Pregenerated sensors for ARHGAP26-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000230789Ensembl transcript IDs: ENST00000433186.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTGATTTCACTGCAGGGCAGGCATGTGATCCAGGCTGGCCACAGTaGTCAGTGTGGACAACTGACCCTTGTTCATCTGTGGAGTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: ADFTAGQACDPGWPQ*SVWTTDPCSSVESN Trigger: GTTAGACTCCACAGATGAACAAGGGTCAGTTGTCCACACTGACCACTGTGGCCAGCCTGGATCACATGCCTGCCCTGCAGTGAAATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433186.1 |
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| CDS CCA 90 bp | ACTGCAGGGCAGGCATGTGATCCAGGCTGGCCACAGTGGTCAGTGTaGACAACTGACCCTTGTTCATCTGTGGAGTCTAACAAAGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAGQACDPGWPQWSV*TTDPCSSVESNKVV Trigger: CACTACTTTGTTAGACTCCACAGATGAACAAGGGTCAGTTGTCCACACTGACCACTGTGGCCAGCCTGGATCACATGCCTGCCCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433186.1 |
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| CDS CCA 90 bp | TGTTCATCTGTGGAGTCTAACAAAGTAGTGCCCCCTTATCCTCGGTaGTTATGTTCCAAGATGCCCAGTGGATGCCTTCAAAGTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSVESNKVVPPYPR*LCSKMPSGCLQSPQ Trigger: CTGGGGACTTTGAAGGCATCCACTGGGCATCTTGGAACATAACCACCGAGGATAAGGGGGCACTACTTTGTTAGACTCCACAGATGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433186.1 |
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| CDS CCA 72 bp | ACTGCAGGGCAGGCATGTGATCCAGGCTGGCCACAGTaGTCAGTGTGGACAACTGACCCTTGTTCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TAGQACDPGWPQ*SVWTTDPCSSV Trigger: CACAGATGAACAAGGGTCAGTTGTCCACACTGACCACTGTGGCCAGCCTGGATCACATGCCTGCCCTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433186.1 |
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| CDS CCA 72 bp | GTGGAGTCTAACAAAGTAGTGCCCCCTTATCCTCGGTaGTTATGTTCCAAGATGCCCAGTGGATGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VESNKVVPPYPR*LCSKMPSGCLQ Trigger: TTGAAGGCATCCACTGGGCATCTTGGAACATAACCACCGAGGATAAGGGGGCACTACTTTGTTAGACTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433186.1 |
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