RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP26 (Homo sapiens)

Ensembl gene IDs: ENSG00000145819

Ensembl transcript IDs: ENST00000274498.9, ENST00000378013.2, ENST00000418236.5, ENST00000419676.5, ENST00000421521.5, ENST00000424007.1, ENST00000425417.2, ENST00000443045.1, ENST00000443674.5, ENST00000451259.1, ENST00000461314.5, ENST00000464838.1, ENST00000469131.6, ENST00000469396.5, ENST00000475287.2, ENST00000477867.6, ENST00000486650.1, ENST00000489924.1, ENST00000642734.1, ENST00000645625.1, ENST00000645722.2, ENST00000646213.1

Found 1361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAG +
Preference number: 1 (lower is better)
Translates to: LGDGWQPLVAERFLA*EGETQGVCVPVHEK
Trigger: CTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR GCA 90 bp TGGGCAAACTCTGGGTGCCATGGTGGCCACTGCTGTCTCCGGGAGTaGCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGC +
Preference number: 1 (lower is better)
Translates to: WANSGCHGGHCCLRE*HVHKTQSSRLAFGS
Trigger: GCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp TGGTTTGGTTTTAGAGTAGGTTGGGTTGCCGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: WFGFRVGWVAVVTRR*MAALGGREVPSLGG
Trigger: CCCTCCCAGGCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAACCCAACCTACTCTAAAACCAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 90 bp CCGGGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTaGGAGCAGAAGCCAGAGGATGACAGGTGCCAACAGACAGGCAGG +
Preference number: 1 (lower is better)
Translates to: PGVPCPQNSVIQTCF*EQKPEDDRCQQTGR
Trigger: CCTGCCTGTCTGTTGGCACCTGTCATCCTCTGGCTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 90 bp TTCCAAGCAGTGAAGCTGGGGCCAAATGTCTACAGGGATGCTTCGTaGGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACA +
Preference number: 1 (lower is better)
Translates to: FQAVKLGPNVYRDAS*GTPKARILAFCSST
Trigger: TGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTTGGCCCCAGCTTCACTGCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 90 bp TCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTaGAGCTGGGGCCAAATGTCTACAGGGATGCTTCGTGAGGCACCC +
Preference number: 1 (lower is better)
Translates to: SNQSQLKREGHASKQ*SWGQMSTGMLREAP
Trigger: GGGTGCCTCACGAAGCATCCCTGTAGACATTTGGCCCCAGCTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp GACATGCTTCCAAGCAGTGAAGCTGGGGCCAAATGTCTACAGGGATaGTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTC +
Preference number: 1 (lower is better)
Translates to: DMLPSSEAGAKCLQG*FVRHPQSKDLGLLF
Trigger: GAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTTGGCCCCAGCTTCACTGCTTGGAAGCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp TTGAGCCGCAGGTATGGCACACACAACTCTGCAGCTCTGGGCAAGTaGCTTGGGATGCCCTTGTCACTAGTATGGCTCTGTCCTGCTAAT +
Preference number: 1 (lower is better)
Translates to: LSRRYGTHNSAALGK*LGMPLSLVWLCPAN
Trigger: ATTAGCAGGACAGAGCCATACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGCAGAGTTGTGTGTGCCATACCTGCGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp GCTACCTACTTGGGGAACATGGTTGCTCACAAAACATTCAGTACTTaGGCAAACTCTGGGTGCCATGGTGGCCACTGCTGTCTCCGGGAG +
Preference number: 1 (lower is better)
Translates to: ATYLGNMVAHKTFST*ANSGCHGGHCCLRE
Trigger: CTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp TGCTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATGGTaGCCACTGCTGTCTCCGGGAGTGCCATGTCCACAAAACTCAGTC +
Preference number: 1 (lower is better)
Translates to: CSQNIQYLGKLWVPW*PLLSPGVPCPQNSV
Trigger: GACTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp GGTTGCTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATaGTGGCCACTGCTGTCTCCGGGAGTGCCATGTCCACAAAACTCA +
Preference number: 1 (lower is better)
Translates to: GCSQNIQYLGKLWVP*WPLLSPGVPCPQNS
Trigger: TGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 90 bp CCATTTTCAGCTGATAGAAACTCAGGGGATAGAAGGCCTTCCCTTTaGGCCGCAGGTATGGCACACACAACTCTGCAGCTCTGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: PFSADRNSGDRRPSL*AAGMAHTTLQLWAS
Trigger: ACTTGCCCAGAGCTGCAGAGTTGTGTGTGCCATACCTGCGGCTCAAAGGGAAGGCCTTCTATCCCCTGAGTTTCTATCAGCTGAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp AAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATGGTGGCCACTaGTGTCTCCGGGAGTGCCATGTCCACAAAACTCAGTCATCCAGA +
Preference number: 1 (lower is better)
Translates to: KTFSTWANSGCHGGH*CLRECHVHKTQSSR
Trigger: TCTGGATGACTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp AACATGGTTGCTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTaGCATGGTGGCCACTGCTGTCTCCGGGAGTGCCATGTCCACAAA +
Preference number: 1 (lower is better)
Translates to: NMVAHKTFSTWANSG*HGGHCCLRECHVHK
Trigger: TTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp GAGGCTGTTTGGTTTCTGCAGCGCTGGCTACCTACTTGGGGAACATaGTTGCTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTGCC +
Preference number: 1 (lower is better)
Translates to: EAVWFLQRWLPTWGT*LLTKHSVLGQTLGA
Trigger: GGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCAAACAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp GTGTCAGCGAACTCTGCCATGACTCCTAGAGACCACAGGAAGGCTTaGGTAAGGTCTCTCACTCACTCAACCAAACTTTCCTCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: VSANSAMTPRDHRKA*VRSLTHSTKLSSCS
Trigger: AGAGCAGGAGGAAAGTTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR GCA 90 bp GTTTCTCCCGATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATaGTTCCAAGCAGTGAAGCTGGGGCCAAATGTCTACAGGGATGCT +
Preference number: 1 (lower is better)
Translates to: VSPDFKSEPTQEGGT*FQAVKLGPNVYRDA
Trigger: AGCATCCCTGTAGACATTTGGCCCCAGCTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATCGGGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp CTGTTTGGTTTCTGCAGCGCTGGCTACCTACTTGGGGAACATGGTTaGTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATGG +
Preference number: 1 (lower is better)
Translates to: LFGFCSAGYLLGEHG*SQNIQYLGKLWVPW
Trigger: CCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp TTGTCTCAGGCATGCTGTGGGGCTGTGCAAGATTCGCTGCTCTGCTaGTGTTGTCATTTTGATGCTACAATTACAGAGAGGCGGTTCAGC +
Preference number: 1 (lower is better)
Translates to: LSQACCGAVQDSLLC*CCHFDATITERRFS
Trigger: GCTGAACCGCCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp GTCTTGTCTCAGGCATGCTGTGGGGCTGTGCAAGATTCGCTGCTCTaGTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGCGGTTC +
Preference number: 1 (lower is better)
Translates to: VLSQACCGAVQDSLL*CCCHFDATITERRF
Trigger: GAACCGCCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp CTGGAGTCTTCATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAAC +
Preference number: 1 (lower is better)
Translates to: LESSCTASSGLSKSK*RFGWQGTKLTRRLN
Trigger: GTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGAAGACTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR TCA 90 bp TCTTTAAAGTTCCCTAACAAGGAATTCCAGAAACAGGAAACACTCTaGAGCAACGCTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGT +
Preference number: 1 (lower is better)
Translates to: SLKFPNKEFQKQETL*SNAAIQGAPGELDG
Trigger: ACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGTGTTTCCTGTTTCTGGAATTCCTTGTTAGGGAACTTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 90 bp TGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCG +
Preference number: 1 (lower is better)
Translates to: WVNVIEDRACCERKF*VMFSFAGIQGFCLP
Trigger: CGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
3UTR GCA 90 bp GTCATCCAGACTTGCTTTTGGGAGCAGAAGCCAGAGGATGACAGGTaGCAACAGACAGGCAGGGATCAGGTTATCTTTGGCTTCTTCTTT +
Preference number: 1 (lower is better)
Translates to: VIQTCFWEQKPEDDR*QQTGRDQVIFGFFF
Trigger: AAAGAAGAAGCCAAAGATAACCTGATCCCTGCCTGTCTGTTGGCACCTGTCATCCTCTGGCTTCTGCTCCCAAAAGCAAGTCTGGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp TTGGAGTCTTGTCTCAGGCATGCTGTGGGGCTGTGCAAGATTCGCTaGTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: LESCLRHAVGLCKIR*SAAVVILMLQLQRG
Trigger: GCCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACAAGACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp TCTGCAGCTCTGGGCAAGTGCCTTGGGATGCCCTTGTCACTAGTATaGCTCTGTCCTGCTAATGCCAGTCTGTCAATACTTGATTGTTCA +
Preference number: 1 (lower is better)
Translates to: SAALGKCLGMPLSLV*LCPANASLSILDCS
Trigger: TGAACAATCAAGTATTGACAGACTGGCATTAGCAGGACAGAGCCATACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp GTCTTACAAAGGAAACTGGAGGCTACTGGGAAAGCTCAGGGATCCTaGGCCATGGTCTTCCACTCTGATAACCAATTCATTCTCCTCATC +
Preference number: 1 (lower is better)
Translates to: VLQRKLEATGKAQGS*AMVFHSDNQFILLI
Trigger: GATGAGGAGAATGAATTGGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCTGAGCTTTCCCAGTAGCCTCCAGTTTCCTTTGTAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp TGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATaGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTA +
Preference number: 1 (lower is better)
Translates to: CTASSGLSKSKCRFG*QGTKLTRRLNNGIL
Trigger: TAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR CCA 90 bp TTCATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTaGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAAT +
Preference number: 1 (lower is better)
Translates to: FMYRFFWPVKKQVQV*MAGNKVDEEAEQRN
Trigger: ATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR TCA 90 bp GGATCTTGGCCTTCTGTTCCTCCACATGAGCTCCAGGTAAGTTTATaGTGGGACAGATTACAACTTCAAACATCAAATGTGGTCGGCCGC +
Preference number: 1 (lower is better)
Translates to: GSWPSVPPHELQVSL*WDRLQLQTSNVVGR
Trigger: GCGGCCGACCACATTTGATGTTTGAAGTTGTAATCTGTCCCATCATAAACTTACCTGGAGCTCATGTGGAGGAACAGAAGGCCAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp AGTCACGCTGCATTTCTCAGTGGCAAAGAGAAATGGCCTCGACACTaGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTC +
Preference number: 1 (lower is better)
Translates to: SHAAFLSGKEKWPRH*NQQLSWIPCKAQQF
Trigger: GAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 90 bp GACCTTAATACCCCTAAAAGATTCAGGCTATGGCTAAGTGATCCCTaGGTCTTACAAAGGAAACTGGAGGCTACTGGGAAAGCTCAGGGA +
Preference number: 1 (lower is better)
Translates to: DLNTPKRFRLWLSDP*VLQRKLEATGKAQG
Trigger: TCCCTGAGCTTTCCCAGTAGCCTCCAGTTTCCTTTGTAAGACCCAGGGATCACTTAGCCATAGCCTGAATCTTTTAGGGGTATTAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 90 bp AAATTTGTTAGACACCAGCACAGGGTGGGTGAGAAGACATCCTGCTaGCTTTATAAAGTGATGTGGGGCAGGGTTGTCGAGGTAAGTGAT +
Preference number: 1 (lower is better)
Translates to: KFVRHQHRVGEKTSC*LYKVMWGRVVEVSD
Trigger: ATCACTTACCTCGACAACCCTGCCCCACATCACTTTATAAAGTCAGCAGGATGTCTTCTCACCCACCCTGTGCTGGTGTCTAACAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp AGCAACAGAGTCAGTCACGCTGCATTTCTCAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAA +
Preference number: 1 (lower is better)
Translates to: SNRVSHAAFLSGKEK*PRHWNQQLSWIPCK
Trigger: TTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 90 bp ATGCTACAATTACAGAGAGGCGGTTCAGCACCCAGCCGATCGGTGTaGCTGCCAAACACATTTGAGCATGACAAGATAAATTTGTTAGAC +
Preference number: 1 (lower is better)
Translates to: MLQLQRGGSAPSRSV*LPNTFEHDKINLLD
Trigger: GTCTAACAAATTTATCTTGTCATGCTCAAATGTGTTTGGCAGCCACACCGATCGGCTGGGTGCTGAACCGCCTCTCTGTAATTGTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 90 bp AATTATTACTTGTTGGAGTCTTGTCTCAGGCATGCTGTGGGGCTGTaGAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAA +
Preference number: 1 (lower is better)
Translates to: NYYLLESCLRHAVGL*KIRCSAAVVILMLQ
Trigger: TTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACAAGACTCCAACAAGTAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 90 bp TTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATaGCATTCACATGTGGAAGATACGGATAACTCTGTTGTTTGCAGG +
Preference number: 1 (lower is better)
Translates to: LTVHRFVVCLESPLQ*HSHVEDTDNSVVCR
Trigger: CCTGCAAACAACAGAGTTATCCGTATCTTCCACATGTGAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 90 bp GTACTCATCCCACCCTCCAACCTTGGGTTTCTTCCTGAATCACAATaGCCTATATTAGTCTCAAGCCTTGAAAGACTGAGAAATAATTCC +
Preference number: 1 (lower is better)
Translates to: VLIPPSNLGFLPESQ*PILVSSLERLRNNS
Trigger: GGAATTATTTCTCAGTCTTTCAAGGCTTGAGACTAATATAGGCCATTGTGATTCAGGAAGAAACCCAAGGTTGGAGGGTGGGATGAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 90 bp AAATCTTTAGTCTTCAAGTTCCTTCCTACTCATTGGCTCATATTCTaGAGTTTATCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: KSLVFKFLPTHWLIF*SLSSFVANRKEGSL
Trigger: CAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGATAAACTTCAGAATATGAGCCAATGAGTAGGAAGGAACTTGAAGACTAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 90 bp AATCAACAGATGTGCATTGTCAGATACAAGGTTGATTCTGGCATCTaGATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTA +
Preference number: 1 (lower is better)
Translates to: NQQMCIVRYKVDSGI*ITKKAAFRCLDNFV
Trigger: TACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTATCCAGATGCCAGAATCAACCTTGTATCTGACAATGCACATCTGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTGGGGCTGGCCAGTGGTaGGTTAGAGGCAGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCGAGQW*VRGRQG
Trigger: CCCTTGCCTGCCTCTAACCCACCACTGGCCAGCCCC...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 2 (lower is better)
Translates to: AVVTRRWMAALGGREVPSLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 2 (lower is better)
Translates to: AVVTRRWMAALGGREVPSRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LREAPPKQGSWPSVPPHEERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: AVVTRRWMAALGGREVPSQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCAAATGGCCTCGACACTaGAATCAGCAGTTGTCATGG +
Preference number: 2 (lower is better)
Translates to: AVVTRRWMAALGGREVPSKWPRH*NQQLSW
Trigger: CCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp GCTGTGGGGCTGTGCAAGATTCGCTGCTCTGCTGCTGTTGTCATTTaGATGCTACAATTACAGAGAGGCGGTTCAGCACCCAGCCGATCG +
Preference number: 2 (lower is better)
Translates to: AVGLCKIRCSAAVVI*MLQLQRGGSAPSRS
Trigger: CGATCGGCTGGGTGCTGAACCGCCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 2 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTACGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 2 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCATTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp AAACACTCTGAAGCAACGCTGCCATCCAAGGGGCTCCTGGGGAGCTaGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAA +
Preference number: 2 (lower is better)
Translates to: KHSEATLPSKGLLGS*TVHRFVVCLESPLQ
Trigger: TTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGCTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 2 (lower is better)
Translates to: AMDPAWISAPISSPSPSRLSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: AVVTRRWMAALGGREVPSGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATaGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTG +
Preference number: 2 (lower is better)
Translates to: GETQGVCVPVHEKTG*YLTDDRPTAALEMV
Trigger: CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp AAGACCGTGCCTGCTGTGAACGAAAGTTCTGAGTCATGTTCAGCTTaGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KTVPAVNESSESCSA*QAYKAFAFRNGVLE
Trigger: CTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
3UTR-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 2 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAAGTGGGCAGATCACTTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: SSFVANRKEGSLAGQRETSGQIT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAAGTGATCTGCCCACT...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR GCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: GGHGETSQMASPIGRQHLQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: LLRWVNVIEDRACCERKFGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...GAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
3UTR-3UTR GCA 90 bp CTCCAACCAGCCAGGCTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: LQPARLLRWVNVIEDRACSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...GCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGCTGGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
3UTR-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCGGGAAACCAGTCAGATaGCATCACCCATTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTGKPVR*HHPLGG
Trigger: GCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCC...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: SSFVANRKEGSLAGQRETVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp GCTGTTTGGTTTCTGCAGCGCTGGCTACCTACTTGGGGAACATGGTaGCTCACAAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATG +
Preference number: 2 (lower is better)
Translates to: AVWFLQRWLPTWGTW*LTKHSVLGQTLGAM
Trigger: CATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGCTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 2 (lower is better)
Translates to: LREAPPKQGSWPSVPPHELSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 2 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp CCAGTGTCAGCGAACTCTGCCATGACTCCTAGAGACCACAGGAAGGCTTGGGTATACAGAATTGTTAGGTaGCAGGTGGCAGGTTGGATT +
Preference number: 2 (lower is better)
Translates to: PVSANSAMTPRDHRKAWVYRIVR*QVAGWI
Trigger: AATCCAACCTGCCACCTGTCACCTAACAATTCTGTA...TACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR-3UTR GCA 90 bp CAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGTGCCATGGTGGCCACTaGTGTCTCCGGGAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: QDSLLCCCCHFDATITERCHGGH*CLRECH
Trigger: ATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCA...CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp ATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTaGTCTAGAGTCACCCTTGCAATGACATTCACATGTGGAAGATAC +
Preference number: 2 (lower is better)
Translates to: IQGAPGELDGPSVCS*SRVTLAMTFTCGRY
Trigger: GTATCTTCCACATGTGAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 2 (lower is better)
Translates to: LREAPPKQGSWPSVPPHEQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 2 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAAAACAGGAAACACTCTaGAGCAACGCTGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: SSFVANRKEGSLAGQRETKQETL*SNAAIQ
Trigger: TTGGATGGCAGCGTTGCTTCAGAGTGTTTCCTGTTT...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCTTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 2 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp TTAGGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTAAAGATCACTCTCGCTaGTCTGTAAAGAGGGGGTTA +
Preference number: 2 (lower is better)
Translates to: LGDRWQVGFDGQVIVCRPKDHSR*SVKRGL
Trigger: TAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTT...AGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
3UTR-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 2 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACCCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 2 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGTGTCTCGCTTGCTCCTaGGTGAGTTCCCGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKCLACS*VSSRKR
Trigger: TCTTTTCCGGGAACTCACCCAGGAGCAAGCGAGACA...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTAGGGATCCTGGGCCATaGTCTTCCACTCTGATAACC +
Preference number: 2 (lower is better)
Translates to: FHWKTTFQQGLALNDTWIRDPGP*SSTLIT
Trigger: GGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCT...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp CGATCGGTGTGGCTGCCAAACACATTTGAGCATGACAAGATAAATTaGTTAGACACCAGCACAGGGTGGGTGAGAAGACATCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RSVWLPNTFEHDKIN*LDTSTGWVRRHPAD
Trigger: GTCAGCAGGATGTCTTCTCACCCACCCTGTGCTGGTGTCTAACAAATTTATCTTGTCATGCTCAAATGTGTTTGGCAGCCACACCGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCTATTCAGGGTACTCATaGGAAAACGGCTTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: TKAMDPAWISAPISSPSPYSGYS*ENGFAS
Trigger: ACTTGCAAAGCCGTTTTCTCATGAGTACCCTGAATA...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGAGTAGTGAATCACCATaGCAAACCCCTGTTAACTTT +
Preference number: 2 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQSSESP*QTPVNF
Trigger: AAAGTTAACAGGGGTTTGTCATGGTGATTCACTACT...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp TTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGATGGTAACTGCTTGCTaGACTCGCATGAACCCTTGT +
Preference number: 2 (lower is better)
Translates to: LTRRLNNGILPSQQYPGMMVTAC*TRMNPC
Trigger: ACAAGGGTTCATGCGAGTTCAGCAAGCAGTTACCAT...CATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGCCTCTTCATCCTGCATaGAAACAGATCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVPLHPA*KQIQLP
Trigger: AGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGG...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCCCTCTTCATCCTGCATaGAAACAGATCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFPLHPA*KQIQLP
Trigger: AGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGG...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 2 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 2 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTATTCAGGGTACTCATaGGAAAACGGCTTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLYSGYS*ENGFAS
Trigger: ACTTGCAAAGCCGTTTTCTCATGAGTACCCTGAATA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 2 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 2 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 2 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTAATTCCTTGATCCTGTaGTTCAAGTTGTTAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCNSLIL*FKLLEN
Trigger: GTTTTCTAACAACTTGAAGCACAGGATCAAGGAATT...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCGATAACTCTGTTGTTTaGAGGCCAAGTGAATTTGAA +
Preference number: 2 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVDNSVV*RPSEFE
Trigger: TTCAAATTCACTTGGCCTGCAAACAACAGAGTTATC...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp TTTGGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTAACAGTATCCTGGCATaGCGTAGACATGGTAACTGC +
Preference number: 2 (lower is better)
Translates to: FGWQGTKLTRRLNNGILPNSILA*RRHGNC
Trigger: GCAGTTACCATGTCTACGGCATGCCAGGATACTGTT...AGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCCCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 2 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 2 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 2 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGAGATGGTGAGAGATTaGATCTTATATAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLEMVRD*ILYKQC
Trigger: ACACTGTTTATATAAGATCCAATCTCTCACCATCTC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCAGAGGCAGGCAAGGGTaGGAGCAGAGATGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPRGRQG*EQRWVN
Trigger: ATTCACCCATCTCTGCTCCCACCCTTGCCTGCCTCT...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGAAAAACTCATTGCCTaGAGATGCTCTTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKEKLIA*RCSSHL
Trigger: GAGATGGGAAGAGCATCTCCAGGCAATGAGTTTTTC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACGGAAGGAGGGGAGCCTaGCTGGGCAAAGGGAAACAG +
Preference number: 2 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDGRRGA*LGKGKQ
Trigger: CTGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCC...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp CAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGCGCTGGCTACCTACTTaGGGAACATGGTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: QDSLLCCCCHFDATITERRWLPT*GTWLLT
Trigger: TGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCG...CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACTTTTCTTGCAGTACTaGTGCATGTTGGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTLFLQY*CMLAEM
Trigger: CATCTCAGCCAACATGCATCAGTACTGCAAGAAAAG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 2 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCAAAGACTGAACACCACTaGTGTGTCGTGCCCACCAAC +
Preference number: 2 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSKTEHH*CVVPTN
Trigger: GTTGGTGGGCACGACACATCAGTGGTGTTCAGTCTT...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCAAGTGGGCAGATCACTTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSSGQIT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAAGTGATCTGCCCACT...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GGGAATTTGAAAGGTCACTGGCAAGGCTGGTTAAAAGCAGACCAGTGTCAGCGAAACATGAAGAAGGCATaGGGCTGTAGTATGTCAAGT +
Preference number: 2 (lower is better)
Translates to: GNLKGHWQGWLKADQCQRNMKKA*GCSMSS
Trigger: ACTTGACATACTACAGCCTCATGCCTTCTTCATGTT...TCGCTGACACTGGTCTGCTTTTAACCAGCCTTGCCAGTGACCTTTCAAATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR-3UTR GCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCAATTCCTTGATCCTGTaGTTCAAGTTGTTAGAAAAC +
Preference number: 2 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPNSLIL*FKLLEN
Trigger: GTTTTCTAACAACTTGAAGCACAGGATCAAGGAATT...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 2 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGAATCTATACCCCTCCTaGAGTCTTCCTCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKNLYPS*SLPLLL
Trigger: CAAAAGAAGAGGAAGACTCCAGGAGGGGTATAGATT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGAGGTTACTAGGGTGTaGTCCAAATATATTCCGATG +
Preference number: 2 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTEVTRV*SKYIPM
Trigger: CATCGGAATATATTTGGAGCACACCCTAGTAACCTC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp ATACACCTGAGAAGAAAGACAAAAACTCGAATGCCTGACCCCACTTATTTAAATACTCTGAAGCAACGCTaGCATCCAAGGGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: IHLRRKTKTRMPDPTYLNTLKQR*HPRGSW
Trigger: CCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGT...ATTTAAATAAGTGGGGTCAGGCATTCGAGTTTTTGTCTTTCTTCTCAGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGTTCATTCTTTCTCTTTaGCTCTCACCGAAAAGCACT +
Preference number: 2 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKFILSL*LSPKST
Trigger: AGTGCTTTTCGGTGAGAGGCAAAGAGAAAGAATGAA...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 2 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTATCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 2 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTAAAACATTCAGTACTTaGGCAAACTCTGGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: FHWKTTFQQGLALNDTWIKTFST*ANSGCH
Trigger: ATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTT...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp ATGTGGAAGATACGGATAACTCTGTTGTTTGCAGGCCAAGTGAATTaGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: MWKIRITLLFAGQVN*KSPGSTSPSKTVFH
Trigger: GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGCAAACAACAGAGTTATCCGTATCTTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp CTGAGCTTCATCTTACTACTAAGTAGGCATTCTTTGAAAAACTCATaGCCTGGAGATGCTCTTCCCATCTCCAAATCCAAAGCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: LSFILLLSRHSLKNS*PGDALPISKSKAQG
Trigger: CCCTTGGGCTTTGGATTTGGAGATGGGAAGAGCATCTCCAGGCAATGAGTTTTTCAAAGAATGCCTACTTAGTAGTAAGATGAAGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp CTCCTGCTCTCAACAATACCTATAGGATTTATGATGACGACCATGTaGTATGTGGGAGCAGTTACAGAATTGTTAGGTGACAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLLSTIPIGFMMTTM*YVGAVTELLGDRWQ
Trigger: CTGCCACCTGTCACCTAACAATTCTGTAACTGCTCCCACATACAACATGGTCGTCATCATAAATCCTATAGGTATTGTTGAGAGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR-3UTR TCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 2 (lower is better)
Translates to: WILYKQCFNPLHPACKQIGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 2 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGGAGCTGTATAATCCTTaGGCTGATAAACTGAGTAGT +
Preference number: 2 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKELYNP*ADKLSS
Trigger: ACTACTCAGTTTATCAGCTCAAGGATTATACAGCTC...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR GCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGCCAAAGCCCAAGGGATaGTTAAAAACACATAAAGAC +
Preference number: 2 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKPKPKG*LKTHKD
Trigger: GTCTTTATGTGTTTTTAAGCATCCCTTGGGCTTTGG...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAACTTCCTGAATCACAATaGCCTATATTAGTCTCAAGC +
Preference number: 2 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKLPESQ*PILVSS
Trigger: GCTTGAGACTAATATAGGCCATTGTGATTCAGGAAG...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 90 bp CACCCTTGCAATGACATTCACATGTGGAAGATACGGATAACTCTGTaGTTTGCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCC +
Preference number: 2 (lower is better)
Translates to: HPCNDIHMWKIRITL*FAGQVNLKSPGSTS
Trigger: GGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGCAAACAACAGAGTTATCCGTATCTTCCACATGTGAATGTCATTGCAAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACTATTCAGGGTACTCATaGGAAAACGGCTTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHYSGYS*ENGFAS
Trigger: ACTTGCAAAGCCGTTTTCTCATGAGTACCCTGAATA...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RDWILYKQCFNPLHPACKGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 2 (lower is better)
Translates to: WILYKQCFNPLHPACKQILTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp TCTCACTCACTCAACCAAACTTTCCTCCTGCTCTCAACAATACCTATAGGATTTCCTTGCTTGAGAACATaGAGAAGGCATGAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: SHSLNQTFLLLSTIPIGFPCLRT*RRHEAV
Trigger: TACAGCCTCATGCCTTCTTCATGTTCTCAAGCAAGG...AAATCCTATAGGTATTGTTGAGAGCAGGAGGAAAGTTTGGTTGAGTGAGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR-3UTR GCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACCCTCTTCATCCTGCATaGAAACAGATCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDPLHPA*KQIQLP
Trigger: AGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGG...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGATAACTCTGTTGTTTaGAGGCCAAGTGAATTTGAA +
Preference number: 2 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTDNSVV*RPSEFE
Trigger: TTCAAATTCACTTGGCCTGCAAACAACAGAGTTATC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 2 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCGAGATGGTGAGAGATTaGATCTTATATAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTEMVRD*ILYKQC
Trigger: ACACTGTTTATATAAGATCCAATCTCTCACCATCTC...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCTTCCTGAATCACAATaGCCTATATTAGTCTCAAGC +
Preference number: 2 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFLPESQ*PILVSS
Trigger: GCTTGAGACTAATATAGGCCATTGTGATTCAGGAAG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTCACTCAACCAAACTTTCCTCCTGCTCTCAACAATACCTATAGGATTTATGATTTGTTAGGTGACAGGTaGCAGGTTGGATTTGACGGG +
Preference number: 2 (lower is better)
Translates to: LTQPNFPPALNNTYRIYDLLGDR*QVGFDG
Trigger: CCCGTCAAATCCAACCTGCCACCTGTCACCTAACAA...ATCATAAATCCTATAGGTATTGTTGAGAGCAGGAGGAAAGTTTGGTTGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR CAA 90 bp CTGCTAATGCCAGTCTGTCAATACTTGATTGTTCATTCTTTCTCTTaGCCTCTCACCGAAAAGCACTCGGTGAGAGGAAATGAACTGATA +
Preference number: 2 (lower is better)
Translates to: LLMPVCQYLIVHSFS*PLTEKHSVRGNELI
Trigger: TATCAGTTCATTTCCTCTCACCGAGTGCTTTTCGGTGAGAGGCAAAGAGAAAGAATGAACAATCAAGTATTGACAGACTGGCATTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 2 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp CAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGCCAAAGCCCAAGGGATaGTTAAAAACACATAAAGAC +
Preference number: 2 (lower is better)
Translates to: QDSLLCCCCHFDATITERPKPKG*LKTHKD
Trigger: GTCTTTATGTGTTTTTAAGCATCCCTTGGGCTTTGG...CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGAGATGGTGAGAGATTaGATCTTATATAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFEMVRD*ILYKQC
Trigger: ACACTGTTTATATAAGATCCAATCTCTCACCATCTC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACATCCAGACTTGCTTTTaGGAGCAGAAGCCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDIQTCF*EQKPED
Trigger: ATCCTCTGGCTTCTGCTCCCAAAAGCAAGTCTGGAT...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 90 bp TTAGGATGGTTCACCTTTCTCTTTCTCTCTAGTCCTGGTGTTACTTaGCATCCAACACTTTTTCCTCTCAATAATACAGGTGCTTCCACT +
Preference number: 2 (lower is better)
Translates to: LGWFTFLFLSSPGVT*HPTLFPLNNTGAST
Trigger: AGTGGAAGCACCTGTATTATTGAGAGGAAAAAGTGTTGGATGCAAAGTAACACCAGGACTAGAGAGAAAGAGAAAGGTGAACCATCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp CAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGAATGACATTCACATGTaGAAGATACGGATAACTCTG +
Preference number: 2 (lower is better)
Translates to: QDSLLCCCCHFDATITERNDIHM*KIRITL
Trigger: CAGAGTTATCCGTATCTTCCACATGTGAATGTCATT...CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR TCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 2 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR GCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: RDWILYKQCFNPLHPACKQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 2 (lower is better)
Translates to: WILYKQCFNPLHPACKQIQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 2 (lower is better)
Translates to: RDWILYKQCFNPLHPACKLSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR TCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACCTCGGTGAGAGGAAATaGACTGATATTCAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDLGERK*TDIQKD
Trigger: GTCTTTTTGAATATCAGTTCATTTCCTCTCACCGAG...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATGAGATGGTGAGAGATTaGATCTTATATAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYEMVRD*ILYKQC
Trigger: ACACTGTTTATATAAGATCCAATCTCTCACCATCTC...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 72 bp GGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGTGTGTGTGTTCCCGTG +
Preference number: 3 (lower is better)
Translates to: GWQPLVAERFLA*EGETQGVCVPV
Trigger: CACGGGAACACACACACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR GCA 72 bp CCAAGCAGTGAAGCTGGGGCCAAATGTCTACAGGGATaGTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGC +
Preference number: 3 (lower is better)
Translates to: PSSEAGAKCLQG*FVRHPQSKDLG
Trigger: GCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTTGGCCCCAGCTTCACTGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp TCTGGGTGCCATGGTGGCCACTGCTGTCTCCGGGAGTaGCATGTCCACAAAACTCAGTCATCCAGACTTGCT +
Preference number: 3 (lower is better)
Translates to: SGCHGGHCCLRE*HVHKTQSSRLA
Trigger: AGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp AGTACTTGGGCAAACTCTGGGTGCCATGGTGGCCACTaGTGTCTCCGGGAGTGCCATGTCCACAAAACTCAG +
Preference number: 3 (lower is better)
Translates to: STWANSGCHGGH*CLRECHVHKTQ
Trigger: CTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp TGGCACACACAACTCTGCAGCTCTGGGCAAGTGCCTTaGGATGCCCTTGTCACTAGTATGGCTCTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: WHTQLCSSGQVP*DALVTSMALSC
Trigger: GCAGGACAGAGCCATACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGCAGAGTTGTGTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGATGGCATCACCCATaGGGAGGCAGCATCTTACCC +
Preference number: 3 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVRWHHP*GGSILP
Trigger: GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 72 bp GTGAAGCTGGGGCCAAATGTCTACAGGGATGCTTCGTaGGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: VKLGPNVYRDAS*GTPKARILAFC
Trigger: ACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTTGGCCCCAGCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp TTTAGAGTAGGTTGGGTTGCCGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGC +
Preference number: 3 (lower is better)
Translates to: FRVGWVAVVTRR*MAALGGREVPS
Trigger: GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAACCCAACCTACTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 72 bp GGGATGCTTCGTGAGGCACCCCCAAAGCAAGGATCTTaGCCTTCTGTTCCTCCACATGAGCTCCAGGTAAGT +
Preference number: 3 (lower is better)
Translates to: GMLREAPPKQGS*PSVPPHELQVS
Trigger: ACTTACCTGGAGCTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAGCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp AACATTCAGTACTTGGGCAAACTCTGGGTGCCATGGTaGCCACTGCTGTCTCCGGGAGTGCCATGTCCACAA +
Preference number: 3 (lower is better)
Translates to: NIQYLGKLWVPW*PLLSPGVPCPQ
Trigger: TTGTGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp CAAAACATTCAGTACTTGGGCAAACTCTGGGTGCCATaGTGGCCACTGCTGTCTCCGGGAGTGCCATGTCCA +
Preference number: 3 (lower is better)
Translates to: QNIQYLGKLWVP*WPLLSPGVPCP
Trigger: TGGACATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTTGGGCGTTTGGACCGTaGAAACAAAATGAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GGHGETSQMASPIGRQHLWAFGP*KQNECP
Trigger: GGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCA...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 72 bp GCTGATAGAAACTCAGGGGATAGAAGGCCTTCCCTTTaGGCCGCAGGTATGGCACACACAACTCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: ADRNSGDRRPSL*AAGMAHTTLQL
Trigger: GAGCTGCAGAGTTGTGTGTGCCATACCTGCGGCTCAAAGGGAAGGCCTTCTATCCCCTGAGTTTCTATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp AGGTATGGCACACACAACTCTGCAGCTCTGGGCAAGTaGCTTGGGATGCCCTTGTCACTAGTATGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: RYGTHNSAALGK*LGMPLSLVWLC
Trigger: ACAGAGCCATACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGCAGAGTTGTGTGTGCCATACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTGACCACCCTAATTCCTaGATCCTGTGCTTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCDHPNS*ILCFKL
Trigger: CAACTTGAAGCACAGGATCAAGGAATTAGGGTGGTC...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 72 bp AGACACCAGCACAGGGTGGGTGAGAAGACATCCTGCTaGCTTTATAAAGTGATGTGGGGCAGGGTTGTCGAG +
Preference number: 3 (lower is better)
Translates to: RHQHRVGEKTSC*LYKVMWGRVVE
Trigger: CTCGACAACCCTGCCCCACATCACTTTATAAAGTCAGCAGGATGTCTTCTCACCCACCCTGTGCTGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACTGGGCGTTTGGACCGTaGAAACAAAATGAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDWAFGP*KQNECP
Trigger: GGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCA...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CAA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACATGGGCGTTTGGACCGTaGAAACAAAATGAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: SSFVANRKEGSLAGQRETWAFGP*KQNECP
Trigger: GGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCA...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAAAGTGGGCAGATCACTaGAGGTCAGGAGTTCGAGAT +
Preference number: 3 (lower is better)
Translates to: SSFVANRKEGSLAGQRETKWADH*RSGVRD
Trigger: ATCTCGAACTCCTGACCTCAAGTGATCTGCCCACTT...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp ATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATGGCAGGGAGACATGGTAACTGCTaGCTGAACTCGCATGAACCC +
Preference number: 3 (lower is better)
Translates to: MYRFFWPVKKQVQVWMAGRHGNC*LNSHEP
Trigger: GGGTTCATGCGAGTTCAGCAAGCAGTTACCATGTCT...CCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR TCA 72 bp GCAAGTCAGGGTTTTACTTGCCTGGGGGCAGGGATTTaGAACCAGCTGTCTTCTCCTGGCATGGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: ASQGFTCLGAGI*NQLSSPGMAFF
Trigger: AAAGAATGCCATGCCAGGAGAAGACAGCTGGTTTCAAATCCCTGCCCCCAGGCAAGTAAAACCCTGACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 72 bp TCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTaGATGACACCTGGATTCTATGGCCTTTCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: STGRPHFSKDWL*MTPGFYGLSLH
Trigger: GTGGAGGGAAAGGCCATAGAATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp TGGAGGCTACTGGGAAAGCTCAGGGATCCTGGGCCATaGTCTTCCACTCTGATAACCAATTCATTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: WRLLGKLRDPGP*SSTLITNSFSS
Trigger: TGAGGAGAATGAATTGGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCTGAGCTTTCCCAGTAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp CTGGGCAAGTGCCTTGGGATGCCCTTGTCACTAGTATaGCTCTGTCCTGCTAATGCCAGTCTGTCAATACTT +
Preference number: 3 (lower is better)
Translates to: LGKCLGMPLSLV*LCPANASLSIL
Trigger: AAGTATTGACAGACTGGCATTAGCAGGACAGAGCCATACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp CGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTaGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: RFFWPVKKQVQV*MAGNKVDEEAE
Trigger: TTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR TCA 72 bp AGTTTGCCGACCTTGCTTGAGAACATGAAGAAGGCATaGGGCTGTAGTATGTCAAGTGAGGGCGTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: SLPTLLENMKKA*GCSMSSEGVRS
Trigger: TGACCTCACGCCCTCACTTGACATACTACAGCCTCATGCCTTCTTCATGTTCTCAAGCAAGGTCGGCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
3UTR GCA 72 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATaGTTCCAAGCAGTGAAGCTGGGGCCAAATGTCTAC +
Preference number: 3 (lower is better)
Translates to: DFKSEPTQEGGT*FQAVKLGPNVY
Trigger: GTAGACATTTGGCCCCAGCTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp GCATGCTGTGGGGCTGTGCAAGATTCGCTGCTCTGCTaGTGTTGTCATTTTGATGCTACAATTACAGAGAGG +
Preference number: 3 (lower is better)
Translates to: ACCGAVQDSLLC*CCHFDATITER
Trigger: CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp TCATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGAACAAAGTTGACGAGG +
Preference number: 3 (lower is better)
Translates to: SCTASSGLSKSK*RFGWQGTKLTR
Trigger: CCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR CCA 72 bp AGGAAACTGGAGGCTACTGGGAAAGCTCAGGGATCCTaGGCCATGGTCTTCCACTCTGATAACCAATTCATT +
Preference number: 3 (lower is better)
Translates to: RKLEATGKAQGS*AMVFHSDNQFI
Trigger: AATGAATTGGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCTGAGCTTTCCCAGTAGCCTCCAGTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp ATCTTCTGTCTTGAGCAAGTCAGGGTTTTACTTGCCTaGGGGCAGGGATTTGAAACCAGCTGTCTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: IFCLEQVRVLLA*GQGFETSCLLL
Trigger: CAGGAGAAGACAGCTGGTTTCAAATCCCTGCCCCCAGGCAAGTAAAACCCTGACTTGCTCAAGACAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp TTACAGAGAGGCGGTTCAGCACCCAGCCGATCGGTGTaGCTGCCAAACACATTTGAGCATGACAAGATAAAT +
Preference number: 3 (lower is better)
Translates to: LQRGGSAPSRSV*LPNTFEHDKIN
Trigger: ATTTATCTTGTCATGCTCAAATGTGTTTGGCAGCCACACCGATCGGCTGGGTGCTGAACCGCCTCTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp ATTATTACTTGTTGGAGTCTTGTCTCAGGCATGCTGTaGGGCTGTGCAAGATTCGCTGCTCTGCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: IITCWSLVSGML*GCARFAALLLL
Trigger: CAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACAAGACTCCAACAAGTAATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp AACTCTGCCATGACTCCTAGAGACCACAGGAAGGCTTaGGTAAGGTCTCTCACTCACTCAACCAAACTTTCC +
Preference number: 3 (lower is better)
Translates to: NSAMTPRDHRKA*VRSLTHSTKLS
Trigger: GGAAAGTTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
3UTR CCA 72 bp TCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATaGCAGGGAACAAAGTTGACGAGGAGGCTGAACAAC +
Preference number: 3 (lower is better)
Translates to: SSGLSKSKCRFG*QGTKLTRRLNN
Trigger: GTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR TCA 72 bp GACTTCCTCTTTCTGAAGGTTGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCCTATTCAGGGTACTCA +
Preference number: 3 (lower is better)
Translates to: DFLFLKVGRLDR*NKMSAPYSGYS
Trigger: TGAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 72 bp TGTGCAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTaGTGCTACAATTACAGAGAGGCGGTTCAGCACCCA +
Preference number: 3 (lower is better)
Translates to: CARFAALLLLSF*CYNYREAVQHP
Trigger: TGGGTGCTGAACCGCCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp TGTCTCAGGCATGCTGTGGGGCTGTGCAAGATTCGCTaGTCTGCTGCTGTTGTCATTTTGATGCTACAATTA +
Preference number: 3 (lower is better)
Translates to: CLRHAVGLCKIR*SAAVVILMLQL
Trigger: TAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATGCCTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp ACAACGGAATACTACCTTCCCAACAGTATCCTGGCATaGCGTAGACATGGTAACTGCTTGCTGAACTCGCAT +
Preference number: 3 (lower is better)
Translates to: TTEYYLPNSILA*RRHGNCLLNSH
Trigger: ATGCGAGTTCAGCAAGCAGTTACCATGTCTACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
3UTR CCA 72 bp GTCAGTCACGCTGCATTTCTCAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAGCAGTTGTCATGGATA +
Preference number: 3 (lower is better)
Translates to: VSHAAFLSGKEK*PRHWNQQLSWI
Trigger: TATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCGTGACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 72 bp TGGTTTCTGCAGCGCTGGCTACCTACTTGGGGAACATaGTTGCTCACAAAACATTCAGTACTTGGGCAAACT +
Preference number: 3 (lower is better)
Translates to: WFLQRWLPTWGT*LLTKHSVLGQT
Trigger: AGTTTGCCCAAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp GAGGCTGTTTGGTTTCTGCAGCGCTGGCTACCTACTTaGGGAACATGGTTGCTCACAAAACATTCAGTACTT +
Preference number: 3 (lower is better)
Translates to: EAVWFLQRWLPT*GTWLLTKHSVL
Trigger: AAGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCAAACAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAACAGAAACATTCATGTaGACAGGTAGCAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: SSFVANRKEGSLAGQRETTETFM*TGSNRV
Trigger: GACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCACAGAAACATTCATGTaGACAGGTAGCAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLTETFM*TGSNRV
Trigger: GACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CAA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTCCATCGGTTTGTAGTTaGTCTAGAGTCACCCTTGCA +
Preference number: 3 (lower is better)
Translates to: FHWKTTFQQGLALNDTWIPSVCS*SRVTLA
Trigger: TGCAAGGGTGACTCTAGACAAACTACAAACCGATGG...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGACAGAAACATTCATGTaGACAGGTAGCAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKTETFM*TGSNRV
Trigger: GACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCATGGGCGTTTGGACCGTaGAAACAAAATGAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSWAFGP*KQNECP
Trigger: GGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCA...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACGATGGATGGCAGCCCTaGGTGGCAGAGAGGTTCCTA +
Preference number: 3 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDDGWQP*VAERFL
Trigger: TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATC...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACACTAAGTAGGCATTCTTaGAAAAACTCATTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SSFVANRKEGSLAGQRETLSRHS*KNSLPG
Trigger: TCCAGGCAATGAGTTTTTCAAAGAATGCCTACTTAG...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 72 bp GTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCAGGCATACAAGGCTTT +
Preference number: 3 (lower is better)
Translates to: VIEDRACCERKF*VMFSFAGIQGF
Trigger: AAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
3UTR CCA 72 bp ACCCCTAAAAGATTCAGGCTATGGCTAAGTGATCCCTaGGTCTTACAAAGGAAACTGGAGGCTACTGGGAAA +
Preference number: 3 (lower is better)
Translates to: TPKRFRLWLSDP*VLQRKLEATGK
Trigger: TTTCCCAGTAGCCTCCAGTTTCCTTTGTAAGACCCAGGGATCACTTAGCCATAGCCTGAATCTTTTAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCACAGAAACATTCATGTaGACAGGTAGCAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFTETFM*TGSNRV
Trigger: GACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CAA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACATGAGAAAACGGCTTaGCAAGTCTTCCTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTHEKTA*QVFLLV
Trigger: AACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR-3UTR CAA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCATTGGGATCACGGGAATaGGAGGTGAAAGGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSLGSRE*EVKGKS
Trigger: ACTCTTCCCTTTCACCTCCAATTCCCGTGATCCCAA...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp CTGGCTCCAATTCTAGGACACCAAGGCAGGCCACAATaGACAGGGTCCATCCCTATATATGTTTATTTTGAA +
Preference number: 3 (lower is better)
Translates to: LAPILGHQGRPQ*TGSIPIYVYFE
Trigger: TTCAAAATAAACATATATAGGGATGGACCCTGTGCATTGTGGCCTGCCTTGGTGTCCTAGAATTGGAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp ATACCCACACAAGGGTCTAGGTCTATGCTAAGCCTTTaGTCTCTAAAGCATTCCACCTTGAGAGACGTTTTC +
Preference number: 3 (lower is better)
Translates to: IPTQGSRSMLSL*SLKHSTLRDVF
Trigger: GAAAACGTCTCTCAAGGTGGAATGCTTTAGAGAGCAAAGGCTTAGCATAGACCTAGACCCTTGTGTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp CCACCCTCCAACCTTGGGTTTCTTCCTGAATCACAATaGCCTATATTAGTCTCAAGCCTTGAAAGACTGAGA +
Preference number: 3 (lower is better)
Translates to: PPSNLGFLPESQ*PILVSSLERLR
Trigger: TCTCAGTCTTTCAAGGCTTGAGACTAATATAGGCCATTGTGATTCAGGAAGAAACCCAAGGTTGGAGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CCA 72 bp GAGGCTGACCTTAATACCCCTAAAAGATTCAGGCTATaGCTAAGTGATCCCTGGGTCTTACAAAGGAAACTG +
Preference number: 3 (lower is better)
Translates to: EADLNTPKRFRL*LSDPWVLQRKL
Trigger: CAGTTTCCTTTGTAAGACCCAGGGATCACTTAGCCATAGCCTGAATCTTTTAGGGGTATTAAGGTCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR GCA 72 bp GTCTTCCACTCTGATAACCAATTCATTCTCCTCATCTaGCCTAAAGTTTCCTGTTCACACAGAGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: VFHSDNQFILLI*PKVSCSHRESQ
Trigger: CTGACTCTCTCTGTGTGAACAGGAAACTTTAGGGCAGATGAGGAGAATGAATTGGTTATCAGAGTGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTAAAGCTAATTATTACTaGTTGGAGTCTTGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: FHWKTTFQQGLALNDTWIKANYY*LESCLR
Trigger: CCTGAGACAAGACTCCAACAAGTAATAATTAGCTTT...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CCA 72 bp ATGTGCATTGTCAGATACAAGGTTGATTCTGGCATCTaGATAACCAAGAAAGCTGCTTTTAGGTGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: MCIVRYKVDSGI*ITKKAAFRCLD
Trigger: GTCCAGACACCTAAAAGCAGCTTTCTTGGTTATCCAGATGCCAGAATCAACCTTGTATCTGACAATGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 72 bp CATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATaGCATTCACATGTGGAAGATACGGATAACTCTGTT +
Preference number: 3 (lower is better)
Translates to: HRFVVCLESPLQ*HSHVEDTDNSV
Trigger: AACAGAGTTATCCGTATCTTCCACATGTGAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR TCA 72 bp CCGGAAAAGAGCTGTATAATCCTTGAGCTGATAAACTaGGTAGTGAATCACCATGACAAACCCCTGTTAACT +
Preference number: 3 (lower is better)
Translates to: PEKSCIILELIN*VVNHHDKPLLT
Trigger: AGTTAACAGGGGTTTGTCATGGTGATTCACTACTCAGTTTATCAGCTCAAGGATTATACAGCTCTTTTCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 72 bp CCTTCTGTTCCTCCACATGAGCTCCAGGTAAGTTTATaGTGGGACAGATTACAACTTCAAACATCAAATGTG +
Preference number: 3 (lower is better)
Translates to: PSVPPHELQVSL*WDRLQLQTSNV
Trigger: CACATTTGATGTTTGAAGTTGTAATCTGTCCCATCATAAACTTACCTGGAGCTCATGTGGAGGAACAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR-3UTR CAA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACACTTGGGGAACATGGTaGCTCACAAAACATTCAGTA +
Preference number: 3 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDTWGTW*LTKHSV
Trigger: TACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGT...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR TCA 72 bp GTCTTCAAGTTCCTTCCTACTCATTGGCTCATATTCTaGAGTTTATCCAGTTTTGTAGCTAATAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: VFKFLPTHWLIF*SLSSFVANRKE
Trigger: CTCCTTCCTATTAGCTACAAAACTGGATAAACTTCAGAATATGAGCCAATGAGTAGGAAGGAACTTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCATGGGATCTGCCCGCTaGCTGCGGCGCGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSMGSAR*LRRARH
Trigger: GTGCCGAGCGCGCCGCAGCCAGCGGGCAGATCCCAT...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR GCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGGCCGAGGTGCTaGTGTTCCGGGCGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLTRPRC*CSGRGQ
Trigger: TTGCCCGCGCCCGGAACAGCAGCACCTCGGCCGGGT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCCAACCAGCCAGGCTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LQPARLLRWVNVIEDRACAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...GCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGCTGGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCGGTGAGAGGTGGAGGTaGCCGGAGCTTCGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALEGLVSNSQSNGRPLKGGERWR*PELRCG
Trigger: GCCACACCGAAGCTCCGGGCACCTCCACCTCTCACC...GCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCGTCGCTGGACGTGGATaGGGTGGGCATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GDRWQVGFDGQVIVCRPCVAGRG*GGHRAG
Trigger: TCCAGCCCTATGCCCACCTCATCCACGTCCAGCGAC...GCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCGCAGAAGCCAGAGGATaGCAGGTGCCAACAGACAGG +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSAEARG*QVPTDR
Trigger: CCTGTCTGTTGGCACCTGTCATCCTCTGGCTTCTGC...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCACTCTGAAGCAACGCTaGCATCCAAGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSTLKQR*HPRGSW
Trigger: CCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGT...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CCAGTGTCAGCGAACTCTGCCATGACTCCTAGAGACCACAGGAAGGCTTGGGTAGGTGAGAGGTGGAGGTaGCCGGAGCTTCGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PVSANSAMTPRDHRKAWVGERWR*PELRCG
Trigger: GCCACACCGAAGCTCCGGGCACCTCCACCTCTCACC...TACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCGGGGCTGGCCAGTGGTaGGTTAGAGGCAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVGAGQW*VRGRQG
Trigger: CCCTTGCCTGCCTCTAACCCACCACTGGCCAGCCCC...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGTTGGGCACTCAAGGCTaGGCAACTCTGCCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRLGTQG*ATLPLR
Trigger: CCTTAGGGGCAGAGTTGCTCAGCCTTGAGTGCCCAA...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR GCA 90 bp GCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTCATCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ALQAYKAFAFRNGVLESSSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...TGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATGCCATGGTGGCCACTaGTGTCTCCGGGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLCHGGH*CLRECH
Trigger: ATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGTGGGCAAACTCTGGGTaGCATGGTGGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRWANSG*HGGHCC
Trigger: ACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCA...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGGGCATAGGGCTGGATaGCGCCGAGAACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPGHRAG*RREHGP
Trigger: TGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCGGGGGATGAGTCGCTaGACGTGGATGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPRGMSR*TWMRWA
Trigger: TGCCCACCTCATCCACGTCCAGCGACTCATCCCCCG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGGGGCTGGCCAGTGGTaGGTTAGAGGCAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLGAGQW*VRGRQG
Trigger: CCCTTGCCTGCCTCTAACCCACCACTGGCCAGCCCC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGAGCACCACCCGCGCTaGGTCACCTCCCGACCATCC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLEHHPR*VTSRPS
Trigger: GGATGGTCGGGAGGTGACCCAGCGCGGGTGGTGCTC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR TCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGCTGCTTCGTGCGACTTaGGCGTCTCTCGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: LREAPPKQGSWPSVPPHELLRAT*ASLGSA
Trigger: CGCACTTCCGAGAGACGCTCAAGTCGCACGAAGCAG...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLRWVNVIEDRACCERKFWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...GAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp GCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCAGATGGCGAGAGGGGTaGAGTTGGGCTTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: ALEGLVSNSQSNGRPLKGRWREG*SWAWIR
Trigger: CCGAATCCAAGCCCAACTTCACCCCTCTCGCCATCT...GCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TTAGGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTGTCGCTGGACGTGGATaGGGTGGGCATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGDRWQVGFDGQVIVCRPVAGRG*GGHRAG
Trigger: TCCAGCCCTATGCCCACCTCATCCACGTCCAGCGAC...AGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATCGCTTGCTCCTGGGTaGGTTCCCGGAAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLSLAPG*VPGKEL
Trigger: CAGCTCTTTTCCGGGAACTCACCCAGGAGCAAGCGA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCCAGCACAGGGTGGGTaGGAAGACATCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCPAQGG*EDILLT
Trigger: AGTCAGCAGGATGTCTTCTCACCCACCCTGTGCTGG...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTCCAGCTCTGCTTCGTaGGACTTGAGCGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCSSSAS*DLSVSR
Trigger: CCGAGAGACGCTCAAGTCGCACGAAGCAGAGCTGGA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAACTCTGAAGCAACGCTaGCATCCAAGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLTLKQR*HPRGSW
Trigger: CCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGT...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCAAGAGGGAGGGACATaGTTCCAAGCAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSQEGGT*FQAVKL
Trigger: CAGCTTCACTGCTTGGAAGCATGTCCCTCCCTCTTG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGCCGGCTCCACAGGTGTaGCGCTGGCTCACTCCGCGC +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKPAPQV*RWLTPR
Trigger: GCGCGGAGTGAGCCAGCGCCACACCTGTGGAGCCGG...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GCCAGGCTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGATGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ARLLRWVNVIEDRACCERCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...TCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTATGGCGCCGAGAACATaGGCCAAGATGGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLMAPRT*AKMARG
Trigger: CCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCAT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGTTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTAGGGAGCTGGAGCTGTaGACACGATGGGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLRELEL*TRWDLP
Trigger: GGGCAGATCCCATCGTGTCCACAGCTCCAGCTCCCT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGCGAGGCAGCAGTCGCTaGACTCGAGCGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWRGSSR*TRALGA
Trigger: GGCTCCCAGCGCTCGAGTTCAGCGACTGCTGCCTCG...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCTACTGTTTCTTCCTaGGGCCTCAGCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLATVSS*GLSRVG
Trigger: ACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCCGTAGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: EEAEQRNTTFPTVSWHAVAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...TACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp GTTTGGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VWMAGNKVDEEAEQRNTTWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...GGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCTCGCTTGCTCCTGGGTaGGTTCCCGGAAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPSLAPG*VPGKEL
Trigger: CAGCTCTTTTCCGGGAACTCACCCAGGAGCAAGCGA...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGCAGAAGCCAGAGGATaGCAGGTGCCAACAGACAGG +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPAEARG*QVPTDR
Trigger: CCTGTCTGTTGGCACCTGTCATCCTCTGGCTTCTGC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCCAGCAAGAGCAGATGTaGGAAGATGTGTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALEGLVSNSQSNGRPLKGQQEQM*EDVSGG
Trigger: GCCGCCTGACACATCTTCTCACATCTGCTCTTGCTG...GCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCACCCGGCCGAGGTGCTaGTGTTCCGGGCGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFTRPRC*CSGRGQ
Trigger: TTGCCCGCGCCCGGAACAGCAGCACCTCGGCCGGGT...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGCGTCTCTCGGAAGTaGGGACTATCGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVSVSRK*GLSRQQ
Trigger: CTGCTGCCTCGATAGTCCGCACTTCCGAGAGACGCT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VDEEAEQRNTTFPTVSWHSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...ATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCGAGGAGGCTGAACACTaGATGAAGAGAGGACCGAGC +
Preference number: 4 (lower is better)
Translates to: ALEGLVSNSQSNGRPLKGEEAEH*MKRGPS
Trigger: GCTCGGTCCTCTCTTCATGCAGTGTTCAGCCTCCTC...GCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR GCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGTGGGCAAACTCTGGGTaGCATGGTGGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQWANSG*HGGHCC
Trigger: ACAGCAGTGGCCACCATGGCACCCAGAGTTTGCCCA...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CCTAGAGACCACAGGAAGGCTTGGGTAAGGTCTCTCACTCACTCAACCAAACTTGGCGGCCAGTGGAAGTaGCCAGGTGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRDHRKAWVRSLTHSTKLGGQWK*PGERWR
Trigger: CCTCCACCTCTCACCTGGGCACTTCCACTGGCCGCC...AAGTTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCTGCCGATTTTTCTCTaGGAGCCGATGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSLPIFL*EPMNKA
Trigger: AGCCTTGTTCATCGGCTCCCAGAGAAAAATCGGCAG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCGGGCATAGGGCTGGATaGCGCCGAGAACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLGHRAG*RREHGP
Trigger: TGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCC...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACACGGGGGATGAGTCGCTaGACGTGGATGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTRGMSR*TWMRWA
Trigger: TGCCCACCTCATCCACGTCCAGCGACTCATCCCCCG...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGGCAGAGATGGGTGAATaGGAGGACATGGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRAEMGE*EDMGKP
Trigger: TGGTTTCCCCATGTCCTCCCATTCACCCATCTCTGC...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCGGGGCTGGCCAGTGGTaGGTTAGAGGCAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAGAGQW*VRGRQG
Trigger: CCCTTGCCTGCCTCTAACCCACCACTGGCCAGCCCC...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAAGGGGGCTGGCCAGTaGTGGGTTAGAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPKGAGQ*WVRGRQ
Trigger: TTGCCTGCCTCTAACCCACCACTGGCCAGCCCCCTT...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAAAGGGGGCTGGCCAGTaGTGGGTTAGAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESKGAGQ*WVRGRQ
Trigger: TTGCCTGCCTCTAACCCACCACTGGCCAGCCCCCTT...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACAGTGTCAGGCGGCCAGTaGAAGTGCCCAGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTVSGGQ*KCPGER
Trigger: CCTCTCACCTGGGCACTTCCACTGGCCGCCTGACAC...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCGAAACTGGTACATCATaGGTGGTCCTGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSETGTS*VVLEAF
Trigger: GAATGCTTCCAGGACCACTCATGATGTACCAGTTTC...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCTTCCTGTTTCTCTGTTaGCTGAACGGTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSFLFLC*LNGVEE
Trigger: CTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAA...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCGTCGCTGGACGTGGATaGGGTGGGCATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTVAGRG*GGHRAG
Trigger: TCCAGCCCTATGCCCACCTCATCCACGTCCAGCGAC...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCACCCTGCAACAGACCTaGCGGGGGATGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTTLQQT*RGMSRW
Trigger: CCAGCGACTCATCCCCCGTCAGGTCTGTTGCAGGGT...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR TCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGAGGACCGAGCCAATaGGAGAACAACGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVRGPSQ*ENNGSN
Trigger: GTTGCTGCCGTTGTTCTCTCATTGGCTCGGTCCTCT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR TCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGCCACCTGTAAAGCTATaGCGGCACAATCTATACCCC +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRPPVKL*RHNLYP
Trigger: GGGGTATAGATTGTGCCGTCATAGCTTTACAGGTGG...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTAGGAGGCTGAACAAGTaGGTTGGGCCGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QLCRHTRLLPSGTVCWSLRRLNK*VGPGGF
Trigger: AAACCCACCCGGCCCAACTCACTTGTTCAGCCTCCT...AAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAAGCGTCTCTCGGAAGTaGGGACTATCGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTSVSRK*GLSRQQ
Trigger: CTGCTGCCTCGATAGTCCGCACTTCCGAGAGACGCT...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCCCTGGCCTGTCTACTaGTTCCACATCAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSPWPVY*FHIKAK
Trigger: TTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGG...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGCAGCTCTGGGCAAGTaGCTTGGGATGCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLAALGK*LGMPLS
Trigger: TGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGCAGCAAGGCGGCCAGTGGAAGTaGCCAGGTGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PFFKDHSRCSVKRGLWQQGGQWK*PGERWR
Trigger: CCTCCACCTCTCACCTGGGCACTTCCACTGGCCGCC...TTGCTGCCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACACTGCTGGGACACCTaGGTGCCGCGCACGCCCACG +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVHCWDT*VPRTPT
Trigger: CGTGGGCGTGCGCGGCACGCAGGTGTCCCAGCAGTG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR GCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGATCTGCCCGCTGGCTaGGGCGCGCTCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHDLPAG*GALGTL
Trigger: CAGAGTGCCGAGCGCGCCGCAGCCAGCGGGCAGATC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR CCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGGCAGTCCCTTCACTCTaGCTGTCTTTGTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRAVPSL*LSLFEL
Trigger: CAACTCGAACAAAGACAGCCAGAGTGAAGGGACTGC...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACAATGGCGCCGAGAACATaGGCCAAGATGGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTMAPRT*AKMARG
Trigger: CCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCAT...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp CCTAGAGACCACAGGAAGGCTTGGGTAAGGTCTCTCACTCACTCAACCAAACTTGGGCATAGGGCTGGATaGCGCCGAGAACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRDHRKAWVRSLTHSTKLGHRAG*RREHGP
Trigger: TGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCC...AAGTTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR CCA 90 bp GGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTCCGGAACGGTGTGCTaGAGTCTTCATGTACCGCTT +
Preference number: 4 (lower is better)
Translates to: GDRWQVGFDGQVIVCRPCSGTVC*SLHVPL
Trigger: AAGCGGTACATGAAGACTCCAGCACACCGTTCCGGA...GCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGCTCAGCAGTTCTGCTaGGGCCCACGGTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESAQQFC*GPRLEE
Trigger: TTCCTCTAACCGTGGGCCCCAGCAGAACTGCTGAGC...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCAAGGGGGCTGGCCAGTaGTGGGTTAGAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLKGAGQ*WVRGRQ
Trigger: TTGCCTGCCTCTAACCCACCACTGGCCAGCCCCCTT...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTGGAATCCCAGCACTTTaGGGGTCTGAAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLGIPAL*GSEVGR
Trigger: TCTGCCCACTTCAGACCCCCAAAGTGCTGGGATTCC...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTATTGGCAGCAGCTCATaGGCACTGCACAGACACACG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLIGSSS*ALHRHT
Trigger: CGTGTGTCTGTGCAGTGCCCATGAGCTGCTGCCAAT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAGGAAGGAGGGGAGCCTaGCTGGGCAAAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETGRRGA*LGKGKQ
Trigger: CTGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCC...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATGGTTTCTGCAGCGCTaGCTACCTACTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLWFLQR*LPTWGT
Trigger: TGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTCCTAGAGACCACAGGAAGGCTTGGGTAAGGTCTCTCACTCACTCAACCAAAGTGTCAGGCGGCCAGTaGAAGTGCCCAGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TPRDHRKAWVRSLTHSTKVSGGQ*KCPGER
Trigger: CCTCTCACCTGGGCACTTCCACTGGCCGCCTGACAC...TTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCGCGCTCGGCACTCTaGCCCCACTGCTGGGACACC +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVARSAL*PHCWDT
Trigger: GGTGTCCCAGCAGTGGGGCCAGAGTGCCGAGCGCGC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTGGTTAAAAGCAGACCAGTGTCAGCGAACTCTGCCATGACTCCTAGAGACCACAGATGGCGAGAGGGGTaGAGTTGGGCTTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: LVKSRPVSANSAMTPRDHRWREG*SWAWIR
Trigger: CCGAATCCAAGCCCAACTTCACCCCTCTCGCCATCT...GTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGGTCTGCTTTTAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR TCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGTCGCTGGACGTGGATaGGGTGGGCATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSVAGRG*GGHRAG
Trigger: TCCAGCCCTATGCCCACCTCATCCACGTCCAGCGAC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR TCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGAGGCTGAACACTGCATaGAGAGAGGACCGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKRLNTA*REDRAN
Trigger: ATTGGCTCGGTCCTCTCTTCATGCAGTGTTCAGCCT...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR TCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCGTAATTCTCAGGGATaGGGCCAGTCTTTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCRNSQG*GQSFRS
Trigger: TGAACGGAAAGACTGGCCTCATCCCTGAGAATTACG...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCCTTCCGGAACGGTGTaGGTGAGTTGGGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQPSGTV*VSWAGW
Trigger: CCACCCGGCCCAACTCACTCACACCGTTCCGGAAGG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418236.5
ENST00000642734.1
CDS-3UTR TCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACAGCTTCGGTGTGGCAGTaGAGATGGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTASVWQ*RWLWKL
Trigger: CAGCTTCCACAGCCATCTTCACTGCCACACCGAAGC...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGATGGCTGTGGAAGCTaGAGGACACTCTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKDGCGS*RTLCVI
Trigger: GATAACGCAGAGTGTCCTTCAGCTTCCACAGCCATC...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR GCA 90 bp GCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTCAGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: ALQAYKAFAFRNGVLESSGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...TGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LREAPPKQGSWPSVPPHEGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAAAAGCTCAGCAGTTCTaGTGGGGCCCACGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTKAQQF*WGPRLE
Trigger: CTCTAACCGTGGGCCCCAGCAGAACTGCTGAGCTTT...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAAAGCTCAGCAGTTCTaGTGGGGCCCACGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLKAQQF*WGPRLE
Trigger: CTCTAACCGTGGGCCCCAGCAGAACTGCTGAGCTTT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTACCTCTTCATCCTGCATaGAAACAGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLPLHPA*KQIQLP
Trigger: AGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGG...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACACTCTGAAGCAACGCTaGCATCCAAGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDTLKQR*HPRGSW
Trigger: CCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGT...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGCCGATCGGTGTGGCTaGCAAACACATTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPADRCG*QTHLSM
Trigger: CATGCTCAAATGTGTTTGGCAGCCACACCGATCGGC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACCACAGGTGTGGCGCTaGCTCACTCCGCGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSPQVWR*LTPRAV
Trigger: CACCGCGCGCGGAGTGAGCCAGCGCCACACCTGTGG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCCCACAGGTGTGGCGCTaGCTCACTCCGCGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPPQVWR*LTPRAV
Trigger: CACCGCGCGCGGAGTGAGCCAGCGCCACACCTGTGG...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCCATGGTGATAACCCCTaGCCTGTCTACTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVHGDNP*PVYCFH
Trigger: GTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATG...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGCATGGTGATAACCCCTaGCCTGTCTACTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LREAPPKQGSWPSVPPHEHGDNP*PVYCFH
Trigger: GTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATG...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TCCTCAGGGAATTTGAAAGGTCACTGGCAAGGCTGGTTAAAAGCAGACCAGTGTCGGGGGATGAGTCGCTaGACGTGGATGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSGNLKGHWQGWLKADQCRGMSR*TWMRWA
Trigger: TGCCCACCTCATCCACGTCCAGCGACTCATCCCCCG...ACACTGGTCTGCTTTTAACCAGCCTTGCCAGTGACCTTTCAAATTCCCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCTTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAACTCTGGGTGCCATGGTaGCCACTGCTGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKLWVPW*PLLSPG
Trigger: TCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAG...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCCCCAGCCGATCGGTGTaGCTGCCAAACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPPSRSV*LPNTFE
Trigger: CTCAAATGTGTTTGGCAGCCACACCGATCGGCTGGG...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCGAGGCAGCAGTCGCTaGACTCGAGCGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLRGSSR*TRALGA
Trigger: GGCTCCCAGCGCTCGAGTTCAGCGACTGCTGCCTCG...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGCTGCTTCGTGCGACTTaGGCGTCTCTCGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVLLRAT*ASLGSA
Trigger: CGCACTTCCGAGAGACGCTCAAGTCGCACGAAGCAG...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTACATCTTCAAGATTCCTaGGGACAGTGGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLHLQDS*GQWQTP
Trigger: AGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATG...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGAAACTGGTACATCATaGGTGGTCCTGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLETGTS*VVLEAF
Trigger: GAATGCTTCCAGGACCACTCATGATGTACCAGTTTC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTTTGCCAAGTGGTTCATaGGCAGCTGTAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLLPSGS*AAVTSA
Trigger: GGCAGATGTTACAGCTGCTCATGAACCACTTGGCAA...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGTTGCCAAGTGGTTCATaGGCAGCTGTAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQLPSGS*AAVTSA
Trigger: GGCAGATGTTACAGCTGCTCATGAACCACTTGGCAA...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGAGATGGCGAGAGGGGTaGAGTTGGGCTTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKRWREG*SWAWIR
Trigger: CCGAATCCAAGCCCAACTTCACCCCTCTCGCCATCT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGTCGCTGGACGTGGATaGGGTGGGCATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQVAGRG*GGHRAG
Trigger: TCCAGCCCTATGCCCACCTCATCCACGTCCAGCGAC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR TCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGACCCTGCAACAGACCTaGCGGGGGATGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWTLQQT*RGMSRW
Trigger: CCAGCGACTCATCCCCCGTCAGGTCTGTTGCAGGGT...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAGGCTGAACACTGCATaGAGAGAGGACCGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLRLNTA*REDRAN
Trigger: ATTGGCTCGGTCCTCTCTTCATGCAGTGTTCAGCCT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCGTAATTCTCAGGGATaGGGCCAGTCTTTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPRNSQG*GQSFRS
Trigger: TGAACGGAAAGACTGGCCTCATCCCTGAGAATTACG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCAAATCCCCAGTGCAGTaGGTTGGGCCGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KLTRRLNNGILPSQQYPGKSPVQ*VGPGGF
Trigger: AAACCCACCCGGCCCAACTCACTGCACTGGGGATTT...GCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp GGCTTGGGTAAGGTCTCTCACTCACTCAACCAAACTTTCCTCCTGCTCTCAACAGCTTCGGTGTGGCAGTaGAGATGGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GLGKVSHSLNQTFLLLSTASVWQ*RWLWKL
Trigger: CAGCTTCCACAGCCATCTTCACTGCCACACCGAAGC...TGTTGAGAGCAGGAGGAAAGTTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR TCA 90 bp GCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGGGCTTTGCCGACCTTGCTTaGGAACATGAAGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: ALEGLVSNSQSNGRPLKGFADLA*EHEEGM
Trigger: CATGCCTTCTTCATGTTCTCAAGCAAGGTCGGCAAA...GCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp CTGGTTAAAAGCAGACCAGTGTCAGCGAACTCTGCCATGACTCCTAGAGACCACCAGCGAACTCTGCCATaGCTCCTAGAGACCACAGGA +
Preference number: 4 (lower is better)
Translates to: LVKSRPVSANSAMTPRDHQRTLP*LLETTG
Trigger: TCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTG...GTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGGTCTGCTTTTAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACACTCAGCAACTTCTaGACTCTGGAGTTGACACCC +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVTLSNF*TLELTP
Trigger: GGGTGTCAACTCCAGAGTGCAGAAGTTGCTGAGTGT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCACCACACCAAGGTTTaGCACCGTCATCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCHHTKV*HRHQIL
Trigger: CAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTG...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGATGTCCATGATGGCTaGTACTGTTTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLDVHDG*YCFFLR
Trigger: CCTCAGGAAGAAACAGTAGCAGCCATCATGGACATC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATGGCAGGGGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: MYRFFWPVKKQVQVWMAGGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...CCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGAAACCAAACAAACCCTaGAACAGACCTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQKPNKP*NRPDGG
Trigger: TCCCCCGTCAGGTCTGTTGCAGGGTTTGTTTGGTTT...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR GCA 90 bp GGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDRWQVGFDGQVIVCRPCLSKSK*RFGWQG
Trigger: TCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAG...GCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR GCA 90 bp AGGCTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RLLRWVNVIEDRACCERKGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...CTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCTTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACGCAGCTCATGGGCACTaGACAGACACACGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDAAHGH*TDTRKL
Trigger: TAGCTTCCGTGTGTCTGTGCAGTGCCCATGAGCTGC...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACATTCATGCCATTCTCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTFMPFS*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAATGGCATGAA...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCATGCTGTCTCCGGGAGTaGCATGTCCACAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESCCLRE*HVHKTQ
Trigger: CTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCA...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGATGCCATGGTGGCCACTaGTGTCTCCGGGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRCHGGH*CLRECH
Trigger: ATGGCACTCCCGGAGACAGCAGTGGCCACCATGGCA...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCCATGCTGTGGGGCTGTaGAAGATTCGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLHAVGL*KIRCSA
Trigger: AGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATG...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLGIQGF*LPERCE
Trigger: CTCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418236.5
ENST00000642734.1
CDS-3UTR GCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATGCTGGGACACCTGCGTaGCGCGCACGCCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYAGTPA*RARPRP
Trigger: TGGGCGTGGGCGTGCGCGGCACGCAGGTGTCCCAGC...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCCTGCCGATTTTTCTCTaGGAGCCGATGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVLPIFL*EPMNKA
Trigger: AGCCTTGTTCATCGGCTCCCAGAGAAAAATCGGCAG...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGGCTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLLRWVNVIEDRACCERKHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...CTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGATGGCGCCGAGAACATaGGCCAAGATGGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWMAPRT*AKMARG
Trigger: CCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCAT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGGGAAACCAGTCAGATaGCATCACCCATTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLGKPVR*HHPLGG
Trigger: GCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGGGGCTGGCCAGTGGTaGGTTAGAGGCAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHGAGQW*VRGRQG
Trigger: CCCTTGCCTGCCTCTAACCCACCACTGGCCAGCCCC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAAGGGGGCTGGCCAGTaGTGGGTTAGAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSKGAGQ*WVRGRQ
Trigger: TTGCCTGCCTCTAACCCACCACTGGCCAGCCCCCTT...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGGAATCCCAGCACTTTaGGGGTCTGAAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLGIPAL*GSEVGR
Trigger: TCTGCCCACTTCAGACCCCCAAAGTGCTGGGATTCC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGTCTGGGCAAGTGCCTTaGGATGCCCTTGTCACTAGT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLSGQVP*DALVTS
Trigger: ACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGA...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTATCCAGACTTGCTTTTaGGAGCAGAAGCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCIQTCF*EQKPED
Trigger: ATCCTCTGGCTTCTGCTCCCAAAAGCAAGTCTGGAT...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGTGGTTTCTGCAGCGCTaGCTACCTACTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLWFLQR*LPTWGT
Trigger: TGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCA...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAGACACCAGCACAGGGTaGGTGAGAAGACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETDTSTG*VRRHPA
Trigger: AGCAGGATGTCTTCTCACCCACCCTGTGCTGGTGTC...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCTCTGAATGACACCTaGATTCTATGGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLALNDT*ILWPFP
Trigger: AGGGAAAGGCCATAGAATCCAGGTGTCATTCAGAGC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGAGCGCGCTTATGAGTaGCTTCCCGTCCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKERAYE*LPVLDE
Trigger: CTCATCAAGGACGGGAAGTCACTCATAAGCGCGCTC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTTGGTTAACTGTGTCTTaGAGTCCCCGAAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLWLTVS*SPRNPW
Trigger: CCAAGGATTTCGGGGACTTCAAGACACAGTTAACCA...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGGAAACTGGTACATCATaGGTGGTCCTGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQETGTS*VVLEAF
Trigger: GAATGCTTCCAGGACCACTCATGATGTACCAGTTTC...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTCATGTACCGTGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RHTRLLPSGTVCWSLHVPCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...CGGTACATGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp TTAGGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGDRWQVGFDGQVIVCRPRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...AGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGCGTAATTCTCAGGGATaGGGCCAGTCTTTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLRNSQG*GQSFRS
Trigger: TGAACGGAAAGACTGGCCTCATCCCTGAGAATTACG...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGAGTCACCCTTGCAATaGCATTCACATGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLESPLQ*HSHVED
Trigger: ATCTTCCACATGTGAATGTCATTGCAAGGGTGACTC...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGCTTGAGCTGATAAACTaGGTAGTGAATCACCATGAC +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRLELIN*VVNHHD
Trigger: GTCATGGTGATTCACTACTCAGTTTATCAGCTCAAG...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCCTGGGGGCAGGGATTTaGAACCAGCTGTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTLGAGI*NQLSSP
Trigger: AGGAGAAGACAGCTGGTTTCAAATCCCTGCCCCCAG...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCTCTCCCCCTCAACTGTaGATGCTTTTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLSPPQL*MLLEPL
Trigger: CAGAGGCTCCAAAAGCATTCACAGTTGAGGGGGAGA...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCAGGACTGGCTCTGAATaGCACCTGGATTCTATGGCC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLRTGSE*HLDSMA
Trigger: GGCCATAGAATCCAGGTGTCATTCAGAGCCAGTCCT...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTAGCAAGGACTGGCTCTaGATGACACCTGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLSKDWL*MTPGFY
Trigger: ATAGAATCCAGGTGTCATTCAGAGCCAGTCCTTGCT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCTTGCTGAACTCGCATaGACCCTTGTGCCCATCACG +
Preference number: 4 (lower is better)
Translates to: LTRRLNNGILPSQQYPGMLAELA*TLVPIT
Trigger: CGTGATGGGCACAAGGGTTCATGCGAGTTCAGCAAG...CATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGTGTCAAGTGAGGGCGTaGGGTCAGAGGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWCQVRA*GQRGRN
Trigger: GTTCCTGCCCCTCTGACCTCACGCCCTCACTTGACA...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGGTCTTGTCCAGCTCTaGTTCGTGCGACTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKGLVQL*FVRLER
Trigger: ACGCTCAAGTCGCACGAAGCAGAGCTGGACAAGACC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCATTCGATACAGCCCTTaGTCGTTGATCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPIRYSP*SLIPLV
Trigger: AACCAGAGGGATCAACGAGCAAGGGCTGTATCGAAT...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAACACTCAGCAACTTCTaGACTCTGGAGTTGACACCC +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTTLSNF*TLELTP
Trigger: GGGTGTCAACTCCAGAGTGCAGAAGTTGCTGAGTGT...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CTTCGTGAGGCACCCCCAAAGCAAGGATCTTGGCCTTCTGTTCCTCCACATGAGAGCAGCTGTAACATCTaGCGATTTTTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LREAPPKQGSWPSVPPHESSCNI*RFFSGS
Trigger: GCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCT...CTCATGTGGAGGAACAGAAGGCCAAGATCCTTGCTTTGGGGGTGCCTCACGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGAGGAGGCTGAACACTaGATGAAGAGAGGACCGAGC +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKEEAEH*MKRGPS
Trigger: GCTCGGTCCTCTCTTCATGCAGTGTTCAGCCTCCTC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR GCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCAAAGCTCAGCAGTTCTaGTGGGGCCCACGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAKAQQF*WGPRLE
Trigger: CTCTAACCGTGGGCCCCAGCAGAACTGCTGAGCTTT...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCCCTCTTCATCCTGCATaGAAACAGATCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPPLHPA*KQIQLP
Trigger: AGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGG...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGTGATCTTGGCTCACTaGAATCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLVILAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGATTGCAGTGAGCCAAGATCAC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTCACCCAGGCTGGAGTaGAGGGGCGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQSPRLE*RGVILA
Trigger: AGCCAAGATCACGCCCCTGCACTCCAGCCTGGGTGA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCCTCAACTGTGAATaGTTTTGGAGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESPLNCE*FWSLCS
Trigger: ACTGCAGAGGCTCCAAAAGCATTCACAGTTGAGGGG...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCCACGAAGCAGGACTCTaGACCTCAGTACAACCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTRRLNNGILPSQQYPGHEAGL*TSVQPS
Trigger: GGAGGGTTGTACTGAGGTGCAGAGTCCTGCTTCGTG...GCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTCCGGCTCCACAGGTGTaGCGCTGGCTCACTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFPAPQV*RWLTPR
Trigger: GCGCGGAGTGAGCCAGCGCCACACCTGTGGAGCCGG...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTGCAACATTTGCCAAGTaGTTCATGAGCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCATFAK*FMSSCN
Trigger: GTTACAGCTGCTCATGAACCACTTGGCAAATGTTGC...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACACGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: AGNKVDEEAEQRNTTFPTRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...TGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp TTTGGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FGWQGTKLTRRLNNGILPCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...AGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCGCTCAGCAGTTCTGCTaGGGCCCACGGTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVAQQFC*GPRLEE
Trigger: TTCCTCTAACCGTGGGCCCCAGCAGAACTGCTGAGC...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAAGCTCAGCAGTTCTGCTaGGGCCCACGGTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKAQQFC*GPRLEE
Trigger: TTCCTCTAACCGTGGGCCCCAGCAGAACTGCTGAGC...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTGGAAGGAGGGGAGCCTaGCTGGGCAAAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSGRRGA*LGKGKQ
Trigger: CTGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCC...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACAAGGGATCCTGGGCCATaGTCTTCCACTCTGATAACC +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETRDPGP*SSTLIT
Trigger: GGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCT...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGAAACTCTGGGTGCCATaGTGGCCACTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWKLWVP*WPLLSP
Trigger: CGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCTACTTGGGCAAACTCTaGGTGCCATGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAYLGKL*VPWWPL
Trigger: CAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTA...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCCCAGCCGATCGGTGTaGCTGCCAAACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTPSRSV*LPNTFE
Trigger: CTCAAATGTGTTTGGCAGCCACACCGATCGGCTGGG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTTACAGGTGCTTCCACTaGAAGACCACATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCYRCFH*KTTFQQ
Trigger: TTGCTGAAATGTGGTCTTCCAGTGGAAGCACCTGTA...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGGACTTCCTGCACCTTaGAGACATATTCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLGLPAP*RHIPGI
Trigger: TATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCTTCTCTGGGAGCCGATaGACAAGGCTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLFSGSR*TRLWIS
Trigger: TGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAA...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTTGCCAAGTGGTTCATaGGCAGCTGTAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLLPSGS*AAVTSA
Trigger: GGCAGATGTTACAGCTGCTCATGAACCACTTGGCAA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGGCAGCTGGGCATTGGTaGGAGGCATATCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLAAGHW*EAYRAR
Trigger: CCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGC...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCCGTATGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: EEAEQRNTTFPTVSWHAVCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...TACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCTGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTTTCCTGTTTCTCTGTTaGCTGAACGGTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QLCRHTRLLPSGTVCWSLFLFLC*LNGVEE
Trigger: CTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAA...AAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGAGATGGCGAGAGGGGTaGAGTTGGGCTTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQRWREG*SWAWIR
Trigger: CCGAATCCAAGCCCAACTTCACCCCTCTCGCCATCT...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLRWVNVIEDRACCERKFRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...GAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACAAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCTTTTCTTGCAGTACTaGTGCATGTTGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPLFLQY*CMLAEM
Trigger: CATCTCAGCCAACATGCATCAGTACTGCAAGAAAAG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGGGCGTTTGGACCGTTaGAACAAAATGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRGRLDR*NKMSAP
Trigger: GGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAAACAGGAAACACTCTaGAGCAACGCTGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPKQETL*SNAAIQ
Trigger: TTGGATGGCAGCGTTGCTTCAGAGTGTTTCCTGTTT...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCAAGACTGAACACCACTaGTGTGTCGTGCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAKTEHH*CVVPTN
Trigger: GTTGGTGGGCACGACACATCAGTGGTGTTCAGTCTT...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACCCACCTGTAAAGCTATaGCGGCACAATCTATACCCC +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDPPVKL*RHNLYP
Trigger: GGGGTATAGATTGTGCCGTCATAGCTTTACAGGTGG...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGTACAGGGATGCTTCGTaGGGCACCCCCAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKYRDAS*GTPKAR
Trigger: CCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTA...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGCTGGGGGCAGGGATTTaGAACCAGCTGTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWLGAGI*NQLSSP
Trigger: AGGAGAAGACAGCTGGTTTCAAATCCCTGCCCCCAG...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAGCAGGAAAGATCTTCTGTCTTaGGCAAGTCAGGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: AMDPAWISAPISSPSPSRKDLLS*ASQGFT
Trigger: AGTAAAACCCTGACTTGCTCAAGACAGAAGATCTTT...CCTGCTGGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCCAGCACAGGGTGGGTaGGAAGACATCCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKPAQGG*EDILLT
Trigger: AGTCAGCAGGATGTCTTCTCACCCACCCTGTGCTGG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAAGCAAGGACTGGCTCTaGATGACACCTGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTSKDWL*MTPGFY
Trigger: ATAGAATCCAGGTGTCATTCAGAGCCAGTCCTTGCT...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCAACATGAAGAAGGCATaGGGCTGTAGTATGTCAAGT +
Preference number: 4 (lower is better)
Translates to: GDRWQVGFDGQVIVCRPCNMKKA*GCSMSS
Trigger: ACTTGACATACTACAGCCTCATGCCTTCTTCATGTT...GCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TTAGGTGACAGGTGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTTTGCCGACCTTGCTTaGGAACATGAAGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LGDRWQVGFDGQVIVCRPFADLA*EHEEGM
Trigger: CATGCCTTCTTCATGTTCTCAAGCAAGGTCGGCAAA...AGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCGATGTCCATGATGGCTaGTACTGTTTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPDVHDG*YCFFLR
Trigger: CCTCAGGAAGAAACAGTAGCAGCCATCATGGACATC...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTCATGTACCGCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RHTRLLPSGTVCWSLHVPLSKSK*RFGWQG
Trigger: TCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAG...CGGTACATGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAAAGCTCAGCAGTTCTaGTGGGGCCCACGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVKAQQF*WGPRLE
Trigger: CTCTAACCGTGGGCCCCAGCAGAACTGCTGAGCTTT...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGCAGCTCATGGGCACTaGACAGACACACGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRAAHGH*TDTRKL
Trigger: TAGCTTCCGTGTGTCTGTGCAGTGCCCATGAGCTGC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGTGATCTTGGCTCACTaGAATCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKVILAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGATTGCAGTGAGCCAAGATCAC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCTGCTTTTGGAGCCTCTaGAGTCAAGACAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVCFWSL*SQDRAF
Trigger: AAAAGCTCTGTCTTGACTGCAGAGGCTCCAAAAGCA...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCCCCCTCAACTGTGAATaGTTTTGGAGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLPLNCE*FWSLCS
Trigger: ACTGCAGAGGCTCCAAAAGCATTCACAGTTGAGGGG...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCGTCTTGTCTCAGGCATaGTGTGGGGCTGTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTVLSQA*CGAVQD
Trigger: ATCTTGCACAGCCCCACAGCATGCCTGAGACAAGAC...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATTCGCATGAACCCTTGTaGCCATCACGAAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: VDEEAEQRNTTFPTVSWHSHEPL*PSRSRT
Trigger: AGTCCTGCTTCGTGATGGGCACAAGGGTTCATGCGA...ATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGAAAGATCACTCTCGCTaGTCTGTAAAGAGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKKDHSR*SVKRGL
Trigger: TAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTT...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTGCTGAACTCGAGCGCTaGGAGCCCCATGGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTAELER*EPHGAR
Trigger: GCGCGCACCATGGGGCTCCCAGCGCTCGAGTTCAGC...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACGCAGTCCCTTCACTCTaGCTGTCTTTGTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDAVPSL*LSLFEL
Trigger: CAACTCGAACAAAGACAGCCAGAGTGAAGGGACTGC...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTCTCAGAAGCAGTCTTaGGGTCCATCAGGACACTCA +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLSQKQS*GPSGHS
Trigger: TGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACCTGCCGATTTTTCTCTaGGAGCCGATGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDLPIFL*EPMNKA
Trigger: AGCCTTGTTCATCGGCTCCCAGAGAAAAATCGGCAG...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCCTGCCGATTTTTCTCTaGGAGCCGATGAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLLPIFL*EPMNKA
Trigger: AGCCTTGTTCATCGGCTCCCAGAGAAAAATCGGCAG...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCATCAAATTCTGCTTGTaGTTGTTAGCAACATTTGCC +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSIKFCL*LLATFA
Trigger: GGCAAATGTTGCTAACAACCACAAGCAGAATTTGAT...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTGAGTCATGTTCAGCTCGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: TLSKTVPAVNESSESCSARDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...AGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCCGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGCGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VDEEAEQRNTTFPTVSWHHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...ATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCAGGGCATAGGGCTGGATaGCGCCGAGAACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSGHRAG*RREHGP
Trigger: TGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCC...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACGGGGGATGAGTCGCTaGACGTGGATGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSRGMSR*TWMRWA
Trigger: TGCCCACCTCATCCACGTCCAGCGACTCATCCCCCG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGATGTACCGCTTCTTCTaGCCTGTCAAAAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKMYRFF*PVKKQV
Trigger: CACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACAT...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR CCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCAAATGGCCTCGACACTaGAATCAGCAGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPKWPRH*NQQLSW
Trigger: CCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGGGAAACCAGTCAGATaGCATCACCCATTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSGKPVR*HHPLGG
Trigger: GCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGGGGAAACCAGTCAGATaGCATCACCCATTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWGKPVR*HHPLGG
Trigger: GCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCC...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGGGGAAACCAGTCAGATaGCATCACCCATTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKGKPVR*HHPLGG
Trigger: GCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCC...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAAGAGGCAGGCAAGGGTaGGAGCAGAGATGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTRGRQG*EQRWVN
Trigger: ATTCACCCATCTCTGCTCCCACCCTTGCCTGCCTCT...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTAGCAATGACATTCACATGTaGAAGATACGGATAACTCTG +
Preference number: 4 (lower is better)
Translates to: AVVTRRWMAALGGREVPSNDIHM*KIRITL
Trigger: CAGAGTTATCCGTATCTTCCACATGTGAATGTCATT...GCTAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCTGTCTCGCTTGCTCCTaGGTGAGTTCCCGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTCLACS*VSSRKR
Trigger: TCTTTTCCGGGAACTCACCCAGGAGCAAGCGAGACA...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACAGTTCGAGATCAGCCTaGCAAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDSSRSA*QTWQNP
Trigger: GGGGTTTTGCCATGTTTGCCAGGCTGATCTCGAACT...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCCTTTATAAAGTGATGTaGGGCAGGGTTGTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVLYKVM*GRVVEV
Trigger: TACCTCGACAACCCTGCCCCACATCACTTTATAAAG...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGTCTCAGGCATGCTGTaGGGCTGTGCAAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVVSGML*GCARFA
Trigger: AGCGAATCTTGCACAGCCCCACAGCATGCCTGAGAC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGCTCTGAATGACACCTaGATTCTATGGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLALNDT*ILWPFP
Trigger: AGGGAAAGGCCATAGAATCCAGGTGTCATTCAGAGC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 72 bp CAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATaGTATCTCACTGATGACAGGCCAACGGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: QGVCVPVHEKTG*YLTDDRPTAAL
Trigger: TAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACGGACTTCCTGCACCTTaGAGACATATTCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDGLPAP*RHIPGI
Trigger: TATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCC...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCTTGCCAAGTGGTTCATaGGCAGCTGTAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTLPSGS*AAVTSA
Trigger: GGCAGATGTTACAGCTGCTCATGAACCACTTGGCAA...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGCTACTGTTTCTTCCTaGGGCCTCAGCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQATVSS*GLSRVG
Trigger: ACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTGCTACTGTTTCTTCCTaGGGCCTCAGCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSATVSS*GLSRVG
Trigger: ACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGC...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTGGGCCGGGTGGGTTTaGCCACAGCCAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFWAGWV*PQPGLG
Trigger: ACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCA...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGAGAGGACCGAGCCAATaGGAGAACAACGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWRGPSQ*ENNGSN
Trigger: GTTGCTGCCGTTGTTCTCTCATTGGCTCGGTCCTCT...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR TCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCTATTCAGGGTACTCATaGGAAAACGGCTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPYSGYS*ENGFAS
Trigger: ACTTGCAAAGCCGTTTTCTCATGAGTACCCTGAATA...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCCTTGGGTTTCTTCCTaGATCACAATGGCCTATATT +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPPWVSS*ITMAYI
Trigger: AATATAGGCCATTGTGATTCAGGAAGAAACCCAAGG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAAGACTGAACACCACTaGTGTGTCGTGCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVKTEHH*CVVPTN
Trigger: GTTGGTGGGCACGACACATCAGTGGTGTTCAGTCTT...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTGCCATCCAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTAAAGCAGCAGCACATTaGGAACTGAACATTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LPSKGLLGSLTVHRFVVCKAAAH*ELNILR
Trigger: TCTTAGAATGTTCAGTTCTCAATGTGCTGCTGCTTT...ACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTGGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTACTCCAGGTAAGTTTATaGTGGGACAGATTACAACTT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLLQVSL*WDRLQL
Trigger: AAGTTGTAATCTGTCCCATCATAAACTTACCTGGAG...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGACATGCTTCCAAGCAGTaGAGCTGGGGCCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRHASKQ*SWGQMS
Trigger: AGACATTTGGCCCCAGCTTCACTGCTTGGAAGCATG...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGTCTCCCCCTCAACTGTaGATGCTTTTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKSPPQL*MLLEPL
Trigger: CAGAGGCTCCAAAAGCATTCACAGTTGAGGGGGAGA...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTCCTAGAGACCACAGGAAGGCTTGGGTAAGGTCTCTCACTCACTCAACCAAAGATGGCTGTGGAAGCTaGAGGACACTCTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: TPRDHRKAWVRSLTHSTKDGCGS*RTLCIE
Trigger: TTCGATACAGAGTGTCCTTCAGCTTCCACAGCCATC...TTTGGTTGAGTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR TCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGCAGCAAGAGCAGATGTaGGAAGATGTGTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWQQEQM*EDVSGG
Trigger: GCCGCCTGACACATCTTCTCACATCTGCTCTTGCTG...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp TCAGCGAACTCTGCCATGACTCCTAGAGACCACAGGAAGGCTTGGGTAAGGTCTTACAGAATTGTTAGGTaGCAGGTGGCAGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SANSAMTPRDHRKAWVRSYRIVR*QVAGWI
Trigger: AATCCAACCTGCCACCTGTCACCTAACAATTCTGTA...AGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR GCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCTCTTCCGACAAAGCTTaGATGGTGATAACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPASSDKA*MVITPG
Trigger: GCCAGGGGTTATCACCATGCAAGCTTTGTCGGAAGA...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTACTGGTTCTCCAGTTTTaGTGCTTTGATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLLVLQF*CFDETS
Trigger: AGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAG...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACAGCAGCTGTAACATCTaGCGATTTTTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDSSCNI*RFFSGS
Trigger: GCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCT...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCAGCAGCTGTAACATCTaGCGATTTTTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLSSCNI*RFFSGS
Trigger: GCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCT...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACGATGTCCATGATGGCTaGTACTGTTTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDDVHDG*YCFFLR
Trigger: CCTCAGGAAGAAACAGTAGCAGCCATCATGGACATC...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTGAGTCATGTTCAGCTTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TLSKTVPAVNESSESCSAFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...AGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp TTTGGATGGCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FGWQGTKLTRRLNNGILPFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...AGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTTCAGGGGCCTCTCGCTaGAGGACGGGGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTSGASR*RTGAWS
Trigger: ACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATGGCAGGGAACCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YRFFWPVKKQVQVWMAGNLSKSK*RFGWQG
Trigger: TCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAG...GTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGAGGTTACTAGGGTGTaGTCCAAATATATTCCGATG +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPEVTRV*SKYIPM
Trigger: CATCGGAATATATTTGGAGCACACCCTAGTAACCTC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCCGTGGTTACTAGGCGATGGATGGCAGCCCTTGGTGGCAGAGAGGTTCCTATTCATTCTCCTCATCTaGCCTAAAGTTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPWLLGDGWQPLVAERFLFILLI*PKVSCS
Trigger: TGAACAGGAAACTTTAGGGCAGATGAGGAGAATGAA...TAGGAACCTCTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAACCACGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGTTCATGCCATTCTCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKFMPFS*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAATGGCATGAA...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGCTCACTGCAATCTCTaGCTCCTGGGTTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFAHCNL*LLGSCH
Trigger: ATGGCATGAACCCAGGAGGCAGAGATTGCAGTGAGC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGGTCTTGTCTCAGGCATaGTGTGGGGCTGTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWVLSQA*CGAVQD
Trigger: ATCTTGCACAGCCCCACAGCATGCCTGAGACAAGAC...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTGIQGF*LPERCE
Trigger: CTCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR GCA 90 bp GACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCCCGTAGACATGGTAACTaGTTGCTGAACTCGCATGAA +
Preference number: 4 (lower is better)
Translates to: DEEAEQRNTTFPTVSWHARRHGN*LLNSHE
Trigger: TTCATGCGAGTTCAGCAAGCAGTTACCATGTCTACG...GGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp GAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCCGTAAACAGTATCCTGGCATaGCGTAGACATGGTAACTGC +
Preference number: 4 (lower is better)
Translates to: EEAEQRNTTFPTVSWHAVNSILA*RRHGNC
Trigger: GCAGTTACCATGTCTACGGCATGCCAGGATACTGTT...TACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR GCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGGACACGATGGGATCTaGCCGCTGGCTGCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKGHDGI*PLAAAR
Trigger: GCGCGCCGCAGCCAGCGGGCAGATCCCATCGTGTCC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCTCTCAGAAGCAGTCTTaGGGTCCATCAGGACACTCA +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTSQKQS*GPSGHS
Trigger: TGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGA...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGTTCTGAGTCATGTTCAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSESCSALQAYKAFAFRNPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...GTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp CTGGAGTCTTCATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LESSCTASSGLSKSKCRFPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...AAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGAAGACTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FHWKTTFQQGLALNDTWIPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGATGGCGCCGAGAACATaGGCCAAGATGGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLMAPRT*AKMARG
Trigger: CCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCAT...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGCTTTAATGCCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGGGCATAGGGCTGGATaGCGCCGAGAACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KGFNAISVFQRSLSLLCKGHRAG*RREHGP
Trigger: TGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCC...TTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGGCATTAAAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp AGGCATACAAGGCTTTTGCCTTCCGGAACGGTGTGCTGGAGTCTTCATGTACCGAAGCAAGTGCAGGTTTaGATGGCAGGGAACAAAGTT +
Preference number: 4 (lower is better)
Translates to: RHTRLLPSGTVCWSLHVPKQVQV*MAGNKV
Trigger: AACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTT...CGGTACATGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp ACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCTGAGTCATGTTCAGCTTCCGGAACGGTGTGCTaGAGTCTTCATGTACCGCTT +
Preference number: 4 (lower is better)
Translates to: TLSKTVPAVNESSESCSASGTVC*SLHVPL
Trigger: AAGCGGTACATGAAGACTCCAGCACACCGTTCCGGA...AGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGTTCTGAGTCATGTTCAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSESCSALQAYKAFAFRNARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...GTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCTCAGCAGTTCTGCTaGGGCCCACGGTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVAQQFC*GPRLEE
Trigger: TTCCTCTAACCGTGGGCCCCAGCAGAACTGCTGAGC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACAAATGGCCTCGACACTaGAATCAGCAGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDKWPRH*NQQLSW
Trigger: CCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGTTTGGGGGTCTGAAGTaGGCAGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKFGGLK*ADHLRS
Trigger: TGACCTCAAGTGATCTGCCCACTTCAGACCCCCAAA...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCAGGGATCCTGGGCCATaGTCTTCCACTCTGATAACC +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFRDPGP*SSTLIT
Trigger: GGTTATCAGAGTGGAAGACCATGGCCCAGGATCCCT...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGAAAGCTCAGGGATCCTaGGCCATGGTCTTCCACTCT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWKAQGS*AMVFHS
Trigger: AGAGTGGAAGACCATGGCCCAGGATCCCTGAGCTTT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCAAAGCTCAGGGATCCTaGGCCATGGTCTTCCACTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFKAQGS*AMVFHS
Trigger: AGAGTGGAAGACCATGGCCCAGGATCCCTGAGCTTT...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGTCTGGGCAAGTGCCTTaGGATGCCCTTGTCACTAGT +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVSGQVP*DALVTS
Trigger: ACTAGTGACAAGGGCATCCCAAGGCACTTGCCCAGA...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAACTCTGGGTGCCATaGTGGCCACTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHKLWVP*WPLLSP
Trigger: CGGAGACAGCAGTGGCCACCATGGCACCCAGAGTTT...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCCGCTGGCTACCTACTTaGGGAACATGGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFRWLPT*GTWLLT
Trigger: TGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCG...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTGTTGATTCTGGCATCTaGATAACCAAGAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLVDSGI*ITKKAA
Trigger: AGCAGCTTTCTTGGTTATCCAGATGCCAGAATCAAC...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGGCCCTGGAGGGCCTTGTAAGTAATTCTCAGAGCAATGGGAGGCCACTGAAGCGACCATGTTGTATGTaGGAGCAGTTACAGAATTGT +
Preference number: 4 (lower is better)
Translates to: WALEGLVSNSQSNGRPLKRPCCM*EQLQNC
Trigger: ACAATTCTGTAACTGCTCCCACATACAACATGGTCG...CTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACTCTGGCCCCACTGCTaGGACACCTGCGTGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKLWPHC*DTCVPR
Trigger: GCGCGGCACGCAGGTGTCCCAGCAGTGGGGCCAGAG...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642734.1
3UTR CAA 72 bp GCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTaGTCTAGAGTCACCCTTGCAATGACATTCACATGT +
Preference number: 4 (lower is better)
Translates to: APGELDGPSVCS*SRVTLAMTFTC
Trigger: ACATGTGAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
3UTR CAA 72 bp CCTGCTGTGAACGAAAGTTCTGAGTCATGTTCAGCTTaGCAGGCATACAAGGCTTTTGCCTTCCGGAACGGT +
Preference number: 4 (lower is better)
Translates to: PAVNESSESCSA*QAYKAFAFRNG
Trigger: ACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp GCAGGGAACAAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACATTCCTGTTTCTCTGTTaGCTGAACGGTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGNKVDEEAEQRNTTFPTFLFLC*LNGVEE
Trigger: CTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAA...TGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCAGATGGCGAGAGGGGTaGAGTTGGGCTTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPRWREG*SWAWIR
Trigger: CCGAATCCAAGCCCAACTTCACCCCTCTCGCCATCT...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCCTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLLSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGTACAGGGATGCTTCGTaGGGCACCCCCAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLYRDAS*GTPKAR
Trigger: CCTTGCTTTGGGGGTGCCTCACGAAGCATCCCTGTA...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCCTCGGTGAGAGGAAATaGACTGATATTCAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPLGERK*TDIQKD
Trigger: GTCTTTTTGAATATCAGTTCATTTCCTCTCACCGAG...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGCTGACTTTATAAAGTaGTGTGGGGCAGGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRADFIK*CGAGLS
Trigger: CGACAACCCTGCCCCACATCACTTTATAAAGTCAGC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGCTGACTTTATAAAGTaGTGTGGGGCAGGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSADFIK*CGAGLS
Trigger: CGACAACCCTGCCCCACATCACTTTATAAAGTCAGC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CAAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCCTGCTGTTGTCATTTTaGTGCTACAATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: QGAPGELDGPSVCSLSRVLLLSF*CYNYRE
Trigger: CTCTCTGTAATTGTAGCATCAAAATGACAACAGCAG...GACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTAGGACTGGCTCTGAATaGCACCTGGATTCTATGGCC +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSRTGSE*HLDSMA
Trigger: GGCCATAGAATCCAGGTGTCATTCAGAGCCAGTCCT...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAAACTTCCGCTTCGCTaGAGACAAATCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLKLPLR*RQIFSQ
Trigger: TTGGGAAAAGATTTGTCTTCAGCGAAGCGGAAGTTT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR GCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGGTCTTGTCCAGCTCTaGTTCGTGCGACTTGAGCGT +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHGLVQL*FVRLER
Trigger: ACGCTCAAGTCGCACGAAGCAGAGCTGGACAAGACC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTCTCATCATCTGTTTCTaGATCTCCTATGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLLIICF*ISYALK
Trigger: TTTCAGTGCATAGGAGATGCAGAAACAGATGATGAG...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGCCCTGGCCTGTCTACTaGTTCCACATCAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKPWPVY*FHIKAK
Trigger: TTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGG...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGTCTTCCGACAAAGCTTaGATGGTGATAACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWSSDKA*MVITPG
Trigger: GCCAGGGGTTATCACCATGCAAGCTTTGTCGGAAGA...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGATTCGATACAGCCCTTaGTCGTTGATCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKIRYSP*SLIPLV
Trigger: AACCAGAGGGATCAACGAGCAAGGGCTGTATCGAAT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAACACTCAGCAACTTCTaGACTCTGGAGTTGACACCC +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTTLSNF*TLELTP
Trigger: GGGTGTCAACTCCAGAGTGCAGAAGTTGCTGAGTGT...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCACCACACCAAGGTTTaGCACCGTCATCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTHHTKV*HRHQIL
Trigger: CAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGGATGTCCATGATGGCTaGTACTGTTTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKDVHDG*YCFFLR
Trigger: CCTCAGGAAGAAACAGTAGCAGCCATCATGGACATC...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCGGGGCTTGGAGTCACTaGTCTTCTTCCGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLGAWSH*SSSETG
Trigger: ACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCC...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGCAGCAAAAACCAAACAAACCCTaGAACAGACCTGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: PFFKDHSRCSVKRGLWQQKPNKP*NRPDGG
Trigger: TCCCCCGTCAGGTCTGTTGCAGGGTTTGTTTGGTTT...TTGCTGCCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000421521.5
CDS-3UTR GCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCCTGTCAAAAAGCAAGTaGAGGTTTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTLSKSK*RFGWQG
Trigger: TCCCTGCCATCCAAACCTGCACTTGCTTTTTGACAG...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGTTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGACTCTGAAGCAACGCTaGCATCCAAGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLTLKQR*HPRGSW
Trigger: CCAGGAGCCCCTTGGATGGCAGCGTTGCTTCAGAGT...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAAATGTCTACAGGGATaGTTCGTGAGGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSKCLQG*FVRHPQ
Trigger: TTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTT...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAAATGTCTACAGGGATaGTTCGTGAGGCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVKCLQG*FVRHPQ
Trigger: TTGGGGGTGCCTCACGAAGCATCCCTGTAGACATTT...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAAGAGGGAGGGACATaGTTCCAAGCAGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQQEGGT*FQAVKL
Trigger: CAGCTTCACTGCTTGGAAGCATGTCCCTCCCTCTTG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCTTCATTCTTTCTCTTTaGCTCTCACCGAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPFILSL*LSPKST
Trigger: AGTGCTTTTCGGTGAGAGGCAAAGAGAAAGAATGAA...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGGCAGCTCTGGGCAAGTaGCTTGGGATGCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLAALGK*LGMPLS
Trigger: TGACAAGGGCATCCCAAGGCACTTGCCCAGAGCTGC...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTGCTTTTGGAGCCTCTaGAGTCAAGACAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLCFWSL*SQDRAF
Trigger: AAAAGCTCTGTCTTGACTGCAGAGGCTCCAAAAGCA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCGATTCGCTGCTCTGCTaGTGTTGTCATTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLDSLLC*CCHFDA
Trigger: AGCATCAAAATGACAACAGCAGCAGAGCAGCGAATC...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGCACTCTGGCCCCACTaGTGGGACACCTGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKALWPH*WDTCVP
Trigger: CGGCACGCAGGTGTCCCAGCAGTGGGGCCAGAGTGC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGAGTCCCCGAAATCCTTaGCCAGTTCGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWSPRNP*PVRNHG
Trigger: ACCATGGTTACGAACTGGCCAAGGATTTCGGGGACT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCAGTCCCCGAAATCCTTaGCCAGTTCGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVSPRNP*PVRNHG
Trigger: ACCATGGTTACGAACTGGCCAAGGATTTCGGGGACT...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCATGGTGATAACCCCTaGCCTGTCTACTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFHGDNP*PVYCFH
Trigger: GTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAATCTCAGAAGCAGTCTTaGGGTCCATCAGGACACTCA +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKSQKQS*GPSGHS
Trigger: TGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGA...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCGCAACATTTGCCAAGTaGTTCATGAGCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLATFAK*FMSSCN
Trigger: GTTACAGCTGCTCATGAACCACTTGGCAAATGTTGC...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACGAGACAGGTGCAGCTaGGCATTGGTGAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVRDRCS*ALVRGI
Trigger: TATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGTGCAGGACGGGGGCTTaGAGTCACTGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLCRTGA*SHCSSS
Trigger: GGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCA...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGCTTTAATGCCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAATGGCGCCGAGAACATaGGCCAAGATGGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KGFNAISVFQRSLSLLCKMAPRT*AKMARG
Trigger: CCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCAT...TTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGGCATTAAAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATCGGGGGATGAGTCGCTaGACGTGGATGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYRGMSR*TWMRWA
Trigger: TGCCCACCTCATCCACGTCCAGCGACTCATCCCCCG...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR CCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACAAGCAAGTGCAGGTTTaGATGGCAGGGAACAAAGTT +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDKQVQV*MAGNKV
Trigger: AACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTT...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274498.9
CDS-3UTR CCA 90 bp CTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCATGTACCGCTTCTTCTaGCCTGTCAAAAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLRWVNVIEDRACCERKFMYRFF*PVKKQV
Trigger: CACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACAT...GAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR CCA 90 bp GAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATGCCGTAATGTACCGCTTCTTCTaGCCTGTCAAAAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: EEAEQRNTTFPTVSWHAVMYRFF*PVKKQV
Trigger: CACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACAT...TACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGTCCGGAACGGTGTGCTaGAGTCTTCATGTACCGCTT +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKSGTVC*SLHVPL
Trigger: AAGCGGTACATGAAGACTCCAGCACACCGTTCCGGA...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000443674.5
CDS-3UTR CCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGGCCAGGCTCCTGAGATaGGTGAACGTTATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKARLLR*VNVIED
Trigger: GTCTTCGATAACGTTCACCCATCTCAGGAGCCTGGC...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACTTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHLLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGCAGAGATGGGTGAATaGGAGGACATGGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQAEMGE*EDMGKP
Trigger: TGGTTTCCCCATGTCCTCCCATTCACCCATCTCTGC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACAGAGGCAGGCAAGGGTaGGAGCAGAGATGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHRGRQG*EQRWVN
Trigger: ATTCACCCATCTCTGCTCCCACCCTTGCCTGCCTCT...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAATCTATACCCCTCCTaGAGTCTTCCTCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLNLYPS*SLPLLL
Trigger: CAAAAGAAGAGGAAGACTCCAGGAGGGGTATAGATT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAAAGTTCGAGATCAGCCTaGCAAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKSSRSA*QTWQNP
Trigger: GGGGTTTTGCCATGTTTGCCAGGCTGATCTCGAACT...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCATTGGCAGCAGCTCATaGGCACTGCACAGACACACG +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLIGSSS*ALHRHT
Trigger: CGTGTGTCTGTGCAGTGCCCATGAGCTGCTGCCAAT...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTCTCTGGGTGCCATGGTaGCCACTGCTGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFLWVPW*PLLSPG
Trigger: TCCCGGAGACAGCAGTGGCCACCATGGCACCCAGAG...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCTACTTGGGCAAACTCTaGGTGCCATGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLYLGKL*VPWWPL
Trigger: CAGTGGCCACCATGGCACCCAGAGTTTGCCCAAGTA...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCTCCATTCTCACGGTTaGGCACTCAAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKLHSHG*ALKAEQ
Trigger: TTGCTCAGCCTTGAGTGCCCAACCGTGAGAATGGAG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642734.1
3UTR CAA 72 bp CACAATCTATACCCCTCCTGGAGTCTTCCTCTTCTTTaGGGATCACGGGAATTGGAGGTGAAAGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HNLYPSWSLPLL*GSRELEVKGKS
Trigger: ACTCTTCCCTTTCACCTCCAATTCCCGTGATCCCAAAAGAAGAGGAAGACTCCAGGAGGGGTATAGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
3UTR CAA 72 bp AGAGGCTGTTTGGTTTCTGCAGCGCTGGCTACCTACTaGGGGAACATGGTTGCTCACAAAACATTCAGTACT +
Preference number: 4 (lower is better)
Translates to: RGCLVSAALATY*GNMVAHKTFST
Trigger: AGTACTGAATGTTTTGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCGCTGCAGAAACCAAACAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGGACTTCCTGCACCTTaGAGACATATTCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVGLPAP*RHIPGI
Trigger: TATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGAAACTGGTACATCATaGGTGGTCCTGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVETGTS*VVLEAF
Trigger: GAATGCTTCCAGGACCACTCATGATGTACCAGTTTC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGTTCTCTGGGAGCCGATaGACAAGGCTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKFSGSR*TRLWIS
Trigger: TGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAA...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTTCTCTGGGAGCCGATaGACAAGGCTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQFSGSR*TRLWIS
Trigger: TGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCTTCTCTGGGAGCCGATaGACAAGGCTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFFSGSR*TRLWIS
Trigger: TGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAA...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGATTCCTGTTTCTCTGTTaGCTGAACGGTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRFLFLC*LNGVEE
Trigger: CTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAA...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACACAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACACCTTGGGTTTCTTCCTaGATCACAATGGCCTATATT +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETPWVSS*ITMAYI
Trigger: AATATAGGCCATTGTGATTCAGGAAGAAACCCAAGG...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp GCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAGCAAAGCCTAAGTGTGTaGGCAACTAACTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: AHPLRPPFPKVFLSSGSQQSLSV*ATNLKN
Trigger: ATTCTTTAAGTTAGTTGCTCACACACTTAGGCTTTG...CTGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCATCTCTTTCTGGCCTaGTATCTTGGGGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQHLFLA*YLGGTK
Trigger: CTTGGTACCCCCAAGATATCAGGCCAGAAAGAGATG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAAGTAGTGAATCACCATaGCAAACCCCTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESSSESP*QTPVNF
Trigger: AAAGTTAACAGGGGTTTGTCATGGTGATTCACTACT...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGCTCCAGGTAAGTTTATaGTGGGACAGATTACAACTT +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLLQVSL*WDRLQL
Trigger: AAGTTGTAATCTGTCCCATCATAAACTTACCTGGAG...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACCTTCCGGAACGGTGTaGGTGAGTTGGGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKPSGTV*VSWAGW
Trigger: CCACCCGGCCCAACTCACTCACACCGTTCCGGAAGG...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418236.5
ENST00000642734.1
CDS-3UTR TCA 90 bp AAAGTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGATGGTAACTGCTTGCTaGACTCGCATGAACCCTTGT +
Preference number: 4 (lower is better)
Translates to: KVDEEAEQRNTTFPTVSWMVTAC*TRMNPC
Trigger: ACAAGGGTTCATGCGAGTTCAGCAAGCAGTTACCAT...CCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR TCA 90 bp TTTCCTCCTGCTCTCAACAATACCTATAGGATTTATGATGACGACCATGTTGTATGTCAAGTGAGGGCGTaGGGTCAGAGGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FPPALNNTYRIYDDDHVVCQVRA*GQRGRN
Trigger: GTTCCTGCCCCTCTGACCTCACGCCCTCACTTGACA...TACAACATGGTCGTCATCATAAATCCTATAGGTATTGTTGAGAGCAGGAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR TCA 90 bp TGGCAGGTTGGATTTGACGGGCAGGTCATAGTTTGCCGACCTTGCTTGAGAACAAACATGAAGAAGGCATaGGGCTGTAGTATGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WQVGFDGQVIVCRPCLRTNMKKA*GCSMSS
Trigger: ACTTGACATACTACAGCCTCATGCCTTCTTCATGTT...TGTTCTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR TCA 90 bp CCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGCAGCAACCTTGCTTGAGAACATaGAGAAGGCATGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PFFKDHSRCSVKRGLWQQPCLRT*RRHEAV
Trigger: TACAGCCTCATGCCTTCTTCATGTTCTCAAGCAAGG...TTGCTGCCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCAGCAGCTGTAACATCTaGCGATTTTTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVSSCNI*RFFSGS
Trigger: GCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCT...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATGTCCATGATGGCTaGTACTGTTTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRDVHDG*YCFFLR
Trigger: CCTCAGGAAGAAACAGTAGCAGCCATCATGGACATC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CTCCTGAGATGGGTGAACGTTATCGAAGACCGTGCCTGCTGTGAACGAAAGTTCAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLRWVNVIEDRACCERKFSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...GAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGTTCACCCATCTCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR GCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCTTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGATAACTCTGTTGTTTaGAGGCCAAGTGAATTTGAA +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPDNSVV*RPSEFE
Trigger: TTCAAATTCACTTGGCCTGCAAACAACAGAGTTATC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTGATAACTCTGTTGTTTaGAGGCCAAGTGAATTTGAA +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLDNSVV*RPSEFE
Trigger: TTCAAATTCACTTGGCCTGCAAACAACAGAGTTATC...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCCCAAAGCCCAAGGGATaGTTAAAAACACATAAAGAC +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPPKPKG*LKTHKD
Trigger: GTCTTTATGTGTTTTTAAGCATCCCTTGGGCTTTGG...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACTCATTGCCTGGAGATaGTCTTCCCATCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTLIAWR*SSHLQI
Trigger: GATTTGGAGATGGGAAGAGCATCTCCAGGCAATGAG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGTCAGTCATCCAGACTTaGTTTTGGGAGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVSVIQT*FWEQKP
Trigger: TGGCTTCTGCTCCCAAAAGCAAGTCTGGATGACTGA...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGAGGCTGTTTGGTTTCTaGAGCGCTGGCTACCTACTT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQRLFGF*SAGYLL
Trigger: AAGTAGGTAGCCAGCGCTGCAGAAACCAAACAGCCT...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCCTGTGCAAGATTCGCTaGTCTGCTGCTGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVLCKIR*SAAVVI
Trigger: AATGACAACAGCAGCAGAGCAGCGAATCTTGCACAG...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACATGCTGTGGGGCTGTaGAAGATTCGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSHAVGL*KIRCSA
Trigger: AGCAGAGCAGCGAATCTTGCACAGCCCCACAGCATG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCCCAGGTCTGGGTCACTaGAGTTCATGTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLPGLGH*SSCWAV
Trigger: TACAGCCCAACATGAACTCCAGTGACCCAGACCTGG...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GTTGACGAGGAGGCTGAACAACGGAATACTACCTTCCCAACAGTATCCTGGCATAAGCAAGTGCAGGTTTaGATGGCAGGGAACAAAGTT +
Preference number: 4 (lower is better)
Translates to: VDEEAEQRNTTFPTVSWHKQVQV*MAGNKV
Trigger: AACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTT...ATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTTGTTCAGCCTCCTCGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACTCCGGAACGGTGTGCTaGAGTCTTCATGTACCGCTT +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHSGTVC*SLHVPL
Trigger: AAGCGGTACATGAAGACTCCAGCACACCGTTCCGGA...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000443674.5
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCAAATGGCCTCGACACTaGAATCAGCAGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFKWPRH*NQQLSW
Trigger: CCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGCCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGCCTCTTTCTGAAGGTTaGGCGTTTGGACCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKPLSEG*AFGPLK
Trigger: TTTCAACGGTCCAAACGCCCAACCTTCAGAAAGAGG...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGCAGAGATGGGTGAATaGGAGGACATGGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHAEMGE*EDMGKP
Trigger: TGGTTTCCCCATGTCCTCCCATTCACCCATCTCTGC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTAATGACATTCACATGTaGAAGATACGGATAACTCTG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLNDIHM*KIRITL
Trigger: CAGAGTTATCCGTATCTTCCACATGTGAATGTCATT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGGACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTAAGCCTCAGAAGATGTaGAGAAAAAGAAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGHGETSQMASPIGRQHLKPQKM*RKRSKE
Trigger: CTCTTTACTTCTTTTTCTCCACATCTTCTGAGGCTT...AAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACTGTCTCGCTTGCTCCTaGGTGAGTTCCCGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHCLACS*VSSRKR
Trigger: TCTTTTCCGGGAACTCACCCAGGAGCAAGCGAGACA...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCTGGCTAAGTGATCCCTaGGTCTTACAAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAWLSDP*VLQRKL
Trigger: CAGTTTCCTTTGTAAGACCCAGGGATCACTTAGCCA...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGCAATCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHAISAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGATTGC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCCCTTGTCACTAGTATaGCTCTGTCCTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFPLSLV*LCPANA
Trigger: GGCATTAGCAGGACAGAGCCATACTAGTGACAAGGG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGTACAGGTGCTTCCACTaGAAGACCACATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKYRCFH*KTTFQQ
Trigger: TTGCTGAAATGTGGTCTTCCAGTGGAAGCACCTGTA...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GTCTTCATGTACCGCTTCTTCTGGCCTGTCAAAAAGCAAGTGCAGGTTTGGATGTTCCCAACAGTATCCTaGCATGCCGTAGACATGGTA +
Preference number: 4 (lower is better)
Translates to: VFMYRFFWPVKKQVQVWMFPTVS*HAVDMV
Trigger: TACCATGTCTACGGCATGCCAGGATACTGTTGGGAA...CATCCAAACCTGCACTTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424007.1
CDS-3UTR CCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGTTGTTAGGTGACAGGTaGCAGGTTGGATTTGACGGG +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWLLGDR*QVGFDG
Trigger: CCCGTCAAATCCAACCTGCCACCTGTCACCTAACAA...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCGAGCTGTGGACACGATaGGATCTGCCCGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WILYKQCFNPLHPACKQIELWTR*DLPAGC
Trigger: GCAGCCAGCGGGCAGATCCCATCGTGTCCACAGCTC...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642734.1
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTCATCTTCAAGATTCCTaGGGACAGTGGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSHLQDS*GQWQTP
Trigger: AGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATG...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTTGGTTAACTGTGTCTTaGAGTCCCCGAAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSWLTVS*SPRNPW
Trigger: CCAAGGATTTCGGGGACTTCAAGACACAGTTAACCA...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTCTGCACTCTGGAGTTaGCACCCACAATTCGATACA +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQSALWS*HPQFDT
Trigger: TGTATCGAATTGTGGGTGTCAACTCCAGAGTGCAGA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGTCTGCACTCTGGAGTTaGCACCCACAATTCGATACA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKSALWS*HPQFDT
Trigger: TGTATCGAATTGTGGGTGTCAACTCCAGAGTGCAGA...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACTGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KQKQWIQPGSQRQFLHPAQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...GGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGCTTTTCTTGCAGTACTaGTGCATGTTGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWLFLQY*CMLAEM
Trigger: CATCTCAGCCAACATGCATCAGTACTGCAAGAAAAG...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGACTTTTCTTGCAGTACTaGTGCATGTTGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRLFLQY*CMLAEM
Trigger: CATCTCAGCCAACATGCATCAGTACTGCAAGAAAAG...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTLSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCCTCTCCTCTGCTGATTaGCTTCTTTTCTTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFLSSAD*LLFLQY
Trigger: GTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAG...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTACCGTTGAAACAAAATaGGTGCCCCCTATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSTVETK*VPPIQG
Trigger: ACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGT...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACTGACTTCCTCTTTCTaGAGGTTGGGCGTTTGGACC +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSLTSSF*RLGVWT
Trigger: GGTCCAAACGCCCAACCTTCAGAAAGAGGAAGTCAG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCGGGACTATTTCTATCTaGCTTCCTCTTTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTGTISI*LPLSEG
Trigger: ACCTTCAGAAAGAGGAAGTCAGATAGAAATAGTCCC...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGAGTCACCCTTGCAATaGCATTCACATGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSESPLQ*HSHVED
Trigger: ATCTTCCACATGTGAATGTCATTGCAAGGGTGACTC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTACTATCCCATCTGCCTCAAGTAGACCACCCTAATTCCTTGATCCTGTGCTTCGAGTCACCCTTGCAATaGCATTCACATGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLSHLPQVDHPNSLILCFESPLQ*HSHVED
Trigger: ATCTTCCACATGTGAATGTCATTGCAAGGGTGACTC...GAAGCACAGGATCAAGGAATTAGGGTGGTCTACTTGAGGCAGATGGGATAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCAAACAGGAAACACTCTaGAGCAACGCTGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFKQETL*SNAAIQ
Trigger: TTGGATGGCAGCGTTGCTTCAGAGTGTTTCCTGTTT...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACACAAAGCCTAAGTGTGTaGGCAACTAACTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTQSLSV*ATNLKN
Trigger: ATTCTTTAAGTTAGTTGCTCACACACTTAGGCTTTG...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CAAGATTCGCTGCTCTGCTGCTGTTGTCATTTTGATGCTACAATTACAGAGAGGCAGGCTATGGCTAAGTaGTCCCTGGGTCTTACAAAG +
Preference number: 4 (lower is better)
Translates to: QDSLLCCCCHFDATITERQAMAK*SLGLTK
Trigger: CTTTGTAAGACCCAGGGATCACTTAGCCATAGCCTG...CCTCTCTGTAATTGTAGCATCAAAATGACAACAGCAGCAGAGCAGCGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACAGAAGGCCTTCCCTTTaGGCCGCAGGTATGGCACAC +
Preference number: 4 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDRRPSL*AAGMAH
Trigger: GTGTGCCATACCTGCGGCTCAAAGGGAAGGCCTTCT...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACTGCTCCAGGTAACTaGCATTTTGTTTATCAATAC +
Preference number: 4 (lower is better)
Translates to: PAPAGLATQCALRDYFYLTAPGN*HFVYQY
Trigger: GTATTGATAAACAAAATGTCAGTTACCTGGAGCAGT...CAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGAAAGTGAAGAGTCCTTaGAGGAAGGCCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLKVKSP*RKASRG
Trigger: GCCTCTGCTGGCCTTCCTGCAAGGACTCTTCACTTT...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCCCTGGCCTGTCTACTaGTTCCACATCAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKPWPVY*FHIKAK
Trigger: TTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCATTCGATACAGCCCTTaGTCGTTGATCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFIRYSP*SLIPLV
Trigger: AACCAGAGGGATCAACGAGCAAGGGCTGTATCGAAT...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACACACTCAGCAACTTCTaGACTCTGGAGTTGACACCC +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHTLSNF*TLELTP
Trigger: GGGTGTCAACTCCAGAGTGCAGAAGTTGCTGAGTGT...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACAAAAGCAATGGATCCAGCCTGGATCTCAGCGCCAATTTCTTCACCCAGCCCCGTTCTCCAGTTTTGCTaGTTTGATGAAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TKAMDPAWISAPISSPSPVLQFC*FDETSL
Trigger: CAAAGAAGTTTCATCAAAGCAGCAAAACTGGAGAAC...GGGGCTGGGTGAAGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AGCCCCAGCAGGCTTAGCTACACAGTGTGCTCTCAGGGACTATTTCTATCTGACCTGGTTCTCCAGTTTTaGTGCTTTGATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SPSRLSYTVCSQGLFLSDLVLQF*CFDETS
Trigger: AGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAG...GTCAGATAGAAATAGTCCCTGAGAGCACACTGTGTAGCTAAGCCTGCTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCACCACACCAAGGTTTaGCACCGTCATCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQHHTKV*HRHQIL
Trigger: CAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCCACCACACCAAGGTTTaGCACCGTCATCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFHHTKV*HRHQIL
Trigger: CAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTG...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGGGCATACAAGGCTTTTaGCTTCCGGAACGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLGIQGF*LPERCA
Trigger: AGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCC...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000645722.2
CDS-3UTR GCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCAGAGTCAGTCACGCTaGATTTCTCAGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKQSQSR*ISQWQR
Trigger: TCTTTGCCACTGAGAAATGCAGCGTGACTGACTCTG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCTTGAAACAAAATGAGTaGCCCCTATTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTLKQNE*PLFRVL
Trigger: GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAA...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTGTGTGTGTGTTCCCGTaGATGAGAAGACTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSVCVFP*MRRLDC
Trigger: ACAATCCAGTCTTCTCATGCACGGGAACACACACAC...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGCTCATTGCCTGGAGATaGTCTTCCCATCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKLIAWR*SSHLQI
Trigger: GATTTGGAGATGGGAAGAGCATCTCCAGGCAATGAG...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCGATTCGCTGCTCTGCTaGTGTTGTCATTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSDSLLC*CCHFDA
Trigger: AGCATCAAAATGACAACAGCAGCAGAGCAGCGAATC...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAAGTCCCCGAAATCCTTaGCCAGTTCGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVSPRNP*PVRNHG
Trigger: ACCATGGTTACGAACTGGCCAAGGATTTCGGGGACT...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCGCAACATTTGCCAAGTaGTTCATGAGCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVATFAK*FMSSCN
Trigger: GTTACAGCTGCTCATGAACCACTTGGCAAATGTTGC...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGGCTCCTGGGGAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCAATCAAATTCTGCTTGTaGTTGTTAGCAACATTTGCC +
Preference number: 4 (lower is better)
Translates to: KGLLGSLTVHRFVVCLESIKFCL*LLATFA
Trigger: GGCAAATGTTGCTAACAACCACAAGCAGAATTTGAT...TGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTCCCCAGGAGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACGCTGCATTTCTCAGTaGCAAAGAGAAATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVRCISQ*QREMAS
Trigger: CGAGGCCATTTCTCTTTGCCACTGAGAAATGCAGCG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGCAATGGATCCAGCCTaGATCTCAGCGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHAMDPA*ISAPIS
Trigger: AGAAATTGGCGCTGAGATCCAGGCTGGATCCATTGC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTCAAGTACTGAGAGGTaGGGTAGAGAGAGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQSSTER*GRESAY
Trigger: ATAGGCACTCTCTCTACCCCACCTCTCAGTACTTGA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GACATGGGGAAACCAGTCAGATGGCATCACCCATTGGGAGGCAGCATCTTACCCGAGATGGTGAGAGATTaGATCTTATATAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: DMGKPVRWHHPLGGSILPEMVRD*ILYKQC
Trigger: ACACTGTTTATATAAGATCCAATCTCTCACCATCTC...GGGTAAGATGCTGCCTCCCAATGGGTGATGCCATCTGACTGGTTTCCCCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCCTTCCTGAATCACAATaGCCTATATTAGTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLLPESQ*PILVSS
Trigger: GCTTGAGACTAATATAGGCCATTGTGATTCAGGAAG...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGATCTGGCCTGATATCTTaGGGGTACCAAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRSGLIS*GYQEIH
Trigger: GTGTATTTCTTGGTACCCCCAAGATATCAGGCCAGA...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGTCTGGCCTGATATCTTaGGGGTACCAAGAAATACAC +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKSGLIS*GYQEIH
Trigger: GTGTATTTCTTGGTACCCCCAAGATATCAGGCCAGA...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TGCACATCCCCTGAGGCCTCCATTTCCCAAGGTCTTCTTGTCCTCAGGTTCACAAAGCCTCAGAAGATGTaGAGAAAAAGAAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: CTSPEASISQGLLVLRFTKPQKM*RKRSKE
Trigger: CTCTTTACTTCTTTTTCTCCACATCTTCTGAGGCTT...TGTGAACCTGAGGACAAGAAGACCTTGGGAAATGGAGGCCTCAGGGGATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCAAAAGATTCAGGCTATaGCTAAGTGATCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVKRFRL*LSDPWV
Trigger: GACCCAGGGATCACTTAGCCATAGCCTGAATCTTTT...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAAAAAAGATTCAGGCTATaGCTAAGTGATCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKKRFRL*LSDPWV
Trigger: GACCCAGGGATCACTTAGCCATAGCCTGAATCTTTT...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTACATCTTCAAGATTCCTaGGGACAGTGGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVHLQDS*GQWQTP
Trigger: AGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATG...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTATCTGCACTCTGGAGTTaGCACCCACAATTCGATACA +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVSALWS*HPQFDT
Trigger: TGTATCGAATTGTGGGTGTCAACTCCAGAGTGCAGA...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGAAACTGGTACATCATaGGTGGTCCTGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVETGTS*VVLEAF
Trigger: GAATGCTTCCAGGACCACTCATGATGTACCAGTTTC...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATGCTACTGTTTCTTCCTaGGGCCTCAGCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYATVSS*GLSRVG
Trigger: ACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGC...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGTGTTTCTCTGTTGACTaGACGGTGTGGAAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLCFSVD*TVWKSV
Trigger: GACGCTCTTCCACACCGTTCAGTCAACAGAGAAACA...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTATTCCTGTTTCTCTGTTaGCTGAACGGTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVFLFLC*LNGVEE
Trigger: CTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAA...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AGTTCTGAGTCATGTTCAGCTTTGCAGGCATACAAGGCTTTTGCCTTCCGGAACTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SSESCSALQAYKAFAFRNCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...GTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419676.5
CDS-3UTR TCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCCAGAAACATTCATGTTaGCAGGTAGCAACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSQKHSC*QVATES
Trigger: TGACTCTGTTGCTACCTGTCAACATGAATGTTTCTG...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGATATTCAGGGTACTCATaGGAAAACGGCTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRYSGYS*ENGFAS
Trigger: ACTTGCAAAGCCGTTTTCTCATGAGTACCCTGAATA...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCGTGTGTTCCCGTGCATaGGAAGACTGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLVCSRA*EDWIVS
Trigger: AGATACAATCCAGTCTTCTCATGCACGGGAACACAC...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGAGTCACCCTTGCAATaGCATTCACATGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQESPLQ*HSHVED
Trigger: ATCTTCCACATGTGAATGTCATTGCAAGGGTGACTC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ATACACCTGAGAAGAAAGACAAAAACTCGAATGCCTGACCCCACTTATTTAAATAGAAGGCCTTCCCTTTaGGCCGCAGGTATGGCACAC +
Preference number: 4 (lower is better)
Translates to: IHLRRKTKTRMPDPTYLNRRPSL*AAGMAH
Trigger: GTGTGCCATACCTGCGGCTCAAAGGGAAGGCCTTCT...ATTTAAATAAGTGGGGTCAGGCATTCGAGTTTTTGTCTTTCTTCTCAGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAAGACAGAGCTTTTACTaGGACAGCAGTTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRRQSFY*DSSCHF
Trigger: AAAATGGCAACTGCTGTCTCAGTAAAAGCTCTGTCT...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCACAGTGGCAAACTCCTaGAAAGATCTTGCTATACAC +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSTVANS*KDLAIH
Trigger: GTGTATAGCAAGATCTTTGCAGGAGTTTGCCACTGT...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGAGGTTACTAGGGTGTaGTCCAAATATATTCCGATG +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVREVTRV*SKYIPM
Trigger: CATCGGAATATATTTGGAGCACACCCTAGTAACCTC...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGAGATTGGTCTATGCTAAGCCTTTaGTCTCTAAAGCATTCCACC +
Preference number: 4 (lower is better)
Translates to: LYLTDDRPTAALEMVRDWSMLSL*SLKHST
Trigger: GGTGGAATGCTTTAGAGAGCAAAGGCTTAGCATAGA...CCAATCTCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GGAGAAACGCAGGGTGTGTGTGTTCCCGTGCATGAGAAGACTGGATTGTATCTCGGGTTTGATCTTTCTTaGGACATGACTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GETQGVCVPVHEKTGLYLGFDLS*DMTLSK
Trigger: CTTACTTAAAGTCATGTCGCAAGAAAGATCAAACCC...GAGATACAATCCAGTCTTCTCATGCACGGGAACACACACACCCTGCGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGAAAGATCACTCTCGCTaGTCTGTAAAGAGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWKDHSR*SVKRGL
Trigger: TAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTT...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGTCTCAGAAGCAGTCTTaGGGTCCATCAGGACACTCA +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLSQKQS*GPSGHS
Trigger: TGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGA...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WILYKQCFNPLHPACKQIERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ATACACCTGAGAAGAAAGACAAAAACTCGAATGCCTGACCCCACTTATTTAAATGAGAGGTTCCTAGCCTaGGAGGGAGAAACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: IHLRRKTKTRMPDPTYLNERFLA*EGETQG
Trigger: ACCCTGCGTTTCTCCCTCCCAGGCTAGGAACCTCTC...ATTTAAATAAGTGGGGTCAGGCATTCGAGTTTTTGTCTTTCTTCTCAGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTTGGGCGTTTGGACCGTTGAAACAAAATGAGTGCCCCCTATTCAGGGTACTCAATGACATTCACATGTaGAAGATACGGATAACTCTG +
Preference number: 4 (lower is better)
Translates to: GWAFGPLKQNECPLFRVLNDIHM*KIRITL
Trigger: CAGAGTTATCCGTATCTTCCACATGTGAATGTCATT...GAGTACCCTGAATAGGGGGCACTCATTTTGTTTCAACGGTCCAAACGCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGGAAAAACTCATTGCCTaGAGATGCTCTTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQEKLIA*RCSSHL
Trigger: GAGATGGGAAGAGCATCTCCAGGCAATGAGTTTTTC...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGCATGGATAGGGGAGAGAGTAAAATCTTTAGTCTTCAAGTTCCTTCCTACTCACACTGCACCCGGCCATaGCATTCTTTAGCTACGAAA +
Preference number: 4 (lower is better)
Translates to: GMDRGESKIFSLQVPSYSHCTRP*HSLATK
Trigger: TTTCGTAGCTAAAGAATGCCATGGCCGGGTGCAGTG...TGAGTAGGAAGGAACTTGAAGACTAAAGATTTTACTCTCTCCCCTATCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCCCTTGTCACTAGTATaGCTCTGTCCTGCTAATGCC +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLPLSLV*LCPANA
Trigger: GGCATTAGCAGGACAGAGCCATACTAGTGACAAGGG...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACATCCAGACTTGCTTTTaGGAGCAGAAGCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHIQTCF*EQKPED
Trigger: ATCCTCTGGCTTCTGCTCCCAAAAGCAAGTCTGGAT...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAAAACATTCAGTACTTaGGCAAACTCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSKTFST*ANSGCH
Trigger: ATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTT...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTGACACCAGCACAGGGTaGGTGAGAAGACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTDTSTG*VRRHPA
Trigger: AGCAGGATGTCTTCTCACCCACCCTGTGCTGGTGTC...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATGTCTCAGGCATGCTGTaGGGCTGTGCAAGATTCGCT +
Preference number: 4 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYVSGML*GCARFA
Trigger: AGCGAATCTTGCACAGCCCCACAGCATGCCTGAGAC...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGACAAAGCTCCTTAGGATaGTTCACCTTTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRQSSLG*FTFLFL
Trigger: GAGAAAGAGAAAGGTGAACCATCCTAAGGAGCTTTG...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGAAGTGCCAGCTCATGTaGGTCTCTGTAAGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKKCQLM*VSVSVY
Trigger: ATAGACACTTACAGAGACCCACATGAGCTGGCACTT...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGGAATTTGAAAGGTCACTGGCAAGGCTGGTTAAAAGCAGACCAGTGTCAGCGAAATTTGAAAGGTCACTaGCAAGGCTGGTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GNLKGHWQGWLKADQCQRNLKGH*QGWLKA
Trigger: TGCTTTTAACCAGCCTTGCCAGTGACCTTTCAAATT...TCGCTGACACTGGTCTGCTTTTAACCAGCCTTGCCAGTGACCTTTCAAATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425417.2
CDS-3UTR TCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCAAACTTCCGCTTCGCTaGAGACAAATTCTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPKLPLR*RQILER
Trigger: GCGCTCAAGAATTTGTCTTCAGCGAAGCGGAAGTTT...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTCCTTGGGTTTCTTCCTaGATCACAATGGCCTATATT +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSPWVSS*ITMAYI
Trigger: AATATAGGCCATTGTGATTCAGGAAGAAACCCAAGG...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGAAAAACTCGAATGCCTaGCCCCACTTATTTAAATCC +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKKNSNA*PHLFKS
Trigger: GGATTTAAATAAGTGGGGTCAGGCATTCGAGTTTTT...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGGACGCACACAAAATTTaGAAACTAGCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVDAHKI*KLACPH
Trigger: ATGTGGACAAGCTAGTTTTCAAATTTTGTGTGCGTC...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCTTGAGCTGATAAACTaGGTAGTGAATCACCATGAC +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQLELIN*VVNHHD
Trigger: GTCATGGTGATTCACTACTCAGTTTATCAGCTCAAG...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTAGTGGGCAGATCACTTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTSGQIT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAAGTGATCTGCCCACT...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTAGTGGGCAGATCACTTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFSGQIT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAAGTGATCTGCCCACT...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACATTCAGACAGAGCTTTTACTaGGACAGCAGTTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: LDGPSVCSLSRVTLAMTFRQSFY*DSSCHF
Trigger: AAAATGGCAACTGCTGTCTCAGTAAAAGCTCTGTCT...GAATGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTTGTCAGATACAAGGTTaGTTCTGGCATCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSCQIQG*FWHLDN
Trigger: GTTATCCAGATGCCAGAATCAACCTTGTATCTGACA...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp AAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGTGTCAGATACAAGGTTaGTTCTGGCATCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: KWPRHWNQQLSWIPCKAQCQIQG*FWHLDN
Trigger: GTTATCCAGATGCCAGAATCAACCTTGTATCTGACA...CTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACACTCATCATCTGTTTCTaGATCTCCTATGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTLIICF*ISYALK
Trigger: TTTCAGTGCATAGGAGATGCAGAAACAGATGATGAG...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTCCACTGGAAGACCACATTTCAGCAAGGACTGGCTCTGAATGACACCTGGATTCTCATCATCTGTTTCTaGATCTCCTATGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: FHWKTTFQQGLALNDTWILIICF*ISYALK
Trigger: TTTCAGTGCATAGGAGATGCAGAAACAGATGATGAG...AATCCAGGTGTCATTCAGAGCCAGTCCTTGCTGAAATGTGGTCTTCCAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTAAAGTGAAGAGTCCTTaGAGGAAGGCCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFKVKSP*RKASRG
Trigger: GCCTCTGCTGGCCTTCCTGCAAGGACTCTTCACTTT...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274498.9
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CAGTGGCAAAGAGAAATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCGTTCTCCAGTTTTGCTaGTTTGATGAAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QWQREMASTLESAVVMDTVLQFC*FDETSL
Trigger: CAAAGAAGTTTCATCAAAGCAGCAAAACTGGAGAAC...GGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp ACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGAGACTGGTTCTCCAGTTTTaGTGCTTTGATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: TGLYLTDDRPTAALEMVRLVLQF*CFDETS
Trigger: AGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAG...TCTCACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GATTTCAAATCAGAGCCAACTCAAGAGGGAGGGACATGCTTCCAAGCAGTGAAGCTGGTTCTCCAGTTTTaGTGCTTTGATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: DFKSEPTQEGGTCFQAVKLVLQF*CFDETS
Trigger: AGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAG...CTTCACTGCTTGGAAGCATGTCCCTCCCTCTTGAGTTGGCTCTGATTTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp GAGCTTGACGGTCCATCGGTTTGTAGTTTGTCTAGAGTCACCCTTGCAATGACAACCGTCATCAAATTCTaGTTGTGGTTGTTAGCAACA +
Preference number: 4 (lower is better)
Translates to: ELDGPSVCSLSRVTLAMTTVIKF*LWLLAT
Trigger: TGTTGCTAACAACCACAAGCAGAATTTGATGACGGT...TGTCATTGCAAGGGTGACTCTAGACAAACTACAAACCGATGGACCGTCAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCACCACACCAAGGTTTaGCACCGTCATCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLHHTKV*HRHQIL
Trigger: CAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTG...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTTCTTCCGAGACAGGTaGAGCTGGGCATTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFFFRDR*SWALVR
Trigger: TCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAA...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp CCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAAGAGGGGGTTATGGAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PFPFFKDHSRCSVKRGLWSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...CCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
CDS-3UTR GCA 90 bp CTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAGTTCTAGTCATGTTCAGCTTTaGAGGCATACAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LDTGISSCHGYHVKLSSSSHVQL*RHTRLL
Trigger: CAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACT...AGAACTGCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR GCA 90 bp GCAGGCCAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCCCAAAGCCCAAGGGATaGTTAAAAACACATAAAGAC +
Preference number: 4 (lower is better)
Translates to: AGQVNLKSPGSTSPSKTVPKPKG*LKTHKD
Trigger: GTCTTTATGTGTTTTTAAGCATCCCTTGGGCTTTGG...GACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTGGCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCTTCATTCTTTCTCTTTaGCTCTCACCGAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSFILSL*LSPKST
Trigger: AGTGCTTTTCGGTGAGAGGCAAAGAGAAAGAATGAA...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTGCTGTCTCCGGGAGTaGCATGTCCACAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFCCLRE*HVHKTQ
Trigger: CTGAGTTTTGTGGACATGGCACTCCCGGAGACAGCA...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR GCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACGCCGATCGGTGTGGCTaGCAAACACATTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDADRCG*QTHLSM
Trigger: CATGCTCAAATGTGTTTGGCAGCCACACCGATCGGC...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCATCAAATTCTGCTTGTaGTTGTTAGCAACATTTGCC +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTIKFCL*LLATFA
Trigger: GGCAAATGTTGCTAACAACCACAAGCAGAATTTGAT...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACCACTGGAGTTCATGTTaGGCTGTAAGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDHWSSC*AVSCCW
Trigger: CCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTG...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGCTCAGCAGTTCTGCTaGGGCCCACGGTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKAQQFC*GPRLEE
Trigger: TTCCTCTAACCGTGGGCCCCAGCAGAACTGCTGAGC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AATGGCCTCGACACTGGAATCAGCAGTTGTCATGGATACCATGTAAAGCTCAGCAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NGLDTGISSCHGYHVKLSNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...GCTGAGCTTTACATGGTATCCATGACAACTGCTGATTCCAGTGTCGAGGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCAGCAAAAATCAGCAGTTGTCATaGATACCATGTAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSPSKTVFHKIQPLFTSKNQQLS*IPCKAQ
Trigger: CTGAGCTTTACATGGTATCCATGACAACTGCTGATT...TTTGCTGGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGAGTGGCAAAGAGAAATaGCCTCGACACTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLSGKEK*PRHWNQ
Trigger: CTGATTCCAGTGTCGAGGCCATTTCTCTTTGCCACT...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp TGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCTTACTAGGCGATGGATaGCAGCCCTTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WILYKQCFNPLHPACKQILLGDG*QPLVAE
Trigger: CTCTGCCACCAAGGGCTGCCATCCATCGCCTAGTAA...GATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGTGGTTACTAGGCGATaGATGGCAGCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKVVTRR*MAALGG
Trigger: GCCACCAAGGGCTGCCATCCATCGCCTAGTAACCAC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ACCCCTGTTAACTTTAAAACCACCTGTAAAGCTATGACGGCACAATCTATACCCGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: TPVNFKTTCKAMTAQSIPGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...GGGTATAGATTGTGCCGTCATAGCTTTACAGGTGGTTTTAAAGTTAACAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CATGAGAAAACGGCTTTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGGGTTTTAGAGTAGGTTaGGTTGCCGTGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: HEKTALQVFLLVIKCSPLGFRVG*VAVVTR
Trigger: CCTAGTAACCACGGCAACCCAACCTACTCTAAAACC...CAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAAAGCCGTTTTCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTGTGAATGGGAGGACATaGGGAAACCAGTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTVNGRT*GNQSDG
Trigger: GCCATCTGACTGGTTTCCCCATGTCCTCCCATTCAC...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp ATAACCAAGAAAGCTGCTTTTAGGTGTCTGGACAACTTTGTAGAAATGGTTGACGCAGAGATGGGTGAATaGGAGGACATGGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: ITKKAAFRCLDNFVEMVDAEMGE*EDMGKP
Trigger: TGGTTTCCCCATGTCCTCCCATTCACCCATCTCTGC...GTCAACCATTTCTACAAAGTTGTCCAGACACCTAAAAGCAGCTTTCTTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGACTGGATTGTATCTCACTGATGACAGGCCAACGGCTGCTTTAGAGATGGTGCTTCCTGAATCACAATaGCCTATATTAGTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: KTGLYLTDDRPTAALEMVLPESQ*PILVSS
Trigger: GCTTGAGACTAATATAGGCCATTGTGATTCAGGAAG...CACCATCTCTAAAGCAGCCGTTGGCCTGTCATCAGTGAGATACAATCCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274498.9
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR CCA 90 bp GGAGTGCCATGTCCACAAAACTCAGTCATCCAGACTTGCTTTTGGGAGCAGAAGAATGACATTCACATGTaGAAGATACGGATAACTCTG +
Preference number: 4 (lower is better)
Translates to: GVPCPQNSVIQTCFWEQKNDIHM*KIRITL
Trigger: CAGAGTTATCCGTATCTTCCACATGTGAATGTCATT...CTTCTGCTCCCAAAAGCAAGTCTGGATGACTGAGTTTTGTGGACATGGCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CAAGTGAATTTGAAATCTCCAGGTAGTACTTCCCCATCCAAGACAGTCTTCCACGAAAAACTCATTGCCTaGAGATGCTCTTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: QVNLKSPGSTSPSKTVFHEKLIA*RCSSHL
Trigger: GAGATGGGAAGAGCATCTCCAGGCAATGAGTTTTTC...GTGGAAGACTGTCTTGGATGGGGAAGTACTACCTGGAGATTTCAAATTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTATGGCTAAGTGATCCCTaGGTCTTACAAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: KQCFNPLHPACKQIQLPVWLSDP*VLQRKL
Trigger: CAGTTTCCTTTGTAAGACCCAGGGATCACTTAGCCA...TACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCCAGTTTTGTAGCTAATAGGAAGGAGGGGAGCCTGGCTGGGCAAAGGGAAACATTCAAAAAGACAGTGTaGTCTGACATAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: SSFVANRKEGSLAGQRETFKKTV*SDIRKH
Trigger: GTGTTTTCTTATGTCAGACCACACTGTCTTTTTGAA...TGTTTCCCTTTGCCCAGCCAGGCTCCCCTCCTTCCTATTAGCTACAAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp TCTTCATCCTGCATGCAAACAGATCCAGCTGCCTGTAGCACTTTAAGTCTCAAGAAAACATTCAGTACTTaGGCAAACTCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSCMQTDPAACSTLSLKKTFST*ANSGCH
Trigger: ATGGCACCCAGAGTTTGCCCAAGTACTGAATGTTTT...CTTGAGACTTAAAGTGCTACAGGCAGCTGGATCTGTTTGCATGCAGGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTCGCTGGCTACCTACTTaGGGAACATGGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTRWLPT*GTWLLT
Trigger: TGTGAGCAACCATGTTCCCCAAGTAGGTAGCCAGCG...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp GGTAGTACTTCCCCATCCAAGACAGTCTTCCACAAGATCCAGCCTCTTTTCACCCTAATTATTACTTGTTaGAGTCTTGTCTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: GSTSPSKTVFHKIQPLFTLIITC*SLVSGM
Trigger: CATGCCTGAGACAAGACTCCAACAAGTAATAATTAG...GGTGAAAAGAGGCTGGATCTTGTGGAAGACTGTCTTGGATGGGGAAGTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR CCA 90 bp AAGGGCTTTAATGCCATTTCCGTTTTTCAAAGATCACTCTCGCTGCTCTGTAAATTGTTAGGTGACAGGTaGCAGGTTGGATTTGACGGG +
Preference number: 4 (lower is better)
Translates to: KGFNAISVFQRSLSLLCKLLGDR*QVGFDG
Trigger: CCCGTCAAATCCAACCTGCCACCTGTCACCTAACAA...TTTACAGAGCAGCGAGAGTGATCTTTGAAAAACGGAAATGGCATTAAAGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421521.5
ENST00000425417.2
3UTR CAA 72 bp CTCGAGTTTTCCCCAGTGGCTTTCTTGAGTTCTGTCTaGGTCCTGTCCATTCTTAATTCTCATTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: LEFSPVAFLSSV*VLSILNSHSLI
Trigger: AATCAGGGAATGAGAATTAAGAATGGACAGGACCAAGACAGAACTCAAGAAAGCCACTGGGGAAAACTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274498.9
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTTCTCTGGGAGCCGATaGACAAGGCTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFFSGSR*TRLWIS
Trigger: TGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAA...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp AGAGATTGGATCTTATATAAACAGTGTTTTAACCCTCTTCATCCTGCATGCAAAGCTACTGTTTCTTCCTaGGGCCTCAGCAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RDWILYKQCFNPLHPACKATVSS*GLSRVG
Trigger: ACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGC...TTTGCATGCAGGATGAAGAGGGTTAAAACACTGTTTATATAAGATCCAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp ACAGAAACATTCATGTTGACAGGTAGCAACAGAGTCAGTCACGCTGCATTTCTCTGTGAACGAAAGTTCTaGGTCATGTTCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TETFMLTGSNRVSHAAFLCERKF*VMFSFA
Trigger: TGCAAAGCTGAACATGACTCAGAACTTTCGTTCACA...GAGAAATGCAGCGTGACTGACTCTGTTGCTACCTGTCAACATGAATGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp CTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTTCTTGCAGTACTAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLVIKCSPLLIDFFSCSTRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...AGTACTGCAAGAAAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TTGCAAGTCTTCCTCTTAGTTATCAAATGCTCTCCTCTGCTGATTGACTTCTTTAGACCGTGCCTGCTGTaGACGAAAGTTCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LQVFLLVIKCSPLLIDFFRPCLL*TKVLSH
Trigger: ATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCT...AAAGAAGTCAATCAGCAGAGGAGAGCATTTGATAACTAAGAGGAAGACTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274498.9
ENST00000418236.5
ENST00000443674.5
ENST00000642734.1
ENST00000645722.2
CDS-3UTR TCA 90 bp TATATTCCGATGCTGCTGAAATTAATCAGAAAGGGAACAGTTCCCAGCTACTATCGTAATTCTCAGGGATaGGGCCAGTCTTTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: YIPMLLKLIRKGTVPSYYRNSQG*GQSFRS
Trigger: TGAACGGAAAGACTGGCCTCATCCCTGAGAATTACG...ATAGTAGCTGGGAACTGTTCCCTTTCTGATTAATTTCAGCAGCATCGGAATATA
43% GC, longest homopolymer 3 nt, total homopo