RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP23 (Homo sapiens)

Ensembl gene IDs: ENSG00000273780, ENSG00000275832

Ensembl transcript IDs: ENST00000610551.2, ENST00000614693.1, ENST00000618942.1, ENST00000620417.4, ENST00000622683.5, ENST00000631799.1, ENST00000632947.1, ENST00000633445.1, ENST00000634129.1

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTaGGGAGAAGAGGGCGCTGGGTCCTGTCCATCCTGCAGGAACAGC +
Preference number: 1 (lower is better)
Translates to: VCGGWPGDWKSIYSL*GEEGAGSCPSCRNS
Trigger: GCTGTTCCTGCAGGATGGACAGGACCCAGCGCCCTCTTCTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR TCA 90 bp ATAGACGTGGCAGCGGGTTCACCACCTACCTGGGCTTCCCTGGAATaGGTGAGGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATT +
Preference number: 1 (lower is better)
Translates to: IDVAAGSPPTWASLE*VRVCGGWPGDWKSI
Trigger: AATAGACTTCCAATCACCAGGCCAGCCCCCACACACCCTCACTCATTCCAGGGAAGCCCAGGTAGGTGGTGAACCCGCTGCCACGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGCGCCCCCTCCTCTTCTaGTCATCACCTCTGGAACCC +
Preference number: 2 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGRPLLF*SSPLEP
Trigger: GGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCG...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDRTAPS*GPTNPW
Trigger: CCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACG...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
3UTR-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGGACAGAAGTCGCTACTaGAAACACCTTGGGACAATG +
Preference number: 2 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGDRSRY*KHLGTM
Trigger: CATTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTC...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCGGGCCCACGAACCCTTaGACTTGGCTGAACTACAGG +
Preference number: 2 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLGPTNP*TWLNYR
Trigger: CCTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCC...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
3UTR-3UTR TCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAAGGAGGTGCAGGCTGGTaGAGCCTCCTGGTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQGGAGW*SLLVPK
Trigger: CTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCC...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR TCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGTCCCCGCTTACAAGCTaGGGTGGGAGGGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: GCVGAGLVIGSLFTACGESPLTS*GGRAEE
Trigger: TTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGA...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGCCTTCTCCTCTGCCCTaGCAGTTCCAGCACACCAAC +
Preference number: 2 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEPSPLP*QFQHTN
Trigger: GTTGGTGTGCTGGAACTGGCAGGGCAGAGGAGAAGG...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTTATCGGGCGCATGTGTaGAGGGACACAGACCCCAGC +
Preference number: 2 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPYRAHV*RDTDPS
Trigger: GCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATA...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGCTGGTGAAGCCTCCTaGTTCCAAAGGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNAGEAS*FQRGSR
Trigger: CCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGAGAGACACTGCCTGCTaGGCCCTCCACCCACACCAT +
Preference number: 2 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMRDTAC*ALHPHH
Trigger: ATGGTGTGGGTGGAGGGCGCAGCAGGCAGTGTCTCT...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAACCTTCTCCTCTGCCCTaGCAGTTCCAGCACACCAAC +
Preference number: 2 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQPSPLP*QFQHTN
Trigger: GTTGGTGTGCTGGAACTGGCAGGGCAGAGGAGAAGG...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGCGCCCCCTCCTCTTCTaGTCATCACCTCTGGAACCC +
Preference number: 2 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVRPLLF*SSPLEP
Trigger: GGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCG...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCCTTGGGACAATGACTaGACACACAAGCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPPWDND*THKPLP
Trigger: GGGGAGGGGCTTGTGTGTGCAGTCATTGTCCCAAGG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR TCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGTCCCCGCTTACAAGCTaGGGTGGGAGGGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVSPLTS*GGRAEE
Trigger: TTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGA...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTGCTGGTGAAGCCTCCTaGTTCCAAAGGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPAGEAS*FQRGSR
Trigger: CCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGC...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTACAGGCAGCTGCCCGTaGTTAAAGCGCTTAGAGGGT +
Preference number: 2 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPTGSCP*LKRLEG
Trigger: ACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR CAA 90 bp TGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGTaGGGGAGTAACCCTGGTGAGGGTTTCAGTCCTGCCTCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: CPWLKRLEGDSGKRM*GSNPGEGFSPASLE
Trigger: TTCCAAGGAGGCAGGACTGAAACCCTCACCAGGGTTACTCCCCAACATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR TCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGAAAGCGCTTAGAGGGTaGCTCAGGCAAAAGGATGTT +
Preference number: 2 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEKALRG*LRQKDV
Trigger: AACATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTT...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCTACTGGAAACACCTTaGGACAATGACTGCACACAC +
Preference number: 2 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPLLETP*DNDCTH
Trigger: GTGTGTGCAGTCATTGTCCCAAGGTGTTTCCAGTAG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR TCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCAGACAGCAGGGGTGTTaGCTATCCCTCCTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: QEILVVAREVCQGHSERSRQQGC*LSLLLR
Trigger: CCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCT...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCTCTGCTCATCACCTCTaGAACCCCCTTCCATTCAAT +
Preference number: 2 (lower is better)
Translates to: QEILVVAREVCQGHSERSSAHHL*NPLPFN
Trigger: ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGA...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CCA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCTCTGCTCATCACCTCTaGAACCCCCTTCCATTCAAT +
Preference number: 2 (lower is better)
Translates to: QKASITQDLSFSLKLRGSSAHHL*NPLPFN
Trigger: ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGA...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR GCA 90 bp TTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTATTCCAGGACTGTCTGACTaGAGAGTCTGTGCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: FLLLALGSPKTLKDICFIPGLSD*RVCASN
Trigger: GTTAGAAGCACAGACTCTGCAGTCAGACAGTCCTGG...AATAAAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
3UTR-3UTR TCA 90 bp TTATTTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTGTGCTTCTAACTACTaGGTGACATTGCCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: LFPSACFRLSKDLKGYLFCASNY*VTLPPS
Trigger: GCTAGGAGGCAATGTCACTCAGTAGTTAGAAGCACA...AAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
3UTR-3UTR TCA 90 bp TTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTATTTGTGCTTCTAACTACTaGGTGACATTGCCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: FLLLALGSPKTLKDICFICASNY*VTLPPS
Trigger: GCTAGGAGGCAATGTCACTCAGTAGTTAGAAGCACA...AATAAAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
3UTR-3UTR CCA 90 bp TTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTATTCAAACTACTAAATGGTaGAGCCAGAACTCAAACCCA +
Preference number: 2 (lower is better)
Translates to: FLLLALGSPKTLKDICFIQTTKW*SQNSNP
Trigger: TGGGTTTGAGTTCTGGCTCCACCATTTAGTAGTTTG...AATAAAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
3UTR GCA 72 bp ACAGAAAGGCTCAGAAGGACCTATCGGGCGCATGTGTaGAGGGACACAGACCCCAGCAGCCCACGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: TERLRRTYRAHV*RDTDPSSPRPL
Trigger: GAGGGGGCGTGGGCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCTTTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CAA 90 bp GACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGCCCACGAACCCTaGGACTTGGCTGAACTACAG +
Preference number: 3 (lower is better)
Translates to: DGRDEGDRQHLPGVRLLLGAHEP*DLAELQ
Trigger: CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCC...AAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
3UTR CCA 72 bp AGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGGACTTGGCTGAACTAC +
Preference number: 3 (lower is better)
Translates to: RSPASPGRTAPS*GPTNPWTWLNY
Trigger: GTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
3UTR CCA 72 bp GGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTaGGGAGAAGAGGGCGCTGGGTCCTGTCCATCCTGC +
Preference number: 3 (lower is better)
Translates to: GWPGDWKSIYSL*GEEGAGSCPSC
Trigger: GCAGGATGGACAGGACCCAGCGCCCTCTTCTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR-3UTR CAA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGGAGACAGCAGGGGTGTaGACTATCCCTCCTCCTAAG +
Preference number: 3 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEETAGV*TIPPPK
Trigger: CTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTC...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR TCA 72 bp ACAGCCCAGCTCAGACCCCATAAATCAGTGTGTGAGTaGCAGAGAGACAGCAGGGGTGTTGACTATCCCTCC +
Preference number: 3 (lower is better)
Translates to: TAQLRPHKSVCE*QRDSRGVDYPS
Trigger: GGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTCACTCACACACTGATTTATGGGGTCTGAGCTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR TCA 72 bp GGACTGTCTGACTGCAGAGTCTGTGCTTCTAACTACTaGGTGACATTGCCTCCTAGCCACATAACTCCCAGG +
Preference number: 3 (lower is better)
Translates to: GLSDCRVCASNY*VTLPPSHITPR
Trigger: CCTGGGAGTTATGTGGCTAGGAGGCAATGTCACTCAGTAGTTAGAAGCACAGACTCTGCAGTCAGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
3UTR-3UTR CAA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCTCAGGCAAAAGGATGTaGGGGAGTAACCCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: QEILVVAREVCQGHSERSSGKRM*GSNPGE
Trigger: CTCACCAGGGTTACTCCCCAACATCCTTTTGCCTGA...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVLAGVS*TLRPVG
Trigger: CCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAG...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGAGTCGTCGTCGGTGCTaGTGCCCAGCCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVSRRRC*CPAPAP
Trigger: AGGCGCGGGGGCTGGGCAGCAGCACCGACGACGACT...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGGGCCTCTGGTGGGAATaGCGCAGGGGACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVGLWWE*RRGLGQ
Trigger: CTGGCCCAGTCCCCTGCGTCATTCCCACCAGAGGCC...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp TGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTTTGGGCAGGCGGGGGTaGGGGCAGACGAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: CGPRPRLVRLLLRVVVGALGRRG*GQTNAG
Trigger: CCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAA...AGCACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGTCCTTCAGGCTGCAGTaGACGGCCGACTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVSFRLQ*TADSGG
Trigger: CCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGA...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGTTGGGCAGGCGGGGGTaGGGGCAGACGAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWLGRRG*GQTNAG
Trigger: CCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAA...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGGGCTTGTGCGCCTCCTaGTCCGAGTCGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVGLCAS*SESSSV
Trigger: CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCC...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTCCTCCAACCGGTCCTaGGAGGCGCTGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPSSNRS*EALRAR
Trigger: CCGGGCCCGCAGCGCCTCCCAGGACCGGTTGGAGGA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTGGCAGGTCCCGAGTTaGGCAGGCGGGGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPWQVPS*AGGGAG
Trigger: GCCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTCCGGCCGTACAACCCTaGGTGGCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGPRPRLVRLLLRVVVGAPAVQP*VARRPL
Trigger: CAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGG...AGCACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGGGCCTCTGGTGGGAATaGCGCAGGGGACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAGLWWE*RRGLGQ
Trigger: CTGGCCCAGTCCCCTGCGTCATTCCCACCAGAGGCC...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCCAAGGACCCGTCGGTaGAGAAGCTCCGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVPRTRR*RSSGAS
Trigger: GGATGCTCCGGAGCTTCTTCACCGACGGGTCCTTGG...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGCCAGCCGGTCTCCTGTaGGAAGCCCCGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAPAGLL*EAPPYG
Trigger: CCCATAGGGCGGGGCTTCGCACAGGAGACCGGCTGG...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTGCCCCTGGCCCCAGTaGCTCGGCAGAACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPCPWPQ*LGRTGG
Trigger: GCCACCCGTTCTGCCGAGGCACTGGGGCCAGGGGCA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGAGGTCATCCAGGCCCTaGAGGCCAGACGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAARSSRP*RPDGGG
Trigger: CCCACCCCCGTCTGGCCTGCAGGGCCTGGATGACCT...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCAAGGGGCCACCTTCCTaGCCAGGCGTTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGKGPPS*PGVPLA
Trigger: GGCGAGGGGAACGCCTGGGCAGGAAGGTGGCCCCTT...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGAAGGGGCCACCTTCCTaGCCAGGCGTTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAKGPPS*PGVPLA
Trigger: GGCGAGGGGAACGCCTGGGCAGGAAGGTGGCCCCTT...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCAGTCGTCGTCGGTGCTaGTGCCCAGCCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSFLGAHEPSRRRC*CPAPAP
Trigger: AGGCGCGGGGGCTGGGCAGCAGCACCGACGACGACT...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGGCAGCGACTCCTGGCTaGTGGACGACGCCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPAATPG*WTTPSR
Trigger: CCGGCTCGGCGTCGTCCAGCAGCCAGGAGTCGCTGC...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVHGRLG*VHDEVA
Trigger: CGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTG...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCTCCTCCAACCGGTCCTaGGAGGCGCTGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRSSNRS*EALRAR
Trigger: CCGGGCCCGCAGCGCCTCCCAGGACCGGTTGGAGGA...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCAAGCATCCTGGGAGGTaGAGCAGGGCCACGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGKHPGR*SRATGG
Trigger: CCCGCCCGTGGCCCTGCTCCACCTCCCAGGATGCTT...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTGCACCACCACGGTGTaGCGGCGCCAGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPCTTTV*RRQLLR
Trigger: CCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVAQVVI*ASSVPA
Trigger: GGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGC...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRLAGVS*TLRPVG
Trigger: CCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAG...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTCTGAGCGAGCTCGGTaGCAGCCCTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPSERAR*QPSWPS
Trigger: GCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCAGGTCATCCAGGCCCTaGAGGCCAGACGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSFLGAHEPRSSRP*RPDGGG
Trigger: CCCACCCCCGTCTGGCCTGCAGGGCCTGGATGACCT...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCGCTCCAGGGCCCGGGTaGTGGGTTCCGGCCGTACAA +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSFLGAHEPAPGPG*WVPAVQ
Trigger: TTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGC...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGCCGAGTCGTCGTCGGTaGTGCTGCCCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGPSRRR*CCPAPA
Trigger: CGCGGGGGCTGGGCAGCAGCACCGACGACGACTCGG...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCCCGAGTCGTCGTCGGTaGTGCTGCCCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGPSRRR*CCPAPA
Trigger: CGCGGGGGCTGGGCAGCAGCACCGACGACGACTCGG...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCCAGGGCATGAGGTGGTaGGAGCTGAAGGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGQGMRW*ELKDGR
Trigger: CCGGCCGTCCTTCAGCTCGCACCACCTCATGCCCTG...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGTCAGTCAGCGGGCTCTaGACCACCACGGTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGSVSGL*TTTVWR
Trigger: CCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGA...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAAGGCACGGGCAGCAGGTaGCACACGGAGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: KEIASISRAYGSFLGAHEGTGSR*HTEPRV
Trigger: GACCCGGGGCTCCGTGTGCCACCTGCTGCCCGTGCC...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGGAAGGAGAGCGCATaGAGGAGGCCGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDRKESA*RRPVRR
Trigger: GCGCCGGACCGGCCTCCTCCATGCGCTCTCCTTCCG...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGTCGCCCACTGGCCTCTaGCTCTGGGGACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGSPTGL*LWGLVT
Trigger: GGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGA...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCCCGCTCAAAGCGGGGTaGCACCAGTGCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGPLKAG*HQCPWP
Trigger: GGGCCAGGGGCACTGGTGTCACCCCGCTTTGAGCGG...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGGGCCTCTGGTGGGAATaGCGCAGGGGACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLGLWWE*RRGLGQ
Trigger: CTGGCCCAGTCCCCTGCGTCATTCCCACCAGAGGCC...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGCCAAGGACCCGTCGGTaGAGAAGCTCCGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWPRTRR*RSSGAS
Trigger: GGATGCTCCGGAGCTTCTTCACCGACGGGTCCTTGG...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCTGCCCCTGGCCCCAGTaGCTCGGCAGAACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGACPWPQ*LGRTGG
Trigger: GCCACCCGTTCTGCCGAGGCACTGGGGCCAGGGGCA...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGTTGGGCAGGCGGGGGTaGGGGCAGACGAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGLGRRG*GQTNAG
Trigger: CCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAA...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCGCTCCAGGGCCCGGGTaGTGGGTTCCGGCCGTACAA +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRAPGPG*WVPAVQ
Trigger: TTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGC...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGCACGGGCAGCAGGTaGCACACGGAGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TAEMKEIASISRAYGSFLGTGSR*HTEPRV
Trigger: GACCCGGGGCTCCGTGTGCCACCTGCTGCCCGTGCC...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGAAGAGTTGTCCAGGTaGGCACGGGCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWEELSR*ARAAGG
Trigger: GCCACCTGCTGCCCGTGCCCACCTGGACAACTCTTC...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCAAGCATCCTGGGAGGTaGAGCAGGGCCACGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRKHPGR*SRATGG
Trigger: CCCGCCCGTGGCCCTGCTCCACCTCCCAGGATGCTT...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATTGGCAGGTCCCGAGTTaGGCAGGCGGGGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHWQVPS*AGGGAG
Trigger: GCCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCA...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTTGGCAGGTCCCGAGTTaGGCAGGCGGGGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VDGRDEGDRQHLPGVRLLWQVPS*AGGGAG
Trigger: GCCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCA...AAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTGGGGCCTGGGGCCCTaGCAGGTCCCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGWGLGP*QVPSWA
Trigger: TGCCCAACTCGGGACCTGCCAGGGCCCCAGGCCCCA...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCCGGCCGTACAACCCTaGGTGGCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDPAVQP*VARRPL
Trigger: CAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGG...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTCCAGAGAGTCTTCGGTaGTGGCCAAAGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CGPRPRLVRLLLRVVVGAPESLR*WPKGPP
Trigger: AGGTGGCCCCTTTGGCCACCACCGAAGACTCTCTGG...AGCACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGGCTGGGTATGCGGTTTaGCAGGCGCCGCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPAGYAV*QAPQNP
Trigger: CGGGTTCTGCGGCGCCTGCCAAACCGCATACCCAGC...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGCGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAARTAPS*GPTNPW
Trigger: CCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACG...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGCTTCCTCCTTCAGGCTaGAGTGCACGGCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPLPPSG*SARPTR
Trigger: CCGAGTCGGCCGTGCACTGCAGCCTGAAGGAGGAAG...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCCCAGCCGGTCTCCTGTaGGAAGCCCCGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGPAGLL*EAPPYG
Trigger: CCCATAGGGCGGGGCTTCGCACAGGAGACCGGCTGG...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCTGCCCCTGGCCCCAGTaGCTCGGCAGAACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSCPWPQ*LGRTGG
Trigger: GCCACCCGTTCTGCCGAGGCACTGGGGCCAGGGGCA...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCCCGTCGGGGGCTTCTaGCTCAGGACCACCTCATCG +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDPVGGF*LRTTSS
Trigger: CGATGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGG...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCAAGGGGCCACCTTCCTaGCCAGGCGTTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGKGPPS*PGVPLA
Trigger: GGCGAGGGGAACGCCTGGGCAGGAAGGTGGCCCCTT...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCAAGGGGCCACCTTCCTaGCCAGGCGTTCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGAKGPPS*PGVPLA
Trigger: GGCGAGGGGAACGCCTGGGCAGGAAGGTGGCCCCTT...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGCGCCCCCTCCTCTTCTaGTCATCACCTCTGGAACCC +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWRPLLF*SSPLEP
Trigger: GGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCG...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGCAAAGATGGTGTCCATaGGCTCCAGGCGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAQRWCP*APGGTG
Trigger: CCCGGTACCGCCTGGAGCCCATGGACACCATCTTTG...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCGAAGCCCCGCCCTATaGGCAGGGCCGTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRRSPAL*AGPSSF
Trigger: GAAGGAAGACGGCCCTGCCCATAGGGCGGGGCTTCG...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATGACTCCGGGGGTCACTaGGCAGTGCTGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDDSGGH*AVLRWA
Trigger: AGCCCACCTCAGCACTGCCCAGTGACCCCCGGAGTC...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGGACTCCGGGGGTCACTaGGCAGTGCTGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLDSGGH*AVLRWA
Trigger: AGCCCACCTCAGCACTGCCCAGTGACCCCCGGAGTC...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCGGCACTCCAGTCTGCTaGGGGGCACCCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LTAEMKEIASISRAYGSFGTPVC*GAPGCQ
Trigger: CTGGCAGCCGGGTGCCCCCCAGCAGACTGGAGTGCC...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGGCCCGGCGGGGTACCTaGTTTGACAGCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPARRGT*FDSQCD
Trigger: GTCACACTGGCTGTCAAACCAGGTACCCCGCCGGGC...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCTCCTCCAACCGGTCCTaGGAGGCGCTGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLSSNRS*EALRAR
Trigger: CCGGGCCCGCAGCGCCTCCCAGGACCGGTTGGAGGA...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATTGGGGCCTGGGGCCCTaGCAGGTCCCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHWGLGP*QVPSWA
Trigger: TGCCCAACTCGGGACCTGCCAGGGCCCCAGGCCCCA...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTCGGAAGGAGAGCGCATaGAGGAGGCCGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: DGRDEGDRQHLPGVRLLLRKESA*RRPVRR
Trigger: GCGCCGGACCGGCCTCCTCCATGCGCTCTCCTTCCG...AAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATTCGCCCACTGGCCTCTaGCTCTGGGGACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDSPTGL*LWGLVT
Trigger: GGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGA...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCTCGCCCACTGGCCTCTaGCTCTGGGGACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRSPTGL*LWGLVT
Trigger: GGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGA...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGAGAGTCTTCGGTGGTaGCCAAAGGGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGESLRW*PKGPPS
Trigger: GGAAGGTGGCCCCTTTGGCCACCACCGAAGACTCTC...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCCGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSFLGAHEPRTAPS*GPTNPW
Trigger: CCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACG...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGACACGCTGCGGTCCATaGTGGACAGGGTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWTRCGP*WTGWSS
Trigger: GCTACTCCACCCTGTCCACCATGGACCGCAGCGTGT...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGCCTGCCTCCTTGGAATaGCCCCAACCCCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGPASLE*PQPPSL
Trigger: CAGAGAAGGGGGTTGGGGCCATTCCAAGGAGGCAGG...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCCGCTCAAAGCGGGGTaGCACCAGTGCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQPLKAG*HQCPWP
Trigger: GGGCCAGGGGCACTGGTGTCACCCCGCTTTGAGCGG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGGGTCCGGCGCTGGAATaGTGGGCTGTAGCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLGPALE*WAVAPV
Trigger: TACCGGAGCTACAGCCCATCATTCCAGCGCCGGACC...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGTGGACTCCAGGCTGCTaGGTCCGGAGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGWTPGC*VRSPCC
Trigger: ACAACAAGGACTCCGGACTCAGCAGCCTGGAGTCCA...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGTCCTTCAGGCTGCAGTaGACGGCCGACTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRSFRLQ*TADSGG
Trigger: CCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGA...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGGTGGCTCTGGGATGCTaGGGGCCTCTCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPVALGC*GPLQNT
Trigger: CGTATTCTGGAGAGGCCCGCAGCATCCCAGAGCCAC...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGCAGTGTGACAAGGCCTaGTGGCACTCCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGQCDKA*WHSSLL
Trigger: CAGCAGACTGGAGTGCCAGCAGGCCTTGTCACACTG...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTTCTGAGCGAGCTCGGTaGCAGCCCTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VDGRDEGDRQHLPGVRLLSERAR*QPSWPS
Trigger: GCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGA...AAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTTCTGAGCGAGCTCGGTaGCAGCCCTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DGRDEGDRQHLPGVRLLLSERAR*QPSWPS
Trigger: GCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGA...AAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCTGCCCCTGGCCCCAGTaGCTCGGCAGAACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLCPWPQ*LGRTGG
Trigger: GCCACCCGTTCTGCCGAGGCACTGGGGCCAGGGGCA...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGGSAEP*GPSGAS
Trigger: AGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCC...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGATCACATTGAGGTCTTaGCAGCGCTCATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVAPAPGLCASCSESSSVITLRS*QRSSCR
Trigger: CCTGCAGGATGAGCGCTGGCAAGACCTCAATGTGAT...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGAGGTGGGCTTCTGTGTaGCTGGGCTGTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGRWASV*LGCGRN
Trigger: GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCT...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCAGAGCACCCATCTCTTaGGCCCAGTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSFLGAHEPRAPIS*AQWQLW
Trigger: CCACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCT...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCGGCACTCCAGTCTGCTaGGGGGCACCCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLGTPVC*GAPGCQ
Trigger: CTGGCAGCCGGGTGCCCCCCAGCAGACTGGAGTGCC...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCGCCCGGCGGGGTACCTaGTTTGACAGCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRARRGT*FDSQCD
Trigger: GTCACACTGGCTGTCAAACCAGGTACCCCGCCGGGC...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGAAGCATCCTGGGAGGTaGAGCAGGGCCACGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TAEMKEIASISRAYGSFLKHPGR*SRATGG
Trigger: CCCGCCCGTGGCCCTGCTCCACCTCCCAGGATGCTT...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGCGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: TAEMKEIASISRAYGSFLRADER*EAQPHR
Trigger: GCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCG...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGGCTGGGTATGCGGTTTaGCAGGCGCCGCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRAGYAV*QAPQNP
Trigger: CGGGTTCTGCGGCGCCTGCCAAACCGCATACCCAGC...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCCCATGGTGGACAGGGTaGAGTAGCCCGACACAATGG +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGPWWTG*SSPTQW
Trigger: CCATTGTGTCGGGCTACTCCACCCTGTCCACCATGG...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGCCATGGTGGACAGGGTaGAGTAGCCCGACACAATGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAPWWTG*SSPTQW
Trigger: CCATTGTGTCGGGCTACTCCACCCTGTCCACCATGG...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGGCTGGTGAAGCCTCCTaGTTCCAAAGGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAAAGEAS*FQRGSR
Trigger: CCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGC...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCTCAGTCCTGCCTCCTTaGAATGGCCCCAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: GEASWFQRGSREGWRPSGSVLPP*NGPNPL
Trigger: AAGGGGGTTGGGGCCATTCCAAGGAGGCAGGACTGA...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGCCACCAAAAACTGTCTaGGGAACAGGCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWPPKTV*GTGSCP
Trigger: CGGGCAGCTGCCTGTTCCCCAGACAGTTTTTGGTGG...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATCCGCTCAAAGCGGGGTaGCACCAGTGCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNPLKAG*HQCPWP
Trigger: GGGCCAGGGGCACTGGTGTCACCCCGCTTTGAGCGG...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCCAAGGACCCGTCGGTaGAGAAGCTCCGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRPRTRR*RSSGAS
Trigger: GGATGCTCCGGAGCTTCTTCACCGACGGGTCCTTGG...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCCAGCCGGTCTCCTGTaGGAAGCCCCGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQPAGLL*EAPPYG
Trigger: CCCATAGGGCGGGGCTTCGCACAGGAGACCGGCTGG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCAGGTCATCCAGGCCCTaGAGGCCAGACGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLRSSRP*RPDGGG
Trigger: CCCACCCCCGTCTGGCCTGCAGGGCCTGGATGACCT...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSGSAEP*GPSGAS
Trigger: AGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCC...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VDGRDEGDRQHLPGVRLLGSAEP*GPSGAS
Trigger: AGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCC...AAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATAGTCGTCGTCGGTGCTaGTGCCCAGCCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNSRRRC*CPAPAP
Trigger: AGGCGCGGGGGCTGGGCAGCAGCACCGACGACGACT...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCCGAGTCGTCGTCGGTaGTGCTGCCCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPPSRRR*CCPAPA
Trigger: CGCGGGGGCTGGGCAGCAGCACCGACGACGACTCGG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAACCGAGTCGTCGTCGGTaGTGCTGCCCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQPSRRR*CCPAPA
Trigger: CGCGGGGGCTGGGCAGCAGCACCGACGACGACTCGG...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCGGCTTGTGCGCCTCCTaGTCCGAGTCGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LTAEMKEIASISRAYGSFGLCAS*SESSSV
Trigger: CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCC...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGCCTTGGGACAATGACTaGACACACAAGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPPWDND*THKPLP
Trigger: GGGGAGGGGCTTGTGTGTGCAGTCATTGTCCCAAGG...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCACTCCATTCATCGGGTaGCAGCGGCGGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSTPFIG*QRRLCG
Trigger: GCCGCAGAGCCGCCGCTGCCACCCGATGAATGGAGT...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610551.2
CDS-3UTR CCA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAGAGCACCCATCTCTTaGGCCCAGTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLRAPIS*AQWQLW
Trigger: CCACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCT...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCGACTCCGGGGGTCACTaGGCAGTGCTGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSDSGGH*AVLRWA
Trigger: AGCCCACCTCAGCACTGCCCAGTGACCCCCGGAGTC...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGGAAGAGTTGTCCAGGTaGGCACGGGCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVREELSR*ARAAGG
Trigger: GCCACCTGCTGCCCGTGCCCACCTGGACAACTCTTC...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCTGGCTCAAAGCATCCTaGGAGGTGGAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRWLKAS*EVEQGH
Trigger: GTGGCCCTGCTCCACCTCCCAGGATGCTTTGAGCCA...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGCGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGRADER*EAQPHR
Trigger: GCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCG...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQRADER*EAQPHR
Trigger: GCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAATGGCAGGTCCCGAGTTaGGCAGGCGGGGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQWQVPS*AGGGAG
Trigger: GCCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCA...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCCGTACAACCCTGGGTaGCTCGGAGGCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHPYNPG*LGGLWW
Trigger: CCACCAGAGGCCTCCGAGCCACCCAGGGTTGTACGG...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGCCGGCCGTACAACCCTaGGTGGCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGPAVQP*VARRPL
Trigger: CAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGG...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGACTGGCCTCTGGCTCTaGGGACTCGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPTGLWL*GLVTKS
Trigger: GGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGT...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATGTTCCCCTCGCCCACTaGCCTCTGGCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHVPLAH*PLALGT
Trigger: AGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAAC...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCGCTGGGTATGCGGTTTaGCAGGCGCCGCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LTAEMKEIASISRAYGSFAGYAV*QAPQNP
Trigger: CGGGTTCTGCGGCGCCTGCCAAACCGCATACCCAGC...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRRTAPS*GPTNPW
Trigger: CCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACG...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCCGCTGCGGTCCATGGTaGACAGGGTGGAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSRCGPW*TGWSSP
Trigger: CGGGCTACTCCACCCTGTCCACCATGGACCGCAGCG...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTGCACCACCACGGTGTaGCGGCGCCAGCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNCTTTV*RRQLLR
Trigger: CCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCA...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGACAGGCAGCTGCCCGTaGTTAAAGCGCTTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAATGSCP*LKRLEG
Trigger: ACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGTCTATTTACAGCCTGTaGGGAGAAGAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGSIYSL*GEEGAG
Trigger: CCCAGCGCCCTCTTCTCCCCACAGGCTGTAAATAGA...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRAQVVI*ASSVPA
Trigger: GGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGC...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCCGCTCAAAGCGGGGTaGCACCAGTGCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPPLKAG*HQCPWP
Trigger: GGGCCAGGGGCACTGGTGTCACCCCGCTTTGAGCGG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATGGTCCGGCGCTGGAATaGTGGGCTGTAGCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHGPALE*WAVAPV
Trigger: TACCGGAGCTACAGCCCATCATTCCAGCGCCGGACC...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPLAGVS*TLRPVG
Trigger: CCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATGGGGATCACAGACACTaGTGCAGGCGGGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNGDHRH*CRREAA
Trigger: GGCCGCCTCCCGCCTGCATCAGTGTCTGTGATCCCC...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGTCCTTCAGGCTGCAGTaGACGGCCGACTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGSFRLQ*TADSGG
Trigger: CCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGA...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCGTGGCTCTGGGATGCTaGGGGCCTCTCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGAVALGC*GPLQNT
Trigger: CGTATTCTGGAGAGGCCCGCAGCATCCCAGAGCCAC...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCGTGGCTCTGGGATGCTaGGGGCCTCTCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGVALGC*GPLQNT
Trigger: CGTATTCTGGAGAGGCCCGCAGCATCCCAGAGCCAC...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTCTGAGCGAGCTCGGTaGCAGCCCTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNSERAR*QPSWPS
Trigger: GCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGA...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCCGTCGGGGGCTTCTaGCTCAGGACCACCTCATCG +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLPVGGF*LRTTSS
Trigger: CGATGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGG...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGCAGCACTGTCATCCTTaGTCCCTGCGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGQHCHP*SLRAGP
Trigger: AGGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTG...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGATCACATTGAGGTCTTaGCAGCGCTCATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGITLRS*QRSSCR
Trigger: CCTGCAGGATGAGCGCTGGCAAGACCTCAATGTGAT...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGACGCAGCGCCTCCATaGGCGAGGGCCGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMDAAPP*ARAGRP
Trigger: TGGCCTCCCGGCCCTCGCGCATGGAGGCGCTGCGTC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGGGGTACACGATGAAGTaGCGCAGAGTGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGGYTMK*RRVKPK
Trigger: CTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCC...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHHGRLG*VHDEVA
Trigger: CGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTG...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCGAAGCCCCGCCCTATaGGCAGGGCCGTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQRSPAL*AGPSSF
Trigger: GAAGGAAGACGGCCCTGCCCATAGGGCGGGGCTTCG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGGCACGGGCAGCAGGTaGCACACGGAGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKGTGSR*HTEPRV
Trigger: GACCCGGGGCTCCGTGTGCCACCTGCTGCCCGTGCC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAGGCACGGGCAGCAGGTaGCACACGGAGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLGTGSR*HTEPRV
Trigger: GACCCGGGGCTCCGTGTGCCACCTGCTGCCCGTGCC...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGAAGAGTTGTCCAGGTaGGCACGGGCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TAEMKEIASISRAYGSFLEELSR*ARAAGG
Trigger: GCCACCTGCTGCCCGTGCCCACCTGGACAACTCTTC...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGTCCTCCAACCGGTCCTaGGAGGCGCTGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVSSNRS*EALRAR
Trigger: CCGGGCCCGCAGCGCCTCCCAGGACCGGTTGGAGGA...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAATGGCTCAAAGCATCCTaGGAGGTGGAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KEIASISRAYGSFLGAHEWLKAS*EVEQGH
Trigger: GTGGCCCTGCTCCACCTCCCAGGATGCTTTGAGCCA...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGTGGGGCCTGGGGCCCTaGCAGGTCCCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRWGLGP*QVPSWA
Trigger: TGCCCAACTCGGGACCTGCCAGGGCCCCAGGCCCCA...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGCGGAAGGAGAGCGCATaGAGGAGGCCGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRRKESA*RRPVRR
Trigger: GCGCCGGACCGGCCTCCTCCATGCGCTCTCCTTCCG...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATCCGGCCGTACAACCCTaGGTGGCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNPAVQP*VARRPL
Trigger: CAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGG...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCGTTCCCCTCGCCCACTaGCCTCTGGCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLVPLAH*PLALGT
Trigger: AGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAAC...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCATTAAGGGGACGCGCTaGTTCTCCGTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGAIKGTR*FSVAGW
Trigger: CCAGCCAGCCACGGAGAACCAGCGCGTCCCCTTAAT...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGATTAAGGGGACGCGCTaGTTCTCCGTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGIKGTR*FSVAGW
Trigger: CCAGCCAGCCACGGAGAACCAGCGCGTCCCCTTAAT...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGTAGCCCGACACAATaGAGCGCGTGTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGSSPTQ*SACPRP
Trigger: CGGCCGCGGACACGCGCTCCATTGTGTCGGGCTACT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLLAGVS*TLRPVG
Trigger: CCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGGGGGATCACAGACACTaGTGCAGGCGGGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRGDHRH*CRREAA
Trigger: GGCCGCCTCCCGCCTGCATCAGTGTCTGTGATCCCC...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAATTGGGCAGGCGGGGGTaGGGGCAGACGAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKLGRRG*GQTNAG
Trigger: CCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAA...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCCCCGTCGGGGGCTTCTaGCTCAGGACCACCTCATCG +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAPVGGF*LRTTSS
Trigger: CGATGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGG...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGCCCGTCGGGGGCTTCTaGCTCAGGACCACCTCATCG +
Preference number: 4 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEPVGGF*LRTTSS
Trigger: CGATGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGG...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCCAGCACTGTCATCCTTaGTCCCTGCGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTAEMKEIASISRAYGSFQHCHP*SLRAGP
Trigger: AGGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTG...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGGCTTGTGCGCCTCCTaGTCCGAGTCGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNGLCAS*SESSSV
Trigger: CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGCATGTCGTCCGCCGTaGCGCGGAGCCTTAGACGCA +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAACRPP*RGALDA
Trigger: TGCGTCTAAGGCTCCGCGGCACGGCGGACGACATGC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACTCAGTCAGCGGGCTCTaGACCACCACGGTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNSVSGL*TTTVWR
Trigger: CCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGA...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAATCCTTGTTGTCACTGTaGGCCCGCGCGCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQSLLSL*ARAPAG
Trigger: GCCTGCGGGCGCGCGGGCGCACAGTGACAACAAGGA...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCAAAGATGGTGTCCATaGGCTCCAGGCGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHQRWCP*APGGTG
Trigger: CCCGGTACCGCCTGGAGCCCATGGACACCATCTTTG...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCCGAAGCCCCGCCCTATaGGCAGGGCCGTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSARSPAL*AGPSSF
Trigger: GAAGGAAGACGGCCCTGCCCATAGGGCGGGGCTTCG...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGACTCCGGGGGTCACTaGGCAGTGCTGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNDSGGH*AVLRWA
Trigger: AGCCCACCTCAGCACTGCCCAGTGACCCCCGGAGTC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCACTCCAGTCTGCTaGGGGGCACCCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVGTPVC*GAPGCQ
Trigger: CTGGCAGCCGGGTGCCCCCCAGCAGACTGGAGTGCC...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGGCACTCCAGTCTGCTaGGGGGCACCCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKGTPVC*GAPGCQ
Trigger: CTGGCAGCCGGGTGCCCCCCAGCAGACTGGAGTGCC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCGCCCGGCGGGGTACCTaGTTTGACAGCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLARRGT*FDSQCD
Trigger: GTCACACTGGCTGTCAAACCAGGTACCCCGCCGGGC...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCCCTCGGCAGAACGGGTaGCCCGGCTCAAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LTAEMKEIASISRAYGSFPRQNG*PGSSSH
Trigger: ATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAGG...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCCTCGGCAGAACGGGTaGCCCGGCTCAAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: VDGRDEGDRQHLPGVRLLPRQNG*PGSSSH
Trigger: ATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAGG...AAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCGGAAGGAGAGCGCATaGAGGAGGCCGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPRKESA*RRPVRR
Trigger: GCGCCGGACCGGCCTCCTCCATGCGCTCTCCTTCCG...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCAATGACGCAGGGGACTaGGCCAGGTTGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGNDAGD*ARLKVG
Trigger: GCCTACCTTCAACCTGGCCCAGTCCCCTGCGTCATT...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATCCGTACAACCCTGGGTaGCTCGGAGGCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNPYNPG*LGGLWW
Trigger: CCACCAGAGGCCTCCGAGCCACCCAGGGTTGTACGG...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCCCGTACAACCCTGGGTaGCTCGGAGGCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAPYNPG*LGGLWW
Trigger: CCACCAGAGGCCTCCGAGCCACCCAGGGTTGTACGG...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCACTGGCCTCTGGCTCTaGGGACTCGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGTGLWL*GLVTKS
Trigger: GGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGT...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTGAGAGTCTTCGGTGGTaGCCAAAGGGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VDGRDEGDRQHLPGVRLLESLRW*PKGPPS
Trigger: GGAAGGTGGCCCCTTTGGCCACCACCGAAGACTCTC...AAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGCTGGGTATGCGGTTTaGCAGGCGCCGCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNAGYAV*QAPQNP
Trigger: CGGGTTCTGCGGCGCCTGCCAAACCGCATACCCAGC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTGGCCGCAGCGACTCCTaGCTGCTGGACGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPGRSDS*LLDDAE
Trigger: CTCGGCGTCGTCCAGCAGCCAGGAGTCGCTGCGGCC...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGGCCGCAGCGACTCCTaGCTGCTGGACGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKGRSDS*LLDDAE
Trigger: CTCGGCGTCGTCCAGCAGCCAGGAGTCGCTGCGGCC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR CAA 72 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTaGGGGGCCCACGAACCCTTGGACTTGGCTGAACTA +
Preference number: 4 (lower is better)
Translates to: EIASISRAYGSF*GAHEPLDLAEL
Trigger: TAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGTAGGTCTTCCCAATaGCGCTTTCCCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPSRSSQ*RFPHSP
Trigger: AGGTGAATGGGGAAAGCGTCATTGGGAAGACCTACT...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCTCCCCGCTTACAAGCTaGGGTGGGAGGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSSPLTS*GGRAEE
Trigger: TTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGA...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTTCCTTCAGGCTGCAGTaGACGGCCGACTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPSFRLQ*TADSGG
Trigger: CCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGA...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGCCAGCCGGTCTCCTGTaGGAAGCCCCGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMPAGLL*EAPPYG
Trigger: CCCATAGGGCGGGGCTTCGCACAGGAGACCGGCTGG...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCAGTGTGACAAGGCCTaGTGGCACTCCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHQCDKA*WHSSLL
Trigger: CAGCAGACTGGAGTGCCAGCAGGCCTTGTCACACTG...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAAGGTCATCCAGGCCCTaGAGGCCAGACGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLRSSRP*RPDGGG
Trigger: CCCACCCCCGTCTGGCCTGCAGGGCCTGGATGACCT...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGCTCCAGGGCCCGGGTaGTGGGTTCCGGCCGTACAA +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKAPGPG*WVPAVQ
Trigger: TTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCATCACATTGAGGTCTTaGCAGCGCTCATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLPPLLALAVDGRDEGDRITLRS*QRSSCR
Trigger: CCTGCAGGATGAGCGCTGGCAAGACCTCAATGTGAT...GCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGCGCCCCCTCCTCTTCTaGTCATCACCTCTGGAACCC +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGRPLLF*SSPLEP
Trigger: GGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCG...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGGGCAGGATCCTGTGTaGACCAAAGGCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNGQDPV*TKGREP
Trigger: GGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATGGGTACACGATGAAGTaGCGCAGAGTGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDGYTMK*RRVKPK
Trigger: CTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCC...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAHGRLG*VHDEVA
Trigger: CGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTG...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCAAAGATGGTGTCCATaGGCTCCAGGCGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQQRWCP*APGGTG
Trigger: CCCGGTACCGCCTGGAGCCCATGGACACCATCTTTG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTAAGCATCCTGGGAGGTaGAGCAGGGCCACGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPKHPGR*SRATGG
Trigger: CCCGCCCGTGGCCCTGCTCCACCTCCCAGGATGCTT...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLRADER*EAQPHR
Trigger: GCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGTCGCCCACTGGCCTCTaGCTCTGGGGACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRSPTGL*LWGLVT
Trigger: GGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGA...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGTTCCCCTCGCCCACTaGCCTCTGGCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPVPLAH*PLALGT
Trigger: AGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAAC...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGGAGAGTCTTCGGTGGTaGCCAAAGGGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQESLRW*PKGPPS
Trigger: GGAAGGTGGCCCCTTTGGCCACCACCGAAGACTCTC...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGCCAGAGAGTCTTCGGTaGTGGCCAAAGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQPESLR*WPKGPP
Trigger: AGGTGGCCCCTTTGGCCACCACCGAAGACTCTCTGG...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGATTAAGGGGACGCGCTaGTTCTCCGTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGIKGTR*FSVAGW
Trigger: CCAGCCAGCCACGGAGAACCAGCGCGTCCCCTTAAT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATGGGCCCACGAACCCTTaGACTTGGCTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHGPTNP*TWLNYR
Trigger: CCTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCC...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTAGTAGCCCGACACAATaGAGCGCGTGTCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPSSPTQ*SACPRP
Trigger: CGGCCGCGGACACGCGCTCCATTGTGTCGGGCTACT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACTCGCAGGGCATGAGGTaGTGCGAGCTGAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNSQGMR*CELKDG
Trigger: GCCGTCCTTCAGCTCGCACCACCTCATGCCCTGCGA...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGTCTGCTCATCACCTCTaGAACCCCCTTCCATTCAAT +
Preference number: 4 (lower is better)
Translates to: VKPPGSKGALGRGGARAASAHHL*NPLPFN
Trigger: ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGA...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGCTACTGGAAACACCTTaGGACAATGACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGLLETP*DNDCTH
Trigger: GTGTGTGCAGTCATTGTCCCAAGGTGTTTCCAGTAG...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGGGAGAAGAGGGCGCTaGGTCCTGTCCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAGRRGR*VLSILQ
Trigger: CTGCAGGATGGACAGGACCCAGCGCCCTCTTCTCCC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp AGGCTCAGAAGGACCTATCGGGCGCATGTGTGCAGGGACACAGACCCCAGCAGCGGAGCCATGCGGACATaGGGTGGAAGGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLRRTYRAHVCRDTDPSSGAMRT*GGRLCP
Trigger: TGGACAAAGCCTTCCACCCCATGTCCGCATGGCTCC...GCTGCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATAGGTCCTTCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAGTAGGTCTTCCCAATaGCGCTTTCCCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLSRSSQ*RFPHSP
Trigger: AGGTGAATGGGGAAAGCGTCATTGGGAAGACCTACT...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAAQVVI*ASSVPA
Trigger: GGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGGGTCCGGCGCTGGAATaGTGGGCTGTAGCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRGPALE*WAVAPV
Trigger: TACCGGAGCTACAGCCCATCATTCCAGCGCCGGACC...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGTGTATTTGTCATCAGTaGAAAGAGGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPCICHQ*KEARAA
Trigger: AGCTGCCCGAGCCTCTTTTCACTGATGACAAATACA...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAAAGCGCTTAGAGGGTaGCTCAGGCAAAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: QAGEASWFQRGSREGWRPKALRG*LRQKDV
Trigger: AACATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTT...CGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCAGTGTGACAAGGCCTaGTGGCACTCCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLQCDKA*WHSSLL
Trigger: CAGCAGACTGGAGTGCCAGCAGGCCTTGTCACACTG...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKGSAEP*GPSGAS
Trigger: AGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGCAGCACTGTCATCCTTaGTCCCTGCGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEQHCHP*SLRAGP
Trigger: AGGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTG...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCAGTCGTCGTCGGTGCTaGTGCCCAGCCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLASRRRC*CPAPAP
Trigger: AGGCGCGGGGGCTGGGCAGCAGCACCGACGACGACT...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGGCTTGTGCGCCTCCTaGTCCGAGTCGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMGLCAS*SESSSV
Trigger: CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCAGGGCATGAGGTGGTaGGAGCTGAAGGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPQGMRW*ELKDGR
Trigger: CCGGCCGTCCTTCAGCTCGCACCACCTCATGCCCTG...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGCATGTCGTCCGCCGTaGCGCGGAGCCTTAGACGCA +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMACRPP*RGALDA
Trigger: TGCGTCTAAGGCTCCGCGGCACGGCGGACGACATGC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGCCTTCTCCTCTGCCCTaGCAGTTCCAGCACACCAAC +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGPSPLP*QFQHTN
Trigger: GTTGGTGTGCTGGAACTGGCAGGGCAGAGGAGAAGG...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAAGGGCAGGATCCTGTGTaGACCAAAGGCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQGQDPV*TKGREP
Trigger: GGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCC...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACAGAGCACCCATCTCTTaGGCCCAGTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNRAPIS*AQWQLW
Trigger: CCACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCT...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGAKPKPS*GLLYSS
Trigger: GCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTT...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAAGGGTACACGATGAAGTaGCGCAGAGTGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KEIASISRAYGSFLGAHEGYTMK*RRVKPK
Trigger: CTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCC...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAAGAAGAGTTGTCCAGGTaGGCACGGGCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQEELSR*ARAAGG
Trigger: GCCACCTGCTGCCCGTGCCCACCTGGACAACTCTTC...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAATGACGCAGGGGACTaGGCCAGGTTGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGNDAGD*ARLKVG
Trigger: GCCTACCTTCAACCTGGCCCAGTCCCCTGCGTCATT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGAATGACGCAGGGGACTaGGCCAGGTTGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQNDAGD*ARLKVG
Trigger: GCCTACCTTCAACCTGGCCCAGTCCCCTGCGTCATT...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTGTTCCCCTCGCCCACTaGCCTCTGGCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPVPLAH*PLALGT
Trigger: AGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAAC...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGAGAGTCTTCGGTGGTaGCCAAAGGGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAESLRW*PKGPPS
Trigger: GGAAGGTGGCCCCTTTGGCCACCACCGAAGACTCTC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGAACTACAGGGGCCCACGAACCCTTaGACTTGGCTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: AYGSFLGAHEPLDLAELQGPTNP*TWLNYR
Trigger: CCTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCC...CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGTCGCAGGGCATGAGGTaGTGCGAGCTGAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRSQGMR*CELKDG
Trigger: GCCGTCCTTCAGCTCGCACCACCTCATGCCCTGCGA...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGGGAGCCATGCGGACATaGGGTGGAAGGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGGAMRT*GGRLCP
Trigger: TGGACAAAGCCTTCCACCCCATGTCCGCATGGCTCC...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCAGTAGGTCTTCCCAATaGCGCTTTCCCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: EMKEIASISRAYGSFLGASRSSQ*RFPHSP
Trigger: AGGTGAATGGGGAAAGCGTCATTGGGAAGACCTACT...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGTCCGGCGCTGGAATaGTGGGCTGTAGCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVGPALE*WAVAPV
Trigger: TACCGGAGCTACAGCCCATCATTCCAGCGCCGGACC...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCGGCCTCTGGTGGGAATaGCGCAGGGGACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAGLWWE*RRGLGQ
Trigger: CTGGCCCAGTCCCCTGCGTCATTCCCACCAGAGGCC...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGTGGCTCTGGGATGCTaGGGGCCTCTCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPVALGC*GPLQNT
Trigger: CGTATTCTGGAGAGGCCCGCAGCATCCCAGAGCCAC...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAAAAGAACCAGTCTGAGTaGTGGATCAGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: KEIASISRAYGSFLGAHEKNQSE*WISVST
Trigger: CGTGGAGACACTGATCCAGCACTCAGACTGGTTCTT...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCTCCTTGTTGTCACTGTaGGCCCGCGCGCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLASLLSL*ARAPAG
Trigger: GCCTGCGGGCGCGCGGGCGCACAGTGACAACAAGGA...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAAAGAGACACTGCCTGCTaGGCCCTCCACCCACACCAT +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQRDTAC*ALHPHH
Trigger: ATGGTGTGGGTGGAGGGCGCAGCAGGCAGTGTCTCT...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTAGAGACACTGCCTGCTaGGCCCTCCACCCACACCAT +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPRDTAC*ALHPHH
Trigger: ATGGTGTGGGTGGAGGGCGCAGCAGGCAGTGTCTCT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGTATCGGGCGCATGTGTaGAGGGACACAGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRYRAHV*RDTDPS
Trigger: GCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATA...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGCCTTGGGACAATGACTaGACACACAAGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEPWDND*THKPLP
Trigger: GGGGAGGGGCTTGTGTGTGCAGTCATTGTCCCAAGG...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLLALAVDGRDEGDRQHKPKPS*GLLYSS
Trigger: GCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTT...ATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGCCCGGCGGGGTACCTaGTTTGACAGCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKARRGT*FDSQCD
Trigger: GTCACACTGGCTGTCAAACCAGGTACCCCGCCGGGC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCCTCGGCAGAACGGGTaGCCCGGCTCAAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPPRQNG*PGSSSH
Trigger: ATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAGG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATAATGACGCAGGGGACTaGGCCAGGTTGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNNDAGD*ARLKVG
Trigger: GCCTACCTTCAACCTGGCCCAGTCCCCTGCGTCATT...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACACTGGCCTCTGGCTCTaGGGACTCGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNTGLWL*GLVTKS
Trigger: GGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGT...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAACCAGAGAGTCTTCGGTaGTGGCCAAAGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQPESLR*WPKGPP
Trigger: AGGTGGCCCCTTTGGCCACCACCGAAGACTCTCTGG...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTATTAAGGGGACGCGCTaGTTCTCCGTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPIKGTR*FSVAGW
Trigger: CCAGCCAGCCACGGAGAACCAGCGCGTCCCCTTAAT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAAAACCAGTCTGAGTGCTaGATCAGTGTCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: KEIASISRAYGSFLGAHENQSEC*ISVSTI
Trigger: GATCGTGGAGACACTGATCCAGCACTCAGACTGGTT...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGGGGCCCACGAACCCTTaGACTTGGCTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEGPTNP*TWLNYR
Trigger: CCTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCC...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACGTACGGCTCCTTCTTaGGGGCCCACGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLRTAPS*GPTNPW
Trigger: CCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTACACGCTGCGGTCCATaGTGGACAGGGTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPTRCGP*WTGWSS
Trigger: GCTACTCCACCCTGTCCACCATGGACCGCAGCGTGT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAGTGTCCGTCTCCACGTaGCTCAGCTCGCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLVSVST*LSSLRS
Trigger: CGAGCGTAGCGAGCTGAGCCACGTGGAGACGGACAC...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGAGCGGCGCGGGAGGTaGGGATCACAGACACTGATG +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMERRGR*GSQTLM
Trigger: CATCAGTGTCTGTGATCCCCACCTCCCGCGCCGCTC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAGAGCGGCGCGGGAGGTaGGGATCACAGACACTGATG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLERRGR*GSQTLM
Trigger: CATCAGTGTCTGTGATCCCCACCTCCCGCGCCGCTC...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGGGAGAAGAGGGCGCTaGGTCCTGTCCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKGRRGR*VLSILQ
Trigger: CTGCAGGATGGACAGGACCCAGCGCCCTCTTCTCCC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGTCTATTTACAGCCTGTaGGGAGAAGAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGSIYSL*GEEGAG
Trigger: CCCAGCGCCCTCTTCTCCCCACAGGCTGTAAATAGA...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMAQVVI*ASSVPA
Trigger: GGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGTGTATTTGTCATCAGTaGAAAGAGGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGCICHQ*KEARAA
Trigger: AGCTGCCCGAGCCTCTTTTCACTGATGACAAATACA...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTGTATTTGTCATCAGTaGAAAGAGGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRLTAEMKEIASISRAYGCICHQ*KEARAA
Trigger: AGCTGCCCGAGCCTCTTTTCACTGATGACAAATACA...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR TCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAATGGACTCCAGGCTGCTaGGTCCGGAGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQWTPGC*VRSPCC
Trigger: ACAACAAGGACTCCGGACTCAGCAGCCTGGAGTCCA...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGGAGGTGCAGGCTGGTaGAGCCTCCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMGGAGW*SLLVPK
Trigger: CTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTGGAGGTGCAGGCTGGTaGAGCCTCCTGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPGGAGW*SLLVPK
Trigger: CTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCC...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCAGACAGCAGGGGTGTTaGCTATCCCTCCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSARQQGC*LSLLLR
Trigger: CCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCT...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACAGCACTGTCATCCTTaGTCCCTGCGGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLQHCHP*SLRAGP
Trigger: AGGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTAAGAACCAGTCTGAGTaGTGGATCAGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: DGRDEGDRQHLPGVRLLLKNQSE*WISVST
Trigger: CGTGGAGACACTGATCCAGCACTCAGACTGGTTCTT...AAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR GCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCGACGCAGCGCCTCCATaGGCGAGGGCCGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSDAAPP*ARAGRP
Trigger: TGGCCTCCCGGCCCTCGCGCATGGAGGCGCTGCGTC...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAATATCGGGCGCATGTGTaGAGGGACACAGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKYRAHV*RDTDPS
Trigger: GCTGGGGTCTGTGTCCCTGCACACATGCGCCCGATA...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAAGAGCACCCATCTCTTaGGCCCAGTGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLRAPIS*AQWQLW
Trigger: CCACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCT...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCCGAAGCCCCGCCCTATaGGCAGGGCCGTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLARSPAL*AGPSSF
Trigger: GAAGGAAGACGGCCCTGCCCATAGGGCGGGGCTTCG...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTTGGCTCAAAGCATCCTaGGAGGTGGAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPWLKAS*EVEQGH
Trigger: GTGGCCCTGCTCCACCTCCCAGGATGCTTTGAGCCA...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAATGGCTCAAAGCATCCTaGGAGGTGGAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKWLKAS*EVEQGH
Trigger: GTGGCCCTGCTCCACCTCCCAGGATGCTTTGAGCCA...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGCCTCGGCAGAACGGGTaGCCCGGCTCAAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMPRQNG*PGSSSH
Trigger: ATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAGG...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACCAGAGAGTCTTCGGTaGTGGCCAAAGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLPESLR*WPKGPP
Trigger: AGGTGGCCCCTTTGGCCACCACCGAAGACTCTCTGG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGAACCAGTCTGAGTGCTaGATCAGTGTCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: TAEMKEIASISRAYGSFLNQSEC*ISVSTI
Trigger: GATCGTGGAGACACTGATCCAGCACTCAGACTGGTT...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAACCTAGCCACACCCCATaGTCCACAAGGGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKPSHTP*STRVPK
Trigger: CTTGGGGACCCTTGTGGACCATGGGGTGTGGCTAGG...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACCTAGCCACACCCCATaGTCCACAAGGGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLPSHTP*STRVPK
Trigger: CTTGGGGACCCTTGTGGACCATGGGGTGTGGCTAGG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGTCAGTCCTGCCTCCTTaGAATGGCCCCAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRSVLPP*NGPNPL
Trigger: AAGGGGGTTGGGGCCATTCCAAGGAGGCAGGACTGA...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCCACCAAAAACTGTCTaGGGAACAGGCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPPPKTV*GTGSCP
Trigger: CGGGCAGCTGCCTGTTCCCCAGACAGTTTTTGGTGG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCCCAAGGACCCGTCGGTaGAGAAGCTCCGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAPRTRR*RSSGAS
Trigger: GGATGCTCCGGAGCTTCTTCACCGACGGGTCCTTGG...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTATCCCCGCTTACAAGCTaGGGTGGGAGGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLSPLTS*GGRAEE
Trigger: TTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGA...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGGTGTGTGGGGGCTGGCCTGGTGATTGGAAGTCTATTTACAGCCTGTGGGGAGTGGGGGCTGGCCTGGTaGTTGGAAGTCTATTTACAG +
Preference number: 4 (lower is better)
Translates to: GCVGAGLVIGSLFTACGEWGLAW*LEVYLQ
Trigger: CTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCA...CTCCCCACAGGCTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCACACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGTGTCAAGGACACAGTaGAAGGAGCCATGCGGACAT +
Preference number: 4 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAVSRTQ*KEPCGH
Trigger: ATGTCCGCATGGCTCCTTTCACTGTGTCCTTGACAC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGCAGTGTGACAAGGCCTaGTGGCACTCCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVQCDKA*WHSSLL
Trigger: CAGCAGACTGGAGTGCCAGCAGGCCTTGTCACACTG...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATATCACATTGAGGTCTTaGCAGCGCTCATCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNITLRS*QRSSCR
Trigger: CCTGCAGGATGAGCGCTGGCAAGACCTCAATGTGAT...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCGCAGCGACTCCTGGCTaGTGGACGACGCCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSAATPG*WTTPSR
Trigger: CCGGCTCGGCGTCGTCCAGCAGCCAGGAGTCGCTGC...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGAGGTGGGCTTCTGTGTaGCTGGGCTGTGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVRWASV*LGCGRN
Trigger: GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCT...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCTGGGGCCTGGGGCCCTaGCAGGTCCCGAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QKASITQDLSFSLKLRGSWGLGP*QVPSWA
Trigger: TGCCCAACTCGGGACCTGCCAGGGCCCCAGGCCCCA...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAACCAGTCTGAGTGCTaGATCAGTGTCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGNQSEC*ISVSTI
Trigger: GATCGTGGAGACACTGATCCAGCACTCAGACTGGTT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTGGGCCCACGAACCCTTaGACTTGGCTGAACTACAGG +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPGPTNP*TWLNYR
Trigger: CCTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCC...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAAGGGTGTGTGGGGGCTaGCCTGGTGATTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKRVCGG*PGDWKS
Trigger: AGACTTCCAATCACCAGGCCAGCCCCCACACACCCT...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGAGACAGCAGGGGTGTTaGCTATCCCTCCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVRQQGC*LSLLLR
Trigger: CCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCT...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GACCAGGGTGGGGATAGGGGGACAGAAGTCGCTACTGGAAACACCTTGGGACAATGGGGGCTGGCCTGGTaGTTGGAAGTCTATTTACAG +
Preference number: 4 (lower is better)
Translates to: DQGGDRGTEVATGNTLGQWGLAW*LEVYLQ
Trigger: CTGTAAATAGACTTCCAATCACCAGGCCAGCCCCCA...TTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTCCCCCTATCCCCACCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCGCTCCAGGGCCCGGGTaGTGGGTTCCGGCCGTACAA +
Preference number: 4 (lower is better)
Translates to: QKASITQDLSFSLKLRGSAPGPG*WVPAVQ
Trigger: TTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGC...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACAAGAACCAGTCTGAGTaGTGGATCAGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNKNQSE*WISVST
Trigger: CGTGGAGACACTGATCCAGCACTCAGACTGGTTCTT...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCCAAAGATGGTGTCCATaGGCTCCAGGCGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAQRWCP*APGGTG
Trigger: CCCGGTACCGCCTGGAGCCCATGGACACCATCTTTG...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGGACAGAAGTCGCTACTaGAAACACCTTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGDRSRY*KHLGTM
Trigger: CATTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTC...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGACAGGCAGCTGCCCGTaGTTAAAGCGCTTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVTGSCP*LKRLEG
Trigger: ACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTTCTGGATCAGAGCTATaGCCTGAGAGTAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPSGSEL*PESRSS
Trigger: GGAAGACCTACTCTCAGGTCATAGCTCTGATCCAGA...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATAAAGCGCTTAGAGGGTaGCTCAGGCAAAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNKALRG*LRQKDV
Trigger: AACATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTT...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTAAATCAGTGTGTGAGTaGCAGAGAGACAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPKSVCE*QRDSRG
Trigger: ACCCCTGCTGTCTCTCTGTCACTCACACACTGATTT...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVKPKPS*GLLYSS
Trigger: GCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTT...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLKPKPS*GLLYSS
Trigger: GCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTT...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGGTACACGATGAAGTaGCGCAGAGTGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVGYTMK*RRVKPK
Trigger: CTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCC...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCGCTGCGGTCCATGGTaGACAGGGTGGAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: QKASITQDLSFSLKLRGSRCGPW*TGWSSP
Trigger: CGGGCTACTCCACCCTGTCCACCATGGACCGCAGCG...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACTCTGCTCATCACCTCTaGAACCCCCTTCCATTCAAT +
Preference number: 4 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNSAHHL*NPLPFN
Trigger: ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGA...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGCAGGCAAAAGGATGTTaGGGAGTAACCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVQAKGC*GVTLVR
Trigger: CCTCACCAGGGTTACTCCCCAACATCCTTTTGCCTG...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCAGGGTGTGTGGGGGCTaGCCTGGTGATTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLARVCGG*PGDWKS
Trigger: AGACTTCCAATCACCAGGCCAGCCCCCACACACCCT...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGCATGCGGACATGGGGTaGAAGGCTTTGTCCAACACT +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMHADMG*KALSNT
Trigger: AGTGTTGGACAAAGCCTTCCACCCCATGTCCGCATG...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACATGCGGACATGGGGTaGAAGGCTTTGTCCAACACT +
Preference number: 4 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLHADMG*KALSNT
Trigger: AGTGTTGGACAAAGCCTTCCACCCCATGTCCGCATG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGAGTAGGTCTTCCCAATaGCGCTTTCCCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVSRSSQ*RFPHSP
Trigger: AGGTGAATGGGGAAAGCGTCATTGGGAAGACCTACT...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGAAATCAGTGTGTGAGTaGCAGAGAGACAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMKSVCE*QRDSRG
Trigger: ACCCCTGCTGTCTCTCTGTCACTCACACACTGATTT...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: QKASITQDLSFSLKLRGSHGRLG*VHDEVA
Trigger: CGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTG...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp TCATCACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTAACCAGTCTGAGTGCTaGATCAGTGTCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: SSPLEPPSIQLVRPQPSPNQSEC*ISVSTI
Trigger: GATCGTGGAGACACTGATCCAGCACTCAGACTGGTT...AGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCGTGTCCGTCTCCACGTaGCTCAGCTCGCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSVSVST*LSSLRS
Trigger: CGAGCGTAGCGAGCTGAGCCACGTGGAGACGGACAC...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGCTTACAAGCTGAGGTaGGAGGGCAGAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVAYKLR*EGRRKK
Trigger: CTTCTTTCTTCTGCCCTCCCACCTCAGCTTGTAAGC...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
3UTR CAA 72 bp TTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGTaGGGGAGTAACCCTGGTGAGGGTTTCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LKRLEGDSGKRM*GSNPGEGFSPA
Trigger: GGCAGGACTGAAACCCTCACCAGGGTTACTCCCCAACATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR TCA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGTGTATTTGTCATCAGTaGAAAGAGGCTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVCICHQ*KEARAA
Trigger: AGCTGCCCGAGCCTCTTTTCACTGATGACAAATACA...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGAAATTTTAGTTGTTaGCAGAGAGGTGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPGNFSC*QRGVSR
Trigger: CCTTGACACACCTCTCTGGCAACAACTAAAATTTCC...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGGAAATTTTAGTTGTTaGCAGAGAGGTGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMGNFSC*QRGVSR
Trigger: CCTTGACACACCTCTCTGGCAACAACTAAAATTTCC...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCCTACTGGAAACACCTTaGGACAATGACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: ASITQDLSFSLKLRGSLALLETP*DNDCTH
Trigger: GTGTGTGCAGTCATTGTCCCAAGGTGTTTCCAGTAG...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCCAGGCAAAAGGATGTTaGGGAGTAACCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSQAKGC*GVTLVR
Trigger: CCTCACCAGGGTTACTCCCCAACATCCTTTTGCCTG...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCAAGAACCAGTCTGAGTaGTGGATCAGTGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSKNQSE*WISVST
Trigger: CGTGGAGACACTGATCCAGCACTCAGACTGGTTCTT...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR GCA 90 bp GTAACTTGCCCAATGTCCCAAACTACTAAATGGTGGAGCCAGAACTCAAACCCACCAGGACTGTCTGACTaGAGAGTCTGTGCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: VTCPMSQTTKWWSQNSNPPGLSD*RVCASN
Trigger: GTTAGAAGCACAGACTCTGCAGTCAGACAGTCCTGG...TGGGTTTGAGTTCTGGCTCCACCATTTAGTAGTTTGGGACATTGGGCAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS-3UTR CCA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCGACAGAAGTCGCTACTaGAAACACCTTGGGACAATG +
Preference number: 4 (lower is better)
Translates to: QEILVVAREVCQGHSERSDRSRY*KHLGTM
Trigger: CATTGTCCCAAGGTGTTTCCAGTAGCGACTTCTGTC...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CCA 90 bp GTAACTTGCCCAATGTCCCAAACTACTAAATGGTGGAGCCAGAACTCAAACCCATCCCAAACTACTAAATaGTGGAGCCAGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: VTCPMSQTTKWWSQNSNPSQTTK*WSQNSN
Trigger: GTTTGAGTTCTGGCTCCACCATTTAGTAGTTTGGGA...TGGGTTTGAGTTCTGGCTCCACCATTTAGTAGTTTGGGACATTGGGCAAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS-3UTR GCA 90 bp GTAACTTGCCCAATGTCCCAAACTACTAAATGGTGGAGCCAGAACTCAAACCCATTATTTCCTTCTGCTTaGTTTAGGCTCTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VTCPMSQTTKWWSQNSNPLFPSA*FRLSKD
Trigger: GTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAAATAA...TGGGTTTGAGTTCTGGCTCCACCATTTAGTAGTTTGGGACATTGGGCAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS-3UTR CCA 90 bp TTATTTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTCAAACTACTAAATGGTaGAGCCAGAACTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: LFPSACFRLSKDLKGYLFQTTKW*SQNSNP
Trigger: TGGGTTTGAGTTCTGGCTCCACCATTTAGTAGTTTG...AAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS-3UTR CCA 90 bp TTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTATTTCCCAAACTACTAAATaGTGGAGCCAGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: FLLLALGSPKTLKDICFISQTTK*WSQNSN
Trigger: GTTTGAGTTCTGGCTCCACCATTTAGTAGTTTGGGA...AATAAAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS-3UTR GCA 90 bp TTATTTCCTTCTGCTTGCTTTAGGCTCTCCAAAGACCTTAAAGGATATCTGTTTTTATTTCCTTCTGCTTaGTTTAGGCTCTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LFPSACFRLSKDLKGYLFLFPSA*FRLSKD
Trigger: GTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAAATAA...AAACAGATATCCTTTAAGGTCTTTGGAGAGCCTAAAGCAAGCAGAAGGAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614693.1
ENST00000634129.1
CDS GCA 90 bp GGTCAGTCAGCGGGCTCTGCACCACCACGGTGTGGCGGCGCCAGCTaGTCCGGCGCCGCCGGGTCTCGGGCGACAGCGGCCGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: GQSAGSAPPRCGGAS*SGAAGSRATAAAAG
Trigger: GCCTGCGGCGGCCGCTGTCGCCCGAGACCCGGCGGCGCCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 90 bp GCGACAGCGGCCGCCGCAGGCGCACGGCGAGCATGTCGTCCGCCGTaGCGCGGAGCCTTAGACGCAGCGCCTCCATGCGCGAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: ATAAAAGARRACRPP*RGALDAAPPCARAG
Trigger: CCCGGCCCTCGCGCATGGAGGCGCTGCGTCTAAGGCTCCGCGGCACGGCGGACGACATGCTCGCCGTGCGCCTGCGGCGGCCGCTGTCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 90 bp ACACGCTGCGGTCCATGGTGGACAGGGTGGAGTAGCCCGACACAATaGAGCGCGTGTCCGCGGCCGGCCGCTCCTCCGGCGCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: TRCGPWWTGWSSPTQ*SACPRPAAPPAPPG
Trigger: CCCCGGCGGCGCCGGAGGAGCGGCCGGCCGCGGACACGCGCTCCATTGTGTCGGGCTACTCCACCCTGTCCACCATGGACCGCAGCGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 90 bp GTGGCTCAGCTCGCTACGCTCGTCGTCCGCCTCATCCCCCGCCCCTaGCCGCCGACCGCTAGCGCCCGAGCACACGCTGCGGTCCATGGT +
Preference number: 5 (lower is better)
Translates to: VAQLATLVVRLIPRP*PPTASARAHAAVHG
Trigger: ACCATGGACCGCAGCGTGTGCTCGGGCGCTAGCGGTCGGCGGGCAGGGGCGGGGGATGAGGCGGACGACGAGCGTAGCGAGCTGAGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS TCA 90 bp AGGCAGCGGACGACGGGGCCCGCGCCTTGGTGGACTCCAGGCTGCTaGGTCCGGAGTCCTTGTTGTCACTGTGCGCCCGCGCGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RQRTTGPAPWWTPGC*VRSPCCHCAPARPQ
Trigger: CTGCGGGCGCGCGGGCGCACAGTGACAACAAGGACTCCGGACTCAGCAGCCTGGAGTCCACCAAGGCGCGGGCCCCGTCGTCCGCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 90 bp CCACCTCATCGCCGCGATCCTCCGCAGGAGGCTCCAGGGCCCGGGTaGTGGGTTCCGGCCGTACAACCCTGGGTGGCTCGGAGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PPHRRDPPQEAPGPG*WVPAVQPWVARRPL
Trigger: CAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGCCTCCTGCGGAGGATCGCGGCGATGAGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 90 bp CCTCATCGCCGCGATCCTCCGCAGGAGGCTCCAGGGCCCGGGTGCTaGGTTCCGGCCGTACAACCCTGGGTGGCTCGGAGGCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: PHRRDPPQEAPGPGC*VPAVQPWVARRPLV
Trigger: CACCAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGGAACCCAGCACCCGGGCCCTGGAGCCTCCTGCGGAGGATCGCGGCGATGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 90 bp GGCAGGTCCCGAGTTGGGCAGGCGGGGGTGCGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGCTCAAAGCGGGGTGACACCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GRSRVGQAGVRADER*EAQPHRSKRGDTSA
Trigger: GGCACTGGTGTCACCCCGCTTTGAGCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAACTCGGGACCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS-3UTR CAA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCGCCGCTTCTTGCGCTaGCGGTTGACGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: AVAPAPGLCASCSESSSVRRFLR*RLTAEM
Trigger: CATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCG...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS GCA 90 bp CCCAGCTCCTTCCACTCGTTGAAGTTGAGGTCAGTCAGCGGGCTCTaGACCACCACGGTGTGGCGGCGCCAGCTGCTCCGGCGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: PSSFHSLKLRSVSGL*TTTVWRRQLLRRRR
Trigger: CCGGCGGCGCCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGACCTCAACTTCAACGAGTGGAAGGAGCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GCTGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGGAGAGCACCCATCTCTaGGGCCCAGTGGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AVAPAPGLCASCSESSSVESTHL*GPVAAV
Trigger: CACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCTC...CACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACTGGCAGGTCCCGAGTaGGGCAGGCGGGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: KEIASISRAYGSFLGAHELAGPE*GRRGCG
Trigger: CCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCAG...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp TGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTGCGTACGGCTCCTTCTaGGGGGCCCACGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: CGPRPRLVRLLLRVVVGAAYGSF*GAHEPL
Trigger: CAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC...AGCACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS CCA 90 bp GCTCATCCCCAAGGAAGAGTTGTCCAGGTGGGCACGGGCAGCAGGTaGCACACGGAGCCCCGGGTCACTCCAGGCAGCAGGACTCCGGGG +
Preference number: 5 (lower is better)
Translates to: AHPQGRVVQVGTGSR*HTEPRVTPGSRTPG
Trigger: CCCCGGAGTCCTGCTGCCTGGAGTGACCCGGGGCTCCGTGTGCCACCTGCTGCCCGTGCCCACCTGGACAACTCTTCCTTGGGGATGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS-3UTR CAA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCCTGGCAGGTCCCGAGTaGGGCAGGCGGGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: LTAEMKEIASISRAYGSFLAGPE*GRRGCG
Trigger: CCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCAG...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGGCGTACGGCTCCTTCTaGGGGGCCCACGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGAYGSF*GAHEPL
Trigger: CAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGCGCCGCTTCTTGCGCTaGCGGTTGACGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWRRFLR*RLTAEM
Trigger: CATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCG...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGAGTCCGGAGTCCTTGTaGTCACTGTGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWSPESL*SLCARA
Trigger: CGCGCGGGCGCACAGTGACAACAAGGACTCCGGACT...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS TCA 90 bp CCCCAGTGCCTCGGCAGAACGGGTGGCCCGGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCCCTCCTGGCCCAGCTGGCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: PQCLGRTGGPAQVVI*ASSVPALLAQLAQS
Trigger: GCTTTGAGCCAGCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAGGCACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS-3UTR CAA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGAGAGCACCCATCTCTaGGGCCCAGTGGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GEASWFQRGSREGWRPSGESTHL*GPVAAV
Trigger: CACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCTC...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCCCGTCCTGGGGACTTTaGTACAGCAGCAGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: GEASWFQRGSREGWRPSGPSWGL*YSSSVL
Trigger: GAGGACGCTGCTGCTGTACAAAAGTCCCCAGGACGG...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGGCGGGGTACCTGGTTaGACAGCCAGTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWGGVPG*TASVTR
Trigger: CCTTGTCACACTGGCTGTCAAACCAGGTACCCCGCC...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGGAGGGACGTGCTTGGCTaGGAGGTCAATGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: AGRILCAPKAGSPGAQSGRDVLG*EVNAGA
Trigger: AGCCCCAGCATTGACCTCCAAGCCAAGCACGTCCCT...CCCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp TCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTGGACTTGGCTGGCAGCACTGTCATCCTaGCTCCCTGCGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SPGRTAPSWGPTNPWTWLAALSS*LPAGRS
Trigger: GGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTGC...CAGCCAAGTCCAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGGGGCCCACGAACCCTaGGACTTGGCTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: GEASWFQRGSREGWRPSGGAHEP*DLAELQ
Trigger: CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCC...GCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGCCTCCCGCCGCTTCTaGCGCTTGCGGTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: TAEMKEIASISRAYGSFLASRRF*RLRLTA
Trigger: GGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGC...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp TGTGGCCCCCGCCCCAGGCTTGTGCGCCTCCTGCTCCGAGTCGTCGTCGGTGCTAGGATGTCCTCGTCCTaGGGCATGATAGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: CGPRPRLVRLLLRVVVGARMSSS*GMIDSS
Trigger: GGAGCTGTCTATCATGCCCAAGGACGAGGACATCCT...AGCACCGACGACGACTCGGAGCAGGAGGCGCACAAGCCTGGGGCGGGGGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTCTGGCAGGTCCCGAGTaGGGCAGGCGGGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPLAGPE*GRRGCG
Trigger: CCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCAG...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGCAGCACTGTCATCCTaGCTCCCTGCGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGAALSS*LPAGRS
Trigger: GGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTGC...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCGCGTACGGCTCCTTCTaGGGGGCCCACGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: LRLTAEMKEIASISRAYGAYGSF*GAHEPL
Trigger: CAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp AAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACGCCGCTTCTTGCGCTaGCGGTTGACGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: KEIASISRAYGSFLGAHERRFLR*RLTAEM
Trigger: CATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCG...TTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGGAGAGCACCCATCTCTaGGGCCCAGTGGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRESTHL*GPVAAV
Trigger: CACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCTC...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGGGTGGCGCCCGAGCGGCGAGGATGTCCTCGTCCTaGGGCATGATAGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: VKPPGSKGALGRGGARAARMSSS*GMIDSS
Trigger: GGAGCTGTCTATCATGCCCAAGGACGAGGACATCCT...CGCCGCTCGGGCGCCACCCCTCCCTAGAGCCCCTTTGGAACCAGGAGGCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACTGGCAGGTCCCGAGTaGGGCAGGCGGGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLLAGPE*GRRGCG
Trigger: CCCGCACCCCCGCCTGCCCAACTCGGGACCTGCCAG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CCGCGCCTCCCGCCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATAGGGACGTGCTTGGCTaGGAGGTCAATGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PRLPPLLALAVDGRDEGDRDVLG*EVNAGA
Trigger: AGCCCCAGCATTGACCTCCAAGCCAAGCACGTCCCT...ATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGACGGGGCCCGCGCCTaGGTGGACTCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GVLTIPPPKGKKVGFCVPDGARA*VDSRLL
Trigger: CAGCAGCCTGGAGTCCACCAAGGCGCGGGCCCCGTC...AGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 90 bp CACCAAATCCAAGGTTCATCTGTCTTGCGGGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCTGCCTCAGGACCACCTCATCGCCGC +
Preference number: 5 (lower is better)
Translates to: HQIQGSSVLRGSAEP*GPSGASASGPPHRR
Trigger: GCGGCGATGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTGGATTTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 90 bp GGTGGGTACACGATGAAGTGGCGCAGAGTGAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGCAGCGTCCTCGGCCCCTGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GGYTMKWRRVKPKPS*GLLYSSSVLGPCQG
Trigger: CCCCTGGCAGGGGCCGAGGACGCTGCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS CCA 90 bp CACCTTCCTGCCCAGGCGTTCCCCTCGCCCACTGGCCTCTGGCTCTaGGGACTCGTCACCAAATCCAAGGTTCATCTGTCTTGCGGGGGT +
Preference number: 5 (lower is better)
Translates to: HLPAQAFPSPTGLWL*GLVTKSKVHLSCGG
Trigger: ACCCCCGCAAGACAGATGAACCTTGGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAACGCCTGGGCAGGAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS-3UTR CAA 90 bp GGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCGGGGTACCTGGTTaGACAGCCAGTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: GRDEGDRQHLPGVRLLLGGGVPG*TASVTR
Trigger: CCTTGTCACACTGGCTGTCAAACCAGGTACCCCGCC...CCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp TTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCAGGGACGTGCTTGGCTaGGAGGTCAATGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LRLTAEMKEIASISRAYGRDVLG*EVNAGA
Trigger: AGCCCCAGCATTGACCTCCAAGCCAAGCACGTCCCT...GCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGGGGGCCCACGAACCCTaGGACTTGGCTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: LAVDGRDEGDRQHLPGVRGAHEP*DLAELQ
Trigger: CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCC...CCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGTCCGGAGTCCTTGTaGTCACTGTGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGSPESL*SLCARA
Trigger: CGCGCGGGCGCACAGTGACAACAAGGACTCCGGACT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGCGGGCAGGATCCTGTGTGCACCAAAGGCAGGGAGCCCGGGGGCGCAAAGTGGTCAGGCAAAAGGATGTaGGGGAGTAACCCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: GGQDPVCTKGREPGGAKWSGKRM*GSNPGE
Trigger: CTCACCAGGGTTACTCCCCAACATCCTTTTGCCTGA...CCACTTTGCGCCCCCGGGCTCCCTGCCTTTGGTGCACACAGGATCCTGCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp TTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCGGGGCCCACGAACCCTaGGACTTGGCTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: LTAEMKEIASISRAYGSFGAHEP*DLAELQ
Trigger: CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCC...GAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GCCCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATGCGTACGGCTCCTTCTaGGGGGCCCACGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: AHAPSSSAHHLWNPLPFNAYGSF*GAHEPL
Trigger: CAAGGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGC...ATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS TCA 90 bp GACTCGTCACCAAATCCAAGGTTCATCTGTCTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGGGGCTTCTGCCTCAGGACCACCTCA +
Preference number: 5 (lower is better)
Translates to: DSSPNPRFICLAGVS*TLRPVGGFCLRTTS
Trigger: TGAGGTGGTCCTGAGGCAGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTGGATTTGGTGACGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS-3UTR CAA 90 bp GAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCAGGATGTCCTCGTCCTaGGGCATGATAGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: EMKEIASISRAYGSFLGARMSSS*GMIDSS
Trigger: GGAGCTGTCTATCATGCCCAAGGACGAGGACATCCT...GGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS CCA 90 bp TTCAGGCTGCAGTGCACGGCCGACTCGGGTGGGTACACGATGAAGTaGCGCAGAGTGAAGCCAAAGCCGTCCTGGGGACTTTTGTACAGC +
Preference number: 5 (lower is better)
Translates to: FRLQCTADSGGYTMK*RRVKPKPSWGLLYS
Trigger: GCTGTACAAAAGTCCCCAGGACGGCTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTGCACTGCAGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS CCA 90 bp TCCATTCTCTTCCTCCTTCAGGCTGCAGTGCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCGCAGAGTGAAGCCAAAGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: SILFLLQAAVHGRLG*VHDEVAQSEAKAVL
Trigger: CAGGACGGCTTTGGCTTCACTCTGCGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGAGGAAGAGAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS-3UTR CAA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCGGCGGGGTACCTGGTTaGACAGCCAGTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAGGVPG*TASVTR
Trigger: CCTTGTCACACTGGCTGTCAAACCAGGTACCCCGCC...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp ACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGCAAGGTTCATCTGTCTaGCGGGGGTCAGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: TAEMKEIASISRAYGSFLQGSSV*RGSAEP
Trigger: AGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTG...CAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp GACGGCCGAGATGAAGGAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTCAAGGTTCATCTGTCTaGCGGGGGTCAGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: DGRDEGDRQHLPGVRLLLQGSSV*RGSAEP
Trigger: AGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTG...AAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTCCTTCATCTCGGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAGCAGCACTGTCATCCTaGCTCCCTGCGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLAALSS*LPAGRS
Trigger: GGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTGC...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CCCCAGACATACACACATCCCCGCTTACAAGCTGAGGTGGGAGGGCAGAAGAAAGCAGCACTGTCATCCTaGCTCCCTGCGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PQTYTHPRLQAEVGGQKKAALSS*LPAGRS
Trigger: GGACCTGCCCGCAGGGAGCAAGGATGACAGTGCTGC...TTTCTTCTGCCCTCCCACCTCAGCTTGTAAGCGGGGATGTGTGTATGTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GAGATCGCCAGCATCTCCCGGGCGTACGGCTCCTTCTTGGGGGCCCACGAACCCTTCCGGGGTTCCATCTaGTTTTTCTCAGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: EIASISRAYGSFLGAHEPFRGSI*FFSEWS
Trigger: TGACCACTCTGAGAAAAACAAGATGGAACCCCGGAA...GGGTTCGTGGGCCCCCAAGAAGGAGCCGTACGCCCGGGAGATGCTGGCGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTACGCCGCTTCTTGCGCTaGCGGTTGACGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLRRFLR*RLTAEM
Trigger: CATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGGCG...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGCTGAGTCCGGAGTCCTaGTTGTCACTGTGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRLSPES*LSLCAR
Trigger: GCGGGCGCACAGTGACAACAAGGACTCCGGACTCAG...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGGATGTCCTCGTCCTaGGGCATGATAGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGRMSSS*GMIDSS
Trigger: GGAGCTGTCTATCATGCCCAAGGACGAGGACATCCT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGCAAGGTTCATCTGTCTaGCGGGGGTCAGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGQGSSV*RGSAEP
Trigger: AGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTG...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGAGGGACGTGCTTGGCTaGGAGGTCAATGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRRDVLG*EVNAGA
Trigger: AGCCCCAGCATTGACCTCCAAGCCAAGCACGTCCCT...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GACAGAGAGACAGCAGGGGTGTTGACTATCCCTCCTCCTAAGGGGAAGAAGGTGGGGGCCCACGAACCCTaGGACTTGGCTGAACTACAG +
Preference number: 5 (lower is better)
Translates to: DRETAGVLTIPPPKGKKVGAHEP*DLAELQ
Trigger: CTGTAGTTCAGCCAAGTCCAAGGGTTCGTGGGCCCC...CACCTTCTTCCCCTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp ACCTCTGGAACCCCCTTCCATTCAATTAGTCCGGCCCCAGCCTTCTCCTCTGCCTTCCACTCGTTGAAGTaGAGGTCAGTCAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: TSGTPFHSISPAPAFSSAFHSLK*RSVSGL
Trigger: GAGCCCGCTGACTGACCTCAACTTCAACGAGTGGAA...GGCAGAGGAGAAGGCTGGGGCCGGACTAATTGAATGGAAGGGGGTTCCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAGAAGAGGAGGTGCAGGCTGGTGAAGCCTCCTGGTTCCAAAGGGGCTCTAGGGAGCTCCTTCCACTCGTaGAAGTTGAGGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QKRRCRLVKPPGSKGALGSSFHS*KLRSVS
Trigger: GCTGACTGACCTCAACTTCAACGAGTGGAAGGAGCT...CCCTAGAGCCCCTTTGGAACCAGGAGGCTTCACCAGCCTGCACCTCCTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAGGAAATTTTAGTTGTTGCCAGAGAGGTGTGTCAAGGACACAGTGAAAGGAGCGACGGGGCCCGCGCCTaGGTGGACTCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QEILVVAREVCQGHSERSDGARA*VDSRLL
Trigger: CAGCAGCCTGGAGTCCACCAAGGCGCGGGCCCCGTC...GCTCCTTTCACTGTGTCCTTGACACACCTCTCTGGCAACAACTAAAATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CTCCTCCTAAGGGGAAGAAGGTGGGCTTCTGTGTGCCTGGGCTGTGGAAGGAACGAGACAGCAGGGGTGTaGACTATCCCTCCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: LLLRGRRWASVCLGCGRNETAGV*TIPPPK
Trigger: CTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTC...GTTCCTTCCACAGCCCAGGCACACAGAAGCCCACCTTCTTCCCCTTAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCGAGAGCACCCATCTCTaGGGCCCAGTGGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAESTHL*GPVAAV
Trigger: CACAGCTGCCACTGGGCCCAAGAGATGGGTGCTCTC...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCGCCTCCCGCCGCTTCTaGCGCTTGCGGTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: QKASITQDLSFSLKLRGSASRRF*RLRLTA
Trigger: GGCCGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGC...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CCGCTTCTTGCGCTTGCGGTTGACGGCCGAGATGAAGGAGATCGCCAGCATCTCTTCCGGGGTTCCATCTaGTTTTTCTCAGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PLLALAVDGRDEGDRQHLFRGSI*FFSEWS
Trigger: TGACCACTCTGAGAAAAACAAGATGGAACCCCGGAA...GAGATGCTGGCGATCTCCTTCATCTCGGCCGTCAACCGCAAGCGCAAGAAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620417.4
ENST00000631799.1
CDS-3UTR CAA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTAAGCTCCTTCCACTCGTaGAAGTTGAGGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLSSFHS*KLRSVS
Trigger: GCTGACTGACCTCAACTTCAACGAGTGGAAGGAGCT...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CCACGCCCCCTCCTCTTCTGCTCATCACCTCTGGAACCCCCTTCCATTCAATTATCAGGCAAAAGGATGTaGGGGAGTAACCCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: PRPLLFCSSPLEPPSIQLSGKRM*GSNPGE
Trigger: CTCACCAGGGTTACTCCCCAACATCCTTTTGCCTGA...TAATTGAATGGAAGGGGGTTCCAGAGGTGATGAGCAGAAGAGGAGGGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTGAGTCCGGAGTCCTaGTTGTCACTGTGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: QKASITQDLSFSLKLRGSLSPES*LSLCAR
Trigger: GCGGGCGCACAGTGACAACAAGGACTCCGGACTCAG...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GGAACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGGGGTGGAAGGCTTaGTCCAACACTGTTACAACA +
Preference number: 5 (lower is better)
Translates to: GTGSCPWLKRLEGDSGKRMGWKA*SNTVTT
Trigger: TGTTGTAACAGTGTTGGACAAAGCCTTCCACCCCAT...CCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp ACAGGCAGCTGCCCGTGGTTAAAGCGCTTAGAGGGTGACTCAGGCAAAAGGATGTTCCGGGGTTCCATCTaGTTTTTCTCAGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: TGSCPWLKRLEGDSGKRMFRGSI*FFSEWS
Trigger: TGACCACTCTGAGAAAAACAAGATGGAACCCCGGAA...CATCCTTTTGCCTGAGTCACCCTCTAAGCGCTTTAACCACGGGCAGCTGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCAAGGTTCATCTGTCTaGCGGGGGTCAGCTGAACCT +
Preference number: 5 (lower is better)
Translates to: QKASITQDLSFSLKLRGSQGSSV*RGSAEP
Trigger: AGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTG...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCTTCCGGGGTTCCATCTaGTTTTTCTCAGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAFRGSI*FFSEWS
Trigger: TGACCACTCTGAGAAAAACAAGATGGAACCCCGGAA...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCTTCCACTCGTTGAAGTaGAGGTCAGTCAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: QKASITQDLSFSLKLRGSFHSLK*RSVSGL
Trigger: GAGCCCGCTGACTGACCTCAACTTCAACGAGTGGAA...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp CAAAAAGCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCGAGACAGCAGGGGTGTaGACTATCCCTCCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: QKASITQDLSFSLKLRGSETAGV*TIPPPK
Trigger: CTTAGGAGGAGGGATAGTCAACACCCCTGCTGTCTC...GGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS-3UTR CAA 90 bp GCCAGCATCACCCAGGATCTTTCCTTTAGTCTGAAACTTAGGGGTTCCCTAGCCATGGGGTGGAAGGCTTaGTCCAACACTGTTACAACA +
Preference number: 5 (lower is better)
Translates to: ASITQDLSFSLKLRGSLAMGWKA*SNTVTT
Trigger: TGTTGTAACAGTGTTGGACAAAGCCTTCCACCCCAT...GGCTAGGGAACCCCTAAGTTTCAGACTAAAGGAAAGATCCTGGGTGATGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 90 bp TGCACAGAATCAAAGTCCTGCACACACAATGCACATACAGACGCATaGGCATGCATCACAGACATGCAGATACACACATGCACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: CTESKSCTHNAHTDA*ACITDMQIHTCTAD
Trigger: GTCTGCTGTGCATGTGTGTATCTGCATGTCTGTGATGCATGCGCATGCGTCTGTATGTGCATTGTGTGTGCAGGACTTTGATTCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618942.1
ENST00000632947.1
CDS GCA 72 bp CTCGCTACGCTCGTCGTCCGCCTCATCCCCCGCCCCTaGCCGCCGACCGCTAGCGCCCGAGCACACGCTGCG +
Preference number: 6 (lower is better)
Translates to: LATLVVRLIPRP*PPTASARAHAA
Trigger: CGCAGCGTGTGCTCGGGCGCTAGCGGTCGGCGGGCAGGGGCGGGGGATGAGGCGGACGACGAGCGTAGCGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 72 bp GCCGCCGCAGGCGCACGGCGAGCATGTCGTCCGCCGTaGCGCGGAGCCTTAGACGCAGCGCCTCCATGCGCG +
Preference number: 6 (lower is better)
Translates to: AAAGARRACRPP*RGALDAAPPCA
Trigger: CGCGCATGGAGGCGCTGCGTCTAAGGCTCCGCGGCACGGCGGACGACATGCTCGCCGTGCGCCTGCGGCGGC
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 72 bp CGGCGGCGCGCCAGAGTGTCGCAGGGCATGAGGTGGTaGGAGCTGAAGGACGGCCGGCGTGTCAGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: RRRARVSQGMRW*ELKDGRRVRRP
Trigger: GGGGCGCCTGACACGCCGGCCGTCCTTCAGCTCGCACCACCTCATGCCCTGCGACACTCTGGCGCGCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp CCCGCGCCCGCCGCGCCCTCAGTGTCCGTCTCCACGTaGCTCAGCTCGCTACGCTCGTCGTCCGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: PAPAAPSVSVST*LSSLRSSSASS
Trigger: GGATGAGGCGGACGACGAGCGTAGCGAGCTGAGCCACGTGGAGACGGACACTGAGGGCGCGGCGGGCGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp AGGCGGCGGCGCGCCAGAGTGTCGCAGGGCATGAGGTaGTGCGAGCTGAAGGACGGCCGGCGTGTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: RRRRARVSQGMR*CELKDGRRVRR
Trigger: GCGCCTGACACGCCGGCCGTCCTTCAGCTCGCACCACCTCATGCCCTGCGACACTCTGGCGCGCCGCCGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp TTGAGGTCAGTCAGCGGGCTCTGCACCACCACGGTGTaGCGGCGCCAGCTGCTCCGGCGCCGCCGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: LRSVSGLCTTTV*RRQLLRRRRVS
Trigger: CGAGACCCGGCGGCGCCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGACCTCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp GGTCCATGGTGGACAGGGTGGAGTAGCCCGACACAATaGAGCGCGTGTCCGCGGCCGGCCGCTCCTCCGGCG +
Preference number: 6 (lower is better)
Translates to: GPWWTGWSSPTQ*SACPRPAAPPA
Trigger: CGCCGGAGGAGCGGCCGGCCGCGGACACGCGCTCCATTGTGTCGGGCTACTCCACCCTGTCCACCATGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp CGAGTTGGGCAGGCGGGGGTGCGGGCAGACGAACGCTaGGAAGCCCAGCCACACCGCTCAAAGCGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: RVGQAGVRADER*EAQPHRSKRGD
Trigger: GTCACCCCGCTTTGAGCGGTGTGGCTGGGCTTCCCAGCGTTCGTCTGCCCGCACCCCCGCCTGCCCAACTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 72 bp CCAGGGCCCGGGTGCTGGGTTCCGGCCGTACAACCCTaGGTGGCTCGGAGGCCTCTGGTGGGAATGACGCAG +
Preference number: 6 (lower is better)
Translates to: PGPGCWVPAVQP*VARRPLVGMTQ
Trigger: CTGCGTCATTCCCACCAGAGGCCTCCGAGCCACCCAGGGTTGTACGGCCGGAACCCAGCACCCGGGCCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS TCA 72 bp ACGACGGGGCCCGCGCCTTGGTGGACTCCAGGCTGCTaGGTCCGGAGTCCTTGTTGTCACTGTGCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: TTGPAPWWTPGC*VRSPCCHCAPA
Trigger: CGCGGGCGCACAGTGACAACAAGGACTCCGGACTCAGCAGCCTGGAGTCCACCAAGGCGCGGGCCCCGTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS CCA 72 bp CGCCCGAGCACACGCTGCGGTCCATGGTGGACAGGGTaGAGTAGCCCGACACAATGGAGCGCGTGTCCGCGG +
Preference number: 6 (lower is better)
Translates to: RPSTRCGPWWTG*SSPTQWSACPR
Trigger: CCGCGGACACGCGCTCCATTGTGTCGGGCTACTCCACCCTGTCCACCATGGACCGCAGCGTGTGCTCGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS TCA 72 bp CTCGGCAGAACGGGTGGCCCGGCTCAAGTAGTCATCTaGGCGAGCTCGGTGCCAGCCCTCCTGGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LGRTGGPAQVVI*ASSVPALLAQL
Trigger: CAGCTGGGCCAGGAGGGCTGGCACCGAGCTCGCTCAGATGACTACTTGAGCCGGGCCACCCGTTCTGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CAA 72 bp GGCACCGTCTCTCCCCCGCCCGGCGGGGTACCTGGTTaGACAGCCAGTGTGACAAGGCCTGCTGGCACTCCA +
Preference number: 6 (lower is better)
Translates to: GTVSPPPGGVPG*TASVTRPAGTP
Trigger: TGGAGTGCCAGCAGGCCTTGTCACACTGGCTGTCAAACCAGGTACCCCGCCGGGCGGGGGAGAGACGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 72 bp GGGCCACCTTCCTGCCCAGGCGTTCCCCTCGCCCACTaGCCTCTGGCTCTGGGGACTCGTCACCAAATCCAA +
Preference number: 6 (lower is better)
Translates to: GPPSCPGVPLAH*PLALGTRHQIQ
Trigger: TTGGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAACGCCTGGGCAGGAAGGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CAA 72 bp GGGCCCCCTCCGCCCAGCTCCTTCCACTCGTTGAAGTaGAGGTCAGTCAGCGGGCTCTGCACCACCACGGTG +
Preference number: 6 (lower is better)
Translates to: GPPPPSSFHSLK*RSVSGLCTTTV
Trigger: CACCGTGGTGGTGCAGAGCCCGCTGACTGACCTCAACTTCAACGAGTGGAAGGAGCTGGGCGGAGGGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS GCA 72 bp TTCCACTCGTTGAAGTTGAGGTCAGTCAGCGGGCTCTaGACCACCACGGTGTGGCGGCGCCAGCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: FHSLKLRSVSGL*TTTVWRRQLLR
Trigger: CCGGAGCAGCTGGCGCCGCCACACCGTGGTGGTGCAGAGCCCGCTGACTGACCTCAACTTCAACGAGTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610551.2
ENST00000622683.5
CDS TCA 72 bp TACAACCCTGGGTGGCTCGGAGGCCTCTGGTGGGAATaGCGCAGGGGACTGGGCCAGGTTGAAGGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: YNPGWLGGLWWE*RRGLGQVEGRQ
Trigger: CTGCCTACCTTCAACCTGGCCCAGTCCCCTGCGTCATTCCCACCAGAGGCCTCCGAGCCACCCAGGGTTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS GCA 72 bp CAAGGTTCATCTGTCTTGCGGGGGTCAGCTGAACCTTaGGGCCCGTCGGGGGCTTCTGCCTCAGGACCACCT +
Preference number: 6 (lower is better)
Translates to: QGSSVLRGSAEP*GPSGASASGPP
Trigger: AGGTGGTCCTGAGGCAGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS TCA 72 bp CCAAATCCAAGGTTCATCTGTCTTGCGGGGGTCAGCTaGACCTTGCGGCCCGTCGGGGGCTTCTGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: PNPRFICLAGVS*TLRPVGGFCLR
Trigger: CCTGAGGCAGAAGCCCCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTGGATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 72 bp GCCCAGGCGTTCCCCTCGCCCACTGGCCTCTGGCTCTaGGGACTCGTCACCAAATCCAAGGTTCATCTGTCT +
Preference number: 6 (lower is better)
Translates to: AQAFPSPTGLWL*GLVTKSKVHLS
Trigger: AGACAGATGAACCTTGGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAACGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 72 bp CTTCCTGCCCAGGCGTTCCCCTCGCCCACTGGCCTCTaGCTCTGGGGACTCGTCACCAAATCCAAGGTTCAT +
Preference number: 6 (lower is better)
Translates to: LPAQAFPSPTGL*LWGLVTKSKVH
Trigger: ATGAACCTTGGATTTGGTGACGAGTCCCCAGAGCCAGAGGCCAGTGGGCGAGGGGAACGCCTGGGCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CAA 72 bp CTGGGGACTCGTCACCAAATCCAAGGTTCATCTGTCTaGCGGGGGTCAGCTGAACCTTGCGGCCCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: LGTRHQIQGSSV*RGSAEPCGPSG
Trigger: CCCCGACGGGCCGCAAGGTTCAGCTGACCCCCGCAAGACAGATGAACCTTGGATTTGGTGACGAGTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610551.2
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
CDS CCA 72 bp ACGATGAAGTGGCGCAGAGTGAAGCCAAAGCCGTCCTaGGGACTTTTGTACAGCAGCAGCGTCCTCGGCCCC +
Preference number: 6 (lower is better)
Translates to: TMKWRRVKPKPS*GLLYSSSVLGP
Trigger: GGGGCCGAGGACGCTGCTGCTGTACAAAAGTCCCCAGGACGGCTTTGGCTTCACTCTGCGCCACTTCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS CCA 72 bp TTCCTCCTTCAGGCTGCAGTGCACGGCCGACTCGGGTaGGTACACGATGAAGTGGCGCAGAGTGAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: FLLQAAVHGRLG*VHDEVAQSEAK
Trigger: TTTGGCTTCACTCTGCGCCACTTCATCGTGTACCCACCCGAGTCGGCCGTGCACTGCAGCCTGAAGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS CCA 72 bp TTTACCAGCCGGTCTCCTGTGCGAAGCCCCGCCCTATaGGCAGGGCCGTCTTCCTTCACATTCTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: FTSRSPVRSPAL*AGPSSFTFLTK
Trigger: CTTTGTCAAGAATGTGAAGGAAGACGGCCCTGCCCATAGGGCGGGGCTTCGCACAGGAGACCGGCTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000610551.2
ENST00000618942.1
ENST00000620417.4
ENST00000622683.5
ENST00000631799.1
ENST00000632947.1
ENST00000633445.1
CDS GCA 72 bp TCCTGCCCAGGAAGTGCCTGTCGTTGTCTTAGCTCATaGACAATCTCACACACACACATGCACACATATATG +
Preference number: 6 (lower is better)
Translates to: SCPGSACRCLSS*TISHTHMHTYM
Trigger: CATATATGTGTGCATGTGTGTGTGTGAGATTGTGCATGAGCTAAGACAACGACAGGCACTTCCTGGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618942.1
ENST00000632947.1