RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP25 (Homo sapiens)

Ensembl gene IDs: ENSG00000163219

Ensembl transcript IDs: ENST00000409030.7, ENST00000409202.8, ENST00000409220.5, ENST00000456116.6, ENST00000463061.1, ENST00000463483.5, ENST00000467265.5, ENST00000473986.1, ENST00000479844.1, ENST00000481684.5, ENST00000485573.5, ENST00000485700.5, ENST00000488795.1, ENST00000491237.5, ENST00000496266.1, ENST00000497079.5, ENST00000497259.5

Found 919 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGC +
Preference number: 1 (lower is better)
Translates to: QADGRCPLHSGRAPG*TLHISPPGWAPDGG
Trigger: GCCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR GCA 90 bp CTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGCCCAGGCAGACGGAAGATGCCCTCT +
Preference number: 1 (lower is better)
Translates to: LSKEGRSPASKASLS*FTRLSCPGRRKMPS
Trigger: AGAGGGCATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR GCA 90 bp GTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCA +
Preference number: 1 (lower is better)
Translates to: VQPELGPVYCLGPEM*CLKCLHWTWSCLRP
Trigger: TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 90 bp ACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGAACTCTaGACATTTCTCCACCAGGATGGGCACCAGATGGGGGCCGAATTT +
Preference number: 1 (lower is better)
Translates to: TEDALFIPAVLQDEL*TFLHQDGHQMGAEF
Trigger: AAATTCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR GCA 90 bp CAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGAA +
Preference number: 1 (lower is better)
Translates to: QPELGPVYCLGPEMC*LKCLHWTWSCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 90 bp TTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCC +
Preference number: 1 (lower is better)
Translates to: FSLIVSWRSPGEWAS*WGGRMGFSLQQMQP
Trigger: GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 90 bp ACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCG +
Preference number: 1 (lower is better)
Translates to: TCRCSSGDYSCHEEG*RAASSTPAEPLPHP
Trigger: CGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACG +
Preference number: 1 (lower is better)
Translates to: RINHTLVQPELGPVY*LGPEMCCLKCLHWT
Trigger: CGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 90 bp TTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATaGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAG +
Preference number: 1 (lower is better)
Translates to: LFWFSLIVSWRSPGE*ASWWGGRMGFSLQQ
Trigger: CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 90 bp GTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGACCAGAATGGAATAAAACAATCCAT +
Preference number: 1 (lower is better)
Translates to: VYCLGPEMCCLKCLH*TWSCLRPEWNKTIH
Trigger: ATGGATTGTTTTATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR TCA 90 bp CAAAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGATACATGCAGCCTGAACAAACAAATC +
Preference number: 1 (lower is better)
Translates to: QRQTSQLLLGLWRSP*LYILVDTCSLNKQI
Trigger: GATTTGTTTGTTCAGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR CCA 90 bp TGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGAATaGAATAAAACAATCCATTTGAATACAGCGATGGATGGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: CLKCLHWTWSCLRPE*NKTIHLNTAMDGQR
Trigger: TCTCTGACCATCCATCGCTGTATTCAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR TCA 90 bp CTTGAAATTATACAGGAAGCTACTTCAGTGCTATGTGAATACAGCTaGTCTTCCAAAGTGCTAGACCAGAATCTCTCTGTTCACAGACGT +
Preference number: 1 (lower is better)
Translates to: LEIIQEATSVLCEYS*SSKVLDQNLSVHRR
Trigger: ACGTCTGTGAACAGAGAGATTCTGGTCTAGCACTTTGGAAGATCAGCTGTATTCACATAGCACTGAAGTAGCTTCCTGTATAATTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR CCA 90 bp TTTCTCATCAATTTTGCTTGCATAAATACAGTTTGTTGCTTGTTCTaGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCA +
Preference number: 1 (lower is better)
Translates to: FLINFACINTVCCLF*FSLIVSWRSPGEWA
Trigger: TGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAACTGTATTTATGCAAGCAAAATTGATGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
3UTR-3UTR CCA 90 bp TCCTGCCCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 2 (lower is better)
Translates to: SCPGRRKMPSSFRPCSRMRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...CATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TCCGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGACCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SAFVSCPQSRNPSYWLQGPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...TCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR-3UTR GCA 90 bp TCCTGCCCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: SCPGRRKMPSSFRPCSRMSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...CATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp TCCTGCCCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: SCPGRRKMPSSFRPCSRMISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...CATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp GAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 2 (lower is better)
Translates to: ELPTEQEPFVLAPGNHGLFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...GAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR-3UTR GCA 90 bp TTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 2 (lower is better)
Translates to: FVSCPQSRNPSYWLQGTTLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...CGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 2 (lower is better)
Translates to: SWRMGILVGWQNGVLASAHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TGCTCCAGGATGAACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGCCTGAGAGCTGGCCATaGGGACATAGGAGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: CSRMNSAHFSTRMGTRWGPESWP*GHRSPV
Trigger: GACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGG...CCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 2 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 2 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 2 (lower is better)
Translates to: SWRMGILVGWQNGVLASALLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp ATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACTTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 2 (lower is better)
Translates to: IRELPTEQEPFVLAPGNHFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...GTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR-3UTR TCA 90 bp GAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 2 (lower is better)
Translates to: ELPTEQEPFVLAPGNHGLLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...GAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR GCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TCCTGCCCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGCAAAATCGGTTTTCCTaGACCCAAATCCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: SCPGRRKMPSSFRPCSRMQNRFS*TQIHSL
Trigger: GAGAGAGTGGATTTGGGTTCAGGAAAACCGATTTTG...CATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR GCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 2 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 2 (lower is better)
Translates to: SWRMGILVGWQNGVLASAHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp TCTCATGATCACGGCAGGGTCTTCGACCTTCGACCTGATGAGATTCACACCAATGCGCTGGCCAAACACTaGTCCACAGGGTGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: SHDHGRVFDLRPDEIHTNALAKH*STGCAS
Trigger: GCTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGC...ATTGGTGTGAATCTCATCAGGTCGAAGGTCGAAGACCCTGCCGTGATCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR GCA 90 bp ACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGCCGAATTTCTGTTCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 2 (lower is better)
Translates to: TLHISPPGWAPDGGRISVLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...AACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: SWRMGILVGWQNGVLASALKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CCA 90 bp TCTCTGTTCACAGACGTGGTCCCTCCTCTTCTAACTAGGAGCTTCTTTCTGATGGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: SLFTDVVPPLLTRSFFLMGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...CATCAGAAAGAAGCTCCTAGTTAGAAGAGGAGGGACCACGTCTGTGAACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR TCA 90 bp TCTCTGTTCACAGACGTGGTCCCTCCTCTTCTAACTAGGAGCTTCTTTCTGATGCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SLFTDVVPPLLTRSFFLMPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...CATCAGAAAGAAGCTCCTAGTTAGAAGAGGAGGGACCACGTCTGTGAACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR GCA 90 bp CTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGAGCTGCCCACAAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LHQLLLSLCLIRIRELPTREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...TGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR GCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR-3UTR GCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCACAGGGGCCTCTCACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASQGPLT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTGAGAGGCCCCTG...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR GCA 90 bp CGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACAGGAAGCTACTTCAGTaGTATGTGAATACAGCTGAT +
Preference number: 2 (lower is better)
Translates to: RIRELPTEQEPFVLAPGNRKLLQ*YVNTAD
Trigger: ATCAGCTGTATTCACATAGCACTGAAGTAGCTTCCT...GTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR GCA 90 bp CATGTAGGAACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGACAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 2 (lower is better)
Translates to: HVGTCRCSSGDYSCHEEGQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...TCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTTCCTACATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAAAACACAGCACTCCATaGATGAGGACTCAAAAGATG +
Preference number: 2 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRKHSTP*MRTQKM
Trigger: CATCTTTTGAGTCCTCATCCATGGAGTGCTGTGTTT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp TCTCATGATCACGGCAGGGTCTTCGACCTTCGACCTGATGAGATTCACACCAATAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: SHDHGRVFDLRPDEIHTNKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...ATTGGTGTGAATCTCATCAGGTCGAAGGTCGAAGACCCTGCCGTGATCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp GACCTTCGACCTGATGAGATTCACACCAATCACAGTAGCCAGGTTGTCCACACTTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 2 (lower is better)
Translates to: DLRPDEIHTNHSSQVVHTCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...AGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCATCAGGTCGAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 2 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAATAAAACAATCCATTTaGATACAGCGATGGATGGTC +
Preference number: 2 (lower is better)
Translates to: SWRMGILVGWQNGVLASAIKQSI*IQRWMV
Trigger: GACCATCCATCGCTGTATTCAAATGGATTGTTTTAT...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGAATACAGCGATGGATaGTCAGAGATGTCCACACAC +
Preference number: 2 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHEYSDG*SEMSTH
Trigger: GTGTGTGGACATCTCTGACCATCCATCGCTGTATTC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCATGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 2 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGCACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 2 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp ACATCTGTGTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGATCCTGGTAGATACATaGAGCCTGAACAAACAAATC +
Preference number: 2 (lower is better)
Translates to: TSVSVKGGPLPSIKSVSQILVDT*SLNKQI
Trigger: GATTTGTTTGTTCAGGCTGCATGTATCTACCAGGAT...CTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGACACAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 2 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTCACTGGGTGATTaGCACACTTGTCACTCACCC +
Preference number: 2 (lower is better)
Translates to: FPTELLWTVFESLFQSGLQSLGD*HTCHSP
Trigger: GGGTGAGTGACAAGTGTGCCAATCACCCAGTGACTG...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR-3UTR CCA 90 bp TCTCTGTTCACAGACGTGGTCCCTCCTCTTCTAACTAGGAGCTTCTTTCTGATGTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 2 (lower is better)
Translates to: SLFTDVVPPLLTRSFFLMCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...CATCAGAAAGAAGCTCCTAGTTAGAAGAGGAGGGACCACGTCTGTGAACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
3UTR-3UTR CCA 90 bp ATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACAAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 2 (lower is better)
Translates to: IHTNHSSQVVHTHLVNSTRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...TGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 2 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp GATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTCATCCAAGAACAAACAAATCAATaGGTCCCAAAATCGGTTTTC +
Preference number: 2 (lower is better)
Translates to: DGHQMGAEFLFIGHSLIQEQTNQ*VPKSVF
Trigger: GAAAACCGATTTTGGGACTCATTGATTTGTTTGTTC...TTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCACCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 2 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR GCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR GCA 90 bp CACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACAGTTAGGGAAGCCACAGTGTaGACATCTGTGTCTGTCAAA +
Preference number: 2 (lower is better)
Translates to: HTNHSSQVVHTHLVNSTVREATV*TSVSVK
Trigger: TTTGACAGACACAGATGTGCACACTGTGGCTTCCCT...AACTGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CAA 90 bp TGGACGTGGTCATGCCTGAGACCAGAATGGAATAAAACAATCCATTaGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTG +
Preference number: 2 (lower is better)
Translates to: WTWSCLRPEWNKTIH*NTAMDGQRCPHTSL
Trigger: CAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCATGACCACGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CAA 90 bp TCGACCTTCGACCTGATGAGATTCACACCAATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTAACAGCACAGTTCAGCTGTATTTCA +
Preference number: 2 (lower is better)
Translates to: STFDLMRFTPITVAR*STLILLTAQFSCIS
Trigger: TGAAATACAGCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCATCAGGTCGAAGGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 2 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR TCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 2 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CAA 90 bp ATGAGATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTaGTTAACAGCACAGTTCAGCTGTATTTCATGTAGGAACCTGCAG +
Preference number: 2 (lower is better)
Translates to: MRFTPITVARLSTLI*LTAQFSCISCRNLQ
Trigger: CTGCAGGTTCCTACATGAAATACAGCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 2 (lower is better)
Translates to: RINHTLVQPELGPVYCLGCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CAA 90 bp TCAAAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGATACATGCAGCCTGAACAAACAAAT +
Preference number: 2 (lower is better)
Translates to: SKTNFPASSGFVAIS*IVHPGRYMQPEQTN
Trigger: ATTTGTTTGTTCAGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR TCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTGCTCAGTCACTGGGTaGTTGGCACACTTGTCACTC +
Preference number: 2 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSCSVTG*LAHLSL
Trigger: GAGTGACAAGTGTGCCAATCACCCAGTGACTGAGCA...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR-3UTR CCA 90 bp TACTCTGAGAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGCCCACTGAACTTCTCTaGACTGTATTTGAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: YSEKGITFHGLAGNQFSLPTELL*TVFESL
Trigger: GAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGG...CAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTCTCAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR CAA 90 bp ACAATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTaGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACCTCATTGCT +
Preference number: 2 (lower is better)
Translates to: TMLYTFFPLNFSGLY*SLSFRVGFSEDLIA
Trigger: AGCAATGAGGTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR CCA 72 bp TTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGCTCTGGGAGGTCTCGG +
Preference number: 3 (lower is better)
Translates to: FVSCPQSRNPSY*LQGTTGSGRSR
Trigger: CCGAGACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR GCA 72 bp GAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGCCCAGGCAGACGGAAG +
Preference number: 3 (lower is better)
Translates to: EGRSPASKASLS*FTRLSCPGRRK
Trigger: CTTCCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CAA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 72 bp GCCCTCTTCATTCCGGCCGTGCTCCAGGATGAACTCTaGACATTTCTCCACCAGGATGGGCACCAGATGGGG +
Preference number: 3 (lower is better)
Translates to: ALFIPAVLQDEL*TFLHQDGHQMG
Trigger: CCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 72 bp CCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCACATTTCTCCACCAGG +
Preference number: 3 (lower is better)
Translates to: PGRRKMPSSFRP*SRMNSAHFSTR
Trigger: CCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR TCA 72 bp GGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCACCAGGATGGGCACCA +
Preference number: 3 (lower is better)
Translates to: GRCPLHSGRAPG*TLHISPPGWAP
Trigger: TGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR GCA 72 bp TTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGGACGTGGTCATGCCTG +
Preference number: 3 (lower is better)
Translates to: LGPVYCLGPEMC*LKCLHWTWSCL
Trigger: CAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 72 bp GAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCACTGGACGTGGTCATGC +
Preference number: 3 (lower is better)
Translates to: ELGPVYCLGPEM*CLKCLHWTWSC
Trigger: GCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 72 bp CACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTT +
Preference number: 3 (lower is better)
Translates to: HTLVQPELGPVY*LGPEMCCLKCL
Trigger: AAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 72 bp ATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: IVSWRSPGEWAS*WGGRMGFSLQQ
Trigger: CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR-3UTR CAA 90 bp ACATCTGTGTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGTTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: TSVSVKGGPLPSIKSVSQFVAIS*IVHPGR
Trigger: TCTACCAGGATGTACAATCAAGGAGATCGCCACAAA...CTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGACACAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR-3UTR CAA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR GCA 72 bp CAGCGATGGATGGTCAGAGATGTCCACACACATCTCTaGTCACCCTCACCTTCCTGCAAACTCCATTCATTT +
Preference number: 3 (lower is better)
Translates to: QRWMVRDVHTHL*SPSPSCKLHSF
Trigger: AAATGAATGGAGTTTGCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 72 bp TGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: CSSGDYSCHEEG*RAASSTPAEPL
Trigger: CAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
3UTR TCA 72 bp ACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGATACATGCAGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: TSQLLLGLWRSP*LYILVDTCSLN
Trigger: GTTCAGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR CCA 72 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAATGGAATAAAACAATC +
Preference number: 3 (lower is better)
Translates to: PEMCCLKCLHWT*SCLRPEWNKTI
Trigger: GATTGTTTTATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
3UTR CCA 72 bp AATTTTGCTTGCATAAATACAGTTTGTTGCTTGTTCTaGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: NFACINTVCCLF*FSLIVSWRSPG
Trigger: TCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAACTGTATTTATGCAAGCAAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
CDS-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACAGTCGGTGGCCCCGTaGACAGGCAGTCCGGCACCG +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAQSVAP*TGSPAP
Trigger: CGGTGCCGGACTGCCTGTGCACGGGGCCACCGACTG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp GCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: AHRAGTLRTGSREPRALGASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...TCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGAGTTGCCACAGGGGTaGCGCACAGCAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPELPQG*RTAGPQ
Trigger: CTGGGGACCTGCTGTGCGCCACCCCTGTGGCAACTC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGGGAAGAGAGTGCACTaGCTTCCTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPGKRVH*LPPQGT
Trigger: GGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTGCCCAGGCAGACGGAAGATGCCCTCTTCATTCCGGCCGTGCTCCAGGATGCCACAGTGCCCGTCCTaGTGCTTCCTGGAGGACCAC +
Preference number: 4 (lower is better)
Translates to: SCPGRRKMPSSFRPCSRMPQCPS*CFLEDH
Trigger: GTGGTCCTCCAGGAAGCACCAGGACGGGCACTGTGG...CATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp CTCCATCTCCGCCTGAGAGCTGGCCATGAGGACATAGGAGTCCTGTCCCATGCGAACAGACAGGCCGACTaGCCGAGGGACATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LHLRLRAGHEDIGVLSHANRQAD*PRDMGQ
Trigger: CTGCCCCATGTCCCTCGGTCAGTCGGCCTGTCTGTT...CGCATGGGACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGGCGGAGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp GCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGCGGGCCCCGTCATTCTaGAAACCGAAAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAHRAGTLRTGSREPRALRAPSF*KPKGWL
Trigger: CAGCCAACCTTTCGGTTTGCAGAATGACGGGGCCCG...CAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp GCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGACAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: AHRAGTLRTGSREPRALGQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...TCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR GCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCTCTGGGGCTGTCCCTaGAGTACTCCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPLWGCP*STPGTL
Trigger: AAGGGTCCCAGGAGTACTGCAGGGACAGCCCCAGAG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGGGAAGAGAGTGCACTaGCTTCCTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQGKRVH*LPPQGT
Trigger: GGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTCCTGAGAGCTGGCCATaGGGACATAGGAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HRAGTLRTGSREPRALGGPESWP*GHRSPV
Trigger: GACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGG...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp TTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FVSCPQSRNPSYWLQGTTPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...CGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCAGGTCAGTCTGGGATaGAGATCCCAGTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPQVSLG*RSQFPA
Trigger: GGCTGGGAACTGGGATCTTCATCCCAGACTGACCTG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTCCATCTCCGCCTGAGAGCTGGCCATGAGGACATAGGAGTCCTGTCCCATGCGGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LHLRLRAGHEDIGVLSHAGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...CGCATGGGACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGGCGGAGATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: RIRELPTEQEPFVLAPGNRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...GTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGGGAAGAGAGTGCACTaGCTTCCTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASGKRVH*LPPQGT
Trigger: GGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp GTGTCTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTGCCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSLSKEGRSPASKASLSCPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...GCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: RIRELPTEQEPFVLAPGNQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...GTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACTCTGGGGCTGTCCCTaGAGTACTCCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASALWGCP*STPGTL
Trigger: AAGGGTCCCAGGAGTACTGCAGGGACAGCCCCAGAG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GTGTCTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTGCGCGCTGGCCAAACACTaGTGGGGCTTCGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VSLSKEGRSPASKASLSCALAKH*WGFVSS
Trigger: AGAGGACACGAAGCCCCAGCAGTGTTTGGCCAGCGC...GCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp GAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: ELPTEQEPFVLAPGNHGLCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...GAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGTCTCATCCAAGCGCTaGCCAAACACTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPVSSKR*PNTAPQ
Trigger: CTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTCGGCTGCTGTCCGGTaGGGCTGGTTGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQSAAVR*GWLYQS
Trigger: ACTCTGATACAACCAGCCCCACCGGACAGCAGCCGA...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGGTGGGGTGGCAGAATaGGGTTCTCGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQGGVAE*GSRFSR
Trigger: TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASGEWAS*WGGRMG
Trigger: CCCCATTCTGCCACCCCACCAGGATGCCCATTCTCC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCGEWAS*WGGRMG
Trigger: CCCCATTCTGCCACCCCACCAGGATGCCCATTCTCC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGAAGTCCTGGAGAATaGGCATCCTGGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQRSPGE*ASWWGG
Trigger: GCCACCCCACCAGGATGCCCATTCTCCAGGACTTCT...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACGTCTCATCCAAGCGCTaGCCAAACACTGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RIRELPTEQEPFVLAPGNVSSKR*PNTAGA
Trigger: AGCCCCAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...GTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTTGGCTGGAGCCTTCTaGAGAGGAAGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCLAGAF*RGSGHS
Trigger: GCTGTGGCCACTTCCTCTTCAGAAGGCTCCAGCCAA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACCTGAGAGCTGGCCATaGGGACATAGGAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAPESWP*GHRSPV
Trigger: GACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp AGGCCACAGTCTCATCCAAGCGCTGGCCAAACACTGCTCCACAGGGTGTGCCAGGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPQSHPSAGQTLLHRVCQGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...CTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGACTGTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCGCGCTGGCCAAACACTaGTCCACAGGGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCALAKH*STGCAS
Trigger: GCTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGC...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTTCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRAGTLRTGSREPRALGGSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR GCA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HRAGTLRTGSREPRALGGKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGGTGGGGTGGCAGAATaGGGTTCTCGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASGGVAE*GSRFSR
Trigger: TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCATCTGTCACTGGAGGATaGCACCCAAACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASASVTGG*HPNSPS
Trigger: GCTGGGGGAGTTTGGGTGCCATCCTCCAGTGACAGA...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR CCA 90 bp TCCGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGACTGGCCAAACACTGCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SAFVSCPQSRNPSYWLQGLAKHC*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGCAGTGTTTGGCCAG...TCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAAACAGACAGGCCGACTaGCCGAGGGACATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPNRQAD*PRDMGQ
Trigger: CTGCCCCATGTCCCTCGGTCAGTCGGCCTGTCTGTT...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQLLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: ELPTEQEPFVLAPGNHGLTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...GAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp GATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTCATCCAAGCGCTGGCCAAACACTaGTCCACAGGGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DGHQMGAEFLFIGHSLIQALAKH*STGCAS
Trigger: GCTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGC...TTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp AGGCCACAGTCTCATCCAAGCGCTGGCCAAACACTGCTCCACAGGGTGTGCCAGAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RPQSHPSAGQTLLHRVCQKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...CTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGACTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQFPWVL*CCPPET
Trigger: CGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAA...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCTCTGGGGCTGTCCCTaGAGTACTCCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLWGCP*STPGTL
Trigger: AAGGGTCCCAGGAGTACTGCAGGGACAGCCCCAGAG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGCTCCAGGATGAACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: CSRMNSAHFSTRMGTRWGVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...CCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp ACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGCCGAATTTCTGTTGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: TLHISPPGWAPDGGRISVASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...AACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGCGATTCTGGTCCCATaGGGCTGGAATGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPAILVP*GWNDFK
Trigger: TTTGAAATCATTCCAGCCTCATGGGACCAGAATCGC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCACCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCATTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCGGTTAGGGAGTGTTTaGGTCCTTTTACGAGATTGC +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPRLGSV*VLLRDC
Trigger: GCAATCTCGTAAAAGGACTCAAACACTCCCTAACCG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAAGTTGGCGCAAGTCTTaGGACATCGTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRSWRKS*DIVLLC
Trigger: GCACAGGAGAACGATGTCTCAAGACTTGCGCCAACT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAAGTTGGCGCAAGTCTTaGGACATCGTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASASWRKS*DIVLLC
Trigger: GCACAGGAGAACGATGTCTCAAGACTTGCGCCAACT...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCCTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCLLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACCTCTCTCTGAGCCCTTaGCTGAGTGTCACTACCATC +
Preference number: 4 (lower is better)
Translates to: IRELPTEQEPFVLAPGNHLSLSP*LSVTTI
Trigger: GATGGTAGTGACACTCAGTCAAGGGCTCAGAGAGAG...GTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCCGGGCCCCGTCATTCTaGAAACCGAAAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVRAPSF*KPKGWL
Trigger: CAGCCAACCTTTCGGTTTGCAGAATGACGGGGCCCG...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCGGGCCCCGTCATTCTaGAAACCGAAAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCRAPSF*KPKGWL
Trigger: CAGCCAACCTTTCGGTTTGCAGAATGACGGGGCCCG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR GCA 90 bp CCACCAGGATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTTGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: PPGWAPDGGRISVHRPQSWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...AGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPSTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: HRAGTLRTGSREPRALGGSTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAATCCTGGTAGATACATaGAGCCCTGGGGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRILVDT*SPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGAT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SAFVSCPQSRNPSYWLQGREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...TCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCACCAGGATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTACTGACCGAGGGACATaGGGCAGTGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PPGWAPDGGRISVHRPQSTDRGT*GSEQRV
Trigger: CACTCTTTGCTCACTGCCCCATGTCCCTCGGTCAGT...AGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp GATGGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DGELLHQLLLSLCLIRIRGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...ACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp GGCCTCTCACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPADVAQETIVVTRKDPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...ATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTGAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp ACTGCTCCACAGGGTGTGCCAGCAACTCTCCTGAGGAATTTAACCCACTCCTCCATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: TAPQGVPATLLRNLTHSSISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...GGAGGAGTGGGTTAAATTCCTCAGGAGAGTTGCTGGCACACCCTGTGGAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp CTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGAGCTGCCCACAATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LHQLLLSLCLIRIRELPTISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...TGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp ACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGCCGAATTTCTGTTAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: TLHISPPGWAPDGGRISVRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...AACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPLKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGGCATCCTGGTGGGGTaGCAGAATGGGGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPGILVG*QNGVLA
Trigger: AGCGAGAACCCCATTCTGCCACCCCACCAGGATGCC...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCGGCATCCTGGTGGGGTaGCAGAATGGGGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFGILVG*QNGVLA
Trigger: AGCGAGAACCCCATTCTGCCACCCCACCAGGATGCC...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFGEWAS*WGGRMG
Trigger: CCCCATTCTGCCACCCCACCAGGATGCCCATTCTCC...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCAGAAGTCCTGGAGAATaGGCATCCTGGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVRSPGE*ASWWGG
Trigger: GCCACCCCACCAGGATGCCCATTCTCCAGGACTTCT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATAGAAGTCCTGGAGAATaGGCATCCTGGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNRSPGE*ASWWGG
Trigger: GCCACCCCACCAGGATGCCCATTCTCCAGGACTTCT...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCTTCCCTCTGCGTCATaGGAAGCAAAGCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQLPSAS*EAKLLF
Trigger: GAAAAGGAGCTTTGCTTCCCATGACGCAGAGGGAAG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATAGGGACATGGGGCAGTaGGCAAAGAGTGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHRDMGQ*AKSGRR
Trigger: TCTCCGCCCACTCTTTGCTCACTGCCCCATGTCCCT...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp AGTGAGGACCTCATTGCTCAGTCACTGGGTGATTGGCACACTTGTCACTCACCCCCTGAGAGCTGGCCATaGGGACATAGGAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SEDLIAQSLGDWHTCHSPPESWP*GHRSPV
Trigger: GACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGG...GGGTGAGTGACAAGTGTGCCAATCACCCAGTGACTGAGCAATGAGGTCCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTTGCTTCCAGTTTAAGTaGGTAGTTAGTGAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SCPQSRNPSYWLQGTTGSCFQFK*VVSEAV
Trigger: CACCGCTTCACTAACTACTCACTTAAACTGGAAGCA...AGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp GTGTCTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTGCCCTCCACTTTCAGGTTaGAATCCCAGTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VSLSKEGRSPASKASLSCPPLSG*NPSSLA
Trigger: TGCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGG...GCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCCCTGGGTACTTTGCTaGTGTCCTCCGGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCPWVLC*CPPETH
Trigger: ATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGACTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASALGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTTGACACTTCCCTCTaGGTCATGGGAAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAVDTSL*VMGSKA
Trigger: AGCTTTGCTTCCCATGACGCAGAGGGAAGTGTCAAC...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR GCA 90 bp ACATCTGTGTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGGGAGGACCACTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: TSVSVKGGPLPSIKSVSQGGPLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGTGGTCCTCC...CTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGACACAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp ACTGCTCCACAGGGTGTGCCAGCAACTCTCCTGAGGAATTTAACCCACTCCTCCCCTGGAGGACCACTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: TAPQGVPATLLRNLTHSSPGGPL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGTGGTCCTCCAGG...GGAGGAGTGGGTTAAATTCCTCAGGAGAGTTGCTGGCACACCCTGTGGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCCAGGCTGCAGTCGGTaGCCCCGTGCACAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGPGCSR*PRAQAV
Trigger: GACTGCCTGTGCACGGGGCCACCGACTGCAGCCTGG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp AACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACCCAGGCTGCAGTCGGTaGCCCCGTGCACAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: NFSGLYLSLSFRVGFSEDPGCSR*PRAQAV
Trigger: GACTGCCTGTGCACGGGGCCACCGACTGCAGCCTGG...GTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp GATGGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: DGELLHQLLLSLCLIRIRVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...ACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp CTCCATCTCCGCCTGAGAGCTGGCCATGAGGACATAGGAGTCCTGTCCCATGCGTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: LHLRLRAGHEDIGVLSHACHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...CGCATGGGACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGGCGGAGATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQTGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCATCGGCTGCTGTCCGGTaGGGCTGGTTGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPSAAVR*GWLYQS
Trigger: ACTCTGATACAACCAGCCCCACCGGACAGCAGCCGA...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGACAAGAGTATCTCCCTTaGAGTCACAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRQEYLP*SHRLGK
Trigger: CTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTG...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCATGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASCLHWT*SCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACA...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCATGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASACLHWT*SCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACA...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGGTGGGGTGGCAGAATaGGGTTCTCGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPGGVAE*GSRFSR
Trigger: TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACC...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAAAGTTGGAGAAGTCCTaGAGAATGGGCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAKLEKS*RMGILV
Trigger: CACCAGGATGCCCATTCTCCAGGACTTCTCCAACTT...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGTCTCATCCAAGCGCTaGCCAAACACTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVVSSKR*PNTAEE
Trigger: CTCCTCAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAAGTGGCCACAGCATCTaGCAAAAGGTGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASASGHSI*QKVLPF
Trigger: AAAAGGAAGCACCTTTTGTCAGATGCTGTGGCCACT...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp GCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATCAACTCAGGGACATGGGGCAGTaGGCAAAGAGTGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AQETIVVTRKDGELLHQLRDMGQ*AKSGRR
Trigger: TCTCCGCCCACTCTTTGCTCACTGCCCCATGTCCCT...GAGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAAGTCATCACACTCCTTaGCCGAGCTATAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRSHHTP*PSYREE
Trigger: TTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCATTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACGGTTAGGGAGTGTTTaGGTCCTTTTACGAGATTGC +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASRLGSV*VLLRDC
Trigger: GCAATCTCGTAAAAGGACTCAAACACTCCCTAACCG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCCGGTTAGGGAGTGTTTaGGTCCTTTTACGAGATTGC +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCRLGSV*VLLRDC
Trigger: GCAATCTCGTAAAAGGACTCAAACACTCCCTAACCG...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATCCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATCCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCACACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGCGTCTCTCAGCTGCTTCACCAGGTTGTCCTGCCCAGGCAGACGGAAGATGCCCAAAATCGGTTTTCCTaGACCCAAATCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVSQLLHQVVLPRQTEDAQNRFS*TQIHSL
Trigger: GAGAGAGTGGATTTGGGTTCAGGAAAACCGATTTTG...GGCATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCTGAGAGACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp AGTGAGGACCTCATTGCTCAGTCACTGGGTGATTGGCACACTTGTCACTCACCCTGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: SEDLIAQSLGDWHTCHSPWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...GGGTGAGTGACAAGTGTGCCAATCACCCAGTGACTGAGCAATGAGGTCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASASTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp GATGGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTTTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: DGELLHQLLLSLCLIRIRFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...ACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp GGCCTCTCACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GLSPADVAQETIVVTRKDSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...ATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNFPWVL*CCPPET
Trigger: CGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAA...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGATCTCCATTTTGCTaGTGTTGGCACCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQRSPFC*CWHPEK
Trigger: CTTTTCAGGGTGCCAACAGCAGCAAAATGGAGATCT...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACAGGGGCTAGCACCCTaGTTTTCTTGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASQGLAP*FSCFQF
Trigger: AAACTGAAAGCAAGAAAAGCAGGGTGCTAGCCCCTG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR GCA 90 bp GGCCTCTCACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATCAGGGGCCTCTCACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GLSPADVAQETIVVTRKDQGPLT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTGAGAGGCCCCTG...ATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp GCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAAGGAAGCTACTTCAGTaGTATGTGAATACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AHRAGTLRTGSREPRALGRKLLQ*YVNTAD
Trigger: ATCAGCTGTATTCACATAGCACTGAAGTAGCTTCCT...TCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CCA 90 bp AAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTGATTGTACATCCAGGCTGCAGTCGGTaGCCCCGTGCACAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KTNFPASSGFVAISLIVHPGCSR*PRAQAV
Trigger: GACTGCCTGTGCACGGGGCCACCGACTGCAGCCTGG...ATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATAGATACATGCAGCCCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNRYMQP*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGGGCTGCATGTATCT...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp CATCTGTGTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCCTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: HLCLSKEGRSPASKASLSLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...GCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGACACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGTCTCATCCAAGCGCTaGCCAAACACTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPVSSKR*PNTAPQ
Trigger: CTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp AGTGAGGACCTCATTGCTCAGTCACTGGGTGATTGGCACACTTGTCACTCACCCGTCTCATCCAAGCGCTaGCCAAACACTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SEDLIAQSLGDWHTCHSPVSSKR*PNTAPQ
Trigger: CTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...GGGTGAGTGACAAGTGTGCCAATCACCCAGTGACTGAGCAATGAGGTCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCAGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp AGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RNHVSWVSRKPVFSGRSPGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...GGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAATACAGCGATGGATaGTCAGAGATGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: SWRMGILVGWQNGVLASAEYSDG*SEMSTH
Trigger: GTGTGTGGACATCTCTGACCATCCATCGCTGTATTC...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCLKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCAAACACAGCACTCCATaGATGAGGACTCAAAAGATG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPKHSTP*MRTQKM
Trigger: CATCTTTTGAGTCCTCATCCATGGAGTGCTGTGTTT...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAACAGACAGGCCGACTaGCCGAGGGACATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGNRQAD*PRDMGQ
Trigger: CTGCCCCATGTCCCTCGGTCAGTCGGCCTGTCTGTT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp CCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTAACAGACAGGCCGACTaGCCGAGGGACATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLNFSGLYLSLSFRVGFSNRQAD*PRDMGQ
Trigger: CTGCCCCATGTCCCTCGGTCAGTCGGCCTGTCTGTT...ACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCCTCCACTTTCAGGTTaGAATCCCAGTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNPPLSG*NPSSLA
Trigger: TGCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR TCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATAGTCATCACACTCCTTaGCCGAGCTATTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNSHHTP*PSYFRS
Trigger: GCTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACT...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR TCA 90 bp CTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGAGCTGCCCACAAGTCATCACACTCCTTaGCCGAGCTATTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LHQLLLSLCLIRIRELPTSHHTP*PSYFRS
Trigger: GCTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACT...TGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp CGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCTATGTGAATACAGCTaGTCTTCCAAAGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: RIRELPTEQEPFVLAPGNLCEYS*SSKVLD
Trigger: GTCTAGCACTTTGGAAGATCAGCTGTATTCACATAG...GTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTCAGTCGGTGGCCCCGTaGACAGGCAGTCCGGCACCG +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTQSVAP*TGSPAP
Trigger: CGGTGCCGGACTGCCTGTGCACGGGGCCACCGACTG...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR GCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATTGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTTGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp GGCCTCTCACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: GLSPADVAQETIVVTRKDLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...ATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNGPEMC*LKCLHW
Trigger: CCAGTGAAGACATTTGAGGCAGCACATCTCAGGACC...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPLNFSGLYLSLSFRVGFPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...GAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCCTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp GTGTGCACATCTGTGTCTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: VCTSVSLSKEGRSPASKACHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...CGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACACAGATGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCACTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCAAGAGTATCTCCCTTaGAGTCACAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCQEYLP*SHRLGK
Trigger: CTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCGGTGGGGTGGCAGAATaGGGTTCTCGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLGGVAE*GSRFSR
Trigger: TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACC...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCAAGTTGGAGAAGTCCTaGAGAATGGGCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCKLEKS*RMGILV
Trigger: CACCAGGATGCCCATTCTCCAGGACTTCTCCAACTT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGTCTCATCCAAGCGCTaGCCAAACACTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHVSSKR*PNTPQG
Trigger: ACCCTGTGGAGTGTTTGGCCAGCGCTTGGATGAGAC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409030.7
CDS-3UTR TCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCGCGATTCTGGTCCCATaGGGCTGGAATGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCAILVP*GWNDFK
Trigger: TTTGAAATCATTCCAGCCTCATGGGACCAGAATCGC...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCTGCTGTTGGCACCCTaGAAAGCTGATGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLLLAP*KADVKK
Trigger: TTTCTTGACATCAGCTTTTCAGGGTGCCAACAGCAG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCTGCTGTTGGCACCCTaGAAAGCTGATGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNLLLAP*KADVKK
Trigger: TTTCTTGACATCAGCTTTTCAGGGTGCCAACAGCAG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATCTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHLLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp GAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCAGCGCTGGCCAAACACTaGTCCACAGGGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERNHVSWVSRKPVFSGRSALAKH*STGCAS
Trigger: GCTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGC...TGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: CRCSSGDYSCHEEGWRAAFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...AGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR GCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAAACCGAAAGGTTGGCTaGAGCCTTCTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPNRKVG*SLLKRK
Trigger: CTTCCTCTTCAGAAGGCTCCAGCCAACCTTTCGGTT...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTGCAAACCGAAAGGTTaGCTGGAGCCTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFCKPKG*LEPSEE
Trigger: CTCTTCAGAAGGCTCCAGCCAACCTTTCGGTTTGCA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp CCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLNFSGLYLSLSFRVGFSGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...ACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp AGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RNHVSWVSRKPVFSGRSPVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...GGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp AAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTGATTGTACATCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTNFPASSGFVAISLIVHPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...ATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp ATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACAGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: IHTNHSSQVVHTHLVNSTGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...TGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVTGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCTGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGAATACAGCGATGGATaGTCAGAGATGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVEYSDG*SEMSTH
Trigger: GTGTGTGGACATCTCTGACCATCCATCGCTGTATTC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGAATACAGCGATGGATaGTCAGAGATGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNEYSDG*SEMSTH
Trigger: GTGTGTGGACATCTCTGACCATCCATCGCTGTATTC...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCTGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCATGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPCLHWT*SCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACA...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGTCTAATAGTAAGTTaGAGAAGTCCTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQSLIVS*RSPGEW
Trigger: CCATTCTCCAGGACTTCTCCAACTTACTATTAGACT...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTCATCCAAAGTCATCACACTCCTTaGCCGAGCTATAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DGHQMGAEFLFIGHSLIQSHHTP*PSYREE
Trigger: TTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACT...TTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp TCTCTGTTCACAGACGTGGTCCCTCCTCTTCTAACTAGGAGCTTCTTTCTGATGGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLFTDVVPPLLTRSFFLMGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...CATCAGAAAGAAGCTCCTAGTTAGAAGAGGAGGGACCACGTCTGTGAACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: CRCSSGDYSCHEEGWRAAFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...AGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PLNFSGLYLSLSFRVGFSEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...ACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTAGTTGGCGCAAGTCTTaGGACATCGTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGSWRKS*DIVLLC
Trigger: GCACAGGAGAACGATGTCTCAAGACTTGCGCCAACT...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCCTCCTTTCTCTTAGATaGAAGGTCCATCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVLLSLR*KVHPSV
Trigger: GACAGATGGATGGACCTTTCATCTAAGAGAAAGGAG...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGTCCCCAGAAAGGGCTaGAGGAAAATAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGVPRKG*RKITRV
Trigger: CACCCTGGTTATTTTCCTTCAGCCCTTTCTGGGGAC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR TCA 90 bp TCCGCATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAGGTTTTCAGAATCCTTaGAATTATACAGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: SAFVSCPQSRNPSYWLQGGFQNP*NYTGSY
Trigger: GTAGCTTCCTGTATAATTTCAAGGATTCTGAAAACC...TCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp TCTCTGTTCACAGACGTGGTCCCTCCTCTTCTAACTAGGAGCTTCTTTCTGATGTGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: SLFTDVVPPLLTRSFFLMWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...CATCAGAAAGAAGCTCCTAGTTAGAAGAGGAGGGACCACGTCTGTGAACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: FPLNFSGLYLSLSFRVGFQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...GAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTTCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: PLNFSGLYLSLSFRVGFSSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...ACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: RNHVSWVSRKPVFSGRSPLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...GGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRNASLG*CPVGLV
Trigger: AACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCAGATCTCCATTTTGCTaGTGTTGGCACCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCRSPFC*CWHPEK
Trigger: CTTTTCAGGGTGCCAACAGCAGCAAAATGGAGATCT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCTCTTGGACCATCCTCTaGAAAGAATCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCSWTIL*KESISS
Trigger: AGAGGAAATTGATTCTTTGCAGAGGATGGTCCAAGA...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHGPEMC*LKCLHW
Trigger: CCAGTGAAGACATTTGAGGCAGCACATCTCAGGACC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAACCAGGCTGCAGTCGGTaGCCCCGTGCACAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEPGCSR*PRAQAV
Trigger: GACTGCCTGTGCACGGGGCCACCGACTGCAGCCTGG...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTAGATACATGCAGCCCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGRYMQP*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGGGCTGCATGTATCT...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCAGTCTCATCCAAGCGCTaGCCAAACACTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASVSSKR*PNTAPQ
Trigger: CTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGAC...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp GCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATCAACTCAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AQETIVVTRKDGELLHQLRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...GAGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp TGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CRCSSGDYSCHEEGWRAARMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...AGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLRNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGCATCCTGGTGGGGTaGCAGAATGGGGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGILVG*QNGVLA
Trigger: AGCGAGAACCCCATTCTGCCACCCCACCAGGATGCC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGEWAS*WGGRMG
Trigger: CCCCATTCTGCCACCCCACCAGGATGCCCATTCTCC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTAAGTTGGAGAAGTCCTaGAGAATGGGCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLKLEKS*RMGILV
Trigger: CACCAGGATGCCCATTCTCCAGGACTTCTCCAACTT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACACGTCCTGGTGCTTCCTaGAGGACCACTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IHTNHSSQVVHTHLVNSTRPGAS*RTTLLP
Trigger: TGGCAGCAGAGTGGTCCTCCAGGAAGCACCAGGACG...TGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR CAA 72 bp GTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACCTCATaGCTCAGTCACTGGGTGATTGGCACACTTGTCACT +
Preference number: 4 (lower is better)
Translates to: VSLSEWASVRTS*LSHWVIGTLVT
Trigger: AGTGACAAGTGTGCCAATCACCCAGTGACTGAGCAATGAGGTCCTCACTGAAGCCCACTCTGAAAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCGTGGGAGTCAGTATCTaGCAAGAGAGAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFVGVSI*QERGEN
Trigger: ATTTTCTCCTCTCTCTTGTCAGATACTGACTCCCAC...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATAGGGACATGGGGCAGTaGGCAAAGAGTGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNRDMGQ*AKSGRR
Trigger: TCTCCGCCCACTCTTTGCTCACTGCCCCATGTCCCT...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCTGAGAGCTGGCCATaGGGACATAGGAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGPESWP*GHRSPV
Trigger: GACAGGACTCCTATGTCCTCATGGCCAGCTCTCAGG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR TCA 90 bp AGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCTTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: RNHVSWVSRKPVFSGRSPFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...GGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CATAGGCCACAGTCTCATCCAAGCGCTGGCCAAACACTGCTCCACAGGGTGTGCGAACAAACAAATCAATaGGTCCCAAAATCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: HRPQSHPSAGQTLLHRVCEQTNQ*VPKSVF
Trigger: GAAAACCGATTTTGGGACTCATTGATTTGTTTGTTC...GCACACCCTGTGGAGCAGTGTTTGGCCAGCGCTTGGATGAGACTGTGGCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGACAAGGTGTGTTCAGATaGGTCTGTAGCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRQGVFR*VCSSSA
Trigger: GGCGCTGCTGCTACAGACTCATCTGAACACACCTTG...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGCGCTGGCCAAACACTaGTCCACAGGGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTALAKH*STGCAS
Trigger: GCTGGCACACCCTGTGGAGCAGTGTTTGGCCAGCGC...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp CATGTAGGAACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: HVGTCRCSSGDYSCHEEGSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...TCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTTCCTACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGATTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp ATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACATCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: IHTNHSSQVVHTHLVNSTSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...TGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCCCTGGGTACTTTGCTaGTGTCCTCCGGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGPWVLC*CPPETH
Trigger: ATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GATGGAGAGCTGCTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGAGTCTGTCACAGTTTaGGCCCTTCTTGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DGELLHQLLLSLCLIRIRESVTV*ALLVFS
Trigger: TGAAAAGACAAGAAGGGCGCAAACTGTGACAGACTC...ACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp TGCTCCAGGATGAACTCTGCACATTTCTCCACCAGGATGGGCACCAGATGGGGGATCCTGGTAGATACATaGAGCCTGAACAAACAAATC +
Preference number: 4 (lower is better)
Translates to: CSRMNSAHFSTRMGTRWGILVDT*SLNKQI
Trigger: GATTTGTTTGTTCAGGCTGCATGTATCTACCAGGAT...CCCCCATCTGGTGCCCATCCTGGTGGAGAAATGTGCAGAGTTCATCCTGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRGVDDG*KAAICS
Trigger: CGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCCTCTCCAGCGGGTTaGGGGTGGACGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKASPAG*GWTMDG
Trigger: TCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAACCACGGGCTCTaGGAGGTCTCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKGNHGL*EVSEVE
Trigger: CTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTCGGCTGCTGTCCGGTaGGGCTGGTTGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGSAAVR*GWLYQS
Trigger: ACTCTGATACAACCAGCCCCACCGGACAGCAGCCGA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAAGAGAGTGCACTaGCTTCCTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGKRVH*LPPQGT
Trigger: GGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCAAGAGTATCTCCCTTaGAGTCACAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLQEYLP*SHRLGK
Trigger: CTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATGGCATCCTGGTGGGGTaGCAGAATGGGGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDGILVG*QNGVLA
Trigger: AGCGAGAACCCCATTCTGCCACCCCACCAGGATGCC...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCAAATTCAGGTCAGTCTaGGATGAAGATCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFKFRSV*DEDPSS
Trigger: GGAACTGGGATCTTCATCCCAGACTGACCTGAATTT...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAAGGGACATGGGGCAGTaGGCAAAGAGTGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKRDMGQ*AKSGRR
Trigger: TCTCCGCCCACTCTTTGCTCACTGCCCCATGTCCCT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp TCTCATGATCACGGCAGGGTCTTCGACCTTCGACCTGATGAGATTCACACCAATGCGATTCTGGTCCCATaGGGCTGGAATGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: SHDHGRVFDLRPDEIHTNAILVP*GWNDFK
Trigger: TTTGAAATCATTCCAGCCTCATGGGACCAGAATCGC...ATTGGTGTGAATCTCATCAGGTCGAAGGTCGAAGACCCTGCCGTGATCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCATTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: ERNHVSWVSRKPVFSGRSFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...TGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATCCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAGTTGGCGCAAGTCTTaGGACATCGTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGSWRKS*DIVLLC
Trigger: GCACAGGAGAACGATGTCTCAAGACTTGCGCCAACT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGATCCTGGTAGATACATaGAGCCCTGGGGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGILVDT*SPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGAT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp AACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACATCCTGGTAGATACATaGAGCCCTGGGGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: NFSGLYLSLSFRVGFSEDILVDT*SPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGAT...GTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGATCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp AACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NFSGLYLSLSFRVGFSEDKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...GTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTGATTGTACATCTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: KTNFPASSGFVAISLIVHLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...ATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTTTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFPWVL*CCPPET
Trigger: CGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATTCTTGGACCATCCTCTaGAAAGAATCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNSWTIL*KESISS
Trigger: AGAGGAAATTGATTCTTTGCAGAGGATGGTCCAAGA...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTCTCTGGGGCTGTCCCTaGAGTACTCCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTLWGCP*STPGTL
Trigger: AAGGGTCCCAGGAGTACTGCAGGGACAGCCCCAGAG...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACTCTGGGGCTGTCCCTaGAGTACTCCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKLWGCP*STPGTL
Trigger: AAGGGTCCCAGGAGTACTGCAGGGACAGCCCCAGAG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCATGTAGGAACTGTTTaGTATATCTTCCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNHVGTV*YIFLVS
Trigger: GGAAACCAGGAAGATATAGCAAACAGTTCCTACATG...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAACCAGCGGGTTGGGGGTaGACGATGGATGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEPAGWG*TMDGRQ
Trigger: CTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGG...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp TTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGATACATGCAGCCCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPLNFSGLYLSLSFRVGFRYMQP*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGGGCTGCATGTATCT...GAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATGCTGTCCGGTGGGGCTaGTTGTATCAGAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDAVRWG*LYQSRL
Trigger: CAAGCGACTCTGATACAACCAGCCCCACCGGACAGC...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATTCGGCTGCTGTCCGGTaGGGCTGGTTGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDSAAVR*GWLYQS
Trigger: ACTCTGATACAACCAGCCCCACCGGACAGCAGCCGA...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGGGAAGAGAGTGCACTaGCTTCCTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEGKRVH*LPPQGT
Trigger: GGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATTTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGAATACAGCGATGGATaGTCAGAGATGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGEYSDG*SEMSTH
Trigger: GTGTGTGGACATCTCTGACCATCCATCGCTGTATTC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGLKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGAGAATGGGCATCCTaGTGGGGTGGCAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKGEWAS*WGGRMG
Trigger: CCCCATTCTGCCACCCCACCAGGATGCCCATTCTCC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR TCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATTTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACCCTGCCTTAGCCTCTaGGGAAGGCGACCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKPCLSL*GRRPEF
Trigger: GAATTCTGGTCGCCTTCCTCAGAGGCTAAGGCAGGG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGTTGGCGCAAGTCTTaGGACATCGTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGSWRKS*DIVLLC
Trigger: GCACAGGAGAACGATGTCTCAAGACTTGCGCCAACT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACCATGTTGCGGAGGCTaGTCTCTAGGGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKPCCGG*SLGLQT
Trigger: AGTCTGCAGCCCTAGAGATCAGCCTCCGCAACATGG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCATAAAACAATCCATTTaGATACAGCGATGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVIKQSI*IQRWMV
Trigger: GACCATCCATCGCTGTATTCAAATGGATTGTTTTAT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACACCTTAGTCCAGCCTaGGTTGGGGCCAGTCTATTG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRHLSPA*VGASLL
Trigger: CAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTGCCCTGAGGCTGTCTaGCAAGGTGAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKCPEAV*QGELFH
Trigger: GTGGAACAGCTCACCTTGTCAGACAGCCTCAGGGCA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTTGCTCAGTCACTGGGTaGTTGGCACACTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLCSVTG*LAHLSL
Trigger: GAGTGACAAGTGTGCCAATCACCCAGTGACTGAGCA...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTCAGGCAGACGGAAGATaGCCTCTTCATTCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTQADGR*PLHSGR
Trigger: ACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTG...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FPLNFSGLYLSLSFRVGFREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...GAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATCCGCATTCGTGAGCTaGCCACAGAGCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKSAFVS*PQSRNP
Trigger: AGGGTTCCTGCTCTGTGGGCAGCTCACGAATGCGGA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACTCCTGCTGAGCCTTTaGCTCATCCGCATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRLLLSL*LIRIRE
Trigger: CTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACCCTGGGTACTTTGCTaGTGTCCTCCGGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRPWVLC*CPPETH
Trigger: ATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWFPWVL*CCPPET
Trigger: CGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAA...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCAGATCTCCATTTTGCTaGTGTTGGCACCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLRSPFC*CWHPEK
Trigger: CTTTTCAGGGTGCCAACAGCAGCAAAATGGAGATCT...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTCTTGGACCATCCTCTaGAAAGAATCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFSWTIL*KESISS
Trigger: AGAGGAAATTGATTCTTTGCAGAGGATGGTCCAAGA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTGGGTCCTGAGATGTaGTGCCTCAAATGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLGPEM*CLKCLH
Trigger: GTGAAGACATTTGAGGCAGCACATCTCAGGACCCAG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATTGGGGCCAGTCTATTaGCTGGGTCCTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRLGPVY*LGPEMC
Trigger: GCACATCTCAGGACCCAGGCAATAGACTGGCCCCAA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCAAGGGAAGCCACAGTGTaGACATCTGTGTCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASREATV*TSVSVK
Trigger: TTTGACAGACACAGATGTGCACACTGTGGCTTCCCT...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGTTGGGGGTGGACGATaGATGGAAGGCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKVGGGR*MEGSHL
Trigger: CAGATGGCTGCCTTCCATCCATCGTCCACCCCCAAC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CCA 90 bp GAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCAAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ERNHVSWVSRKPVFSGRSRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...TGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAAGGAACCCTTCGTACTaGCTCCAGGGAACCACGGGC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGERNPSY*LQGTTG
Trigger: GCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGGGACGTTATCGTAGGTaGAAGTCCGTTGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWGRYRR*KSVGSQ
Trigger: CTGACTCCCAACGGACTTCCACCTACGATAACGTCC...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCTCCTTTCGTAGCTCTTaGACCATCCTCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLSFRSS*TILCKE
Trigger: TTCTTTGCAGAGGATGGTCCAAGAGCTACGAAAGGA...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGGCCAGTCTATTGCCTaGGTCCTGAGATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTGQSIA*VLRCAA
Trigger: GGCAGCACATCTCAGGACCCAGGCAATAGACTGGCC...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTAAACACAGCACTCCATaGATGAGGACTCAAAAGATG +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLKHSTP*MRTQKM
Trigger: CATCTTTTGAGTCCTCATCCATGGAGTGCTGTGTTT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTAGAAGTCCTGGAGAATaGGCATCCTGGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTRSPGE*ASWWGG
Trigger: GCCACCCCACCAGGATGCCCATTCTCCAGGACTTCT...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATCTGTCACTGGAGGATaGCACCCAAACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKSVTGG*HPNSPS
Trigger: GCTGGGGGAGTTTGGGTGCCATCCTCCAGTGACAGA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR TCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAGCGATTCTGGTCCCATaGGGCTGGAATGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRAILVP*GWNDFK
Trigger: TTTGAAATCATTCCAGCCTCATGGGACCAGAATCGC...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCGTGCTCCAGGATaGACTCTGCACATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGRAPG*TLHISP
Trigger: TGGAGAAATGTGCAGAGTTCATCCTGGAGCACGGCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR TCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTCCTCATCCGCATTCGTaGGCTGCCCACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSPHPHS*AAHRAG
Trigger: TCCTGCTCTGTGGGCAGCTCACGAATGCGGATGAGG...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGAGGAGTCCCTCTCATaGTCACGGCAGGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEEESLS*SRQGLR
Trigger: TCGAAGACCCTGCCGTGATCATGAGAGGGACTCCTC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTTTTCTGGGCAGGGGGTaGCAGGGGTATATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTFLGRG*QGYILG
Trigger: TCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAA...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCGGTTAGGGAGTGTTTaGGTCCTTTTACGAGATTGC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGRLGSV*VLLRDC
Trigger: GCAATCTCGTAAAAGGACTCAAACACTCCCTAACCG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATCTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDLLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGTCATCACACTCCTTaGCCGAGCTATTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGSHHTP*PSYFRS
Trigger: GCTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR TCA 90 bp GGCCTCTCACCTGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATTACTTCAGTGCTATGTaGATACAGCTGATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GLSPADVAQETIVVTRKDYFSAM*IQLIFQ
Trigger: TTGGAAGATCAGCTGTATTCACATAGCACTGAAGTA...ATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTGAGAGGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRSTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATCTTCATTCCGGCCGTaGTCCAGGATGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRSSFRP*SRMNSA
Trigger: TGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp AGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RCSSGDYSCHEEGWRAASFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...TGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTCCCTGGGTACTTTGCTaGTGTCCTCCGGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTPWVLC*CPPETH
Trigger: ATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGG...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGACATCGTTCTCCTGTaGCCTTCCCCTGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEDIVLL*PSPALA
Trigger: GGCTAAGGCAGGGGAAGGGCACAGGAGAACGATGTC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGCACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGPEMC*LKCLHW
Trigger: CCAGTGAAGACATTTGAGGCAGCACATCTCAGGACC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCAGGGGCTAGCACCCTaGTTTTCTTGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGQGLAP*FSCFQF
Trigger: AAACTGAAAGCAAGAAAAGCAGGGTGCTAGCCCCTG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGACTGACCGAGGGACATaGGGCAGTGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKTDRGT*GSEQRV
Trigger: CACTCTTTGCTCACTGCCCCATGTCCCTCGGTCAGT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAACTGACCGAGGGACATaGGGCAGTGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKTDRGT*GSEQRV
Trigger: CACTCTTTGCTCACTGCCCCATGTCCCTCGGTCAGT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp ACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGACTGACCGAGGGACATaGGGCAGTGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TFFPLNFSGLYLSLSFRVTDRGT*GSEQRV
Trigger: CACTCTTTGCTCACTGCCCCATGTCCCTCGGTCAGT...CACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGATACATGCAGCCCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRRYMQP*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGGGCTGCATGTATCT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp GTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCCTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSWVSRKPVFSGRSPRIFLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...GAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp AACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGACTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: NFSGLYLSLSFRVGFSEDCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...GTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGGACGTTATCGTAGGTaGAAGTCCGTTGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRGRYRR*KSVGSQ
Trigger: CTGACTCCCAACGGACTTCCACCTACGATAACGTCC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCAAGAGTATCTCCCTTaGAGTCACAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGQEYLP*SHRLGK
Trigger: CTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGGTGGGGTGGCAGAATaGGGTTCTCGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEGGVAE*GSRFSR
Trigger: TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTCAGCCGAGCCAGATCTaGGTCAATCCACAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTQPSQI*VNPQLE
Trigger: CTCTAGCTGTGGATTGACCCAGATCTGGCTCGGCTG...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR CCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATCAGTCACTGGGTGATTaGCACACTTGTCACTCACCC +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNQSLGD*HTCHSP
Trigger: GGGTGAGTGACAAGTGTGCCAATCACCCAGTGACTG...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGATCATTGCTCAGTCACTaGGTGATTGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRSLLSH*VIGTLV
Trigger: GACAAGTGTGCCAATCACCCAGTGACTGAGCAATGA...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR CAA 72 bp AACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGATACATGCAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: NFPASSGFVAIS*IVHPGRYMQPE
Trigger: TTCAGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
3UTR CAA 72 bp GACCTGATGAGATTCACACCAATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTAACAGCACAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DLMRFTPITVAR*STLILLTAQFS
Trigger: GCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCATCAGGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGAGTGGCCACAGCATCTaGCAAAAGGTGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWSGHSI*QKVLPF
Trigger: AAAAGGAAGCACCTTTTGTCAGATGCTGTGGCCACT...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR TCA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGATTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRLWRSP*LYILVD
Trigger: ATCTACCAGGATGTACAATCAAGGAGATCGCCACAA...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp TTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCCCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 4 (lower is better)
Translates to: FPLNFSGLYLSLSFRVGFPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...GAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATTCATCAACTCCTGCTaGGCCTTTGCCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKFINSC*AFASSA
Trigger: TGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR TCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGATCACTCTTTGGATCTaGGGAGTCCCTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWITLWI*GVPLMI
Trigger: GATCATGAGAGGGACTCCTCAGATCCAAAGAGTGAT...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACTATTGCCTGGGTCCTaGGATGTGCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKLLPGS*DVLPQM
Trigger: CATTTGAGGCAGCACATCTCAGGACCCAGGCAATAG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTGCTTCCAGTTTAAGTaGGTAGTTAGTGAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGCFQFK*VVSEAV
Trigger: CACCGCTTCACTAACTACTCACTTAAACTGGAAGCA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEWKAAI*SPVITL
Trigger: GAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCA...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTACAAAGTACCTCTGCTaGCAGTTCTTCACGATGGAC +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLTKYLC*QFFTMD
Trigger: GTCCATCGTGAAGAACTGGCAGCAGAGGTACTTTGT...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGATCCTGGTAGATACATaGAGCCCTGGGGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKILVDT*SPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGAT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATTCACCAGGTTGTCCTaGCCAGGCAGACGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEFTRLS*PGRRKM
Trigger: CATCTTCCGTCTGCCTGGGCAGGACAACCTGGTGAA...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAACCCTGGGTACTTTGCTaGTGTCCTCCGGAAACGCAT +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEPWVLC*CPPETH
Trigger: ATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGG...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKFPWVL*CCPPET
Trigger: CGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGCACCCTGCTTTTCTTaGTTTCAGTTTTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RINHTLVQPELGPVYCLGAPCFS*FQFYQK
Trigger: TTTCTGGTAAAACTGAAAGCAAGAAAAGCAGGGTGC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGGCTTGAGGCTGATTTaGCAACGTGTCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRGLRLI*QRVSSF
Trigger: AAAGGAGGAGACACGTTGGCAAATCAGCCTCAAGCC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAAGATACATGCAGCCCTaGGGCTTCGTGTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKRYMQP*GFVSSS
Trigger: TGAAGAGGACACGAAGCCCCAGGGCTGCATGTATCT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAAGGATGGGCACCAGATaGGGGCCGAATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKRMGTR*GPNFCS
Trigger: TGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTATTTCTCCACCAGGATaGGCACCAGATGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSISPPG*APDGGR
Trigger: TCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAAAT...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTGTCACGAGGAAGGATaGAGAGCTGCTTCATCAACT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGCHEEG*RAASST
Trigger: AGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLTGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCTCCTGGCTTTTCCCTaGGTACTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKLLAFP*VLCCCP
Trigger: AGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGACGTTATCGTAGGTaGAAGTCCGTTGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGRYRR*KSVGSQ
Trigger: CTGACTCCCAACGGACTTCCACCTACGATAACGTCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGGACGTTATCGTAGGTaGAAGTCCGTTGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTGRYRR*KSVGSQ
Trigger: CTGACTCCCAACGGACTTCCACCTACGATAACGTCC...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGACGTTATCGTAGGTaGAAGTCCGTTGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKGRYRR*KSVGSQ
Trigger: CTGACTCCCAACGGACTTCCACCTACGATAACGTCC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATCAAGAGTATCTCCCTTaGAGTCACAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDQEYLP*SHRLGK
Trigger: CTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTG...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRCLHWT*SCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGCTCAAATGTCTTCACTaGACGTGGTCATGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWLKCLH*TWSCLR
Trigger: TCTCAGGCATGACCACGTCCAGTGAAGACATTTGAG...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTTGGAGAAGTCCTaGAGAATGGGCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRKLEKS*RMGILV
Trigger: CACCAGGATGCCCATTCTCCAGGACTTCTCCAACTT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTCTCATCCAAGCGCTaGCCAAACACTGGAATGATT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGVSSKR*PNTGMI
Trigger: AATCATTCCAGTGTTTGGCCAGCGCTTGGATGAGAC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467265.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTGGGAGTCAGTATCTaGCAAGAGAGAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGVGVSI*QERGEN
Trigger: ATTTTCTCCTCTCTCTTGTCAGATACTGACTCCCAC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR TCA 90 bp ATTCACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTTGTTAACAGCACACCCATGAGGCTGGAATaGTTTCAAAGACAAACTTCC +
Preference number: 4 (lower is better)
Translates to: IHTNHSSQVVHTHLVNSTPMRLE*FQRQTS
Trigger: GGAAGTTTGTCTTTGAAATCATTCCAGCCTCATGGG...TGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATCGGTTAGGGAGTGTTTaGGTCCTTTTACGAGATTGC +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDRLGSV*VLLRDC
Trigger: GCAATCTCGTAAAAGGACTCAAACACTCCCTAACCG...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACCTCCACTTTCAGGTTaGAATCCCAGTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKPPLSG*NPSSLA
Trigger: TGCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR TCA 90 bp GTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCTCTCTGGACTGTATTTaGGTCTCTCTTTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSWVSRKPVFSGRSPRIFSLDCI*VSLSEW
Trigger: CCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGA...GAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRSTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAATCCTGGTAGATACATaGAGCCCTGGGGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEILVDT*SPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGAT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAAAAGCGTCTCTCAGCTaGTTCACCAGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEKASLS*FTRLSC
Trigger: GCAGGACAACCTGGTGAAGCAGCTGAGAGACGCTTT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAAGGGAAGCCACAGTGTaGACATCTGTGTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKREATV*TSVSLS
Trigger: TGACAGAGACACAGATGTGCACACTGTGGCTTCCCT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGTTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGATCTCCATTTTGCTaGTGTTGGCACCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGRSPFC*CWHPEK
Trigger: CTTTTCAGGGTGCCAACAGCAGCAAAATGGAGATCT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCACTGGACGTGGTCATaGCTGAGACCAGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKHWTWS*LRPEWN
Trigger: ATTCCATTCTGGTCTCAGGCATGACCACGTCCAGTG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGGTCCTGAGATGTGCTaGCTCAAATGTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTGPEMC*LKCLHW
Trigger: CCAGTGAAGACATTTGAGGCAGCACATCTCAGGACC...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTTCCTTTTTCCTGCGTaGGAGTCAGTATCTGACAAG +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGFLFPA*ESVSDK
Trigger: CTTGTCAGATACTGACTCCCACGCAGGAAAAAGGAA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGTTCCTTTTTCCTGCGTaGGAGTCAGTATCTGACAAG +
Preference number: 4 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWFLFPA*ESVSDK
Trigger: CTTGTCAGATACTGACTCCCACGCAGGAAAAAGGAA...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACTTCCCAGCTTCTTCTaGGTTTGTGGCGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKLPSFF*VCGDLL
Trigger: AAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCGGAGGTCTTCAGTaGCATCCCAGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSFGGLQ*HPSLQS
Trigger: GCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAA...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTCCTTTCGTAGCTCTTaGACCATCCTCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGSFRSS*TILCKE
Trigger: TTCTTTGCAGAGGATGGTCCAAGAGCTACGAAAGGA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCTGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTTGTCTTCACTGGACGTaGTCATGCCTGAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTCLHWT*SCLRPE
Trigger: TTCTGGTCTCAGGCATGACCACGTCCAGTGAAGACA...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGAAGTTGGAGAAGTCCTaGAGAATGGGCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKKLEKS*RMGILV
Trigger: CACCAGGATGCCCATTCTCCAGGACTTCTCCAACTT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TACTCTGAGAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGAGGCCTTACATGGGATaGCCTGGACTAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: YSEKGITFHGLAGNQFSLRPYMG*PGLKEE
Trigger: TTCTTCCTTTAGTCCAGGCCATCCCATGTAAGGCCT...CAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTCTCAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCCCACTGAACTTCTCTaGACTGTATTTGAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FPTELLWTVFESLFQSGLPTELL*TVFESL
Trigger: GAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGG...AAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
3UTR CAA 72 bp ACACCAATCACAGTAGCCAGGTTGTCCACACTCATCTaGTTAACAGCACAGTTCAGCTGTATTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: TPITVARLSTLI*LTAQFSCISCR
Trigger: CCTACATGAAATACAGCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR TCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCTGCTGTTGGCACCCTaGAAAGCTGATGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKLLLAP*KADVKK
Trigger: TTTCTTGACATCAGCTTTTCAGGGTGCCAACAGCAG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACAGAAATATCCCAGTTaGCACTTCCCTCTGCGTCAT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKQKYPS*HFPLRH
Trigger: ATGACGCAGAGGGAAGTGTCAACTGGGATATTTCTG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR GCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGAGCACAAAGTACCTCTaGTGCCAGTTCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKSTKYL*CQFFTM
Trigger: CATCGTGAAGAACTGGCAGCAGAGGTACTTTGTGCT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR GCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATTTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGAGTCTGTCACAGTTTaGGCCCTTCTTGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRESVTV*ALLVFS
Trigger: TGAAAAGACAAGAAGGGCGCAAACTGTGACAGACTC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAAACCGAAAGGTTGGCTaGAGCCTTCTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGENRKVG*SLLKRK
Trigger: CTTCCTCTTCAGAAGGCTCCAGCCAACCTTTCGGTT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409030.7
ENST00000409220.5
CDS-3UTR CCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTGTCCCATGCGATTCTaGTCCCATGAGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSCPMRF*SHEAGM
Trigger: CATTCCAGCCTCATGGGACCAGAATCGCATGGGACA...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATGTATATCCTTGGACTTaGGGAAGAGGACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNVYPWT*GRGLHG
Trigger: ACCATGAAGTCCTCTTCCCCAAGTCCAAGGATATAC...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKTGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATTTCAGAGTTTGGACTaGCAAGAGTATCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRFQSLD*QEYLPW
Trigger: CCAAGGGAGATACTCTTGCCAGTCCAAACTCTGAAA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACCCAGTTTCAGAGTTTaGACTGGCAAGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKPSFRV*TGKSIS
Trigger: GGAGATACTCTTGCCAGTCCAAACTCTGAAACTGGG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATTCCTTTCGTAGCTCTTaGACCATCCTCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDSFRSS*TILCKE
Trigger: TTCTTTGCAGAGGATGGTCCAAGAGCTACGAAAGGA...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTTGCTATATCTTCCTaGTTTCCAAGTCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFAISS*FPSQAS
Trigger: GCTTGCTTGACTTGGAAACCAGGAAGATATAGCAAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479844.1
3UTR CAA 72 bp TATACATTTTTCCCACTGAACTTCTCTGGACTGTATTaGAGTCTCTCTTTCAGAGTGGGCTTCAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: YTFFPLNFSGLY*SLSFRVGFSED
Trigger: GTCCTCACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAACTGCTGTTGGCACCCTaGAAAGCTGATGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGELLLAP*KADVKK
Trigger: TTTCTTGACATCAGCTTTTCAGGGTGCCAACAGCAG...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGGACGTGGTCATGCCTaGGACCAGAATGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEGRGHA*DQNGIK
Trigger: TTTTATTCCATTCTGGTCTCAGGCATGACCACGTCC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTAATCTCAGGCCTTACTaGGTTGAGGTCGTGATAAAC +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTNLRPY*VEVVIN
Trigger: GTTTATCACGACCTCAACTCAGTAAGGCCTGAGATT...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACTCCTTTCTCTTAGATaGAAGGTCCATCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKLLSLR*KVHPSV
Trigger: GACAGATGGATGGACCTTTCATCTAAGAGAAAGGAG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR TCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTGCTTCCAGTTTAAGTaGGTAGTTAGTGAAGCGGTG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKCFQFK*VVSEAV
Trigger: CACCGCTTCACTAACTACTCACTTAAACTGGAAGCA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATTTCATGTAGGAACCTaGAGATGTAGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKFHVGT*RCSSGD
Trigger: GTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGAGTCTGTCACAGTTTaGGCCCTTCTTGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKESVTV*ALLVFS
Trigger: TGAAAAGACAAGAAGGGCGCAAACTGTGACAGACTC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAAGAGGACTTCATaGTCTCTGATCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKGKRTS*SLIIIV
Trigger: GACTATGATGATCAGAGACCATGAAGTCCTCTTCCC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAACAGGGGTATATCCTTaGACTTGGGGAAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGETGVYP*TWGRGL
Trigger: AAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp AATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTTCCTTTCGTAGCTCTTaGACCATCCTCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: NVLSLSENNFVSPSSDSTSFRSS*TILCKE
Trigger: TTCTTTGCAGAGGATGGTCCAAGAGCTACGAAAGGA...AGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTCCTTTCGTAGCTCTTaGACCATCCTCTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKSFRSS*TILCKE
Trigger: TTCTTTGCAGAGGATGGTCCAAGAGCTACGAAAGGA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAAACACAGCACTCCATaGATGAGGACTCAAAAGATG +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDKHSTP*MRTQKM
Trigger: CATCTTTTGAGTCCTCATCCATGGAGTGCTGTGTTT...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCAACAATAGGAATCACGTTTCATaGGTTAGCAGGAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: WVSRKPVFSGRSPRIFNNRNHVS*VSRKPV
Trigger: AACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT...ATTGTTGAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTAGTCATCACACTCCTTaGCCGAGCTATAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSSHHTP*PSYREE
Trigger: TTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACT...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGATAAAACAATCCATTTaGATACAGCGATGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGIKQSI*IQRWMV
Trigger: GACCATCCATCGCTGTATTCAAATGGATTGTTTTAT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAAGATCTCCATTTTGCTaGTGTTGGCACCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGERSPFC*CWHPEK
Trigger: CTTTTCAGGGTGCCAACAGCAGCAAAATGGAGATCT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATCTTGGACCATCCTCTaGAAAGAATCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRSWTIL*KESISS
Trigger: AGAGGAAATTGATTCTTTGCAGAGGATGGTCCAAGA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGAAACACAGCACTCCATaGATGAGGACTCAAAAGATG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKKHSTP*MRTQKM
Trigger: CATCTTTTGAGTCCTCATCCATGGAGTGCTGTGTTT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGTCTAATAGTAAGTTaGAGAAGTCCTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRSLIVS*RSPGEW
Trigger: CCATTCTCCAGGACTTCTCCAACTTACTATTAGACT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATATAAAACAATCCATTTaGATACAGCGATGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDIKQSI*IQRWMV
Trigger: GACCATCCATCGCTGTATTCAAATGGATTGTTTTAT...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGATTTTGTTCCTCCTTATaGTTGCTTCACAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SFPSQRIILFPRHQIALRFCSSL*LLHKQS
Trigger: AGATTGCTTGTGAAGCAATCATAAGGAGGAACAAAA...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATCTTGGACCATCCTCTaGAAAGAATCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKSWTIL*KESISS
Trigger: AGAGGAAATTGATTCTTTGCAGAGGATGGTCCAAGA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR GCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCACCCTGCTTTTCTTaGTTTCAGTTTTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKAPCFS*FQFYQK
Trigger: TTTCTGGTAAAACTGAAAGCAAGAAAAGCAGGGTGC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAAGTCTAATAGTAAGTTaGAGAAGTCCTGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKSLIVS*RSPGEW
Trigger: CCATTCTCCAGGACTTCTCCAACTTACTATTAGACT...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp ACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGAAACCAGTTTTCTCTaGACGTTCACCCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: TFFPLNFSGLYLSLSFRVETSFL*TFTQNF
Trigger: AAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTC...CACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR TCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGATTTATGGGGAAATTTaGTGTTTCCCTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKIYGEI*CFPQMS
Trigger: GGACATTTGAGGGAAACATCAAATTTCCCCATAAAT...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATTTTGTTCCTCCTTATaGTTGCTTCACAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKFCSSL*LLHKQS
Trigger: AGATTGCTTGTGAAGCAATCATAAGGAGGAACAAAA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CCA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: FPSQRIILFPRHQIALRKCLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAATAAAACAATCCATTTaGATACAGCGATGGATGGTC +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEIKQSI*IQRWMV
Trigger: GACCATCCATCGCTGTATTCAAATGGATTGTTTTAT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CCA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGCCTGAGACCAGAATaGAATAAAACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGECLRPE*NKTIHL
Trigger: CAAATGGATTGTTTTATTCCATTCTGGTCTCAGGCA...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR TCA 90 bp ATGTTGTATACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTATACATTTTTCCCACTaGACTTCTCTGGACTGTATT +
Preference number: 4 (lower is better)
Translates to: MLYTFFPLNFSGLYLSLSIHFSH*TSLDCI
Trigger: AATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTAT...AGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGTATACAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS CCA 90 bp CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACTGTGCGCGAGCCAAAGCAGGGCGAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: RVHLTRECQTVGAGQ*VRALCASQSRARHC
Trigger: GCAATGCCTCGCCCTGCTTTGGCTCGCGCACAGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481684.5
CDS-3UTR CAA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGGCCTCTCCAGCGGGTaGGGGGTGGACGATGGATGG +
Preference number: 5 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRGLSSG*GVDDGW
Trigger: CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCC...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: HRAGTLRTGSREPRALGGFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS GCA 90 bp CTCTCCAGCGGGTTGGGGGTGGACGATGGATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTCCTTGACCGAGCTGCTGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: LSSGLGVDDGWKAAI*SPVITLLDRAAAET
Trigger: TGTCTCTGCAGCAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463483.5
ENST00000491237.5
CDS CCA 90 bp CCCATCTTGATGGGCCTCTCCAGCGGGTTGGGGGTGGACGATGGATaGAAGGCAGCCATCTGCTCGCCAGTCATCACACTCCTTGACCGA +
Preference number: 5 (lower is better)
Translates to: PILMGLSSGLGVDDG*KAAICSPVITLLDR
Trigger: TCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCCCATCAAGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000456116.6
ENST00000463483.5
ENST00000467265.5
ENST00000473986.1
ENST00000481684.5
ENST00000485573.5
ENST00000485700.5
ENST00000488795.1
ENST00000491237.5
ENST00000497079.5
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCGGCCTCTCCAGCGGGTaGGGGGTGGACGATGGATGG +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCGLSSG*GVDDGW
Trigger: CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCC...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCCGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS GCA 90 bp CTCTCCAGCGGGTTGGGGGTGGACGATGGATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTCCTTGACCGAGCTATTTTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSSGLGVDDGWKAAI*SPVITLLDRAIFAA
Trigger: GGCTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409202.8
ENST00000456116.6
ENST00000467265.5
ENST00000488795.1
CDS CCA 90 bp CGGCACCGCGGCGGGCCCCGTCATTCTGCAAACCGAAAGGTTGGCTaGAGCCTTCTGAAGAGGAAGTGGCCACAGCATCTGACAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RHRGGPRHSANRKVG*SLLKRKWPQHLTKG
Trigger: ACCTTTTGTCAGATGCTGTGGCCACTTCCTCTTCAGAAGGCTCCAGCCAACCTTTCGGTTTGCAGAATGACGGGGCCCGCCGCGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409220.5
ENST00000463061.1
ENST00000496266.1
CDS CCA 90 bp AGTCCGGCACCGCGGCGGGCCCCGTCATTCTGCAAACCGAAAGGTTaGCTGGAGCCTTCTGAAGAGGAAGTGGCCACAGCATCTGACAAA +
Preference number: 5 (lower is better)
Translates to: SPAPRRAPSFCKPKG*LEPSEEEVATASDK
Trigger: TTTGTCAGATGCTGTGGCCACTTCCTCTTCAGAAGGCTCCAGCCAACCTTTCGGTTTGCAGAATGACGGGGCCCGCCGCGGTGCCGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409220.5
ENST00000463061.1
ENST00000496266.1
CDS-3UTR CAA 90 bp GATGGGCACCAGATGGGGGCCGAATTTCTGTTCATAGGCCACAGTCTCATCCAAGGCCTCTCCAGCGGGTaGGGGGTGGACGATGGATGG +
Preference number: 5 (lower is better)
Translates to: DGHQMGAEFLFIGHSLIQGLSSG*GVDDGW
Trigger: CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCC...TTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CAA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCTTGGAGTCACAGGCTaGGGAAGAGAGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQLGVTG*GRECTG
Trigger: GCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGCCTCCACTTTCAGGTaGAAATCCCAGTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AAHRAGTLRTGSREPRALASTFR*KSQFLG
Trigger: GCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGGC...CAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CAA 90 bp TTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGACCATCACCGCCCTGTaGCCAGTCTTGACTCAGAGC +
Preference number: 5 (lower is better)
Translates to: FVSCPQSRNPSYWLQGTTTITAL*PVLTQS
Trigger: GCTCTGAGTCAAGACTGGCAACAGGGCGGTGATGGT...CGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS GCA 90 bp CTCTCCAGCGGGTTGGGGGTGGACGATGGATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTCCTTGACCGAGCTATAGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LSSGLGVDDGWKAAI*SPVITLLDRAIERN
Trigger: GTTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409220.5
ENST00000473986.1
ENST00000497079.5
CDS GCA 90 bp TCCCTGGGTACTTTGCTGCTGTCCTCCGGAAACGCATCGCTCGGCTaGTGTCCGGTGGGGCTGGTTGTATCAGAGTCGCTTGTCATGCTA +
Preference number: 5 (lower is better)
Translates to: SLGTLLLSSGNASLG*CPVGLVVSESLVML
Trigger: TAGCATGACAAGCGACTCTGATACAACCAGCCCCACCGGACAGCAGCCGAGCGATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS GCA 90 bp CTCTCCAGCGGGTTGGGGGTGGACGATGGATGGAAGGCAGCCATCTaGTCGCCAGTCATCACACTCCTTGACCGAGCTTTGCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: LSSGLGVDDGWKAAI*SPVITLLDRALLRS
Trigger: AGATCTCAGCAAAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCGTCCACCCCCAACCCGCTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481684.5
ENST00000485573.5
CDS CCA 90 bp TCAGAGTTTGGACTGGCAAGAGTATCTCCCTTGGAGTCACAGGCTTaGGAAGAGAGTGCACTGGCTTCCTCCCCAGGGGACCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SEFGLARVSPLESQA*EESALASSPGDPGR
Trigger: CCTGCCAGGGTCCCCTGGGGAGGAAGCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTGCCAGTCCAAACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS CCA 90 bp AGGTCAGTCTGGGATGAAGATCCCAGTTCCCAGCCGAGCCAGATCTaGGTCAATCCACAGCTAGAGTTGCCACAGGGGTGGCGCACAGCA +
Preference number: 5 (lower is better)
Translates to: RSVWDEDPSSQPSQI*VNPQLELPQGWRTA
Trigger: TGCTGTGCGCCACCCCTGTGGCAACTCTAGCTGTGGATTGACCCAGATCTGGCTCGGCTGGGAACTGGGATCTTCATCCCAGACTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000497259.5
CDS-3UTR CAA 90 bp CTTCATCAACTCCTGCTGAGCCTTTGCCTCATCCGCATTCGTGAGCTGCCCACAAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: LHQLLLSLCLIRIRELPTSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...TGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CAA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGTCCGGTGGGGCTGGTaGTATCAGAGTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCVRWGW*YQSRLS
Trigger: TGACAAGCGACTCTGATACAACCAGCCCCACCGGAC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGTAGGTGGAAGTCCGTaGGGAGTCAGAAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQVGGSP*GVRKLA
Trigger: CGCCAACTTTCTGACTCCCAACGGACTTCCACCTAC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGCCTCCACTTTCAGGTaGAAATCCCAGTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPASTFR*KSQFLG
Trigger: GCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGGC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR CAA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATCCACAGCTAGAGTaGCCACAGGGGTGGCGCACA +
Preference number: 5 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASNPQLE*PQGWRT
Trigger: TGTGCGCCACCCCTGTGGCAACTCTAGCTGTGGATT...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479844.1
CDS TCA 90 bp CGATGGATGGAAGGCAGCCATCTGCTCGCCAGTCATCACACTCCTTaGCCGAGCTATAGAGAGGAACAGACAGGCCGACTGACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: RWMEGSHLLASHHTP*PSYREEQTGRLTEG
Trigger: TCCCTCGGTCAGTCGGCCTGTCTGTTCCTCTCTATAGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTTCCATCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409220.5
ENST00000473986.1
ENST00000497079.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCGGCCTCTCCAGCGGGTaGGGGGTGGACGATGGATGG +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLGLSSG*GVDDGW
Trigger: CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCC...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGGCCACTGGAGCTTTCTaGGGGTCATTTTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQATGAF*GSFFWA
Trigger: TGCCCAGAAAAATGACCCCAAGAAAGCTCCAGTGGC...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTCAGTCATCACACTCCTaGACCGAGCTATTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: SCPQSRNPSYWLQGTTGSQSSHS*TELFSQ
Trigger: CTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACTG...AGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS GCA 90 bp TACGAGATTGCATTTTCCAGTCTCCTGGCTTTTCCCTGGGTACTTTaGTGCTGTCCTCCGGAAACGCATCGCTCGGCTGCTGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: YEIAFSSLLAFPWVL*CCPPETHRSAAVRW
Trigger: CCACCGGACAGCAGCCGAGCGATGCGTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAAGCCAGGAGACTGGAAAATGCAATCTCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS CCA 90 bp TGGAAGAAGCCAGTAAAGCCAAGTCTGAATCATTGCAGGAGACTCTaGCTCGGAGGGTCCTACGCCCGCGGAGTCTCGCTGATTGCTAGC +
Preference number: 5 (lower is better)
Translates to: WKKPVKPSLNHCRRL*LGGSYARGVSLIAS
Trigger: GCTAGCAATCAGCGAGACTCCGCGGGCGTAGGACCCTCCGAGCCAGAGTCTCCTGCAATGATTCAGACTTGGCTTTACTGGCTTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463483.5
CDS-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp GCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGATTGTCCACACTCATCTaGTTAACAGCACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AHRAGTLRTGSREPRALGLSTLI*LTAQFS
Trigger: GCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAA...TCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CAA 90 bp GCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTA +
Preference number: 5 (lower is better)
Translates to: AHRAGTLRTGSREPRALGITVAR*STLILL
Trigger: TAACAAGATGAGTGTGGACAACCTGGCTACTGTGAT...TCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CAA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASDRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: SWRMGILVGWQNGVLASADRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCATTTTCCCTGGGTACTTaGCTGCTGTCCTCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: SWRMGILVGWQNGVLASAFSLGT*LLSSGN
Trigger: GTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAA...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATTTTCCCTGGGTACTTaGCTGCTGTCCTCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRFSLGT*LLSSGN
Trigger: GTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAA...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGCAAGAGTATCTCCCTaGGAGTCACAGGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRARVSP*ESQAWE
Trigger: TTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTGC...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACGGGCTCTGGGAGGTCAGTTTGCGCCCTTCTaGTCTTTTCACTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: HRAGTLRTGSREPRALGGQFAPF*SFHSFP
Trigger: AGGGAAAGAGTGAAAAGACAAGAAGGGCGCAAACTG...ACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS GCA 90 bp GGTGCTTATCTATGGAAGAAGCCAGTAAAGCCAAGTCTGAATCATTaGAGGAGACTCTGGCTCGGAGGGTCCTACGCCCGCGGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: GAYLWKKPVKPSLNH*RRLWLGGSYARGVS
Trigger: CGAGACTCCGCGGGCGTAGGACCCTCCGAGCCAGAGTCTCCTGCAATGATTCAGACTTGGCTTTACTGGCTTCTTCCATAGATAAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463483.5
CDS-3UTR CAA 90 bp TGCAGATGTAGCTCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: CRCSSGDYSCHEEGWRAASCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...AGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CAA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGCATAGTCATCACTCTTaGGATCTGAGGAGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQHSHHS*DLRSPS
Trigger: AGAGGGACTCCTCAGATCCAAAGAGTGATGACTATG...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCGTCCGGTGGGGCTGGTaGTATCAGAGTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFVRWGW*YQSRLS
Trigger: TGACAAGCGACTCTGATACAACCAGCCCCACCGGAC...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAAGTTGGCGCAAGTCTaGAGACATCGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCKLAQV*RHRSPV
Trigger: CACAGGAGAACGATGTCTCAAGACTTGCGCCAACTT...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGTTCTCCAGTTCTTCATaGAGCCTCACCACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: PGEWASWWGGRMGFSLQQFSSSS*SLTTLA
Trigger: GGCTAAAGTGGTGAGGCTCAATGAAGAACTGGAGAA...CTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTAGTCCAGCCTGAGTaGGGGCCAGTCTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVLVQPE*GPVYCL
Trigger: CAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCTTAGTCCAGCCTGAGTaGGGGCCAGTCTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCLVQPE*GPVYCL
Trigger: CAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAA...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS TCA 90 bp CAGCTCCGGTCTACAGCTACCAGCGTGAGCGACGCAGAAGATGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QLRSTATSVSDAEDG*FLHFHLRYRVHLTR
Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGTAGCTGTAGACCGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481684.5
CDS CCA 90 bp GGAACAGCTCCGGTCTACAGCTACCAGCGTGAGCGACGCAGAAGATaGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: GTAPVYSYQRERRRR*VISAFPSEVPGSSH
Trigger: GTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGTAGCTGTAGACCGGAGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481684.5
CDS CCA 90 bp ACTCCCCAAATTGCCACCCGAGAGCAGGCCTTACATGGGATGGCCTaGACTAAAGGAAGAACCCAATGGAAGCAGGAAGGTTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TPQIATREQALHGMA*TKGRTQWKQEGSLH
Trigger: GTGCAGAGAACCTTCCTGCTTCCATTGGGTTCTTCCTTTAGTCCAGGCCATCCCATGTAAGGCCTGCTCTCGGGTGGCAATTTGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp TCAGGAGACTATAGTTGTCACGAGGAAGGATGGAGAGCTGCTTCATCAACTCCTTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: SGDYSCHEEGWRAASSTPFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...AGGAGTTGATGAAGCAGCTCTCCATCCTTCCTCGTGACAACTATAGTCTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473986.1
ENST00000488795.1
CDS-3UTR CAA 90 bp TCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCACATAGTCATCACTCTTaGGATCTGAGGAGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SSLSWGQSIAWVLRCAASHSHHS*DLRSPS
Trigger: AGAGGGACTCCTCAGATCCAAAGAGTGATGACTATG...TGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVDRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCACCGGTTAGGGAGTGTTaGAGTCCTTTTACGAGATTG +
Preference number: 5 (lower is better)
Translates to: SWRMGILVGWQNGVLASAPVREC*SPFTRL
Trigger: CAATCTCGTAAAAGGACTCAAACACTCCCTAACCGG...TGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGCAAGAGTATCTCCCTaGGAGTCACAGGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNARVSP*ESQAWE
Trigger: TTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTGC...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCAGCCCGATTTGACAAATTCCTaGACTTCTTCTTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: WASWWGGRMGFSLQQMQPDLTNS*TSSSKA
Trigger: GGCCTTGGAAGAAGAAGTCAAGGAATTTGTCAAATC...GGGCTGCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GTGTGCACATCTGTGTCTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTTGAAAACTGCAGAGTaGATACCAGGGGCCTCTCAC +
Preference number: 5 (lower is better)
Translates to: VCTSVSLSKEGRSPASKALKTAE*IPGASH
Trigger: GTGAGAGGCCCCTGGTATCAACTCTGCAGTTTTCAA...CGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACACAGATGTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CAA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRFVAIS*IVHPGR
Trigger: TCTACCAGGATGTACAATCAAGGAGATCGCCACAAA...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCGCCACTGGAGCTTTCTaGGGGTCATTTTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFATGAF*GSFFWA
Trigger: TGCCCAGAAAAATGACCCCAAGAAAGCTCCAGTGGC...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCTTTTCCCTGGGTACTTaGCTGCTGTCCTCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFFSLGT*LLSSGN
Trigger: GTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAA...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGTAGGTGGAAGTCCGTaGGGAGTCAGAAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLVGGSP*GVRKLA
Trigger: CGCCAACTTTCTGACTCCCAACGGACTTCCACCTAC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTTTAGTCCAGCCTGAGTaGGGGCCAGTCTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLLVQPE*GPVYCL
Trigger: CAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAA...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAAGGCTTGAGGCTGATTaGCCAACGTGTCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPRLEAD*PTCLLL
Trigger: AAGGAGGAGACACGTTGGCAAATCAGCCTCAAGCCT...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS CCA 90 bp GAGCAGGCCTTACATGGGATGGCCTGGACTAAAGGAAGAACCCAATaGAAGCAGGAAGGTTCTCTGCACCTTACCATGCTACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EQALHGMAWTKGRTQ*KQEGSLHLTMLLKL
Trigger: CAGCTTCAGTAGCATGGTAAGGTGCAGAGAACCTTCCTGCTTCCATTGGGTTCTTCCTTTAGTCCAGGCCATCCCATGTAAGGCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS CCA 90 bp CTAAAACTCCCCAAATTGCCACCCGAGAGCAGGCCTTACATGGGATaGCCTGGACTAAAGGAAGAACCCAATGGAAGCAGGAAGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LKLPKLPPESRPYMG*PGLKEEPNGSRKVL
Trigger: GAGAACCTTCCTGCTTCCATTGGGTTCTTCCTTTAGTCCAGGCCATCCCATGTAAGGCCTGCTCTCGGGTGGCAATTTGGGGAGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCCTCTCCAGCGGGTaGGGGGTGGACGATGGATGG +
Preference number: 5 (lower is better)
Translates to: FPSQRIILFPRHQIALRKGLSSG*GVDDGW
Trigger: CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCC...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CAA 90 bp CATCTGTGTCTGTCAAAGGAGGGCCGCTCCCCAGCATCAAAAGCGTCTCTCAGCTTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: HLCLSKEGRSPASKASLSFVAIS*IVHPGR
Trigger: TCTACCAGGATGTACAATCAAGGAGATCGCCACAAA...GCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHDRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCCGGTTAGGGAGTGTTaGAGTCCTTTTACGAGATTG +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCPVREC*SPFTRL
Trigger: CAATCTCGTAAAAGGACTCAAACACTCCCTAACCGG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATTTGGGAGTCAGAAAGTaGGCGCAAGTCTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNLGVRK*AQVLRH
Trigger: ATGTCTCAAGACTTGCGCCAACTTTCTGACTCCCAA...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGCAAGAGTATCTCCCTaGGAGTCACAGGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLARVSP*ESQAWE
Trigger: TTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTGC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGCGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGATGCGATTTGACAAATTCCTaGACTTCTTCTTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ENGHPGGVAEWGSRFSRCDLTNS*TSSSKA
Trigger: GGCCTTGGAAGAAGAAGTCAAGGAATTTGTCAAATC...GCATCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCTTAGTCCAGCCTGAGTaGGGGCCAGTCTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLLVQPE*GPVYCL
Trigger: CAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAA...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCTGCCAGTTTGCGCCCTTCTaGTCTTTTCACTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RWMVRDVHTHLCSPSPSCQFAPF*SFHSFP
Trigger: AGGGAAAGAGTGAAAAGACAAGAAGGGCGCAAACTG...GCAGGAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS TCA 90 bp CCAAAATCGGTTTTCCTGAACCCAAATCCACTCTCTCTGAGCCCTTaGCTGAGTGTCACTACCATCACCGCCCTGTTGCCAGTCTTGACT +
Preference number: 5 (lower is better)
Translates to: PKSVFLNPNPLSLSP*LSVTTITALLPVLT
Trigger: AGTCAAGACTGGCAACAGGGCGGTGATGGTAGTGACACTCAGTCAAGGGCTCAGAGAGAGTGGATTTGGGTTCAGGAAAACCGATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473986.1
CDS-3UTR CAA 90 bp TACTCTGAGAAAGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGTTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: YSEKGITFHGLAGNQFSLFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...CAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCTTTCTCAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTTGTGGCGATCTCCTaGATTGTACATCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVFVAIS*IVHPGR
Trigger: TCTACCAGGATGTACAATCAAGGAGATCGCCACAAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
CDS-3UTR CAA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: SFPSQRIILFPRHQIALRSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTGTCCACACTCATCTaGTTAACAGCACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVLSTLI*LTAQFS
Trigger: GCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAA...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTA +
Preference number: 5 (lower is better)
Translates to: LSWGQSIAWVLRCAASNVITVAR*STLILL
Trigger: TAACAAGATGAGTGTGGACAACCTGGCTACTGTGAT...GACATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTA +
Preference number: 5 (lower is better)
Translates to: SLSWGQSIAWVLRCAASNITVAR*STLILL
Trigger: TAACAAGATGAGTGTGGACAACCTGGCTACTGTGAT...ATTTGAGGCAGCACATCTCAGGACCCAGGCAATAGACTGGCCCCAACTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGCCACTGGAGCTTTCTaGGGGTCATTTTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RINHTLVQPELGPVYCLGATGAF*GSFFWA
Trigger: TGCCCAGAAAAATGACCCCAAGAAAGCTCCAGTGGC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTCCCGGTTAGGGAGTGTTaGAGTCCTTTTACGAGATTG +
Preference number: 5 (lower is better)
Translates to: TAMDGQRCPHTSLLTLTFPVREC*SPFTRL
Trigger: CAATCTCGTAAAAGGACTCAAACACTCCCTAACCGG...GAAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCATTGGGAGTCAGAAAGTaGGCGCAAGTCTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPLGVRK*AQVLRH
Trigger: ATGTCTCAAGACTTGCGCCAACTTTCTGACTCCCAA...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCTTGGAGTCACAGGCTaGGGAAGAGAGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLGVTG*GRECTG
Trigger: GCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTGCCCAGTTTCAGAGTTaGGACTGGCAAGAGTATCTC +
Preference number: 5 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLAQFQS*DWQEYL
Trigger: GAGATACTCTTGCCAGTCCAAACTCTGAAACTGGGC...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCCAGTTTCAGAGTTaGGACTGGCAAGAGTATCTC +
Preference number: 5 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHAQFQS*DWQEYL
Trigger: GAGATACTCTTGCCAGTCCAAACTCTGAAACTGGGC...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SFPSQRIILFPRHQIALRRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTGGAGAATGGGCATCCTGGTGGGGTGGCAGAATGGGGTTCTCGCTTCAGCAGAGGTTCCTTCATGGATTaGACAAATTCCTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: LENGHPGGVAEWGSRFSRGSFMD*TNSLTS
Trigger: AGAAGTCAAGGAATTTGTCAAATCCATGAAGGAACC...TCTGCTGAAGCGAGAACCCCATTCTGCCACCCCACCAGGATGCCCATTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SFPSQRIILFPRHQIALRRKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ATTCGTGAGCTGCCCACAGAGCAGGAACCCTTCGTACTGGCTCCAGGGAACCACTTCTTTCTGATGGGGTaGAAAACTGCAGAGTTGATA +
Preference number: 5 (lower is better)
Translates to: IRELPTEQEPFVLAPGNHFFLMG*KTAELI
Trigger: TATCAACTCTGCAGTTTTCAACCCCATCAGAAAGAA...GTGGTTCCCTGGAGCCAGTACGAAGGGTTCCTGCTCTGTGGGCAGCTCACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488795.1
CDS TCA 90 bp CAAAGACAAACTTCCCAGCTTCTTCTGGGTTTGTGGCGATCTCCTTaGTTGTACATCCTGGTAGATACATGCAGCCCTGGGGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: QRQTSQLLLGLWRSP*LYILVDTCSPGASC
Trigger: ACACGAAGCCCCAGGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAAGTTTGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000456116.6
ENST00000463483.5
ENST00000467265.5
ENST00000481684.5
ENST00000485700.5
ENST00000497079.5
CDS-3UTR CAA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAATTCAGCCAGCCCATCTaGATGGGCCTCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKFSQPI*MGLSSG
Trigger: CCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAA...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
CDS-3UTR CAA 90 bp ACATTTTTCCCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGAGCTGCTTCACCAGGTaGTCCTGCCCAGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: TFFPLNFSGLYLSLSFRVSCFTR*SCPGRR
Trigger: CCGTCTGCCTGGGCAGGACAACCTGGTGAAGCAGCT...CACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGGGAAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCATTGTCCACACTCATCTaGTTAACAGCACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPLSTLI*LTAQFS
Trigger: GCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAA...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATCATAGTCATCACTCTTaGGATCTGAGGAGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHHSHHS*DLRSPS
Trigger: AGAGGGACTCCTCAGATCCAAAGAGTGATGACTATG...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTAAGTTGGCGCAAGTCTaGAGACATCGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RINHTLVQPELGPVYCLGKLAQV*RHRSPV
Trigger: CACAGGAGAACGATGTCTCAAGACTTGCGCCAACTT...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCACCTTTTGGGAGTCAGAAAGTaGGCGCAAGTCTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: YSDGWSEMSTHISAHPHLLGVRK*AQVLRH
Trigger: ATGTCTCAAGACTTGCGCCAACTTTCTGACTCCCAA...AAGGTGAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGTAGGTGGAAGTCCGTaGGGAGTCAGAAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGVGGSP*GVRKLA
Trigger: CGCCAACTTTCTGACTCCCAACGGACTTCCACCTAC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAATGGGCATCCTGGCTTGGAGTCACAGGCTaGGGAAGAGAGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: FWFSLIVSWRSPGEWASWLGVTG*GRECTG
Trigger: GCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAG...CCAGGATGCCCATTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCGCCCAGTTTCAGAGTTaGGACTGGCAAGAGTATCTC +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLAQFQS*DWQEYL
Trigger: GAGATACTCTTGCCAGTCCAAACTCTGAAACTGGGC...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTGCCCAGTTTCAGAGTTaGGACTGGCAAGAGTATCTC +
Preference number: 5 (lower is better)
Translates to: RINHTLVQPELGPVYCLGAQFQS*DWQEYL
Trigger: GAGATACTCTTGCCAGTCCAAACTCTGAAACTGGGC...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGCGGGAGCGCTCCATGTaGCGGAGGCTGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: FPSQRIILFPRHQIALRKRERSM*RRLISR
Trigger: CCTAGAGATCAGCCTCCGCAACATGGAGCGCTCCCG...CTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTAGTCCAGCCTGAGTaGGGGCCAGTCTATTGCCTG +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGLVQPE*GPVYCL
Trigger: CAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCCAGTCATCACACTCCTaGACCGAGCTATTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLQSSHS*TELFSQ
Trigger: CTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACTG...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409202.8
CDS-3UTR CAA 90 bp CCACTGAACTTCTCTGGACTGTATTTGAGTCTCTCTTTCAGAGTGGGCTTCAGTCTAAAACTCCCCAAATaGCCACCCGAGAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLNFSGLYLSLSFRVGFSLKLPK*PPESRP
Trigger: AGGCCTGCTCTCGGGTGGCAATTTGGGGAGTTTTAG...ACTGAAGCCCACTCTGAAAGAGAGACTCAAATACAGTCCAGAGAAGTTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS GCA 90 bp CCCATGTGCCAGCAAGGAGACCCTGGGACAGAATTGGTGTATCTGTaGAGAAACAACACTTTGGCAGTCATTCCTGTTCCTGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: PMCQQGDPGTELVYL*RNNTLAVIPVPVVL
Trigger: AAGAACTACAGGAACAGGAATGACTGCCAAAGTGTTGTTTCTGCACAGATACACCAATTCTGTCCCAGGGTCTCCTTGCTGGCACATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463483.5
CDS CCA 90 bp CATTTACCAGTAAATGAGCCTGCCCATGTGCCAGCAAGGAGACCCTaGGACAGAATTGGTGTATCTGTGCAGAAACAACACTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: HLPVNEPAHVPARRP*DRIGVSVQKQHFGS
Trigger: ACTGCCAAAGTGTTGTTTCTGCACAGATACACCAATTCTGTCCCAGGGTCTCCTTGCTGGCACATGGGCAGGCTCATTTACTGGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463483.5
CDS-3UTR CAA 90 bp ATTGCCTGGGTCCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATATCACAGTAGCCAGGTaGTCCACACTCATCTTGTTA +
Preference number: 5 (lower is better)
Translates to: IAWVLRCAASNVFTGRGHITVAR*STLILL
Trigger: TAACAAGATGAGTGTGGACAACCTGGCTACTGTGAT...ATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGGACCCAGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAGCCACTGGAGCTTTCTaGGGGTCATTTTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRATGAF*GSFFWA
Trigger: TGCCCAGAAAAATGACCCCAAGAAAGCTCCAGTGGC...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATGTCCGGTGGGGCTGGTaGTATCAGAGTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDVRWGW*YQSRLS
Trigger: TGACAAGCGACTCTGATACAACCAGCCCCACCGGAC...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGTTTTCCCTGGGTACTTaGCTGCTGTCCTCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGFSLGT*LLSSGN
Trigger: GTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAA...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp AGAATTAATCACACCTTAGTCCAGCCTGAGTTGGGGCCAGTCTATTGCCTGGGTTTGGGAGTCAGAAAGTaGGCGCAAGTCTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: RINHTLVQPELGPVYCLGLGVRK*AQVLRH
Trigger: ATGTCTCAAGACTTGCGCCAACTTTCTGACTCCCAA...ACCCAGGCAATAGACTGGCCCCAACTCAGGCTGGACTAAGGTGTGATTAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGACTTGGAGTCACAGGCTaGGGAAGAGAGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SFPSQRIILFPRHQIALRLGVTG*GRECTG
Trigger: GCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAG...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGCAAGAGTATCTCCCTaGGAGTCACAGGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGARVSP*ESQAWE
Trigger: TTCCCAAGCCTGTGACTCCAAGGGAGATACTCTTGC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TTGAATACAGCGATGGATGGTCAGAGATGTCCACACACATCTCTGCTCACCCTCTTCTCCAGTTCTTCATaGAGCCTCACCACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LNTAMDGQRCPHTSLLTLFSSSS*SLTTLA
Trigger: GGCTAAAGTGGTGAGGCTCAATGAAGAACTGGAGAA...GAGGGTGAGCAGAGATGTGTGTGGACATCTCTGACCATCCATCGCTGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAAGAAAGGGGCCAGAGTaGGGCCTCTCTGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGERKGPE*GLSGAV
Trigger: GACAGCCCCAGAGAGGCCCAACTCTGGCCCCTTTCT...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGDRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGAATTTTCGACAGGGGTATATCCTaGGACTTGGGGAAGAGGACT +
Preference number: 5 (lower is better)
Translates to: VSWVSRKPVFSGRSPRIFDRGIS*DLGKRT
Trigger: AGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTC...GAAAATTCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGTCCGGTGGGGCTGGTaGTATCAGAGTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKVRWGW*YQSRLS
Trigger: TGACAAGCGACTCTGATACAACCAGCCCCACCGGAC...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGTTTTCCCTGGGTACTTaGCTGCTGTCCTCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGFSLGT*LLSSGN
Trigger: GTTTCCGGAGGACAGCAGCAAAGTACCCAGGGAAAA...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGAAGTTGGCGCAAGTCTaGAGACATCGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGKLAQV*RHRSPV
Trigger: CACAGGAGAACGATGTCTCAAGACTTGCGCCAACTT...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAGTAGGTGGAAGTCCGTaGGGAGTCAGAAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SFPSQRIILFPRHQIALRVGGSP*GVRKLA
Trigger: CGCCAACTTTCTGACTCCCAACGGACTTCCACCTAC...TCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCAAATGTCCTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATGTAGGTGGAAGTCCGTaGGGAGTCAGAAAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: PSNVLSLSENNFVSPSSDVGGSP*GVRKLA
Trigger: CGCCAACTTTCTGACTCCCAACGGACTTCCACCTAC...ATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAGGACATTTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CTTTCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAACTTGGAGTCACAGGCTaGGGAAGAGAGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LSLSENNFVSPSSDSTEKLGVTG*GRECTG
Trigger: GCCAGTGCACTCTCTTCCCAAGCCTGTGACTCCAAG...TTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGGCCCAGTTTCAGAGTTaGGACTGGCAAGAGTATCTC +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGAQFQS*DWQEYL
Trigger: GAGATACTCTTGCCAGTCCAAACTCTGAAACTGGGC...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp CCTGAGATGTGCTGCCTCAAATGTCTTCACTGGACGTGGTCATGCCTGAGACCAGGTTCCTTCATGGATTaGACAAATTCCTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: PEMCCLKCLHWTWSCLRPGSFMD*TNSLTS
Trigger: AGAAGTCAAGGAATTTGTCAAATCCATGAAGGAACC...TGGTCTCAGGCATGACCACGTCCAGTGAAGACATTTGAGGCAGCACATCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGAGGCTTGAGGCTGATTaGCCAACGTGTCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGRLEAD*PTCLLL
Trigger: AAGGAGGAGACACGTTGGCAAATCAGCCTCAAGCCT...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CAA 90 bp TCCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCCTCCACTTTCAGGTaGAAATCCCAGTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SLSENNFVSPSSDSTEKGASTFR*KSQFLG
Trigger: GCCAAGGAACTGGGATTTCAACCTGAAAGTGGAGGC...CCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCAGTCATCACACTCCTaGACCGAGCTATTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGQSSHS*TELFSQ
Trigger: CTGCGAAAATAGCTCGGTCAAGGAGTGTGATGACTG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409202.8
ENST00000467265.5
CDS-3UTR CAA 90 bp AATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCAGATCAGTGAGGACCTCATaGCTCAGTCACTGGGTGATT +
Preference number: 5 (lower is better)
Translates to: NHVSWVSRKPVFSGRSPRSVRTS*LSHWVI
Trigger: AATCACCCAGTGACTGAGCAATGAGGTCCTCACTGA...TCTGGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS TCA 90 bp CCCAGTTCCTTGGCAATTTTAGGGACATTTTGCTTCCAGTTTAAGTaGGTAGTTAGTGAAGCGGTGAGTCTGTCACAGTTTGCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PSSLAILGTFCFQFK*VVSEAVSLSQFAPF
Trigger: GAAGGGCGCAAACTGTGACAGACTCACCGCTTCACTAACTACTCACTTAAACTGGAAGCAAAATGTCCCTAAAATTGCCAAGGAACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409202.8
ENST00000456116.6
ENST00000463061.1
ENST00000467265.5
ENST00000485573.5
ENST00000488795.1
CDS-3UTR CAA 90 bp AGGAATCACGTTTCATGGGTTAGCAGGAAACCAGTTTTCTCTGGACGTTCACCCTTGTCCACACTCATCTaGTTAACAGCACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RNHVSWVSRKPVFSGRSPLSTLI*LTAQFS
Trigger: GCTGAACTGTGCTGTTAACAAGATGAGTGTGGACAA...GGGTGAACGTCCAGAGAAAACTGGTTTCCTGCTAACCCATGAAACGTGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497079.5
CDS-3UTR CAA 90 bp CCCTCTCAGAGAATAATTTTGTTTCCCCGTCATCAGATAGCACTGAGAAAGGGGCATAGTCATCACTCTTaGGATCTGAGGAGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PSQRIILFPRHQIALRKGHSHHS*DLRSPS
Trigger: AGAGGGACTCCTCAGATCCAAAGAGTGATGACTATG...CCCCTTTCTCAGTGCTATCTGATGACGGGGAAACAAAATTATTCTCTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000409030.7
ENST00000409202.8
ENST00000409220.5
ENST00000467265.5
ENST00000479844.1
ENST00000497259.5
CDS-3UTR CAA 90 bp GTTTGTTGCTTGTTCTGGTTTAGTCTAATAGTAAGTTGGAGAAGTCCTGGAGAAGTCCGGTGGGGCTGGTaGTATCAGAGTCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: VCCLFWFSLIVSWRSPGEVRWGW*YQSRLS
Trigger: TGACAAGCGACTCTGATACAACCAGCCCCACCGGAC...TTCTCCAGGACTTCTCCAACTTACTATTAGACTAAACCAGAACAAGCAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409030.7