Pregenerated sensors for ARHGAP22-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000248682

Ensembl transcript IDs: ENST00000505718.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCAGACTCAGGGGCTGTGGGTGGAGTCCTAGCTGGCCCGCTGACATaGTGTGTGGCCTTAGTCAAGTCATTTAGTCTCTTTGGACTAAAA	+
Preference number: 5 (lower is better) Translates to: PDSGAVGGVLAGPLT*CVALVKSFSLFGLK Trigger: TTTTAGTCCAAAGAGACTAAATGACTTGACTAAGGCCACACAGCATGTCAGCGGGCCAGCTAGGACTCCACCCACAGCCCCTGAGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS TCA 90 bp	TTTGTGTGCAGAACTTGTGCTCAAGTCACACAGACTAAACTAAAATaGAGTGAGGCAGCCTTGCTCAGAGCCAAGAGCACAGGGATCCCC	+
Preference number: 5 (lower is better) Translates to: FVCRTCAQVTQTKLK*SEAALLRAKSTGIP Trigger: GGGGATCCCTGTGCTCTTGGCTCTGAGCAAGGCTGCCTCACTTCATTTTAGTTTAGTCTGTGTGACTTGAGCACAAGTTCTGCACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS TCA 90 bp	TCCACCTCCACCATTTCAAAGGAAGGAAGGGATAGCACTGCTCTGTaGGTGCTATTAGTGGCCTTGCACAGTTTTGTGTGCAGAACTTGT	+
Preference number: 5 (lower is better) Translates to: STSTISKEGRDSTAL*VLLVALHSFVCRTC Trigger: ACAAGTTCTGCACACAAAACTGTGCAAGGCCACTAATAGCACTCACAGAGCAGTGCTATCCCTTCCTTCCTTTGAAATGGTGGAGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS CCA 72 bp	ATCCCCAGACTCAGGGGCTGTGGGTGGAGTCCTAGCTaGCCCGCTGACATGCTGTGTGGCCTTAGTCAAGTC	+
Preference number: 6 (lower is better) Translates to: IPRLRGCGWSPS*PADMLCGLSQV Trigger: GACTTGACTAAGGCCACACAGCATGTCAGCGGGCCAGCTAGGACTCCACCCACAGCCCCTGAGTCTGGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS GCA 72 bp	GGGGCTGTGGGTGGAGTCCTAGCTGGCCCGCTGACATaGTGTGTGGCCTTAGTCAAGTCATTTAGTCTCTTT	+
Preference number: 6 (lower is better) Translates to: GAVGGVLAGPLT*CVALVKSFSLF Trigger: AAAGAGACTAAATGACTTGACTAAGGCCACACAGCATGTCAGCGGGCCAGCTAGGACTCCACCCACAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS CAA 72 bp	CTCCAACCCCTCCGAGGCTGTATGTTACATCTCTCCTaGCTCCAAGGTTCAGGGACTCTCTGCTTCCAGAAG	+
Preference number: 6 (lower is better) Translates to: LQPLRGCMLHLS*LQGSGTLCFQK Trigger: CTTCTGGAAGCAGAGAGTCCCTGAACCTTGGAGCAAGGAGAGATGTAACATACAGCCTCGGAGGGGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS CAA 72 bp	AGGGCTCGGCTTCCTCCCTGCACCCTCATCCTTGTCTaGAGTAACTCTTGTATGTACTGTCTCCACCTCCAC	+
Preference number: 6 (lower is better) Translates to: RARLPPCTLILV*SNSCMYCLHLH Trigger: GTGGAGGTGGAGACAGTACATACAAGAGTTACTCAAGACAAGGATGAGGGTGCAGGGAGGAAGCCGAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS CAA 90 bp	GGACCTCTCCTCCAACCCCTCCGAGGCTGTATGTTACATCTCTCCTaGCTCCAAGGTTCAGGGACTCTCTGCTTCCAGAAGTTGTTGATG	+
Preference number: 6 (lower is better) Translates to: GPLLQPLRGCMLHLS*LQGSGTLCFQKLLM Trigger: CATCAACAACTTCTGGAAGCAGAGAGTCCCTGAACCTTGGAGCAAGGAGAGATGTAACATACAGCCTCGGAGGGGTTGGAGGAGAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1
CDS TCA 72 bp	AGAACTTGTGCTCAAGTCACACAGACTAAACTAAAATaGAGTGAGGCAGCCTTGCTCAGAGCCAAGAGCACA	+
Preference number: 6 (lower is better) Translates to: RTCAQVTQTKLK*SEAALLRAKST Trigger: TGTGCTCTTGGCTCTGAGCAAGGCTGCCTCACTTCATTTTAGTTTAGTCTGTGTGACTTGAGCACAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505718.1