: TAATGTCCATCTTTTCTTTCAGGCATTTTCATCTGC...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGAGCTTTCAGTCAAGTaGAATACGTGGACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAELSVK*NTWTAD
Trigger: ATCTGCTGTCCACGTATTTCACTTGACTGAAAGCTC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAATCTTGCAGCCATTCTaGTTCAAGTTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQILQPF*FKFSFI
Trigger: GATGAAGGAGAACTTGAAGCAGAATGGCTGCAAGAT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGATAAACCCACATCTTaGAGCCATTCTGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDKPTS*SHSASS
Trigger: ACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGCCGAGGGTGATTTTTaGAGTACCTTTGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAAEGDF*STFEVL
Trigger: CAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATATCTTGCAGCCATTCTaGTTCAAGTTCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENILQPF*FKFSFC
Trigger: ACAGAAGGAGAACTTGAAGCAGAATGGCTGCAAGAT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314319.7
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATCTGGATCCAAGCAATaGTCTCCTATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPSGSKQ*SPIFPP
Trigger: TGGAGGAAATATAGGAGAGCATTGCTTGGATCCAGA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATCTGGATCCAAGCAATaGTCTCCTATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQSGSKQ*SPIFPP
Trigger: TGGAGGAAATATAGGAGAGCATTGCTTGGATCCAGA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGGAGAAAAGTTCATTTaGACCAGAATGCTGATAGTC +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLGEKFI*TRMLIV
Trigger: GACTATCAGCATTCTGGTGCAAATGAACTTTTCTCC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATACTCAGCGAAGTCCCTaGCATTTAAAACCACATGAA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENTQRSP*HLKPHE
Trigger: TTCATGTGGTTTTAAATGGCAGGGACTTCGCTGAGT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGATGACAGGCATCTTTaGATTTTAACTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMADDRHL*ILTVGV
Trigger: AACCCCTACAGTTAAAATGCAAAGATGCCTGTCATC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACTGAACGCTTGCATCTaGACATGGTTAGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLNACI*TWLETQ
Trigger: TTGAGTTTCTAACCATGTGCAGATGCAAGCGTTCAG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENLFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCTCTTCAGCCTCTGGTaGAATGTTCTTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNLFSLW*NVLFQK
Trigger: TTTCTGGAAAAGAACATTCCACCAGAGGCTGAAGAG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENQEDCK*NSKNPI
Trigger: AATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNQEDCK*NSKNPI
Trigger: AATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAACTGCAGCTTCTCTATaGCACATTTTGTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLTAASL*HILSHL
Trigger: TAAATGGGACAAAATGTGCCATAGAGAAGCTGCAGT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTACTGCAGCTTCTCTATaGCACATTTTGTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMATAASL*HILSHL
Trigger: TAAATGGGACAAAATGTGCCATAGAGAAGCTGCAGT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGATTGGTCTTTCTTCTaGAAGGACCACATCATCTTT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENADWSFF*KDHIIF
Trigger: AAAGATGATGTGGTCCTTCCAGAAGAAAGACCAATC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATTGATAGTGAGACAGTaGTCATCTTACCAGACATGC +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLIVRQ*SSYQTC
Trigger: GCATGTCTGGTAAGATGACCACTGTCTCACTATCAA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATTCAGATTCCAGACCTaGTTCCTCAACTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQFRFQT*FLNFLK
Trigger: TTTGAGAAAGTTGAGGAATCAGGTCTGGAATCTGAA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTCAGATTCCAGACCTaGTTCCTCAACTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPFRFQT*FLNFLK
Trigger: TTTGAGAAAGTTGAGGAATCAGGTCTGGAATCTGAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTTCAGATTCCAGACCTaGTTCCTCAACTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENFRFQT*FLNFLK
Trigger: TTTGAGAAAGTTGAGGAATCAGGTCTGGAATCTGAA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENRWVVL*KTLSTL
Trigger: TAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTATATCTGGGATAAATaGGAACTCTGTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENYIWDK*ELCPHF
Trigger: GAAATGGGGACAGAGTTCTCATTTATCCCAGATATA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAACTTTGTCTACTGCTTaGATTGTTAAGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLTLSTA*IVKRES
Trigger: TGACTCTCTCTTAACAATTCAAGCAGTAGACAAAGT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTACTTTGTCTACTGCTTaGATTGTTAAGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMATLSTA*IVKRES
Trigger: TGACTCTCTCTTAACAATTCAAGCAGTAGACAAAGT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTATACGTATGGAAGTTaGAAGTTGCCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNYTYGS*KLPHIL
Trigger: AAGGATGTGTGGCAACTTTCAACTTCCATACGTATA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTATACGTATGGAAGTTaGAAGTTGCCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENYTYGS*KLPHIL
Trigger: AAGGATGTGTGGCAACTTTCAACTTCCATACGTATA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATTTATGAAGAACAGTTaGAATATGCTCGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLFMKNS*NMLARK
Trigger: CTTCCTAGCGAGCATATTTCAACTGTTCTTCATAAA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGATAAACCCACATCTTaGAGCCATTCTGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRADKPTS*SHSASS
Trigger: ACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTACATCCCTGATAGATTaGTTATCCTTTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENATSLID*LSFFLM
Trigger: CATGAGGAAAAAGGATAAGCAATCTATCAGGGATGT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGGAGAAAAGTTCATTTaGACCAGAATGCTGATAGTC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNGEKFI*TRMLIV
Trigger: GACTATCAGCATTCTGGTGCAAATGAACTTTTCTCC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAGGAGAAAAGTTCATTTaGACCAGAATGCTGATAGTC +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPGEKFI*TRMLIV
Trigger: GACTATCAGCATTCTGGTGCAAATGAACTTTTCTCC...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTCACGTTTTGAGACTTaGGAAGTAGACAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMASRFET*EVDKKM
Trigger: CATCTTTTTGTCTACTTCGCAAGTCTCAAAACGTGA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGTGGTCATAAATTACTaGCGTTTTACATCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLVVINY*RFTSWD
Trigger: ATCCCAAGATGTAAAACGGCAGTAATTTATGACCAC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGATGACAGGCATCTTTaGATTTTAACTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDDRHL*ILTVGV
Trigger: AACCCCTACAGTTAAAATGCAAAGATGCCTGTCATC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGATGACAGGCATCTTTaGATTTTAACTGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQDDRHL*ILTVGV
Trigger: AACCCCTACAGTTAAAATGCAAAGATGCCTGTCATC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAAAGGGATCTTCTTTTaGAGGATGGAGGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAKGIFF*RMEENN
Trigger: ATTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTAGAACAGTTGAAATATaGTCGCTAGGAAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRARTVEI*SLGRRD
Trigger: GTCCCTTCTTCCTAGCGAGCATATTTCAACTGTTCT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTATCTTGCAGCCATTCTaGTTCAAGTTCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAILQPF*FKFSLF
Trigger: AAATAAGGAGAACTTGAAGCAGAATGGCTGCAAGAT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENAYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAQEDCK*NSKNPI
Trigger: AATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATACTGCAGCTTCTCTATaGCACATTTTGTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENTAASL*HILSHL
Trigger: TAAATGGGACAAAATGTGCCATAGAGAAGCTGCAGT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTCTTCAATAGCATCGTaGCTTCATTCATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LFHSSCLQCPLLRARNTESSIAS*LHSFFL
Trigger: TAAGAAGAATGAATGAAGCCACGATGCTATTGAAGA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCAATATATAAGCATCTaGATCCAAGCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNQYISI*IQAMLS
Trigger: GGAGAGCATTGCTTGGATCCAGATGCTTATATATTG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGATTGGTCTTTCTTCTaGAAGGACCACATCATCTTT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDWSFF*KDHIIF
Trigger: AAAGATGATGTGGTCCTTCCAGAAGAAAGACCAATC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTGCATTTTTAAATTaGGACTGCAGAAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSAFLN*DCRSDC
Trigger: ACAGTCACTTCTGCAGTCCCAATTTAAAAATGCAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTCTGCATTTTTAAATTaGGACTGCAGAAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENASAFLN*DCRSDC
Trigger: ACAGTCACTTCTGCAGTCCCAATTTAAAAATGCAGA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTAACACTTTCTCCTaGAGGACATTATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSNTFS*RTLFSQ
Trigger: TTGGGAAAATAATGTCCTCCAGGAGAAAGTGTTAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGCTTGCATCTGCACATaGTTAGAAACTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQACICT*LETQDN
Trigger: ATTGTCTTGAGTTTCTAACCATGTGCAGATGCAAGC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAATCACCCATTCTGCTTaGGGATTTATACGATATACA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQITHSA*GFIRYT
Trigger: TGTATATCGTATAAATCCTCAAGCAGAATGGGTGAT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAATCACCCATTCTGCTTaGGGATTTATACGATATACA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPITHSA*GFIRYT
Trigger: TGTATATCGTATAAATCCTCAAGCAGAATGGGTGAT...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAATTTTCCACAGTCGATaGTGGAGAAAAGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQIFHSR*WRKVHL
Trigger: CAAATGAACTTTTCTCCATCATCGACTGTGGAAAAT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTATATCTGGGATAAATaGGAACTCTGTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAYIWDK*ELCPHF
Trigger: GAAATGGGGACAGAGTTCTCATTTATCCCAGATATA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATACTTTGTCTACTGCTTaGATTGTTAAGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENTLSTA*IVKRES
Trigger: TGACTCTCTCTTAACAATTCAAGCAGTAGACAAAGT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGCAGATGAAAATGCCTaGAAGAAAAGATGGACATTA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQADENA*KKRWTL
Trigger: TAATGTCCATCTTTTCTTTCAGGCATTTTCATCTGC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCAGATGAAAATGCCTaGAAGAAAAGATGGACATTA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENADENA*KKRWTL
Trigger: TAATGTCCATCTTTTCTTTCAGGCATTTTCATCTGC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTTATGAAGAACAGTTaGAATATGCTCGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPFMKNS*NMLARK
Trigger: CTTCCTAGCGAGCATATTTCAACTGTTCTTCATAAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATACATCCCTGATAGATTaGTTATCCTTTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNTSLID*LSFFLM
Trigger: CATGAGGAAAAAGGATAAGCAATCTATCAGGGATGT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAAGATCTGGATTATTTTaGAGGGTAGAAATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQRSGLF*RVEMKA
Trigger: AGCCTTCATTTCTACCCTGCAAAATAATCCAGATCT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATGGATAAAGCAGTTCTaGATTTTTAAATTGGGACTG +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLWIKQF*IFKLGL
Trigger: CAGTCCCAATTTAAAAATGCAGAACTGCTTTATCCA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTCACGTTTTGAGACTTaGGAAGTAGACAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNSRFET*EVDKKM
Trigger: CATCTTTTTGTCTACTTCGCAAGTCTCAAAACGTGA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATTATGTAAAGTCATGTaGCACCAATTACCCATACAT +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLCKVM*HQLPIH
Trigger: ATGTATGGGTAATTGGTGGCACATGACTTTACATAA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGTGGTCATAAATTACTaGCGTTTTACATCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNVVINY*RFTSWD
Trigger: ATCCCAAGATGTAAAACGGCAGTAATTTATGACCAC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATAAAGGGATCTTCTTTTaGAGGATGGAGGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENKGIFF*RMEENN
Trigger: ATTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATATTTCCAAGTGAGCTaGTTAACAAAGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQYFQVS*LTKGSS
Trigger: AGAAGATCCCTTTGTTAAGCAGCTCACTTGGAAATA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATATCTTGCAGCCATTCTaGTTCAAGTTCTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNILQPF*FKFSLF
Trigger: AAATAAGGAGAACTTGAAGCAGAATGGCTGCAAGAT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp CTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGCTCTATCCTTTTTCCTCATaGTTTGGGTATAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: LFQKIIITYRILNWLSRLYPFSS*FGYRYG
Trigger: ACCATACCTATACCCAAACCATGAGGAAAAAGGATA...GAGCCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTACTGCAGCTTCTCTATaGCACATTTTGTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRATAASL*HILSHL
Trigger: TAAATGGGACAAAATGTGCCATAGAGAAGCTGCAGT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAACTGAAGAAAAGGTTTaGTGCCATCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPTEEKV*CHHCRN
Trigger: ATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGT...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATACTGAAGAAAAGGTTTaGTGCCATCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LQCPLLRARNTENAVGTNTEEKV*CHHCRN
Trigger: ATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATACTGAAGAAAAGGTTTaGTGCCATCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENTEEKV*CHHCRN
Trigger: ATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTTCAATAGCATCGTaGCTTCATTCATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSSIAS*LHSFFL
Trigger: TAAGAAGAATGAATGAAGCCACGATGCTATTGAAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCAATATATAAGCATCTaGATCCAAGCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAQYISI*IQAMLS
Trigger: GGAGAGCATTGCTTGGATCCAGATGCTTATATATTG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTGATTGGTCTTTCTTCTaGAAGGACCACATCATCTTT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRADWSFF*KDHIIF
Trigger: AAAGATGATGTGGTCCTTCCAGAAGAAAGACCAATC...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTCCATATTCTAGATTaGTCTTTCTTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPFHILD*SFFWKD
Trigger: GTCCTTCCAGAAGAAAGACCAATCTAGAATATGGAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAATGAAGGCTATTTCTaGCATTCTTGCTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMANEGYF*HSCSKS
Trigger: ACTTTTTGAGCAAGAATGCCAGAAATAGCCTTCATT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTAATGAAGGCTATTTCTaGCATTCTTGCTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: HSSCLQCPLLRARNTENANEGYF*HSCSKS
Trigger: ACTTTTTGAGCAAGAATGCCAGAAATAGCCTTCATT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATCTAACACTTTCTCCTaGAGGACATTATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPSNTFS*RTLFSQ
Trigger: TTGGGAAAATAATGTCCTCCAGGAGAAAGTGTTAGA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR TCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTATTTTCCACAGTCGATaGTGGAGAAAAGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAIFHSR*WRKVHL
Trigger: CAAATGAACTTTTCTCCATCATCGACTGTGGAAAAT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTACATCCCTGATAGATTaGTTATCCTTTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRATSLID*LSFFLM
Trigger: CATGAGGAAAAAGGATAAGCAATCTATCAGGGATGT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GTTCTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGACATCCCTGATAGATTaGTTATCCTTTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: VLFQKIIITYRILNWLSRTSLID*LSFFLM
Trigger: CATGAGGAAAAAGGATAAGCAATCTATCAGGGATGT...CCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTAGATCTGGATTATTTTaGAGGGTAGAAATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRARSGLF*RVEMKA
Trigger: AGCCTTCATTTCTACCCTGCAAAATAATCCAGATCT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATGGATAAAGCAGTTCTaGATTTTTAAATTGGGACTG +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPWIKQF*IFKLGL
Trigger: CAGTCCCAATTTAAAAATGCAGAACTGCTTTATCCA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATTATGTAAAGTCATGTaGCACCAATTACCCATACAT +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLCKVM*HQLPIH
Trigger: ATGTATGGGTAATTGGTGGCACATGACTTTACATAA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTATGTAAAGTCATGTaGCACCAATTACCCATACAT +
Preference number: 4 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLCKVM*HQLPIH
Trigger: ATGTATGGGTAATTGGTGGCACATGACTTTACATAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTACTGAAGAAAAGGTTTaGTGCCATCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRATEEKV*CHHCRN
Trigger: ATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTTCCATATTCTAGATTaGTCTTTCTTCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAFHILD*SFFWKD
Trigger: GTCCTTCCAGAAGAAAGACCAATCTAGAATATGGAA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATAATGAAGGCTATTTCTaGCATTCTTGCTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENNEGYF*HSCSKS
Trigger: ACTTTTTGAGCAAGAATGCCAGAAATAGCCTTCATT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATTTAGAAAGCAGATCTaGATTATTTTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KASVELVNRRLFHSSCLQFRKQI*IILQGR
Trigger: TCTACCCTGCAAAATAATCCAGATCTGCTTTCTAAA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTTTAGAAAGCAGATCTaGATTATTTTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FHSSCLQCPLLRARNTENFRKQI*IILQGR
Trigger: TCTACCCTGCAAAATAATCCAGATCTGCTTTCTAAA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTCTAACACTTTCTCCTaGAGGACATTATTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRASNTFS*RTLFSQ
Trigger: TTGGGAAAATAATGTCCTCCAGGAGAAAGTGTTAGA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR GCA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTGGATAAAGCAGTTCTaGATTTTTAAATTGGGACTG +
Preference number: 4 (lower is better)
Translates to: FPANLRRTISIVSRKVRAWIKQF*IFKLGL
Trigger: CAGTCCCAATTTAAAAATGCAGAACTGCTTTATCCA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS CCA 90 bp GCGGGTGGCTGGCTGCGGCGCGGGGCGCGCAGCGCGACTCGGCGTTaGGGGGCTGGGCGCGCGCGTACGAGTGGTAGGCGGTCAGCACCA +
Preference number: 5 (lower is better)
Translates to: AGGWLRRGARSATRR*GAGRARTSGRRSAP
Trigger: TGGTGCTGACCGCCTACCACTCGTACGCGCGCGCCCAGCCCCCCAACGCCGAGTCGCGCTGCGCGCCCCGCGCCGCAGCCAGCCACCCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS TCA 90 bp TTCCCGCCAGAAATCCTCCATGGAGGCGCTGTCTACGGAGGCTTCTaGGTTGGAACGGCTGAAGGCAGGAGGATGGAGGGATTCATTGGA +
Preference number: 5 (lower is better)
Translates to: FPPEILHGGAVYGGF*VGTAEGRRMEGFIG
Trigger: TCCAATGAATCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTCCGTAGACAGCGCCTCCATGGAGGATTTCTGGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS GCA 90 bp CAGCACCCCACACACATTAAAATTGCTTCAACCAGGACAGGACAGTaGTGGCCGCCTCCAGCCGCACAGGGCCAGAAACAAAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: QHPTHIKIASTRTGQ*WPPPAAQGQKQRAM
Trigger: CATTGCCCTTTGTTTCTGGCCCTGTGCGGCTGGAGGCGGCCAGCACTGTCCTGTCCTGGTTGAAGCAATTTTAATGTGTGTGGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532723.5
CDS CCA 90 bp CACCCCACACACATTAAAATTGCTTCAACCAGGACAGGACAGTGCTaGCCGCCTCCAGCCGCACAGGGCCAGAAACAAAGGGCAATGGAG +
Preference number: 5 (lower is better)
Translates to: HPTHIKIASTRTGQC*PPPAAQGQKQRAME
Trigger: CTCCATTGCCCTTTGTTTCTGGCCCTGTGCGGCTGGAGGCGGCCAGCACTGTCCTGTCCTGGTTGAAGCAATTTTAATGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532723.5
CDS TCA 90 bp GAATGGCCATGGACACCTTGGAGAGAAGTGGAGCATGGACCCGTATaGCTCCTTCCGGCACGTCAGACATTCGTCTTGCCGAGGGTGATT +
Preference number: 5 (lower is better)
Translates to: EWPWTPWREVEHGPV*LLPARQTFVLPRVI
Trigger: AATCACCCTCGGCAAGACGAATGTCTGACGTGCCGGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS GCA 90 bp ACTCCTTCCGGCACGTCAGACATTCGTCTTGCCGAGGGTGATTTTTaGAGTACCTTTGAAGTCTTGGGGCTTGCAGTCTCCCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: TPSGTSDIRLAEGDF*STFEVLGLAVSRSR
Trigger: CCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAGACGAATGTCTGACGTGCCGGAAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CCA 90 bp AGGAGAGACTGGCCTAGCCTCCCAGCCTGCGTCTTTCTCCTGTGCTaGATTTTTCCTGCCCTCGAACATCGGACTCCAAGTTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RRDWPSLPACVFLLC*IFPALEHRTPSSSV
Trigger: CACTGAAGAACTTGGAGTCCGATGTTCGAGGGCAGGAAAAATCCAGCACAGGAGAAAGACGCAGGCTGGGAGGCTAGGCCAGTCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS TCA 90 bp GGATTTTTCCTGCCCTCGAACATCGGACTCCAAGTTCTTCAGTGTTaGGACTCAGCCTGGCTCTCTGCTCCTCAAGCTTGCAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: GFFLPSNIGLQVLQC*DSAWLSAPQACRQP
Trigger: AGGCTGTCTGCAAGCTTGAGGAGCAGAGAGCCAGGCTGAGTCTCAACACTGAAGAACTTGGAGTCCGATGTTCGAGGGCAGGAAAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 90 bp TCTCCTTCATCCACAGGTGTGACCTCAGCTGGCGGTGGCTCTTCTTaGCCTCCCATGCTGCTGTCTTTAATACTTTCTATTTCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: SPSSTGVTSAGGGSS*PPMLLSLILSISRQ
Trigger: CTGGCGGGAAATAGAAAGTATTAAAGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
CDS CCA 90 bp CTGTCTACGGAGGCTTCTGAGTTGGAACGGCTGAAGGCAGGAGGATaGAGGGATTCATTGGAGAGCATCCTGTTAATTCTTCGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: LSTEASELERLKAGG*RDSLESILLILRQR
Trigger: TCGCTGCCGAAGAATTAACAGGATGCTCTCCAATGAATCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTCCGTAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS CCA 90 bp ACAATCCAATCAGCTGCCAGTGAATATAAAGCAGGCAGAGGAACATaGAAAGGAGAGACTGGCCTAGCCTCCCAGCCTGCGTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TIQSAASEYKAGRGT*KGETGLASQPASFS
Trigger: GGAGAAAGACGCAGGCTGGGAGGCTAGGCCAGTCTCTCCTTTCCATGTTCCTCTGCCTGCTTTATATTCACTGGCAGCTGATTGGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 90 bp CCATTCTGCTTCAAGTTCTCCTTCATCCACAGGTGTGACCTCAGCTaGCGGTGGCTCTTCTTGCCCTCCCATGCTGCTGTCTTTAATACT +
Preference number: 5 (lower is better)
Translates to: PFCFKFSFIHRCDLS*RWLFLPSHAAVFNT
Trigger: AGTATTAAAGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAGGAGAACTTGAAGCAGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATGGCGGTGGCTCTTCTaGCCCTCCCATGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPWRWLF*PSHAAV
Trigger: GACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CAA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTTTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGA +
Preference number: 5 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFLHGSC*GSSQCG
Trigger: TCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAA...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAACGGAGGCTTCTGAGTaGGAACGGCTGAAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLTEASE*ERLKAG
Trigger: TCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTCCGT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CAA 90 bp CATTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAATTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGA +
Preference number: 5 (lower is better)
Translates to: HLSHSELAVQAPVIHWNELHGSC*GSSQCG
Trigger: TCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAA...TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584287.5
CDS-3UTR CAA 90 bp CACTTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAAGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: HLSHSELAVQAPVIHWNEGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...TTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CAA 90 bp CATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGGTAGAAGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: HSELAVQAPVIHWNELVEGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...TTCTACCAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGACAGGGTAGTACTGTaGAGAGAAGCATCATCTGGC +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLDRVVL*REASSG
Trigger: GCCAGATGATGCTTCTCTCAACAGTACTACCCTGTC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS TCA 90 bp TCTCACACTCCAGGCTTCCGTGACAACACTGTCTCCCGGTTTCCCTaGTCACTCTTTCTTAGTCTATTTCCCTGGCTTCTCTTGTACCCA +
Preference number: 5 (lower is better)
Translates to: SHTPGFRDNTVSRFP*SLFLSLFPWLLLYP
Trigger: TGGGTACAAGAGAAGCCAGGGAAATAGACTAAGAAAGAGTGATCAGGGAAACCGGGAGACAGTGTTGTCACGGAAGCCTGGAGTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS TCA 90 bp ATCCTGGGTGTGTCTGTGAGGGTGTTGTCAAAAGAGATTAATACTTaGGTCAGTGGGCTGGGGAAGGCAGATCCACCCTTAATCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ILGVSVRVLSKEINT*VSGLGKADPPLIWW
Trigger: CCACCAGATTAAGGGTGGATCTGCCTTCCCCAGCCCACTGACTCAAGTATTAATCTCTTTTGACAACACCCTCACAGACACACCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 90 bp CCTCATGGTTTGGGTATAGGTATGGTATCTCTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGTGGAGAGCAAGGCTTTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PHGLGIGMVSLLHGS*LGSSQCGEQGFAIF
Trigger: GAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACCCAAACCATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS GCA 90 bp AGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTATCCTGGGATaGGTCAGACAGGGTAGTACTGTTGAGAGAAGCATCATCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RVTPGNRKTPFFILG*VRQGSTVERSIIWH
Trigger: ATGCCAGATGATGCTTCTCTCAACAGTACTACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000532996.5
ENST00000581099.5
CDS CCA 90 bp TGCTTCAAGTTCTCCTTCATCCACAGGTGTGACCTCAGCTGGCGGTaGCTCTTCTTGCCCTCCCATGCTGCTGTCTTTAATACTTTCTAT +
Preference number: 5 (lower is better)
Translates to: CFKFSFIHRCDLSWR*LFLPSHAAVFNTFY
Trigger: ATAGAAAGTATTAAAGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAGGAGAACTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAATGGCCATGGACACCTaGGAGAGAAGTGGAGCATGG +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLMAMDT*ERSGAW
Trigger: CCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCAT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS CCA 90 bp TATGGTATCTCTTTTGCACGGCAGCTGCTTGGGTTCGAGTCAATGTaGAGAGCAAGGCTTTGCCATCTTCCTCTTCATCACCTGAGATCA +
Preference number: 5 (lower is better)
Translates to: YGISFARQLLGFESM*RARLCHLPLHHLRS
Trigger: TGATCTCAGGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCACCTGAGATCAGAGTaGATAAACCCACATCTTGCA +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLHLRSE*INPHLA
Trigger: TGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGA +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNLHGSC*GSSQCG
Trigger: TCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGA +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQLHGSC*GSSQCG
Trigger: TCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTGTGGGCCGCAGTGTTaGCTAACAGTAATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLCGPQC*LTVILH
Trigger: ATGAAGAATTACTGTTAGCAAACACTGCGGCCCACA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATATGGCCATGGACACCTaGGAGAGAAGTGGAGCATGG +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNMAMDT*ERSGAW
Trigger: CCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCAT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAATGGCCATGGACACCTaGGAGAGAAGTGGAGCATGG +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPMAMDT*ERSGAW
Trigger: CCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCAT...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTGGCTCTGCAGGCTCTaGATAGTGAGACAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAWLCRL*IVRQWS
Trigger: TGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS TCA 90 bp CACTCTTTCTTAGTCTATTTCCCTGGCTTCTCTTGTACCCAACCCTaGGAAGCGGCAGTGTTTCCTCTGTTTCATCCTTTACCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: HSFLVYFPGFSCTQP*EAAVFPLFHPLPLC
Trigger: ACAGAGGGGTAAAGGATGAAACAGAGGAAACACTGCCGCTTCTCAGGGTTGGGTACAAGAGAAGCCAGGGAAATAGACTAAGAAAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 90 bp AGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTATCCTGGGATaGGTCAGACAGGGTAGTACTGTTGAGAGAAGCATCATTTGTCTT +
Preference number: 5 (lower is better)
Translates to: RVTPGNRKTPFFILG*VRQGSTVERSIICL
Trigger: AAGACAAATGATGCTTCTCTCAACAGTACTACCCTGTCTGACGCATCCCAGGATAAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531294.5
CDS CCA 90 bp CACTCCAGGGTCTTTCTTTCGGTCACCGTCCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATTGTCTCGTCCTTTTACTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HSRVFLSVTVQEDCK*NSKNPIVSSFYFLC
Trigger: ACAGAGAAAGTAAAAGGACGAGACAATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTGGACGGTGACCGAAAGAAAGACCCTGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
ENST00000579245.1
ENST00000579689.1
CDS CCA 90 bp GCGTCAGACAGGGTAGTACATGGAACCACTTGTCTTGATAACTCTTaGAAGCTCTCTTTCTTCCTTGGTGCCATCCAGCTGATTAGTGTG +
Preference number: 5 (lower is better)
Translates to: ASDRVVHGTTCLDNS*KLSFFLGAIQLISV
Trigger: CACACTAATCAGCTGGATGGCACCAAGGAAGAAAGAGAGCTTCCAAGAGTTATCAAGACAAGTGGTTCCATGTACTACCCTGTCTGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CAA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGA +
Preference number: 5 (lower is better)
Translates to: FPANLRRTISIVSRKVRALHGSC*GSSQCG
Trigger: TCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENGMVSL*HGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAGACAGGGTAGTACTGTaGAGAGAAGCATCATCTGGC +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLDRVVL*REASSG
Trigger: GCCAGATGATGCTTCTCTCAACAGTACTACCCTGTC...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGTCTTCACGGTATTGCTaGACTTTAGCAGTACATCCT +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLSSRYC*TLAVHP
Trigger: AGGATGTACTGCTAAAGTCAAGCAATACCGTGAAGA...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTATGGCCATGGACACCTaGGAGAGAAGTGGAGCATGG +
Preference number: 5 (lower is better)
Translates to: FPANLRRTISIVSRKVRAMAMDT*ERSGAW
Trigger: CCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCAT...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAAAAGCTTCAGTTGAATaGGTGAACCGGCGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLKASVE*VNRRLF
Trigger: GAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAATGGCTCTGCAGGCTCTaGATAGTGAGACAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQWLCRL*IVRQWS
Trigger: TGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCA...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTGGCTCTGCAGGCTCTaGATAGTGAGACAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNWLCRL*IVRQWS
Trigger: TGACCACTGTCTCACTATCAAGAGCCTGCAGAGCCA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCCTACTCCTGAACGCTaGCATCTGCACATGGTTAGA +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAPTPER*HLHMVR
Trigger: TCTAACCATGTGCAGATGCAAGCGTTCAGGAGTAGG...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS CCA 90 bp AGAGGTGGCCACAGGAATTCTTCTTCCTGGGCAAGTACTGTATCTTaGTCATCTTTGTATCACTTGTCTCTGATACAGTCTGGCACACCA +
Preference number: 5 (lower is better)
Translates to: RGGHRNSSSWASTVS*SSLYHLSLIQSGTP
Trigger: TGGTGTGCCAGACTGTATCAGAGACAAGTGATACAAAGATGACCAAGATACAGTACTTGCCCAGGAAGAAGAATTCCTGTGGCCACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 90 bp GAGAGAAGCATCATCTGGCATGGAACCACTTGTCTTGATAACTCTTaGAAGCTCTCTTTCTTCCTTGGTGCCATCCAGCTGATTAGTGTG +
Preference number: 5 (lower is better)
Translates to: ERSIIWHGTTCLDNS*KLSFFLGAIQLISV
Trigger: CACACTAATCAGCTGGATGGCACCAAGGAAGAAAGAGAGCTTCCAAGAGTTATCAAGACAAGTGGTTCCATGCCAGATGATGCTTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000532996.5
ENST00000581099.5
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGACAGGGTAGTACTGTaGAGAGAAGCATCATCTGGC +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQDRVVL*REASSG
Trigger: GCCAGATGATGCTTCTCTCAACAGTACTACCCTGTC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGTGTGGGCCGCAGTGTTaGCTAACAGTAATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTECGPQC*LTVILH
Trigger: ATGAAGAATTACTGTTAGCAAACACTGCGGCCCACA...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEIFAVP*KSWGLQ
Trigger: CTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAAT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATAAAGCTTCAGTTGAATaGGTGAACCGGCGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNKASVE*VNRRLF
Trigger: GAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATAAAGCTTCAGTTGAATaGGTGAACCGGCGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENKASVE*VNRRLF
Trigger: GAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCCTACTCCTGAACGCTaGCATCTGCACATGGTTAGA +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNPTPER*HLHMVR
Trigger: TCTAACCATGTGCAGATGCAAGCGTTCAGGAGTAGG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS CCA 90 bp GAGCATCCTGTTAATTCTTCGGCAGCGAGGAATGGATTTTCATTCTaGAAATTCAAGTCATCTGCGGCACCACAAGCAATACAGCTCATG +
Preference number: 5 (lower is better)
Translates to: EHPVNSSAARNGFSF*KFKSSAAPQAIQLM
Trigger: CATGAGCTGTATTGCTTGTGGTGCCGCAGATGACTTGAATTTCCAGAATGAAAATCCATTCCTCGCTGCCGAAGAATTAACAGGATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 90 bp GGCTCTCTTCTTATAGCATCTGCCAGTACAAACGAGTTTCATTTCTaGACATGCTTATACCATACTCTCCTCCTCTCCTGTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSLLIASASTNEFHF*TCLYHTLLLSCSLA
Trigger: TGCCAGAGAACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATGAAACTCGTTTGTACTGGCAGATGCTATAAGAAGAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581099.5
CDS CCA 90 bp TATGGTATCTCTTTTGCACGGCAGCTGCTTGGGTTCGAGTCAATGTaGAGAGCAAGGCTTTGCCATCTTCCTCTTCATCACTTTCTATTT +
Preference number: 5 (lower is better)
Translates to: YGISFARQLLGFESM*RARLCHLPLHHFLF
Trigger: AAATAGAAAGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584387.1
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACACCTGAGATCAGAGTaGATAAACCCACATCTTGCA +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLHLRSE*INPHLA
Trigger: TGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTG...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTATCGCATTCTGAACTGGCTGTCCAGGCTCCGGTGATCCATTGGAATGAACTGCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: LSHSELAVQAPVIHWNELLFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...CAGTTCATTCCAATGGATCACCGGAGCCTGGACAGCCAGTTCAGAATGCGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CAA 90 bp GGTCTCAAGTATAGCCACAGAGTCACTCCTGGGAACCGCAAAACTCCCTTCTTTGACATCCCTGATAGATaGCTTATCCTTTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GLKYSHRVTPGNRKTPFFDIPDR*LILFPH
Trigger: ATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTC...AAAGAAGGGAGTTTTGCGGTTCCCAGGAGTGACTCTGTGGCTATACTTGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577524.5
ENST00000584287.5
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGGACTCATTCGGTTTTTaGATTCATTGGCAATCACTT +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLDSFGF*IHWQSL
Trigger: AAGTGATTGCCAATGAATCAAAAAACCGAATGAGTC...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAIFAVP*KSWGLQ
Trigger: CTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAAT...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAIFAVP*KSWGLQ
Trigger: CTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAAT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTT +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAGLIVE*NGHGHL
Trigger: AAGGTGTCCATGGCCATTCAACTCAACAATCAAACC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGGTCTTTGGCTTTGGTTaGATTGTTGAGTTGAATGGC +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEVFGFG*IVELNG
Trigger: GCCATTCAACTCAACAATCAAACCAAAGCCAAAGAC...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCAAAGGGATCTTCTTTaGCAGGATGGAGGAAAACAA +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEQRDLL*QDGGKQ
Trigger: TTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTTG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTCTGCAGGCTCTTGCAAAGACATAAAACATaGGCGTTTTCTAGTGTCATG +
Preference number: 5 (lower is better)
Translates to: GLCVLGNHRSGKWLCRLLQRHKT*AFSSVM
Trigger: CATGACACTAGAAAACGCCAATGTTTTATGTCTTTG...CAAGAGCCTGCAGAGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS GCA 90 bp ACATCTTGCAGCCATTCTGCTTCAAGTTCTCCTTATTTCTGGACATaGTTATACCATACTCTCCTCCTCTCCTGTTCTCTGGCAATACTG +
Preference number: 5 (lower is better)
Translates to: TSCSHSASSSPYFWT*LYHTLLLSCSLAIL
Trigger: CAGTATTGCCAGAGAACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATAAGGAGAACTTGAAGCAGAATGGCTGCAAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419673.6
ENST00000531294.5
CDS CCA 90 bp TTGTTGATTCCACAGCACATTCTCACTTGTCCACTCTGTTCGACTTaGATTTTCTCCCAGTGCAGTATATCAAAGGCAGCAAGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LLIPQHILTCPLCST*IFSQCSISKAASPK
Trigger: TTTGGGACTTGCTGCCTTTGATATACTGCACTGGGAGAAAATCCAAGTCGAACAGAGTGGACAAGTGAGAATGTGCTGTGGAATCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGGATGGAGGGATTCATaGGAGAGCATCCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNGWRDS*ESILLI
Trigger: AATTAACAGGATGCTCTCCAATGAATCCCTCCATCC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTCTTCACGGTATTGCTaGACTTTAGCAGTACATCCT +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENASSRYC*TLAVHP
Trigger: AGGATGTACTGCTAAAGTCAAGCAATACCGTGAAGA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTTCACGGTATTGCTaGACTTTAGCAGTACATCCT +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSSRYC*TLAVHP
Trigger: AGGATGTACTGCTAAAGTCAAGCAATACCGTGAAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTGTGGGCCGCAGTGTTaGCTAACAGTAATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENCGPQC*LTVILH
Trigger: ATGAAGAATTACTGTTAGCAAACACTGCGGCCCACA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENIFAVP*KSWGLQ
Trigger: CTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAAT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTT +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQGLIVE*NGHGHL
Trigger: AAGGTGTCCATGGCCATTCAACTCAACAATCAAACC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENGLIVE*NGHGHL
Trigger: AAGGTGTCCATGGCCATTCAACTCAACAATCAAACC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTT +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNGLIVE*NGHGHL
Trigger: AAGGTGTCCATGGCCATTCAACTCAACAATCAAACC...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTCTTTGGCTTTGGTTaGATTGTTGAGTTGAATGGC +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAVFGFG*IVELNG
Trigger: GCCATTCAACTCAACAATCAAACCAAAGCCAAAGAC...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTATCTCTTTCACCTCTTTaGTTTCGTAGCATTGGCTAC +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLSLSPL*FRSIGY
Trigger: GTAGCCAATGCTACGAAACAAAAGAGGTGAAAGAGA...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGCCAATGATACTAGTATaGACATGGCCTTCCATACAT +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTEPMILV*TWPSIH
Trigger: ATGTATGGAAGGCCATGTCAATACTAGTATCATTGG...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCAAAGGGATCTTCTTTaGCAGGATGGAGGAAAACAA +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAQRDLL*QDGGKQ
Trigger: TTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTTG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGACAGGGTAGTACTGTaGAGAGAAGCATCATTTGTC +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDRVVL*REASFV
Trigger: GACAAATGATGCTTCTCTCAACAGTACTACCCTGTC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531294.5
CDS TCA 90 bp AGGCAGGTATATATTCCACAGGGAAGAGAGAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTACTGCAGCTTCTCTATGGCACATTT +
Preference number: 5 (lower is better)
Translates to: RQVYIPQGRERWVVL*KTLSTLLQLLYGTF
Trigger: AAATGTGCCATAGAGAAGCTGCAGTAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCTCTCTCTTCCCTGTGGAATATATACCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
ENST00000579245.1
ENST00000579689.1
CDS GCA 90 bp CTTCTTATAGCATCTGCCAGTACAAACGAGTTTCATTTCTGGACATaGTTATACCATACTCTCCTCCTCTCCTGTTCTCTGGCAATACTG +
Preference number: 5 (lower is better)
Translates to: LLIASASTNEFHFWT*LYHTLLLSCSLAIL
Trigger: CAGTATTGCCAGAGAACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATGAAACTCGTTTGTACTGGCAGATGCTATAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581099.5
CDS CCA 90 bp TGTGGATACTCTGTTTCACACTTATCTCTTGATATAAGACAGAGGTaGCCACAGGAATTCTTCTTCCTGGGCAAGTACTGTATCTTGGTC +
Preference number: 5 (lower is better)
Translates to: CGYSVSHLSLDIRQR*PQEFFFLGKYCILV
Trigger: GACCAAGATACAGTACTTGCCCAGGAAGAAGAATTCCTGTGGCCACCTCTGTCTTATATCAAGAGATAAGTGTGAAACAGAGTATCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLLFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENALFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTGACATCCCTGATAGATaGCTTATCCTTTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMADIPDR*LILFPH
Trigger: ATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTC...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTTATCAGCATTAAACTaGGCATCAAGTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENALSALN*ASSSSR
Trigger: CCGTGAAGAACTTGATGCCAAGTTTAATGCTGATAA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGTCTTTGGCTTTGGTTaGATTGTTGAGTTGAATGGC +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQVFGFG*IVELNG
Trigger: GCCATTCAACTCAACAATCAAACCAAAGCCAAAGAC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CTCTTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCACCCATTCTGCTaGAGGATTTATACGATATAC +
Preference number: 5 (lower is better)
Translates to: LFHSSCLQCPLLRARNTENHPFC*RIYTIY
Trigger: GTATATCGTATAAATCCTCAAGCAGAATGGGTGATT...CTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp CATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTTGGAGAAAAGTTCATTaGCACCAGAATGCTGATAGT +
Preference number: 5 (lower is better)
Translates to: HSSCLQCPLLRARNTENAWRKVH*HQNADS
Trigger: ACTATCAGCATTCTGGTGCAAATGAACTTTTCTCCA...AGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTTGGAGAAAAGTTCATTaGCACCAGAATGCTGATAGT +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMAWRKVH*HQNADS
Trigger: ACTATCAGCATTCTGGTGCAAATGAACTTTTCTCCA...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAATATACGTATGGAAGTaGAAAGTTGCCACACATCCT +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLIYVWK*KVATHP
Trigger: AGGATGTGTGGCAACTTTCAACTTCCATACGTATAT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATCAAAGGGATCTTCTTTaGCAGGATGGAGGAAAACAA +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNQRDLL*QDGGKQ
Trigger: TTGTTTTCCTCCATCCTGCAAAAGAAGATCCCTTTG...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS GCA 90 bp TCTTCCTCTTCATCACCTGAGATCAGAGTTGATAAACCCACATCTTaGAGCCATTCTGCTTCAAGTTCTCCTTATTTCTGGACATGCTTA +
Preference number: 5 (lower is better)
Translates to: SSSSSPEIRVDKPTS*SHSASSSPYFWTCL
Trigger: TAAGCATGTCCAGAAATAAGGAGAACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTGATGAAGAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGACATCCCTGATAGATaGCTTATCCTTTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDIPDR*LILFPH
Trigger: ATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATTTATCAGCATTAAACTaGGCATCAAGTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENLSALN*ASSSSR
Trigger: CCGTGAAGAACTTGATGCCAAGTTTAATGCTGATAA...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCATTATCAGCATTAAACTaGGCATCAAGTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPLSALN*ASSSSR
Trigger: CCGTGAAGAACTTGATGCCAAGTTTAATGCTGATAA...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GAGAAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTAAATCACCCATTCTGCTaGAGGATTTATACGATATAC +
Preference number: 5 (lower is better)
Translates to: EKASVELVNRRLFHSSCLNHPFC*RIYTIY
Trigger: GTATATCGTATAAATCCTCAAGCAGAATGGGTGATT...TAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp ATTAGAAACGTGGGGACTATGTGTTCTGGGCAATCACAGGTCTGGAAAATGGCTAATCACCCATTCTGCTaGAGGATTTATACGATATAC +
Preference number: 5 (lower is better)
Translates to: IRNVGTMCSGQSQVWKMANHPFC*RIYTIY
Trigger: GTATATCGTATAAATCCTCAAGCAGAATGGGTGATT...AGCCATTTTCCAGACCTGTGATTGCCCAGAACACATAGTCCCCACGTTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTGGAGAAAAGTTCATTaGCACCAGAATGCTGATAGT +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNWRKVH*HQNADS
Trigger: ACTATCAGCATTCTGGTGCAAATGAACTTTTCTCCA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATATATACGTATGGAAGTaGAAAGTTGCCACACATCCT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENIYVWK*KVATHP
Trigger: AGGATGTGTGGCAACTTTCAACTTCCATACGTATAT...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAATATACGTATGGAAGTaGAAAGTTGCCACACATCCT +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQIYVWK*KVATHP
Trigger: AGGATGTGTGGCAACTTTCAACTTCCATACGTATAT...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACCAATGATACTAGTATaGACATGGCCTTCCATACAT +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQPMILV*TWPSIH
Trigger: ATGTATGGAAGGCCATGTCAATACTAGTATCATTGG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATCCAATGATACTAGTATaGACATGGCCTTCCATACAT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENPMILV*TWPSIH
Trigger: ATGTATGGAAGGCCATGTCAATACTAGTATCATTGG...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: FPANLRRTISIVSRKVRALFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GTTCTTTTCCAGAAAATCATCATCACTTATCGCATTCTGAACTGGCTGTCCAGGCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCT +
Preference number: 5 (lower is better)
Translates to: VLFQKIIITYRILNWLSRLFPHG*GIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAG...CCTGGACAGCCAGTTCAGAATGCGATAAGTGATGATGATTTTCTGGAAAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CAA 90 bp TTCCATAGTTCATGCTTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGACTCATTCGGTTTTTaGATTCATTGGCAATCACTT +
Preference number: 5 (lower is better)
Translates to: FHSSCLQCPLLRARNTENDSFGF*IHWQSL
Trigger: AAGTGATTGCCAATGAATCAAAAAACCGAATGAGTC...ATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAAGCATGAACTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCAGACTCATTCGGTTTTTaGATTCATTGGCAATCACTT +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPDSFGF*IHWQSL
Trigger: AAGTGATTGCCAATGAATCAAAAAACCGAATGAGTC...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAAGACTCATTCGGTTTTTaGATTCATTGGCAATCACTT +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQDSFGF*IHWQSL
Trigger: AAGTGATTGCCAATGAATCAAAAAACCGAATGAGTC...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS-3UTR CAA 90 bp TTACAATGCCCACTGCTGAGGGCCAGAAATACTGAGAATGCTGTAGGAACAAATTGTCTACTGCTTGAATaGTTAAGAGAGAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: LQCPLLRARNTENAVGTNCLLLE*LRESHL
Trigger: CAAATGACTCTCTCTTAACAATTCAAGCAGTAGACA...ATTTGTTCCTACAGCATTCTCAGTATTTCTGGCCCTCAGCAGTGGGCATTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp AAAGCTTCAGTTGAATTGGTGAACCGGCGCCTCTTCCATAGTTCATGCTTACAACAAAGACATAAAACATaGGCGTTTTCTAGTGTCATG +
Preference number: 5 (lower is better)
Translates to: KASVELVNRRLFHSSCLQQRHKT*AFSSVM
Trigger: CATGACACTAGAAAACGCCAATGTTTTATGTCTTTG...TTGTAAGCATGAACTATGGAAGAGGCGCCGGTTCACCAATTCAACTGAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp GACAGTGGTCATCTTACCAGACATGCATCTGATTTTAAGCCTCAGGCTAATCCACAAAGACATAAAACATaGGCGTTTTCTAGTGTCATG +
Preference number: 5 (lower is better)
Translates to: DSGHLTRHASDFKPQANPQRHKT*AFSSVM
Trigger: CATGACACTAGAAAACGCCAATGTTTTATGTCTTTG...TGGATTAGCCTGAGGCTTAAAATCAGATGCATGTCTGGTAAGATGACCACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS-3UTR CAA 90 bp AATAAGACACTTCAAATGACAGCTCTTCAGCCTCTGGTGGAATGTTCTTTTCCAGACATCCCTGATAGATaGCTTATCCTTTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: NKTLQMTALQPLVECSFPDIPDR*LILFPH
Trigger: ATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTC...TGGAAAAGAACATTCCACCAGAGGCTGAAGAGCTGTCATTTGAAGTGTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577524.5
CDS-3UTR CAA 90 bp TTTCCAGCTAATCTGAGAAGGACTATATCCATAGTCTCGAGGAAAGTCAGAGCTTGTCTACTGCTTGAATaGTTAAGAGAGAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: FPANLRRTISIVSRKVRACLLLE*LRESHL
Trigger: CAAATGACTCTCTCTTAACAATTCAAGCAGTAGACA...AGCTCTGACTTTCCTCGAGACTATGGATATAGTCCTTCTCAGATTAGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
CDS CCA 90 bp ATTCATTTATTCACTCAGACATATAGTCTACTTGGGAAACTTAGCTaGCAAATTCAGGTTCCCAGGTCCAGGGCTTCATTTCACAATATT +
Preference number: 5 (lower is better)
Translates to: IHLFTQTYSLLGKLS*QIQVPRSRASFHNI
Trigger: AATATTGTGAAATGAAGCCCTGGACCTGGGAACCTGAATTTGCCAGCTAAGTTTCCCAAGTAGACTATATGTCTGAGTGAATAAATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583410.1
CDS GCA 90 bp CTCGAGGATATTTTAAGAACTTTGTTGGGGTTTAATCACCCATTCTaGTTGAGGATTTATACGATATACATCCAATATATAAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: LEDILRTLLGFNHPF*LRIYTIYIQYISIW
Trigger: CCAGATGCTTATATATTGGATGTATATCGTATAAATCCTCAAGCAGAATGGGTGATTAAACCCCAACAAAGTTCTTAAAATATCCTCGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS CCA 72 bp TCGGCGCCGGCCCCAGAACAAAGACCGGGACCAGCATaGACCGGCGCGCCGGGAGGCTGTCAGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SAPAPEQRPGPA*TGAPGGCQQLG
Trigger: GCCCAGCTGCTGACAGCCTCCCGGCGCGCCGGTCCATGCTGGTCCCGGTCTTTGTTCTGGGGCCGGCGCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS GCA 72 bp GCGAGGAATGGATTTTCTGCTGAGCGGGTGGCTGGCTaGGGCGCGGGGCGCGCAGCGCGACTCGGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: ARNGFSAERVAG*GAGRAARLGVG
Trigger: CCCAACGCCGAGTCGCGCTGCGCGCCCCGCGCCGCAGCCAGCCACCCGCTCAGCAGAAAATCCATTCCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383472.9
CDS CAA 90 bp CGCCAGAAATCCTCCATGGAGGCGCTGTCTACGGAGGCTTCTGAGTaGGAACGGCTGAAGGCAGGAGGATGGAGGGATTCATTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RQKSSMEALSTEASE*ERLKAGGWRDSLES
Trigger: GCTCTCCAATGAATCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTCCGTAGACAGCGCCTCCATGGAGGATTTCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS TCA 72 bp GAAATCCTCCATGGAGGCGCTGTCTACGGAGGCTTCTaGGTTGGAACGGCTGAAGGCAGGAGGATGGAGGGA +
Preference number: 6 (lower is better)
Translates to: EILHGGAVYGGF*VGTAEGRRMEG
Trigger: TCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTCCGTAGACAGCGCCTCCATGGAGGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS GCA 72 bp GACTGGCCTAGCCTCCCAGCCTGCGTCTTTCTCCTGTaGTGGATTTTTCCTGCCCTCGAACATCGGACTCCA +
Preference number: 6 (lower is better)
Translates to: DWPSLPACVFLL*WIFPALEHRTP
Trigger: TGGAGTCCGATGTTCGAGGGCAGGAAAAATCCAGCACAGGAGAAAGACGCAGGCTGGGAGGCTAGGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS TCA 72 bp TGGACACCTTGGAGAGAAGTGGAGCATGGACCCGTATaGCTCCTTCCGGCACGTCAGACATTCGTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: WTPWREVEHGPV*LLPARQTFVLP
Trigger: CGGCAAGACGAATGTCTGACGTGCCGGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTCCAAGGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CCA 72 bp TTCAAGTTCTCCTTCATCCACAGGTGTGACCTCAGCTaGCGGTGGCTCTTCTTGCCCTCCCATGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: FKFSFIHRCDLS*RWLFLPSHAAV
Trigger: GACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAGGAGAACTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
CDS CAA 90 bp GACATTCGTCTTGCCGAGGGTGATTTTTGCAGTACCTTTGAAGTCTaGGGGCTTGCAGTCTCCCGCTCGAGGGTCTTCCTCCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: DIRLAEGDFCSTFEV*GLAVSRSRVFLLSS
Trigger: GCTGCTCAGGAGGAAGACCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAGACGAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CAA 90 bp GCACGTCAGACATTCGTCTTGCCGAGGGTGATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAGTCTCCCGCTCGAGGGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ARQTFVLPRVIFAVP*KSWGLQSPARGSSS
Trigger: GGAGGAAGACCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAGACGAATGTCTGACGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS TCA 72 bp CTGCCCTCGAACATCGGACTCCAAGTTCTTCAGTGTTaGGACTCAGCCTGGCTCTCTGCTCCTCAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: LPSNIGLQVLQC*DSAWLSAPQAC
Trigger: GCAAGCTTGAGGAGCAGAGAGCCAGGCTGAGTCTCAACACTGAAGAACTTGGAGTCCGATGTTCGAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp AACATGGAAAGGAGAGACTGGCCTAGCCTCCCAGCCTaGGTCTTTCTCCTGTGCTGGATTTTTCCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: NMERRDWPSLPA*VFLLCWIFPAL
Trigger: GAGGGCAGGAAAAATCCAGCACAGGAGAAAGACGCAGGCTGGGAGGCTAGGCCAGTCTCTCCTTTCCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 72 bp TTGCCGAGGGTGATTTTTGCAGTACCTTTGAAGTCTTaGGGCTTGCAGTCTCCCGCTCGAGGGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPRVIFAVPLKS*GLQSPARGSSS
Trigger: GGAGGAAGACCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CCA 72 bp CACATTAAAATTGCTTCAACCAGGACAGGACAGTGCTaGCCGCCTCCAGCCGCACAGGGCCAGAAACAAAGG +
Preference number: 6 (lower is better)
Translates to: HIKIASTRTGQC*PPPAAQGQKQR
Trigger: CCTTTGTTTCTGGCCCTGTGCGGCTGGAGGCGGCCAGCACTGTCCTGTCCTGGTTGAAGCAATTTTAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532723.5
CDS CAA 72 bp CCTGCCCTCGAACATCGGACTCCAAGTTCTTCAGTGTaGAGACTCAGCCTGGCTCTCTGCTCCTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: PALEHRTPSSSV*RLSLALCSSSL
Trigger: CAAGCTTGAGGAGCAGAGAGCCAGGCTGAGTCTCAACACTGAAGAACTTGGAGTCCGATGTTCGAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 72 bp CTTGCCGAGGGTGATTTTTGCAGTACCTTTGAAGTCTaGGGGCTTGCAGTCTCCCGCTCGAGGGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LAEGDFCSTFEV*GLAVSRSRVFL
Trigger: GAGGAAGACCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS GCA 72 bp ACACACATTAAAATTGCTTCAACCAGGACAGGACAGTaGTGGCCGCCTCCAGCCGCACAGGGCCAGAAACAA +
Preference number: 6 (lower is better)
Translates to: THIKIASTRTGQ*WPPPAAQGQKQ
Trigger: TTGTTTCTGGCCCTGTGCGGCTGGAGGCGGCCAGCACTGTCCTGTCCTGGTTGAAGCAATTTTAATGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532723.5
CDS CAA 72 bp ACATTCGTCTTGCCGAGGGTGATTTTTGCAGTACCTTaGAAGTCTTGGGGCTTGCAGTCTCCCGCTCGAGGG +
Preference number: 6 (lower is better)
Translates to: TFVLPRVIFAVP*KSWGLQSPARG
Trigger: CCCTCGAGCGGGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAGACGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS GCA 72 bp GGCACGTCAGACATTCGTCTTGCCGAGGGTGATTTTTaGAGTACCTTTGAAGTCTTGGGGCTTGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GTSDIRLAEGDF*STFEVLGLAVS
Trigger: GGAGACTGCAAGCCCCAAGACTTCAAAGGTACTGCAAAAATCACCCTCGGCAAGACGAATGTCTGACGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CAA 90 bp TTCTCCTTCATCCACAGGTGTGACCTCAGCTGGCGGTGGCTCTTCTaGCCCTCCCATGCTGCTGTCTTTAATACTTTCTATTTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: FSFIHRCDLSWRWLF*PSHAAVFNTFYFPP
Trigger: TGGCGGGAAATAGAAAGTATTAAAGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGATGAAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
CDS CAA 90 bp TGCACGGCAGCTGCTTGGGTTCGAGTCAATGTGGAGAGCAAGGCTTaGCCATCTTCCTCTTCATCACCTGAGATCAGAGTTGATAAACCC +
Preference number: 6 (lower is better)
Translates to: CTAAAWVRVNVESKA*PSSSSSPEIRVDKP
Trigger: GGGTTTATCAACTCTGATCTCAGGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
CDS TCA 72 bp CCAGGCTTCCGTGACAACACTGTCTCCCGGTTTCCCTaGTCACTCTTTCTTAGTCTATTTCCCTGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PGFRDNTVSRFP*SLFLSLFPWLL
Trigger: GAGAAGCCAGGGAAATAGACTAAGAAAGAGTGATCAGGGAAACCGGGAGACAGTGTTGTCACGGAAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp CGGCATGAGAATCACTTTAACCTGGGAGGAAAAGCTTaGAGTGAGCCGAGATCATGCCACTGTGCTTTAGCC +
Preference number: 6 (lower is better)
Translates to: RHENHFNLGGKA*SEPRSCHCALA
Trigger: GGCTAAAGCACAGTGGCATGATCTCGGCTCACTGCAAGCTTTTCCTCCCAGGTTAAAGTGATTCTCATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp TCCACAGGTGTGACCTCAGCTGGCGGTGGCTCTTCTTaGCCTCCCATGCTGCTGTCTTTAATACTTTCTATT +
Preference number: 6 (lower is better)
Translates to: STGVTSAGGGSS*PPMLLSLILSI
Trigger: AATAGAAAGTATTAAAGACAGCAGCATGGGAGGGCAAGAAGAGCCACCGCCAGCTGAGGTCACACCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
CDS CCA 72 bp TCTTTTGCACGGCAGCTGCTTGGGTTCGAGTCAATGTaGAGAGCAAGGCTTTGCCATCTTCCTCTTCATCAC +
Preference number: 6 (lower is better)
Translates to: SFARQLLGFESM*RARLCHLPLHH
Trigger: GTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CCA 72 bp CTTCATCACTTTCTATTTCCCGCCAGAAATCCTCCATaGAGGCGCTGTCTACGGAGGCTTCTGAGTTGGAAC +
Preference number: 6 (lower is better)
Translates to: LHHFLFPARNPP*RRCLRRLLSWN
Trigger: GTTCCAACTCAGAAGCCTCCGTAGACAGCGCCTCCATGGAGGATTTCTGGCGGGAAATAGAAAGTGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584387.1
CDS CAA 72 bp GGTATAGGTATGGTATCTCTTTTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGAGAGCAAGGCTTTGCC +
Preference number: 6 (lower is better)
Translates to: GIGMVSLLHGSC*GSSQCGEQGFA
Trigger: GGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CAA 90 bp GCTTCTGAGTTGGAACGGCTGAAGGCAGGAGGATGGAGGGATTCATaGGAGAGCATCCTGTTAATTCTTCGGCAGCGAGGAATGGATTTT +
Preference number: 6 (lower is better)
Translates to: ASELERLKAGGWRDS*ESILLILRQRGMDF
Trigger: AAAATCCATTCCTCGCTGCCGAAGAATTAACAGGATGCTCTCCAATGAATCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS CAA 90 bp CATGGTTTGGGTATAGGTATGGTATCTCTTTTGCACGGCAGCTGCTaGGGTTCGAGTCAATGTGGAGAGCAAGGCTTTGCCATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: HGLGIGMVSLLHGSC*GSSQCGEQGFAIFL
Trigger: GAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACCCAAACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS GCA 72 bp CTGCTTGGGTTCGAGTCAATGTGGAGAGCAAGGCTTTaGCATCTTCCTCTTCATCACTTTCTATTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LLGFESMWRARL*HLPLHHFLFPA
Trigger: GGCGGGAAATAGAAAGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584387.1
CDS CCA 72 bp GAGGCTTCTGAGTTGGAACGGCTGAAGGCAGGAGGATaGAGGGATTCATTGGAGAGCATCCTGTTAATTCTT +
Preference number: 6 (lower is better)
Translates to: EASELERLKAGG*RDSLESILLIL
Trigger: AAGAATTAACAGGATGCTCTCCAATGAATCCCTCCATCCTCCTGCCTTCAGCCGTTCCAACTCAGAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262227.7
ENST00000383472.9
ENST00000532723.5
ENST00000583410.1
ENST00000584387.1
CDS CAA 72 bp CTGATCCCCTGCAAATTCATCACCAACACACAGACCTaGCTACCTTCACTGGTACAAGTCATGAACTGCGGC +
Preference number: 6 (lower is better)
Translates to: LIPCKFITNTQT*LPSLVQVMNCG
Trigger: GCCGCAGTTCATGACTTGTACCAGTGAAGGTAGCAAGGTCTGTGTGTTGGTGATGAATTTGCAGGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 72 bp CCCACCCCTCTTGTTGATTCCACAGCACATTCTCACTaGTCCACTCTGTTCGACTTGGATTTTCTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: PTPLVDSTAHSH*STLFDLDFLPV
Trigger: CACTGGGAGAAAATCCAAGTCGAACAGAGTGGACAAGTGAGAATGTGCTGTGGAATCAACAAGAGGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 72 bp GGAAGGAAAGTGCAGCTCGCTGCCAGTGCAGTATTCTaGGAGCAAGTGGAAAACGGGTTAATGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: GRKVQLAASAVF*EQVENGLMCVC
Trigger: ACACACACACATTAACCCGTTTTCCACTTGCTCCAAGAATACTGCACTGGCAGCGAGCTGCACTTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579796.1
CDS CAA 72 bp GCTGCTTGGGTTCGAGTCAATGTGGAGAGCAAGGCTTaGCCATCTTCCTCTTCATCACTTTCTATTTCCCGC +
Preference number: 6 (lower is better)
Translates to: AAWVRVNVESKA*PSSSSSLSISR
Trigger: GCGGGAAATAGAAAGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584387.1
CDS GCA 72 bp CTCTCTCCCAAGTCTTGTTTCTTCAGCCTGATCCCCTaGAAATTCATCACCAACACACAGACCTTGCTACCT +
Preference number: 6 (lower is better)
Translates to: LSPKSCFFSLIP*KFITNTQTLLP
Trigger: AGGTAGCAAGGTCTGTGTGTTGGTGATGAATTTGCAGGGGATCAGGCTGAAGAAACAAGACTTGGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp TTGGGTATAGGTATGGTATCTCTTTTGCACGGCAGCTaGTTGGGTTCGAGTCAATGTGGAGAGCAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: LGIGMVSLLHGS*LGSSQCGEQGF
Trigger: AAAGCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CAA 72 bp ATCCTTGGGAAATTGACTCATCTAGTCCACCAAAACTaGAAACAACATCCAGTGACGGCGGTCGTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: ILGKLTHLVHQN*KQHPVTAVVRS
Trigger: TGAGCGCACGACCGCCGTCACTGGATGTTGTTTCAAGTTTTGGTGGACTAGATGAGTCAATTTCCCAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583410.1
CDS CAA 90 bp CAGAGGTGGCCACAGGAATTCTTCTTCCTGGGCAAGTACTGTATCTaGGTCATCTTTGTATCACTTGTCTCTGATACAGTCTGGCACACC +
Preference number: 6 (lower is better)
Translates to: QRWPQEFFFLGKYCI*VIFVSLVSDTVWHT
Trigger: GGTGTGCCAGACTGTATCAGAGACAAGTGATACAAAGATGACCAAGATACAGTACTTGCCCAGGAAGAAGAATTCCTGTGGCCACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 90 bp CTTATCCTTTTTCCTCATGGTTTGGGTATAGGTATGGTATCTCTTTaGCACGGCAGCTGCTTGGGTTCGAGTCAATGTGGAGAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LILFPHGLGIGMVSL*HGSCLGSSQCGEQG
Trigger: GCCTTGCTCTCCACATTGACTCGAACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACCCAAACCATGAGGAAAAAGGATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CCA 72 bp GTCTTTCTTTCGGTCACCGTCCAGGAGGACTGTAAGTaGAACTCCAAAAATCCCATTGTCTCGTCCTTTTAC +
Preference number: 6 (lower is better)
Translates to: VFLSVTVQEDCK*NSKNPIVSSFY
Trigger: GTAAAAGGACGAGACAATGGGATTTTTGGAGTTCCACTTACAGTCCTCCTGGACGGTGACCGAAAGAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
ENST00000579245.1
ENST00000579689.1
CDS CAA 90 bp CACAGGAATTCTTCTTCCTGGGCAAGTACTGTATCTTGGTCATCTTaGTATCACTTGTCTCTGATACAGTCTGGCACACCATCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: HRNSSSWASTVSWSS*YHLSLIQSGTPSWH
Trigger: ATGCCAGGATGGTGTGCCAGACTGTATCAGAGACAAGTGATACAAAGATGACCAAGATACAGTACTTGCCCAGGAAGAAGAATTCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 90 bp CTTGTTGATTCCACAGCACATTCTCACTTGTCCACTCTGTTCGACTaGGATTTTCTCCCAGTGCAGTATATCAAAGGCAGCAAGTCCCAA +
Preference number: 6 (lower is better)
Translates to: LVDSTAHSHLSTLFD*DFLPVQYIKGSKSQ
Trigger: TTGGGACTTGCTGCCTTTGATATACTGCACTGGGAGAAAATCCAAGTCGAACAGAGTGGACAAGTGAGAATGTGCTGTGGAATCAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 90 bp AGAGCAAGGCTTTGCCATCTTCCTCTTCATCACCTGAGATCAGAGTaGATAAACCCACATCTTGCAGCCATTCTGCTTCAAGTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RARLCHLPLHHLRSE*INPHLAAILLQVLL
Trigger: AAGGAGAACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTGATGAAGAGGAAGATGGCAAAGCCTTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
CDS CAA 90 bp GTCTCTGACATCCCTGATAGATTGCTTATCCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCTCTTTTGCACGGCAGCTGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: VSDIPDRLLILFPHG*GIGMVSLLHGSCLG
Trigger: ACCCAAGCAGCTGCCGTGCAAAAGAGATACCATACCTATACCCAAACCATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS TCA 72 bp TTAGTCTATTTCCCTGGCTTCTCTTGTACCCAACCCTaGGAAGCGGCAGTGTTTCCTCTGTTTCATCCTTTA +
Preference number: 6 (lower is better)
Translates to: LVYFPGFSCTQP*EAAVFPLFHPL
Trigger: TAAAGGATGAAACAGAGGAAACACTGCCGCTTCTCAGGGTTGGGTACAAGAGAAGCCAGGGAAATAGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp ACTTGTCCACTCTGTTCGACTTGGATTTTCTCCCAGTaGAGTATATCAAAGGCAGCAAGTCCCAAACAGAAC +
Preference number: 6 (lower is better)
Translates to: TCPLCSTWIFSQ*SISKAASPKQN
Trigger: GTTCTGTTTGGGACTTGCTGCCTTTGATATACTGCACTGGGAGAAAATCCAAGTCGAACAGAGTGGACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS GCA 72 bp TTTCCATTTAGGAAGGAAAGTGCAGCTCGCTGCCAGTaGAGTATTCTTGGAGCAAGTGGAAAACGGGTTAAT +
Preference number: 6 (lower is better)
Translates to: FPFRKESAARCQ*SILGASGKRVN
Trigger: ATTAACCCGTTTTCCACTTGCTCCAAGAATACTGCACTGGCAGCGAGCTGCACTTTCCTTCCTAAATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579796.1
CDS GCA 72 bp GCATCTGCCAGTACAAACGAGTTTCATTTCTGGACATaGTTATACCATACTCTCCTCCTCTCCTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: ASASTNEFHFWT*LYHTLLLSCSL
Trigger: CAGAGAACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATGAAACTCGTTTGTACTGGCAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581099.5
CDS GCA 72 bp TCATCACCTGAGATCAGAGTTGATAAACCCACATCTTaGAGCCATTCTGCTTCAAGTTCTCCTTCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: SSPEIRVDKPTS*SHSASSSPSGQ
Trigger: TTGGCCAGAAGGAGAACTTGAAGCAGAATGGCTGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581099.5
CDS CAA 72 bp TGCCAATATGTCTTTGGCTTTGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTTGGAGAGAAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: CQYVFGFGLIVE*NGHGHLGEKWS
Trigger: GCTCCACTTCTCTCCAAGGTGTCCATGGCCATTCAACTCAACAATCAAACCAAAGCCAAAGACATATTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CAA 90 bp TTGAAATTTTGCCAATATGTCTTTGGCTTTGGTTTGATTGTTGAGTaGAATGGCCATGGACACCTTGGAGAGAAGTGGAGCATGGACCCG +
Preference number: 6 (lower is better)
Translates to: LKFCQYVFGFGLIVE*NGHGHLGEKWSMDP
Trigger: CGGGTCCATGCTCCACTTCTCTCCAAGGTGTCCATGGCCATTCAACTCAACAATCAAACCAAAGCCAAAGACATATTGGCAAAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS GCA 72 bp AGCCATTCTGCTTCAAGTTCTCCTTATTTCTGGACATaGTTATACCATACTCTCCTCCTCTCCTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SHSASSSPYFWT*LYHTLLLSCSL
Trigger: CAGAGAACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATAAGGAGAACTTGAAGCAGAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419673.6
ENST00000531294.5
CDS CCA 72 bp GTGATTAAGAAAGATGGAACCTTCCACAAAATCTTCTaGTACTTAAGCATTAGGCGGATGATGTGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: VIKKDGTFHKIF*YLSIRRMMWAA
Trigger: TGCGGCCCACATCATCCGCCTAATGCTTAAGTACCAGAAGATTTTGTGGAAGGTTCCATCTTTCTTAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
CDS CAA 72 bp AATGTCATTACTCCTTTGAAGCCTTTGTTGGTAGAGTaGGGAGCCACTCACACTGTCTTCCCAAACACTGTT +
Preference number: 6 (lower is better)
Translates to: NVITPLKPLLVE*GATHTVFPNTV
Trigger: AACAGTGTTTGGGAAGACAGTGTGAGTGGCTCCCAACTCTACCAACAAAGGCTTCAAAGGAGTAATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 72 bp TGTCATAAAAAGGTCTCACATCCTCTCTCCCAAGTCTaGTTTCTTCAGCCTGATCCCCTGCAAATTCATCAC +
Preference number: 6 (lower is better)
Translates to: CHKKVSHPLSQV*FLQPDPLQIHH
Trigger: GTGATGAATTTGCAGGGGATCAGGCTGAAGAAACAAGACTTGGGAGAGAGGATGTGAGACCTTTTTATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 72 bp CTTTGCCATCTTCCTCTTCATCACCTGAGATCAGAGTaGATAAACCCACATCTTGCAGCCATTCTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: LCHLPLHHLRSE*INPHLAAILLQ
Trigger: TTGAAGCAGAATGGCTGCAAGATGTGGGTTTATCAACTCTGATCTCAGGTGATGAAGAGGAAGATGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532723.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
CDS CAA 90 bp TCTTCTTCCTGGGCAAGTACTGTATCTTGGTCATCTTTGTATCACTaGTCTCTGATACAGTCTGGCACACCATCCTGGCATTGCTATAAA +
Preference number: 6 (lower is better)
Translates to: SSSWASTVSWSSLYH*SLIQSGTPSWHCYK
Trigger: TTTATAGCAATGCCAGGATGGTGTGCCAGACTGTATCAGAGACAAGTGATACAAAGATGACCAAGATACAGTACTTGCCCAGGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 90 bp CTCAATTCAAATGTCATTACTCCTTTGAAGCCTTTGTTGGTAGAGTaGGGAGCCACTCACACTGTCTTCCCAAACACTGTTGTGGATACT +
Preference number: 6 (lower is better)
Translates to: LNSNVITPLKPLLVE*GATHTVFPNTVVDT
Trigger: AGTATCCACAACAGTGTTTGGGAAGACAGTGTGAGTGGCTCCCAACTCTACCAACAAAGGCTTCAAAGGAGTAATGACATTTGAATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS TCA 72 bp GTACTGTATCTTGGTCATCTTTGTATCACTTGTCTCTaGTACAGTCTGGCACACCATCCTGGCATTGCTATA +
Preference number: 6 (lower is better)
Translates to: VLYLGHLCITCL*YSLAHHPGIAI
Trigger: TATAGCAATGCCAGGATGGTGTGCCAGACTGTATCAGAGACAAGTGATACAAAGATGACCAAGATACAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 72 bp TCTGTTTCACACTTATCTCTTGATATAAGACAGAGGTaGCCACAGGAATTCTTCTTCCTGGGCAAGTACTGT +
Preference number: 6 (lower is better)
Translates to: SVSHLSLDIRQR*PQEFFFLGKYC
Trigger: ACAGTACTTGCCCAGGAAGAAGAATTCCTGTGGCCACCTCTGTCTTATATCAAGAGATAAGTGTGAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CCA 72 bp CTTATAGCATCTGCCAGTACAAACGAGTTTCATTTCTaGACATGCTTATACCATACTCTCCTCCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: LIASASTNEFHF*TCLYHTLLLSC
Trigger: ACAGGAGAGGAGGAGAGTATGGTATAAGCATGTCCAGAAATGAAACTCGTTTGTACTGGCAGATGCTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581099.5
CDS CAA 72 bp ATCCCTGATAGATTGCTTATCCTTTTTCCTCATGGTTaGGGTATAGGTATGGTATCTCTTTTGCACGGCAGC +
Preference number: 6 (lower is better)
Translates to: IPDRLLILFPHG*GIGMVSLLHGS
Trigger: GCTGCCGTGCAAAAGAGATACCATACCTATACCCAAACCATGAGGAAAAAGGATAAGCAATCTATCAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CAA 72 bp TCTTTATCCTGGGATGCGTCAGACAGGGTAGTACTGTaGAGAGAAGCATCATTTGTCTTGATAACTCTTGGA +
Preference number: 6 (lower is better)
Translates to: SLSWDASDRVVL*REASFVLITLG
Trigger: TCCAAGAGTTATCAAGACAAATGATGCTTCTCTCAACAGTACTACCCTGTCTGACGCATCCCAGGATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531294.5
CDS CAA 90 bp CCTTTAAGACTCAATTCAAATGTCATTACTCCTTTGAAGCCTTTGTaGGTAGAGTTGGGAGCCACTCACACTGTCTTCCCAAACACTGTT +
Preference number: 6 (lower is better)
Translates to: PLRLNSNVITPLKPL*VELGATHTVFPNTV
Trigger: AACAGTGTTTGGGAAGACAGTGTGAGTGGCTCCCAACTCTACCAACAAAGGCTTCAAAGGAGTAATGACATTTGAATTGAGTCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS TCA 72 bp TATATTCCACAGGGAAGAGAGAGGTGGGTAGTTCTCTaGAAAACGCTTTCAACATTACTGCAGCTTCTCTAT +
Preference number: 6 (lower is better)
Translates to: YIPQGRERWVVL*KTLSTLLQLLY
Trigger: ATAGAGAAGCTGCAGTAATGTTGAAAGCGTTTTTCAGAGAACTACCCACCTCTCTCTTCCCTGTGGAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
ENST00000579245.1
ENST00000579689.1
CDS CAA 90 bp TATCCTTTAAGACTCAATTCAAATGTCATTACTCCTTTGAAGCCTTaGTTGGTAGAGTTGGGAGCCACTCACACTGTCTTCCCAAACACT +
Preference number: 6 (lower is better)
Translates to: YPLRLNSNVITPLKP*LVELGATHTVFPNT
Trigger: AGTGTTTGGGAAGACAGTGTGAGTGGCTCCCAACTCTACCAACAAAGGCTTCAAAGGAGTAATGACATTTGAATTGAGTCTTAAAGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262227.7
CDS CAA 90 bp AGGAGATTCACTGACTCCAAAAATGTCTCTGACATCCCTGATAGATaGCTTATCCTTTTTCCTCATGGTTTGGGTATAGGTATGGTATCT +
Preference number: 6 (lower is better)
Translates to: RRFTDSKNVSDIPDR*LILFPHGLGIGMVS
Trigger: AGATACCATACCTATACCCAAACCATGAGGAAAAAGGATAAGCAATCTATCAGGGATGTCAGAGACATTTTTGGAGTCAGTGAATCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000577524.5
ENST00000581099.5
ENST00000584287.5
ENST00000584387.1
CDS CAA 90 bp GAAGGAAAGTGCAGCTCGCTGCCAGTGCAGTATTCTGTTTTCATATaGAAATTTTGCCAATATGTCTTTGGCTTTGGTTTGATTGTTGAG +
Preference number: 6 (lower is better)
Translates to: EGKCSSLPVQYSVFI*KFCQYVFGFGLIVE
Trigger: CTCAACAATCAAACCAAAGCCAAAGACATATTGGCAAAATTTCAATATGAAAACAGAATACTGCACTGGCAGCGAGCTGCACTTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262227.7
ENST00000532996.5
CDS CAA 72 bp CATGATAGCAGCTCTCTCGAGGATATTTTAAGAACTTaGTTGGGGTTTAATCACCCATTCTGCTTGAGGATT +
Preference number: 6 (lower is better)
Translates to: HDSSSLEDILRT*LGFNHPFCLRI
Trigger: AATCCTCAAGCAGAATGGGTGATTAAACCCCAACAAAGTTCTTAAAATATCCTCGAGAGAGCTGCTATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS CCA 72 bp ATAATCAGAGTGTTTGCTTCTACTGAAGAAAAGGTTTaGTGCCATCACTGTAGAAATGTTCCACAGACTCAT +
Preference number: 6 (lower is better)
Translates to: IIRVFASTEEKV*CHHCRNVPQTH
Trigger: ATGAGTCTGTGGAACATTTCTACAGTGATGGCACCAAACCTTTTCTTCAGTAGAAGCAAACACTCTGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262227.7
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
ENST00000532996.5
ENST00000579689.1
CDS CAA 90 bp ATAATACATGATAGCAGCTCTCTCGAGGATATTTTAAGAACTTTGTaGGGGTTTAATCACCCATTCTGCTTGAGGATTTATACGATATAC +
Preference number: 6 (lower is better)
Translates to: IIHDSSSLEDILRTL*GFNHPFCLRIYTIY
Trigger: GTATATCGTATAAATCCTCAAGCAGAATGGGTGATTAAACCCCAACAAAGTTCTTAAAATATCCTCGAGAGAGCTGCTATCATGTATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS CAA 90 bp CATATAATACATGATAGCAGCTCTCTCGAGGATATTTTAAGAACTTaGTTGGGGTTTAATCACCCATTCTGCTTGAGGATTTATACGATA +
Preference number: 6 (lower is better)
Translates to: HIIHDSSSLEDILRT*LGFNHPFCLRIYTI
Trigger: TATCGTATAAATCCTCAAGCAGAATGGGTGATTAAACCCCAACAAAGTTCTTAAAATATCCTCGAGAGAGCTGCTATCATGTATTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS TCA 72 bp GTTAAAGTCAATGCAAGCCTAGGAAAATGTTATTCCTaGAGGACTATCAAGATATCTACAAAACTAACTTGC +
Preference number: 6 (lower is better)
Translates to: VKVNASLGKCYS*RTIKISTKLTC
Trigger: GCAAGTTAGTTTTGTAGATATCTTGATAGTCCTTCAGGAATAACATTTTCCTAGGCTTGCATTGACTTTAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579796.1
CDS CCA 72 bp AGGATTTATACGATATACATCCAATATATAAGCATCTaGATCCAAGCAATGCTCTCCTATATTTCCTCCAAT +
Preference number: 6 (lower is better)
Translates to: RIYTIYIQYISI*IQAMLSYISSN
Trigger: ATTGGAGGAAATATAGGAGAGCATTGCTTGGATCCAGATGCTTATATATTGGATGTATATCGTATAAATCCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314319.7
ENST00000383472.9
ENST00000419673.6
ENST00000531294.5
CDS CAA 72 bp GAACTACAGCATAATGTCACAATCAGGATACTGATATaGATACAACCTACCTATCTTATTCAGATTTCCAAG +
Preference number: 6 (lower is better)
Translates to: ELQHNVTIRILI*IQPTYLIQISK
Trigger: CTTGGAAATCTGAATAAGATAGGTAGGTTGTATCAATATCAGTATCCTGATTGTGACATTATGCTGTAGTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579796.1