RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP22 (Homo sapiens)

Ensembl gene IDs: ENSG00000128805

Ensembl transcript IDs: ENST00000249601.9, ENST00000374170.5, ENST00000374172.5, ENST00000417247.6, ENST00000417912.6, ENST00000435790.6, ENST00000460425.1, ENST00000464445.1, ENST00000471013.5, ENST00000477708.6, ENST00000489984.1, ENST00000491108.1, ENST00000493012.2, ENST00000511570.1, ENST00000515523.5

Found 779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCGGAGCGGCGCGCGTGTTCCCGGGTGGGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGT +
Preference number: 1 (lower is better)
Translates to: PRSGARVPGWGCPAR*ARCCWHPRPPRPCC
Trigger: ACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGCGCCGCTCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 90 bp GCGCGTGTTCCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: ARVPGWGCPARWARC*WHPRPPRPCCGPGP
Trigger: TGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 90 bp CGTGTTCCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: RVPGWGCPARWARCC*HPRPPRPCCGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 90 bp AGGGACCTCGGCTGCCGGAAGGAGGACTTCCAACTGGGCAGGGTCTaGACCTTCTTCCCAGGGCTGCACCGGCTCCCCGGCCCCGTGGGG +
Preference number: 1 (lower is better)
Translates to: RDLGCRKEDFQLGRV*TFFPGLHRLPGPVG
Trigger: CCCCACGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGGTGCAGACCCTGCCCAGTTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 90 bp CGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCGCGGGCACATTGTCGTAGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: RWTRPRTTPYWPRWV*RGPGPARAHCRRWR
Trigger: TCTCCACCTACGACAATGTGCCCGCGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 90 bp GCTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGGACTTGGGGTCCTCGCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: ARWARCCWHPRPPRP*CGPGPGTWGPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 90 bp ACGACTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGCCCGGCGCGGGCACATTGTCGTAGG +
Preference number: 1 (lower is better)
Translates to: TTRWTRPRTTPYWPR*VCRGPGPARAHCRR
Trigger: CCTACGACAATGTGCCCGCGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAGTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 90 bp CTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTGGGGTCCTCGCTGCTGCTGGGGAGC +
Preference number: 1 (lower is better)
Translates to: LGSLLLAPAPASSML*SRSRDLGSSLLLGS
Trigger: GCTCCCCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR TCA 90 bp GCACATTGTCGTAGGTGGAGAGTCTCTGCACGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGG +
Preference number: 1 (lower is better)
Translates to: AHCRRWRVSARSPSP*AGLPTRPGGVRAGR
Trigger: CCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 90 bp CCGCGCGGGGAGGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGG +
Preference number: 1 (lower is better)
Translates to: PRGEVGPSGTGAVKS*LCLRMRTVIRCWTR
Trigger: CCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACCTCCCCGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 90 bp AAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTaGATGGTTGGAGCAGCATCTGATCCCACCTGGAGTGTGTGGGGT +
Preference number: 1 (lower is better)
Translates to: KRYSWYRPLLTLTRN*MVGAASDPTWSVWG
Trigger: ACCCCACACACTCCAGGTGGGATCAGATGCTGCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR CCA 90 bp GTGGCCATGAAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGA +
Preference number: 1 (lower is better)
Translates to: VAMKDISWVRAKRYS*YRPLLTLTRNCMVG
Trigger: TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCATGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR CCA 90 bp GACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTCTGGAC +
Preference number: 1 (lower is better)
Translates to: DEGSAFHDGYWVLYL*PQNVRSKNGCQILD
Trigger: GTCCAGAATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR TCA 90 bp TCCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTaGGTATGCCTGAACTTCATCCAGAAACTTGCAGATGTATCTGAG +
Preference number: 1 (lower is better)
Translates to: SKNGCQILDTHLVDI*VCLNFIQKLADVSE
Trigger: CTCAGATACATCTGCAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CAA 90 bp CGCGCGTGTTCCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: RACSRVGLSGSLGSL*LAPAPASSMLWSRS
Trigger: GGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp GGGCTCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 2 (lower is better)
Translates to: GLQGPVGVQGTAGRRVAGWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...GCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SLCTEPESLSRSPDEARRLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: AQSVCRELRADESLARQAPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CCA 90 bp AGCTCGGCCCTGAGCTCAGTGACCAGCCCCTGTAAGGCCTCGGAGCGGCGCGCGCCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 2 (lower is better)
Translates to: SSALSSVTSPCKASERRAPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...CGCGCGCCGCTCCGAGGCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp GCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTGGGAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: AGTRARLVHAVVQVQGLGRAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...CCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CCA 90 bp TCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCGTGCAGCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: SVCRELRADESLARQAVQPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...CTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp AGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: SRSPDEARRCPRREDSPFGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...GAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: AQSVCRELRADESLARQAFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CAA 90 bp GAGGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: EVGPSGTGAVKSWLC*RMRTVIRCWTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 2 (lower is better)
Translates to: AQSVCRELRADESLARQATFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 2 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSLSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNLSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 2 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGATCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 2 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGSRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 2 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERNSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR-3UTR TCA 90 bp TCTTTTCACACTCCTCTCGTACTCAGTCCGCTGGCGGCACAGCTCGGCCCTGAGCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 2 (lower is better)
Translates to: SFHTPLVLSPLAAQLGPEHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...CTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR GCA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATAGGTCCAAAAACGGTTaGCAGATTCTGGACACTCAT +
Preference number: 2 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHRSKNG*QILDTH
Trigger: ATGAGTGTCCAGAATCTGGCAACCGTTTTTGGACCT...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 2 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 2 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLNSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTAACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 2 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLTVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR TCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTACTTGCAGATGTATCTaGGCAGGTTGTAATTTGCCT +
Preference number: 2 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLTCRCI*AGCNLP
Trigger: AGGCAAATTACAACCTGCTCAGATACATCTGCAAGT...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp GGCGCGCGTGTTCCCGGGTGGGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGT +
Preference number: 3 (lower is better)
Translates to: GARVPGWGCPAR*ARCCWHPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 72 bp CCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: PGWGCPARWARC*WHPRPPRPCCG
Trigger: ACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp TGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGCCCGGCGCGGGCACAT +
Preference number: 3 (lower is better)
Translates to: WTRPRTTPYWPR*VCRGPGPARAH
Trigger: ATGTGCCCGCGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp GGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: GWGCPARWARCC*HPRPPRPCCGP
Trigger: TGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp CCTGTAAGGCCTCGGAGCGGCGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: PVRPRSGARVPG*GCPARWARCCW
Trigger: CCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGCGCCGCTCCGAGGCCTTACAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 72 bp AGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCGCGGGCACATTGTCGT +
Preference number: 3 (lower is better)
Translates to: RPRTTPYWPRWV*RGPGPARAHCR
Trigger: ACGACAATGTGCCCGCGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CAA 90 bp GGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 3 (lower is better)
Translates to: GSLLLAPAPASSMLWSRSTEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...GGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR TCA 72 bp CGTAGGTGGAGAGTCTCTGCACGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGC +
Preference number: 3 (lower is better)
Translates to: RRWRVSARSPSP*AGLPTRPGGVR
Trigger: GCGGACACCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACTCTCCACCTACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 72 bp GCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGGACTTGGGGTCCTCGC +
Preference number: 3 (lower is better)
Translates to: ARCCWHPRPPRP*CGPGPGTWGPR
Trigger: GCGAGGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp CCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGGGGAGCGGGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: PPRPCCGPGPGT*GPRCCWGAGRA
Trigger: AGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp CTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTGGGGTCCTCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LLLAPAPASSML*SRSRDLGSSLL
Trigger: CAGCAGCGAGGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CAA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 3 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp TCGATTCTTTTCACACTCCTCTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTGAGCTCAGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: SILFTLLSYSVR*RHSSALSSVTS
Trigger: GCTGGTCACTGAGCTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGAATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR-3UTR CAA 90 bp AGCCCGTTCATAAGCCAGTTCCCGCCGGAGGAGATGATGGGCACCTCCAGGGATAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 3 (lower is better)
Translates to: SPFISQFPPEEMMGTSRDKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...ATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGAACTGGCTTATGAACGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp TCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGA +
Preference number: 3 (lower is better)
Translates to: SPQRYQDLSLSS*LQSAWLLQRYR
Trigger: TCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
3UTR CCA 72 bp GTGCTGGACGAGGGAAGTGCCTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCC +
Preference number: 3 (lower is better)
Translates to: VLDEGSAFHDGY*VLYLWPQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp TGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCCATGATGGTTACTGGG +
Preference number: 3 (lower is better)
Translates to: WLCLRMRTVIRC*TREVPSMMVTG
Trigger: CCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR GCA 72 bp AGCTGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCTTCCATGATGGTTACT +
Preference number: 3 (lower is better)
Translates to: SWLCLRMRTVIR*WTREVPSMMVT
Trigger: AGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp AAGAAAGCTGACTGTTCCCGGTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTGGCCATGAAGGATATT +
Preference number: 3 (lower is better)
Translates to: KKADCSRWLPGS*APSISVAMKDI
Trigger: AATATCCTTCATGGCCACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGTCAGCTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR-3UTR CAA 90 bp AGCCCGTTCATAAGCCAGTTCCCGCCGGAGGAGATGATGGGCACCTCCAGGGATACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: SPFISQFPPEEMMGTSRDTSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...ATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGAACTGGCTTATGAACGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CCA 72 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACCCTCACCAGGAACTGC +
Preference number: 3 (lower is better)
Translates to: KDISWVRAKRYS*YRPLLTLTRNC
Trigger: GCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
3UTR CCA 72 bp AGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: SAFHDGYWVLYL*PQNVRSKNGCQ
Trigger: CTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR TCA 72 bp GGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTaGGTATGCCTGAACTTCATCCAGAAACTTGCAGAT +
Preference number: 3 (lower is better)
Translates to: GCQILDTHLVDI*VCLNFIQKLAD
Trigger: ATCTGCAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp CCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCCGGCGGCAGCTCTTaGGCTCCCGGCCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGWGCPARWARCCWHPRPPGGSS*APGPLL
Trigger: AAGGAGCGGGCCGGGAGCTCAAGAGCTGCCGCCGGG...CGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGWGCPARWARCCWHPRPGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...CGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
3UTR CAA 72 bp TCCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRVGLSGSLGSL*LAPAPASSMLW
Trigger: CCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CCCGGGTGGGGCTGTCCGGCTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGWGCPARWARCCWHPRPQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...CGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCCCCACCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp AGCTCGGCCCTGAGCTCAGTGACCAGCCCCTGTAAGGCCTCGGAGCGGCGCGCGCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSALSSVTSPCKASERRAPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...CGCGCGCCGCTCCGAGGCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: AQSVCRELRADESLARQAPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGGCTCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLQGPVGVQGTAGRRVAGARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...GCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGAGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTGGGCCCGTCCCTCGGGCGTaGCAGTGGCCTGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: AGTRARLVHAVVQVQGLGPVPRA*QWPGHV
Trigger: CACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGG...CCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGCGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQSVCRELRADESLARQARPPRP*CGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCG...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGAGCGGGCGGGGCTaGTCACCTGGAACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LAGLAVAGTRARLVHAVVQSGRG*SPGTRA
Trigger: GGCCCTGGTTCCAGGTGAGCAGCCCCGCCCGCTCTG...GACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCAGTGGCCTGGCCACGTaGGCCCCAGGGCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: LAGLAVAGTRARLVHAVVSGLAT*APGLAP
Trigger: GGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACT...GACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGCAGGCCAGTGCACCCTaGCCGGGCGTCACCCCACCA +
Preference number: 4 (lower is better)
Translates to: SLCTEPESLSRSPDEARRQASAP*PGVTPP
Trigger: TGGTGGGGTGACGCCCGGGCAGGGTGCACTGGCCTG...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGCCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLCTEPESLSRSPDEARRWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp TCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGGGCAGCGCCCCGAGGTaGGCATCACGGTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: SRAQSVCRELRADESLARGSAPR*ASRWDW
Trigger: CCAATCCCACCGTGATGCCCACCTCGGGGCGCTGCC...CCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp CGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCATATCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RSPDEARRCPRREDSPFISRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...TATGAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp AGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SRSPDEARRCPRREDSPFMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...GAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp AGCTCGGCCCTGAGCTCAGTGACCAGCCCCTGTAAGGCCTCGGAGCGGCGCGCGCGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSALSSVTSPCKASERRARCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...CGCGCGCCGCTCCGAGGCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQSVCRELRADESLARQAKEVLP*VLGARR
Trigger: CCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTT...GGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCGGTCCCTCACCAGGTTaGCCTGGCCTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: GSLLLAPAPASSMLWSRSGPSPG*PGLACG
Trigger: TCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACC...GGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGCTCGGCCCTGAGCTCAGTGACCAGCCCCTGTAAGGCCTCGGAGCGGCGCGCGCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSALSSVTSPCKASERRAPGPGT*GPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGG...CGCGCGCCGCTCCGAGGCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLCTEPESLSRSPDEARRSYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCCTAAGCGGGCACAGCTaGGCACAGTTCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLLLAPAPASSMLWSRSLSGHS*AQFPGP
Trigger: AGGCCCCGGGAACTGTGCCCAGCTGTGCCCGCTTAG...GGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GAGGACTTCCAACTGGGCAGGGTCTGCACCTTCTTCCCAGGGCTGCACCGGCTCACGGGGCCCAGCCTGTaGGGGCACGGCATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EDFQLGRVCTFFPGLHRLTGPSL*GHGIRP
Trigger: TGGGCGGATGCCGTGCCCTCACAGGCTGGGCCCCGT...GAGCCGGTGCAGCCCTGGGAAGAAGGTGCAGACCCTGCCCAGTTGGAAGTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CGACTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: RLAGRGPGPRHTGHAGYARTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGCTCGGCCCTGAGCTCAGTGACCAGCCCCTGTAAGGCCTCGGAGCGGCGCGCGTCACACGCATTAGCCTaGCACCTGGCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSALSSVTSPCKASERRASHALA*HLAAPR
Trigger: TCGGGGCGCTGCCAGGTGCCAGGCTAATGCGTGTGA...CGCGCGCCGCTCCGAGGCCTTACAGGGGCTGGTCACTGAGCTCAGGGCCGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAACTCCAGAGTGCCCTaGCGAAGGGGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: GSLLLAPAPASSMLWSRSNSRVP*RRGPRA
Trigger: AGCCCGTGGTCCCCTTCGCCAGGGCACTCTGGAGTT...GGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGACGCTCGTCTTGGAATaGCTCAGCCAGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLCTEPESLSRSPDEARRTLVLE*LSQEQP
Trigger: CGGCTGCTCCTGGCTGAGTCATTCCAAGACGAGCGT...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp GGGCTCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GLQGPVGVQGTAGRRVAGVSSRR*PKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...GCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGCCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GGPFRDRCREELAVFADEPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...CTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCACGGGGCCCAGCCTGTaGGGGCACGGCATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSATGPSL*GHGIRP
Trigger: TGGGCGGATGCCGTGCCCTCACAGGCTGGGCCCCGT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCACGGGGCCCAGCCTGTaGGGGCACGGCATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCTGPSL*GHGIRP
Trigger: TGGGCGGATGCCGTGCCCTCACAGGCTGGGCCCCGT...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp TCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCGTGCAGCTGATCTCAAAGAGGTaGTTCCCTGGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SVCRELRADESLARQAVQLISKR*FPGSSG
Trigger: CCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAG...CTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCATTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGLPTRPGGVRAGRTARSFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...TGAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGACTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: RLAGRGPGPRHTGHAGYAASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...GGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPELGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGACTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCCAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RLAGRGPGPRHTGHAGYAQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...GGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGATGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCTCGGCTACCTCTCCTaGCTCCGGACGGACGGCTCG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSALGYLS*LRTDGS
Trigger: CGAGCCGTCCGTCCGGAGCCAGGAGAGGTAGCCGAG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACTCGTTCGGGGCCCCGTaGCCGCTGGCGTCACCCGTC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYSFGAP*PLASPV
Trigger: GACGGGTGACGCCAGCGGCCACGGGGCCCCGAACGA...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp GCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTGGGGTCCCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: APAPASSMLWSRSRDLGSPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...GGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCACCGACGACTCGCTaGACGAGGCCCCGGACCACG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPPTTR*TRPRTT
Trigger: CGTGGTCCGGGGCCTCGTCCAGCGAGTCGTCGGTGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTGCTGGACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCTGCCGGGCAGCGCTaGGAAGGGCGGCAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: VLDEGSAFHDGYWVLYLWPAGQR*EGRQRA
Trigger: CGCTCTCTGCCGCCCTTCCCAGCGCTGCCCGGCAGG...CCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGCAGCTGGGCGCAGCTaGGGAAGTCCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSAAGRS*GSPRTW
Trigger: CCAGGTACGAGGACTTCCTCAGCTGCGCCCAGCTGC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGCAGCTGGGCGCAGCTaGGGAAGTCCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAAAGRS*GSPRTW
Trigger: CCAGGTACGAGGACTTCCTCAGCTGCGCCCAGCTGC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCAGCTGGGCGCAGCTaGGGAAGTCCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAAAGRS*GSPRTW
Trigger: CCAGGTACGAGGACTTCCTCAGCTGCGCCCAGCTGC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCTTTTCACACTCCTCTCGTACTCAGTCCGCTGGCGGCACAGCTCGGCCCTGAGCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SFHTPLVLSPLAAQLGPEPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...CTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCTCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSSRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCSRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CTCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGCACGGACATTCACAATaGCAGTCAGCACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQGPVGVQGTAGRRVAGAHGHSQ*QSALLS
Trigger: GCTGAGAAGTGCTGACTGTCATTGTGAATGTCCGTG...CGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGGCTCAGCATGTTCTTaGAGCCGTCCGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCGSACS*SRPASP
Trigger: GGGGCTGGCCGGACGGCTGCAAGAACATGCTGAGCC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR GCA 90 bp GGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPFRDRCREELAVFADERTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...CTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCCTTCTTCCCAGGGCTaGACCGGCTCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKPSSQG*TGSPAP
Trigger: CGGGGCCGGGGAGCCGGTGCAGCCCTGGGAAGAAGG...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGTGGCCACGCTGGGTATaGCGGGGACCAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKWPRWV*RGPGPA
Trigger: CGCCGGGCCTGGTCCCCGGCATACCCAGCGTGGCCA...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSRCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPERCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPERAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNRPPRP*CGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPRPPRP*CGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCG...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGAGGCACTCCTCCACTaGAGGGCTGCGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPEALLH*RAAATR
Trigger: CCGAGTGGCCGCAGCCCTGCAGTGGAGGAGTGCCTC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGGAGAAGGGCCTTGCTaGCAGCCACTCGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNGEGPC*QPLGPG
Trigger: GCCTGGGCCGAGTGGCTGGCAGCAAGGCCCTTCTCC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGGCGGAGAAGGGCCTTaGTGCCAGCCACTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTGGEGP*CQPLGP
Trigger: TGGGCCGAGTGGCTGGCAGCAAGGCCCTTCTCCGCC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACCCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGGGCAGACGAGTCGCTaGCGCGGCAGGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAGQTSR*RGRPCS
Trigger: GCTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEPGPGT*GPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGATGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGGGCTCGCTGTTGCTaGCACCCGCGCCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNWARCC*HPRPPR
Trigger: ACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCA...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCGCGTGTTCCCGGGTaGGGCTGTCCGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQARVPG*GCPARW
Trigger: CCAGCGAGCCGGACAGCCCCACCCGGGAACACGCGC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCSYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSASYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGCTGACTGTTCCCGGTaGCTGCCTGGATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCADCSR*LPGSWA
Trigger: CGCCCAGGATCCAGGCAGCCACCGGGAACAGTCAGC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCCGGCACCACCCCTaGGCATACGCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERPRHHP*AYACSS
Trigger: AGAGGAGCAGGCGTATGCCCAGGGGTGGTGCCGGGG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR CCA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGCTTCTCAGCACACTGTaGATCACACGCATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLCTEPESLSRSPDEARRLLSTL*ITRISL
Trigger: CAGGCTAATGCGTGTGATCCACAGTGTGCTGAGAAG...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp TGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTGCGCGCCGTGGGAGCTaGAGAGGCCAGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WLCLRMRTVIRCWTREVPARRGS*RGQVFW
Trigger: CCAGAAGACCTGGCCTCTCCAGCTCCCACGGCGCGC...AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAACCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGTCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWSRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPSRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGTCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPESRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAACGGAGCCCGAGTCCTTaGGCCGGTCTCCCGACGAGG +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQRSPSP*AGLPTR
Trigger: CCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCG...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCGGGCCCTCCTGGCCTaGCTGATCTTTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNRALLA*LIFGLS
Trigger: GCTGAGCCCAAAGATCAGGCAGGCCAGGAGGGCCCG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERRCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAARCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPRAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACTGTTCCCGGTGGCTaGCTGGATCCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATVPGG*LDPGRP
Trigger: AGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAACTGTTCCCGGTGGCTaGCTGGATCCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPTVPGG*LDPGRP
Trigger: AGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGTCCCCTCCAGTCCTTaGAGCAGCACAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSVPSSP*SSTAPW
Trigger: CCATGGGGCTGTGCTGCTGCAAGGACTGGAGGGGAC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACCTCCACTGCAGGGCTaGGGCCACTCGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGPPLQG*GHSAAC
Trigger: ACAGGCAGCCGAGTGGCCGCAGCCCTGCAGTGGAGG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEKEVLP*VLGARR
Trigger: CCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGTACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GGPFRDRCREELAVFADEYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...CTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSQVGLA*HAEQPL
Trigger: GAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCTTTTCACACTCCTCTCGTACTCAGTCCGCTGGCGGCACAGCTCGGCCCTGAGCTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SFHTPLVLSPLAAQLGPELTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...CTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGGTCCCTCACCAGGTTaGCCTGGCCTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSGPSPG*PGLACG
Trigger: TCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACC...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACCGCCGGGCTCTCCTTaGCTGTCCCTGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGPPGSP*LSLVTS
Trigger: GGAGGTCACCAGGGACAGCCAAGGAGAGCCCGGCGG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAACCGTGGGGGCTGTTCTaGAGAGCACCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQPWGLF*RAPPRP
Trigger: CGGCCGTGGCGGTGCTCTCCAGAACAGCCCCCACGG...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGTGGGCCCTTCCGGGACCGGTGCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GGPFRDRCREELAVFADEAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...CTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGGTCCTCGCTGCTGCTaGGGAGCGGGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAGPRCC*GAGRAP
Trigger: TGGAGCCCTCCCCGCTCCCCAGCAGCAGCGAGGACC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNPGPGT*GPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQPGPGT*GPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGGTCCAGGGACTTaGGGTCCTCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPGPGT*GPRCCW
Trigger: CCAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERSYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPSYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPSYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGCTGACTGTTCCCGGTaGCTGCCTGGATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQADCSR*LPGSWA
Trigger: CGCCCAGGATCCAGGCAGCCACCGGGAACAGTCAGC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTGCTGGACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCAGCCGCCAGCAGCATaGGCCACGCAGCAAACGGGC +
Preference number: 4 (lower is better)
Translates to: VLDEGSAFHDGYWVLYLWQPPAA*ATQQTG
Trigger: GCCCGTTTGCTGCGTGGCCCATGCTGCTGGCGGCTG...CCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCAGGACAGCAGGATaGGGCCGCAGAACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPGRTAG*GRRTAF
Trigger: GAAGGCGGTTCTGCGGCCCCATCCTGCTGTCCTGCC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCAGCTTCGTGGGAGCTaGCCCTGTCCCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSQLRGS*PCPQSQ
Trigger: CTGGCTCTGGGGACAGGGCCAGCTCCCACGAAGCTG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCGGCACCACCTGGGCTaGTCTCAAAGAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSARHHLG*SQRGAS
Trigger: GGAAGCACCTCTTTGAGATCAGCCCAGGTGGTGCCG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR TCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTCCCGCCGGAGGAGATaGTGGGCACCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNSRRRR*WAPPGM
Trigger: CATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGA...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCCAGGGCTCCGGCTCTaGTCCCCCATCACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSPGLRL*SPITRL
Trigger: AAGCCTAGTGATGGGGGAGCAGAGCCGGAGCCCTGG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACCAGGGCTCCGGCTCTaGTCCCCCATCACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPPGLRL*SPITRL
Trigger: AAGCCTAGTGATGGGGGAGCAGAGCCGGAGCCCTGG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp CTCGCTGGGCTCGCTGTTGCTGGCACCCGCGCCCGCCTCGTCCATGCTGTGGTCAGGTCCAAAAACGGTTaGCAGATTCTGGACACTCAT +
Preference number: 4 (lower is better)
Translates to: LAGLAVAGTRARLVHAVVRSKNG*QILDTH
Trigger: ATGAGTGTCCAGAATCTGGCAACCGTTTTTGGACCT...GACCACAGCATGGACGAGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSRAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKRPPRP*CGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCG...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAACTGTTCCCGGTGGCTaGCTGGATCCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGTVPGG*LDPGRP
Trigger: AGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGT...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACACTGTTCCCGGTGGCTaGCTGGATCCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYTVPGG*LDPGRP
Trigger: AGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCTGCGGCCACTCGGCTaGCTGTGTGCTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSLRPLG*LCALPV
Trigger: CACAGGCAGAGCACACAGGCAGCCGAGTGGCCGCAG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAAGGGAGGAAGCACTGTaGCTGCGCTCACGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPREEAL*LRSRPP
Trigger: TGGAGGGCGTGAGCGCAGGCACAGTGCTTCCTCCCT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGCCCAGGCTCGCTCTaGCAGTCATGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGPGSL*QSWRSC
Trigger: GCAGCTTCTCCATGACTGGCAGAGCGAGCCTGGGCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGCTGGACGAGGGAAGTaGCTGCCGGGAAGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSAGRGK*LPGREA
Trigger: CGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTKEVLP*VLGARR
Trigger: CCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTT...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000374172.5
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQKEVLP*VLGARR
Trigger: CCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTT...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR CCA 90 bp TCTTTTCACACTCCTCTCGTACTCAGTCCGCTGGCGGCACAGCTCGGCCCTGAGCTCCCCGGCACCACCTaGGCTGATCTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFHTPLVLSPLAAQLGPELPGTT*ADLKEV
Trigger: CACCTCTTTGAGATCAGCCCAGGTGGTGCCGGGGAG...CTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERLTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTLTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPLTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGGTCCCTCACCAGGTTaGCCTGGCCTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYGPSPG*PGLACG
Trigger: TCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGGAAGTCCTCGTACCTaGCGAAGGGGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWGSPRT*RRGPRA
Trigger: AGCCCGTGGTCCCCTTCGCCAGGTACGAGGACTTCC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGAAGTCCTCGTACCTaGCGAAGGGGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGSPRT*RRGPRA
Trigger: AGCCCGTGGTCCCCTTCGCCAGGTACGAGGACTTCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GGGACCGGTGCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGGACGGTCATCAGGACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTGAVKSWLCLRMRTVIRTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...CCTGATGACCGTCCTCATCCGCAAACACAGCCAGCTCTTCACGGCACCGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCGGACCACGCCATACTaGCCACGCTGGGTATGCCGG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSRTTPY*PRWVCR
Trigger: CCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWLSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPELSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGCTGACTGTTCCCGGTaGCTGCCTGGATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYADCSR*LPGSWA
Trigger: CGCCCAGGATCCAGGCAGCCACCGGGAACAGTCAGC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCGGCACCACCTGGGCTaGTCTCAAAGAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSRHHLG*SQRGAS
Trigger: GGAAGCACCTCTTTGAGATCAGCCCAGGTGGTGCCG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR TCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTACCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLPAGPR*LGGWPA
Trigger: TGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGG...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCGTGCAGGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SVCRELRADESLARQAVQGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...CTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCCGGGACCGGTGCCGTaGAGAGCTGGCTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAPGPVP*RAGCVC
Trigger: GCAAACACAGCCAGCTCTTCACGGCACCGGTCCCGG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWVSSRR*PKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPVSSRR*PKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCRTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCCCTTCCGGGACCGGTaGCGTGAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAPFRDR*REELAV
Trigger: CACAGCCAGCTCTTCACGGCACCGGTCCCGGAAGGG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAACGGTGTGCAGGGAACTaGGGGCAGACGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQRCAGN*GQTSRW
Trigger: CCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCG...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQRAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGCCCTGGCACCTTTTaGCCCAACAGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAGPGTF*PNSQAS
Trigger: GGAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCTCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSSRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSASRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAACTGTTCCCGGTGGCTaGCTGGATCCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQTVPGG*LDPGRP
Trigger: AGGGCGCCCAGGATCCAGGCAGCCACCGGGAACAGT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCGTGCAGGAAGCTGGCAGTCTGTaGAAATTTCTTCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: SVCRELRADESLARQAVQEAGSL*KFLLYP
Trigger: AGGATACAGAAGAAATTTGCACAGACTGCCAGCTTC...CTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp TCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTCTGGACAGTGCGCCCCAGGGCTTaGACCCGCATCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: STCGRRMLGPKTVARFWTVRPRA*TRISRR
Trigger: CCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCAC...TGTCCAGAATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGACGAGGGAAGTGCCTaGCGGGAAGAGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYDEGSA*REERRR
Trigger: TCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACTCCCCGGCACCACCTaGGCTGATCTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPLPGTT*ADLKEV
Trigger: CACCTCTTTGAGATCAGCCCAGGTGGTGCCGGGGAG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCTCCCCGGCACCACCTaGGCTGATCTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPLPGTT*ADLKEV
Trigger: CACCTCTTTGAGATCAGCCCAGGTGGTGCCGGGGAG...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGGAGCGCCTCGGGGTTaGCCGGCACCTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLGAPRG*PAPSPA
Trigger: AGCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACCTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNLTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGGTCCCTCACCAGGTTaGCCTGGCCTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAGPSPG*PGLACG
Trigger: TCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGGTCCCTCACCAGGTTaGCCTGGCCTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKGPSPG*PGLACG
Trigger: TCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGGAAGTCCTCGTACCTaGCGAAGGGGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGGSPRT*RRGPRA
Trigger: AGCCCGTGGTCCCCTTCGCCAGGTACGAGGACTTCC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTCGTACTCAGTCCGCTaGCGGCACAGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKASYSVR*RHSSAL
Trigger: CAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCTCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSSLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEWLPGS*APSISV
Trigger: CACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCA...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSWLPGS*APSISV
Trigger: CACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCA...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPWLPGS*APSISV
Trigger: CACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCA...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWWLPGS*APSISV
Trigger: CACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCA...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGTGGGCCAGAAGGGCATaGTGTGGAGCAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKWARRA*CGAAGA
Trigger: AGCCCCCGCTGCTCCACACCATGCCCTTCTGGCCCA...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR CCA 90 bp TGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTAGGTGGGCATCACGGTaGGATTGGGAGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: WLCLRMRTVIRCWTREVPRWASR*DWEALQ
Trigger: CTGGAGTGCCTCCCAATCCCACCGTGATGCCCACCT...AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQTVIRC*TREVPA
Trigger: GGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp GCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTGGGGTCCCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: APAPASSMLWSRSRDLGSHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...GGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTACTTGGCTGTCCCTGGTaGCCTCCTCGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLLGCPW*PPRSPT
Trigger: GGTGGGGCTCCGAGGAGGTCACCAGGGACAGCCAAG...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGGTTGGAGCAGCATCTaGTCCCACCTGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERGWSSI*SHLECV
Trigger: CACACACTCCAGGTGGGATCAGATGCTGCTCCAACC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGGTTGGAGCAGCATCTaGTCCCACCTGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTGWSSI*SHLECV
Trigger: CACACACTCCAGGTGGGATCAGATGCTGCTCCAACC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGGTTGGAGCAGCATCTaGTCCCACCTGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEGWSSI*SHLECV
Trigger: CACACACTCCAGGTGGGATCAGATGCTGCTCCAACC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGACCCCTCTGTGCTGCTaGCAACTGCCATGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPETPLCC*QLPCLN
Trigger: ATTCAGGCATGGCAGTTGTCAGCAGCACAGAGGGGT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCTGGAACCTGGGACCTaGGATGCCAGAACTCTCTCG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAALEPGT*DARTLS
Trigger: CGAGAGAGTTCTGGCATCTCAGGTCCCAGGTTCCAG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGATCTCAAAGAGGTaGTTCCCTGGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERLISKR*FPGSSG
Trigger: CCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR GCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCTGATCTCAAAGAGGTaGTTCCCTGGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSLISKR*FPGSSG
Trigger: CCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR GCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCTGATCTCAAAGAGGTaGTTCCCTGGGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPELISKR*FPGSSG
Trigger: CCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000435790.6
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCCAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGAGGGAGGCCACCGTGTaGACGTCTGTTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEREATV*TSVVLS
Trigger: TGACAGCACAACAGACGTGCACACGGTGGCCTCCCT...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGGGAGGCCACCGTGTaGACGTCTGTTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWREATV*TSVVLS
Trigger: TGACAGCACAACAGACGTGCACACGGTGGCCTCCCT...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQRTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPRTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGCGCCCGCCTCGTCCATaGTGTGGTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLRPPRP*CGPGPG
Trigger: CCCTGGACCTGGACCACAGCATGGACGAGGCGGGCG...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCCCTGGCACCTTTTaGCCCAACAGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPGPGTF*PNSQAS
Trigger: GGAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGGCCCTGGCACCTTTTaGCCCAACAGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPGPGTF*PNSQAS
Trigger: GGAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGTCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQSRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPSRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTCTAGAGGGTGGGCATaGGATCTACGGGCAGTACCT +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSASRGWA*DLRAVP
Trigger: AGGTACTGCCCGTAGATCGCATGCCCACCCTCTAGA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS-3UTR GCA 90 bp TGGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTCTGGAACCAGGCCAGTaGACCCTGCCCGGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: WVLYLWPQNVRSKNGCQILEPGQ*TLPGRH
Trigger: GTGACGCCCGGGCAGGGTGCACTGGCCTGGTTCCAG...AATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGGAAGTCCTCGTACCTaGCGAAGGGGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKGSPRT*RRGPRA
Trigger: AGCCCGTGGTCCCCTTCGCCAGGTACGAGGACTTCC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGCCTCGTCCATGCTGTaGTCCAGGTCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYASSML*SRSRDL
Trigger: CAAGTCCCTGGACCTGGACCACAGCATGGACGAGGC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPSLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGTCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPESLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCTCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSSLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKALSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKLSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACTGGCTGCCTGGATCCTaGGCGCCCTCCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYWLPGS*APSISV
Trigger: CACAGAAATGGAGGGCGCCCAGGATCCAGGCAGCCA...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCAAGGGTTCTAGAGGGTaGGCATGCGATCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAKGSRG*ACDLRA
Trigger: TGCCCGTAGATCGCATGCCCACCCTCTAGAACCCTT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCAGACACACCTGTTaGGGTGCAGAAAACCACCAG +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAARHTC*GAENHQ
Trigger: CTGGTGGTTTTCTGCACCCCAACAGGTGTGTCTGGC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR CCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTACAAACGGGCGCGCCGTaGGAGCTGGAGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLQTGAP*ELERPG
Trigger: ACCTGGCCTCTCCAGCTCCCACGGCGCGCCCGTTTG...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGTGGCAGGTTGGAACTaGAACCTGGGACCTGAGATG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAVAGWN*NLGPEM
Trigger: CATCTCAGGTCCCAGGTTCCAGTTCCAACCTGCCAC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGAGCAGGTGGCAGGTTaGAACTGGAACCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWEQVAG*NWNLGP
Trigger: AGGTCCCAGGTTCCAGTTCCAACCTGCCACCTGCTC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGCAGCTGGGCGCAGCTaGGGAAGTCCTCGTACCTGG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLAAGRS*GSPRTW
Trigger: CCAGGTACGAGGACTTCCTCAGCTGCGCCCAGCTGC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGGTTGGAGCAGCATCTaGTCCCACCTGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSGWSSI*SHLECV
Trigger: CACACACTCCAGGTGGGATCAGATGCTGCTCCAACC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATGCTGTCATCCACTTaGTTTTGCTCGTCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSMLSST*FCSSSR
Trigger: GCGCGAGGACGAGCAAAAGCAAGTGGATGACAGCAT...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKVSSRR*PKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAVSSRR*PKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKMKSTH*STSRGA
Trigger: GGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCAT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR GCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAAGGGAGGCCACCGTGTaGACGTCTGTTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGREATV*TSVVLS
Trigger: TGACAGCACAACAGACGTGCACACGGTGGCCTCCCT...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATGATAGGGACCTCGGCTaGCGGAAGGAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHDRDLG*RKEDFQ
Trigger: TTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATC...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLRAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCTTCGATTCTTTCGCTGGGCTCGCTGTTaGTGGCACCCGCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLTGTFVFSGQHSLLRFFRWARC*WHPRPP
Trigger: AGGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCG...AAAGAATCGAAGAAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCTCCTCCATTTCCCTCTaGAACAGCTGGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSSSISL*NSWFLL
Trigger: GAGGAGGAACCAGCTGTTGCAGAGGGAAATGGAGGA...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTCCTCCATTTCCCTCTaGAACAGCTGGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLASSISL*NSWFLL
Trigger: GAGGAGGAACCAGCTGTTGCAGAGGGAAATGGAGGA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGGCCCTGGCACCTTTTaGCCCAACAGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSGPGTF*PNSQAS
Trigger: GGAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGACCCTCACCAGGAACTaGATGGTTGGAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPETLTRN*MVGAAS
Trigger: AGATGCTGCTCCAACCATGCAGTTCCTGGTGAGGGT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGTTTCCTCTAGGCGCTaGCCAAAGATCCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGVSSRR*PKIPGG
Trigger: GCCTCCAGGGATCTTTGGGCAGCGCCTAGAGGAAAC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCAAACGTCCTCCTTTTaGTGGAAGCTGTCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCQTSSF*WKLSAA
Trigger: TGCTGCCGACAGCTTCCAGCAAAAGGAGGACGTTTG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCCATCACTAGGCTTTTaGAGCGGGCCCTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKPSLGF*SGPSWP
Trigger: AGGCCAGGAGGGCCCGCTCCAAAAGCCTAGTGATGG...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTCTGGACAGGCTGTCCGGCTCGCTaGGCTCGCTGTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: STCGRRMLGPKTVARFWTGCPAR*ARCCWH
Trigger: GTGCCAGCAACAGCGAGCCCAGCGAGCCGGACAGCC...TGTCCAGAATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCTCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSSLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGGAGACCAGCAGACGTaGTACAGAAGTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSGDQQT*YRSELC
Trigger: GCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCC...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWAKRYS*YRPLLT
Trigger: GGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNAKRYS*YRPLLT
Trigger: GGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGCTGACTGTTCCCGGTaGCTGCCTGGATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLADCSR*LPGSWA
Trigger: CGCCCAGGATCCAGGCAGCCACCGGGAACAGTCAGC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTGCGGGGCTGCTCACCTaGAACCAGGGCCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLAGLLT*NQGQPS
Trigger: AGACGGCTGGCCCTGGTTCCAGGTGAGCAGCCCCGC...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GTGCTGGACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGGCATCACGGTGGGATTaGGAGGCACTCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VLDEGSAFHDGYWVLYLWASRWD*EALQSQ
Trigger: CTGTGACTGGAGTGCCTCCCAATCCCACCGTGATGC...CCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGTTGGAACTGGAACCTaGGACCTGAGATGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCVGTGT*DLRCQN
Trigger: GTTCTGGCATCTCAGGTCCCAGGTTCCAGTTCCAAC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATCGCTCTGCCAGTCATaGAGAAGCTGCAGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPSLCQS*RSCSFV
Trigger: CACGAAGCTGCAGCTTCTCCATGACTGGCAGAGCGA...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGGCTTTTGGAGCGGGTaGAATATCTGGCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSGFWSG*NIWLQT
Trigger: CGTTTGCAGCCAGATATTTCACCCGCTCCAAAAGCC...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR GCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGTCATCCACTTGCTTTTaGTCGTCCTCGCGCCTAGTC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQSSTCF*SSSRLV
Trigger: GACTAGGCGCGAGGACGAGCAAAAGCAAGTGGATGA...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR GCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCGCAGGGCCGTTCATaGTGTCATCCACTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPQGRS*CHPLAF
Trigger: AAAAGCAAGTGGATGACAGCATGAACGGCCCTGCGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCACAAACCAGCGCTGCTaGCAGTTCTTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCTNQRC*QFFMML
Trigger: GAGCATCATGAAGAACTGGCAGCAGCGCTGGTTTGT...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp AGCCCGTTCATAAGCCAGTTCCCGCCGGAGGAGATGATGGGCACCTCCAGGGATACAAACCAGCGCTGCTaGCAGTTCTTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: SPFISQFPPEEMMGTSRDTNQRC*QFFMML
Trigger: GAGCATCATGAAGAACTGGCAGCAGCGCTGGTTTGT...ATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGAACTGGCTTATGAACGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGAGGGAGGCCACCGTGTaGACGTCTGTTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKREATV*TSVVLS
Trigger: TGACAGCACAACAGACGTGCACACGGTGGCCTCCCT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQRTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKRTVIR*WTREVP
Trigger: AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTTCCTCCATTTCCCTCTaGAACAGCTGGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAASSISL*NSWFLL
Trigger: GAGGAGGAACCAGCTGTTGCAGAGGGAAATGGAGGA...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCTCCTCCATTTCCCTCTaGAACAGCTGGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTSSISL*NSWFLL
Trigger: GAGGAGGAACCAGCTGTTGCAGAGGGAAATGGAGGA...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCCCTGGCACCTTTTaGCCCAACAGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQGPGTF*PNSQAS
Trigger: GGAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGTCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKSRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTCCAGAGCGCCTGGCTaGTCCAGAGATACAGACGCT +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKASRAPG*SRDTDA
Trigger: AGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAACCCTCACCAGGAACTaGATGGTTGGAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPTLTRN*MVGAAS
Trigger: AGATGCTGCTCCAACCATGCAGTTCCTGGTGAGGGT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACCCTCACCAGGAACTaGATGGTTGGAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATLTRN*MVGAAS
Trigger: AGATGCTGCTCCAACCATGCAGTTCCTGGTGAGGGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACCAGAAAACCACCAGGTaGACGAGGCACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNQKTTR*TRHSST
Trigger: AGTGGAGGAGTGCCTCGTGCACCTGGTGGTTTTCTG...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACACACCTGTTGGGGTaGAGAAAACCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATHLLG*RKPPGA
Trigger: TGCACCTGGTGGTTTTCTGCACCCCAACAGGTGTGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR GCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGAGGAAGCACTGTGCCTaGGCTCACGCCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLRKHCA*AHALQL
Trigger: CAGCTGGAGGGCGTGAGCGCAGGCACAGTGCTTCCT...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGGCCTGCCTGATCTTTaGGCTCAGCATGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERGLPDL*AQHVLA
Trigger: TGCAAGAACATGCTGAGCCCAAAGATCAGGCAGGCC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCTACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSYFRSW*TVSSRR
Trigger: GCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGCTCACCAGGTTGGCCTaGCCTGGCATGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLLTRLA*PGMRNS
Trigger: GCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAG...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQTVIRC*TREVPS
Trigger: GGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCACATTGTCGTAGGTaGAGAGTCTCTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGAHCRR*RVSARS
Trigger: GCTCCGTGCAGAGACTCTCCACCTACGACAATGTGC...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSANSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGCTCTCTCTCTCCAGCTaGCTCCAGAGCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLLSLSS*LQSAWL
Trigger: CAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAG...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNAKRYS*YRPLLT
Trigger: GGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGC...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GTGCTGGACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGACTGGACGCTCGTCTTaGAATGACTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLDEGSAFHDGYWVLYLWTGRSS*NDSARS
Trigger: GCTCCTGGCTGAGTCATTCCAAGACGAGCGTCCAGT...CCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGAAGCTGCAGCTTCGTaGGAGCTGGCCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLEAAAS*ELALSP
Trigger: TGGGGACAGGGCCAGCTCCCACGAAGCTGCAGCTTC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSADVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCATCTTGGAATGGCCTTaGGAAAGTCACGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERILEWP*ESHGVL
Trigger: CAAGACCCCGTGACTTTCTCAAGGCCATTCCAAGAT...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR TCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGACAACTGCCATGCCTaGATGTCCACACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKDNCHA*MSTLWE
Trigger: CTCCCAGAGTGTGGACATTCAGGCATGGCAGTTGTC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR GCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACAAACCAGCGCTGCTaGCAGTTCTTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATNQRC*QFFMML
Trigger: GAGCATCATGAAGAACTGGCAGCAGCGCTGGTTTGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTAGCACAAACCAGCGCTaGTGCCAGTTCTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPSTNQR*CQFFMM
Trigger: CATCATGAAGAACTGGCAGCAGCGCTGGTTTGTGCT...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCAGTCGAAGGAATCCTaGAGGTCCCTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAQSKES*RSLTRL
Trigger: CAACCTGGTGAGGGACCTGCAGGATTCCTTCGACTG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCEQVVI*LRKVAH
Trigger: GTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAEQVVI*LRKVAH
Trigger: GTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp AGCCCGTTCATAAGCCAGTTCCCGCCGGAGGAGATGATGGGCACCTCCAGGGATGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPFISQFPPEEMMGTSRDEQVVI*LRKVAH
Trigger: GTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC...ATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGAACTGGCTTATGAACGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACACCCTCACCAGGAACTaGATGGTTGGAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYTLTRN*MVGAAS
Trigger: AGATGCTGCTCCAACCATGCAGTTCCTGGTGAGGGT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATCAAACGTCCTCCTTTTaGTGGAAGCTGTCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHQTSSF*WKLSAA
Trigger: TGCTGCCGACAGCTTCCAGCAAAAGGAGGACGTTTG...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGCTCCCCGGCACCACCTaGGCTGATCTCAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLLPGTT*ADLKEV
Trigger: CACCTCTTTGAGATCAGCCCAGGTGGTGCCGGGGAG...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000374172.5
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp AGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCTTCGCCATACTGGCCACGCTaGGTATGCCGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SSSSNRDIRFLRSALPSSPYWPR*VCRGPG
Trigger: GCCTGGTCCCCGGCATACCCAGCGTGGCCAGTATGG...CGAAGAAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCCCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPENSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPNSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTNSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGCATCTGATCCCACCTaGAGTGTGTGGGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQASDPT*SVWGPK
Trigger: TTTGGGACCCCACACACTCCAGGTGGGATCAGATGC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKAKRYS*YRPLLT
Trigger: GGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCTTCGATTCTTTGCCCGCGCTCCCGGATaGAGTCCACACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTGTFVFSGQHSLLRFFARAPG*SPHTAP
Trigger: TGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGC...AAAGAATCGAAGAAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TGGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTGGCTGTGTTTGCGGATaGGGACGGTCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WVLYLWPQNVRSKNGCQIGCVCG*GRSSGA
Trigger: AGCACCTGATGACCGTCCTCATCCGCAAACACAGCC...AATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPDVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTTTAATAAAGAAAGCTaGCTGTTCCCGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNFNKES*LFPVAA
Trigger: GGCAGCCACCGGGAACAGTCAGCTTTCTTTATTAAA...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCTTTAATAAAGAAAGCTaGCTGTTCCCGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTFNKES*LFPVAA
Trigger: GGCAGCCACCGGGAACAGTCAGCTTTCTTTATTAAA...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR TCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGTTTAATAAAGAAAGCTaGCTGTTCCCGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQFNKES*LFPVAA
Trigger: GGCAGCCACCGGGAACAGTCAGCTTTCTTTATTAAA...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAGCACAAACCAGCGCTaGTGCCAGTTCTTCATGATG +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYSTNQR*CQFFMM
Trigger: CATCATGAAGAACTGGCAGCAGCGCTGGTTTGTGCT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS-3UTR GCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPEREQVVI*LRKVAH
Trigger: GTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPEQVVI*LRKVAH
Trigger: GTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAGGTCCAAAAACGGTTaGCAGATTCTGGACACTCAT +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARSKNG*QILDTH
Trigger: ATGAGTGTCCAGAATCTGGCAACCGTTTTTGGACCT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGAGGTCCAAAAACGGTTaGCAGATTCTGGACACTCAT +
Preference number: 4 (lower is better)
Translates to: VSGSLSLQLAPERLAAPERSKNG*QILDTH
Trigger: ATGAGTGTCCAGAATCTGGCAACCGTTTTTGGACCT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAATCCTCCATTTCCCTCTaGAACAGCTGGTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQSSISL*NSWFLL
Trigger: GAGGAGGAACCAGCTGTTGCAGAGGGAAATGGAGGA...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGGTGAAATATCTGGCTaGAAACGTCCTCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAGEISG*KRPPFA
Trigger: AGCAAAAGGAGGACGTTTGCAGCCAGATATTTCACC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAPYFRS*WTVSSR
Trigger: CCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLATVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSTVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp AGCCCGTTCATAAGCCAGTTCCCGCCGGAGGAGATGATGGGCACCTCCAGGGATACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SPFISQFPPEEMMGTSRDTVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...ATCCCTGGAGGTGCCCATCATCTCCTCCGGCGGGAACTGGCTTATGAACGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAATTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTTCCATGATGGTTACTaGGTCCTCTACCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAFHDGY*VLYLWP
Trigger: CGGCCACAGGTAGAGGACCCAGTAACCATCATGGAA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGTCCCTCTGCAACAGCTaGTTCCTCCTCTCCGCATCC +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLSLCNS*FLLSAS
Trigger: GGATGCGGAGAGGAGGAACCAGCTGTTGCAGAGGGA...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGACCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCAACTCCATACAAGGCTaGAGACCAGCAGACGTGGTA +
Preference number: 4 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSNSIQG*RPADVV
Trigger: TACCACGTCTGCTGGTCTCCAGCCTTGTATGGAGTT...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATGAAGGATATTTCCTaGGTAAGGGCTAAGCGCTAC +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSMKDIS*VRAKRY
Trigger: GTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCAT...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCCTGGGTTCAAATCCTaGCTCAGCTACAGGAACATT +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNPGFKS*LSYRNI
Trigger: AATGTTCCTGTAGCTGAGCCAGGATTTGAACCCAGG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCACTTGCAGATGTATCTaGGCAGGTTGTAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSATCRCI*AGCNLP
Trigger: AGGCAAATTACAACCTGCTCAGATACATCTGCAAGT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYDVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCACATTTGAGTATGCCTaGACTTCATCCAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCTFEYA*TSSRNL
Trigger: CAGGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS-3UTR GCA 90 bp TCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTCTGGACAAGGGAGGCCACCGTGTaGACGTCTGTTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STCGRRMLGPKTVARFWTREATV*TSVVLS
Trigger: TGACAGCACAACAGACGTGCACACGGTGGCCTCCCT...TGTCCAGAATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACAGGTCCAAAAACGGTTaGCAGATTCTGGACACTCAT +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNRSKNG*QILDTH
Trigger: ATGAGTGTCCAGAATCTGGCAACCGTTTTTGGACCT...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR GCA 90 bp CCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTGAGTATGCCAGGGCCCAGTCGGTGTaGAGGGAACTGCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PKTVARFWTLILLTFEYARAQSV*RELRAD
Trigger: GTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCT...GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCGAAGCTGGCAGTCTGTaGAAATTTCTTCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCEAGSL*KFLLYP
Trigger: AGGATACAGAAGAAATTTGCACAGACTGCCAGCTTC...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAACGGTTGCCAGATTCTaGACACTCATCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPTVARF*TLILLT
Trigger: TGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTCCATTCCTTTTACTTTaGGGCCCTGGCACCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAPFLLL*GPGTFC
Trigger: GCAAAAGGTGCCAGGGCCCCAAAGTAAAAGGAATGG...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGCTAAGCGCTACTCTTaGTACCGTCCCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLAKRYS*YRPLLT
Trigger: GGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAATGAAGGATATTTCCTaGGTAAGGGCTAAGCGCTAC +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPMKDIS*VRAKRY
Trigger: GTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCAT...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTATGAAGGATATTTCCTaGGTAAGGGCTAAGCGCTAC +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAMKDIS*VRAKRY
Trigger: GTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCAT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCATGAAGGATATTTCCTaGGTAAGGGCTAAGCGCTAC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERMKDIS*VRAKRY
Trigger: GTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCAT...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CCA 90 bp CTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCTTCGATTCTTTTCACCAGGGCCGAGGTaGCGACGAAAACCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLTGTFVFSGQHSLLRFFSPGPR*RRKPVP
Trigger: AGGGACGGGTTTTCGTCGCCACCTCGGCCCTGGTGA...AAAGAATCGAAGAAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCACTTGCAGATGTATCTaGGCAGGTTGTAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTTCRCI*AGCNLP
Trigger: AGGCAAATTACAACCTGCTCAGATACATCTGCAAGT...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTACTTGCAGATGTATCTaGGCAGGTTGTAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPTCRCI*AGCNLP
Trigger: AGGCAAATTACAACCTGCTCAGATACATCTGCAAGT...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCTFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCGGACACTCATCTTGTTaGCATTTGAGTATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTGHSSC*HLSMPE
Trigger: TTCAGGCATACTCAAATGTCAACAAGATGAGTGTCC...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR TCA 90 bp TGGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTGGGAAGTGCCTTCCATaGTGGTTACTGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: WVLYLWPQNVRSKNGCQIGKCLP*WLLGPL
Trigger: TAGAGGACCCAGTAACCATCATGGAAGGCACTTCCC...AATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQDVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKDVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKADVVQK*ALPFLL
Trigger: TAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTC...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR TCA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTTTAATAAAGAAAGCTaGCTGTTCCCGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAFNKES*LFPVAA
Trigger: GGCAGCCACCGGGAACAGTCAGCTTTCTTTATTAAA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTGAGTATGCCCCAGGGCTCCGGCTCTaGTCCCCCATCACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PKTVARFWTLILLTFEYAPGLRL*SPITRL
Trigger: AAGCCTAGTGATGGGGGAGCAGAGCCGGAGCCCTGG...GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTAGAGAAATAAATCCCTaGGTTCAAATCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAREINP*VQILAQ
Trigger: CTGAGCCAGGATTTGAACCCAGGGATTTATTTCTCT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS-3UTR TCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQTFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPETFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNTFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCATCTTGTTGACATTTaGGTATGCCTGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEHLVDI*VCLNFI
Trigger: GATGAAGTTCAGGCATACTCAAATGTCAACAAGATG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR TCA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACCAAGAAGCCTCGCTGTaGAGAATTAGTTCATTAAGC +
Preference number: 4 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYQEASL*RISSLS
Trigger: GCTTAATGAACTAATTCTTCACAGCGAGGCTTCTTG...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR TCA 90 bp GGTCCAGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTGGCTTTTGGAGCGGGTaGAATATCTGGCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: GPVLLLTGTFVFSGQHSLGFWSG*NIWLQT
Trigger: CGTTTGCAGCCAGATATTTCACCCGCTCCAAAAGCC...AAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTAAGCACAAACCAGCGCTaGTGCCAGTTCTTCATGATG +
Preference number: 4 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLSTNQR*CQFFMM
Trigger: CATCATGAAGAACTGGCAGCAGCGCTGGTTTGTGCT...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AGTTCTTCTTCTAACCGGGACATTCGTTTTCTCAGGTCAGCACTCCCTTCTTCGTGGGTCCTCTACCTGTaGCCGCAGAATGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSSSNRDIRFLRSALPSSWVLYL*PQNVRS
Trigger: GGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA...CGAAGAAGGGAGTGCTGACCTGAGAAAACGAATGTCCCGGTTAGAAGAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGATGAAGGATATTTCCTaGGTAAGGGCTAAGCGCTAC +
Preference number: 4 (lower is better)
Translates to: APERLAAPEIQTLLTPYKMKDIS*VRAKRY
Trigger: GTAGCGCTTAGCCCTTACCCAGGAAATATCCTTCAT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACTACATAAACCTCGATaGATTATTTATCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPLHKPR*IIYPSQ
Trigger: CTGGGATGGATAAATAATGCATCGAGGTTTATGTAG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CCA 90 bp CCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTGAGTATGCCGGTGCCGTGAAGAGCTaGCTGTGTTTGCGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PKTVARFWTLILLTFEYAGAVKS*LCLRMR
Trigger: CCTCATCCGCAAACACAGCCAGCTCTTCACGGCACC...GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR GCA 90 bp TGGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTGGTGAAATATCTGGCTaGAAACGTCCTCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: WVLYLWPQNVRSKNGCQIGEISG*KRPPFA
Trigger: AGCAAAAGGAGGACGTTTGCAGCCAGATATTTCACC...AATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp TGGGTCCTCTACCTGTGGCCGCAGAATGTTAGGTCCAAAAACGGTTGCCAGATTACTTGCAGATGTATCTaGGCAGGTTGTAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: WVLYLWPQNVRSKNGCQITCRCI*AGCNLP
Trigger: AGGCAAATTACAACCTGCTCAGATACATCTGCAAGT...AATCTGGCAACCGTTTTTGGACCTAACATTCTGCGGCCACAGGTAGAGGACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR TCA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTAACATTTGAGTATGCCTaGACTTCATCCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLTFEYA*TSSRNL
Trigger: CAAGTTTCTGGATGAAGTTCAGGCATACTCAAATGT...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CCA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGAGAGAAATAAATCCCTaGGGCTTGATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLREINP*GLISSL
Trigger: CAAAGATGAGATCAAGCCCCAGGGATTTATTTCTCT...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS CCA 90 bp GCCGAGGTGGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTGGCCTaGCCACGTGCGCCCCAGGGCTTGCACCCGCATCTCCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: AEVATKTRPSGVAVA*PRAPQGLHPHLPPV
Trigger: CACCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp CCAGGGCCGAGGTGGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTaGCCTGGCCACGTGCGCCCCAGGGCTTGCACCCGCATCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PGPRWRRKPVPRAWQ*PGHVRPRACTRISR
Trigger: GCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 90 bp GGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTGGCCTGGCCACGTaGGCCCCAGGGCTTGCACCCGCATCTCCCGCCGGTGGTAAGCGG +
Preference number: 5 (lower is better)
Translates to: GDENPSLGRGSGLAT*APGLAPASPAGGKR
Trigger: CCGCTTACCACCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CGACTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCCGTGCGCCCCAGGGCTaGCACCCGCATCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: RLAGRGPGPRHTGHAGYARAPQG*HPHLPP
Trigger: CGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACG...GGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp GGTTCACCAGGGCCGAGGTGGCGACGAAAACCCGTCCCTCGGGCGTaGCAGTGGCCTGGCCACGTGCGCCCCAGGGCTTGCACCCGCATC +
Preference number: 5 (lower is better)
Translates to: GSPGPRWRRKPVPRA*QWPGHVRPRACTRI
Trigger: GATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGCCCTGGTGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 90 bp CATACACCAGCTAAGCGGGCACAGCTGGGCACAGTTCCCGGGGCCTaGCGGGCAGCGCTGGGAAGGGCGGCAGAGAGCGCGGACTGGACG +
Preference number: 5 (lower is better)
Translates to: HTPAKRAQLGTVPGA*RAALGRAAESADWT
Trigger: CGTCCAGTCCGCGCTCTCTGCCGCCCTTCCCAGCGCTGCCCGGCAGGCCCCGGGAACTGTGCCCAGCTGTGCCCGCTTAGCTGGTGTATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp TCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGCAGGCCGTGCAGAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: SVCRELRADESLARQAVQRSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...CTGCACGGCCTGCCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CCCCCTTCGGGCTTCCCGATAGGGACCTCGGCTGCCGGAAGGAGGACTTCCAACGCCCGGCGGCAGCTCTaGAGCTCCCGGCCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PPSGFPIGTSAAGRRTSNARRQL*SSRPAP
Trigger: AGGAGCGGGCCGGGAGCTCAAGAGCTGCCGCCGGGC...GTTGGAAGTCCTCCTTCCGGCAGCCGAGGTCCCTATCGGGAAGCCCGAAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 90 bp TGCCAGCCACTCGGCCCAGGCTCGCTCTGCCAGTCATGGAGAAGCTaGAGCTTCGTGGGAGCTGGCCCTGTCCCCAGAGCCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: CQPLGPGSLCQSWRS*SFVGAGPVPRARPP
Trigger: GGGCGGCCTGGCTCTGGGGACAGGGCCAGCTCCCACGAAGCTGCAGCTTCTCCATGACTGGCAGAGCGAGCCTGGGCCGAGTGGCTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CAA 90 bp AGTCTCTGCACGGAGCCCGAGTCCTTGAGCCGGTCTCCCGACGAGGCCCGGCGGTCCAGGTCCAGGGACTaGGGGTCCTCGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLCTEPESLSRSPDEARRSRSRD*GSSLLL
Trigger: CAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGA...CCGCCGGGCCTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGTGCAGAGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 90 bp GGGCATGCGATCTACGGGCAGTACCTCCGCCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCACCCAGTCCTCCATGTCACGCTGGG +
Preference number: 5 (lower is better)
Translates to: GHAIYGQYLRPAGPR*LGGWPAPSPPCHAG
Trigger: CCCAGCGTGACATGGAGGACTGGGTGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGGGCGGAGGTACTGCCCGTAGATCGCATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS CCA 90 bp CAGCGCTGGGAAGGGCGGCAGAGAGCGCGGACTGGACGCTCGTCTTaGAATGACTCAGCCAGGAGCAGCCGCCAGCAGCATGGGCCACGC +
Preference number: 5 (lower is better)
Translates to: QRWEGRQRARTGRSS*NDSARSSRQQHGPR
Trigger: GCGTGGCCCATGCTGCTGGCGGCTGCTCCTGGCTGAGTCATTCCAAGACGAGCGTCCAGTCCGCGCTCTCTGCCGCCCTTCCCAGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp TCGGCCCAGGCTCGCTCTGCCAGTCATGGAGAAGCTGCAGCTTCGTaGGAGCTGGCCCTGTCCCCAGAGCCAGGCCGCCCCTCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SAQARSASHGEAAAS*ELALSPEPGRPSRE
Trigger: CTCCCTTGAGGGGCGGCCTGGCTCTGGGGACAGGGCCAGCTCCCACGAAGCTGCAGCTTCTCCATGACTGGCAGAGCGAGCCTGGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CCA 90 bp GGGCCTTGCTGCCAGCCACTCGGCCCAGGCTCGCTCTGCCAGTCATaGAGAAGCTGCAGCTTCGTGGGAGCTGGCCCTGTCCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GPCCQPLGPGSLCQS*RSCSFVGAGPVPRA
Trigger: GGCTCTGGGGACAGGGCCAGCTCCCACGAAGCTGCAGCTTCTCCATGACTGGCAGAGCGAGCCTGGGCCGAGTGGCTGGCAGCAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS GCA 90 bp CGGGGGCCATACTTCCGCTCGTGGTGGACTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTGGGGCGGCGGGCGCGCAACAAGCGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RGPYFRSWWTVSSRR*PKIPGAAGAQQAGK
Trigger: CTTGCCCGCTTGTTGCGCGCCCGCCGCCCCAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489984.1
CDS CCA 90 bp TCCACCAGCAGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGCTGCCCAAAGATCCCTCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: STSRGARRGPYFRSW*TVSSRRCPKIPPPS
Trigger: GCTGGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCTGCTGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
ENST00000460425.1
CDS CCA 90 bp TGCTCCACCAGCAGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGGCGCTGCCCAAAGATCCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: CSTSRGARRGPYFRS*WTVSSRRCPKIPPP
Trigger: GGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCTGCTGGTGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
ENST00000460425.1
CDS CCA 90 bp TGGGATTGGGAGGCACTCCAGTCACAGGGTTCACCAGGGCCGAGGTaGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTGGCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: WDWEALQSQGSPGPR*RRKPVPRAWQWPGH
Trigger: GTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGCCCTGGTGAACCCTGTGACTGGAGTGCCTCCCAATCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp GGCCACCGTGTGCACGTCTGTTGTGCTCAGGCCCTCCCACTCGCCTaGTCTTCACTCCCTCGGGGCCCCGGCCTTCCTGACATGCCTCGT +
Preference number: 5 (lower is better)
Translates to: GHRVHVCCAQALPLA*SSLPRGPGLPDMPR
Trigger: ACGAGGCATGTCAGGAAGGCCGGGGCCCCGAGGGAGTGAAGACCAGGCGAGTGGGAGGGCCTGAGCACAACAGACGTGCACACGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515523.5
CDS-3UTR CAA 90 bp AGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: SRSPDEARRCPRREDSPFKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...GAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLASLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS GCA 90 bp TGGACGAGGGAAGTGCCTGCCGGGAAGAGAGGCGGAGAAGGGCCTTaGTGCCAGCCACTCGGCCCAGGCTCGCTCTGCCAGTCATGGAGA +
Preference number: 5 (lower is better)
Translates to: WTREVPAGKRGGEGP*CQPLGPGSLCQSWR
Trigger: TCTCCATGACTGGCAGAGCGAGCCTGGGCCGAGTGGCTGGCAGCAAGGCCCTTCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CCA 90 bp TGCTCCACCAGCAGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGGCGCTGCCCAAAGATCCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CSTSRGARRGPYFRS*WTVSSRRCPKIPGG
Trigger: GCCTCCAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCTGCTGGTGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTSLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS CCA 90 bp TCCACCAGCAGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGCTGCCCAAAGATCCCTGGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: STSRGARRGPYFRSW*TVSSRRCPKIPGGK
Trigger: CTTGCCTCCAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCTGCTGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS-3UTR CAA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERRSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPRSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCCTCCCCCTCGTCCTaGGTGAGCAGCTGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAPSPSS*VSSWAQ
Trigger: CTGCGCCCAGCTGCTCACCAAGGACGAGGGGGAGGG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYSLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp GTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTTCCATTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: VFADEDGHQVLDEGSAFHSLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...ATGGAAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAGGCGGAGAAGGGCCTaGCTGCCAGCCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARRRRA*LPATRP
Trigger: GGGCCGAGTGGCTGGCAGCAAGGCCCTTCTCCGCCT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS GCA 90 bp CGCTGCCCAAAGATCCCTGGAGGCAAGGGTTCTAGAGGGTGGGCATaGGATCTACGGGCAGTACCTCCGCCCAGCGGGGCCCAGATGACT +
Preference number: 5 (lower is better)
Translates to: RCPKIPGGKGSRGWA*DLRAVPPPSGAQMT
Trigger: AGTCATCTGGGCCCCGCTGGGCGGAGGTACTGCCCGTAGATCGCATGCCCACCCTCTAGAACCCTTGCCTCCAGGGATCTTTGGGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS GCA 90 bp TTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTaGCGGGAAGAGAGGCGGAGAAGGGCCTTGCTGCCAGCCACTCGG +
Preference number: 5 (lower is better)
Translates to: FADEDGHQVLDEGSA*REERRRRALLPATR
Trigger: CCGAGTGGCTGGCAGCAAGGCCCTTCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CCA 90 bp CCGCTCCCCGGCACCACCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTGTGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PLPGTTWADLKEVLP*VLGARRKFSHLCPL
Trigger: CAAGGGACACAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGGTGGTGCCGGGGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
CDS CCA 90 bp TTAGCCAACTCCAGAGTGCCCTCCCCCTCGTCCTTGGTGAGCAGCTaGGCGCAGCTGAGGAAGTCCTCGTACCTGGCGAAGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: LANSRVPSPSSLVSS*AQLRKSSYLAKGTT
Trigger: CGTGGTCCCCTTCGCCAGGTACGAGGACTTCCTCAGCTGCGCCCAGCTGCTCACCAAGGACGAGGGGGAGGGCACTCTGGAGTTGGCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000471013.5
ENST00000515523.5
CDS CCA 90 bp GAGGAAAGGACCACACACCCTCCAACTCCAGGCAGGACAGCAGGATaGGGCCGCAGAACCGCCTTCCTCAGGCACAGAGCCGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: EERTTHPPTPGRTAG*GRRTAFLRHRAASR
Trigger: CCTGCTTGCGGCTCTGTGCCTGAGGAAGGCGGTTCTGCGGCCCCATCCTGCTGTCCTGCCTGGAGTTGGAGGGTGTGTGGTCCTTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CAA 90 bp CTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LAPERLAAPEIQTLLTPYRSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...GTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: VSGSLSLQLAPERLAAPERSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGCCCTCCCCCTCGTCCTaGGTGAGCAGCTGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWPSPSS*VSSWAQ
Trigger: CTGCGCCCAGCTGCTCACCAAGGACGAGGGGGAGGG...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CAA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCCTCCCCCTCGTCCTaGGTGAGCAGCTGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEPSPSS*VSSWAQ
Trigger: CTGCGCCCAGCTGCTCACCAAGGACGAGGGGGAGGG...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLATEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSATEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp TCTTTTCACACTCCTCTCGTACTCAGTCCGCTGGCGGCACAGCTCGGCCCTGAGACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: SFHTPLVLSPLAAQLGPETEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...CTCAGGGCCGAGCTGTGCCGCCAGCGGACTGAGTACGAGAGGAGTGTGAAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAATCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQSLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PERLAAPEIQTLLTPYKASLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTTCCCCGGCACCACCTTaGGGCGCTCGCAGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPSPAPP*GARRCP
Trigger: GGGACACCTGCGAGCGCCCAAAGGTGGTGCCGGGGA...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS GCA 90 bp CCTTCCTCCCTTCTCCTGGGCATGGTCTTCCCTCTTGTGGAGCCCTaGCACGATGCCCACGGCACACCGGACATGCACTTCTCACCTGGG +
Preference number: 5 (lower is better)
Translates to: PSSLLLGMVFPLVEP*HDAHGTPDMHFSPG
Trigger: CCCAGGTGAGAAGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGGGAGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS GCA 90 bp GCCGTGAAGAGCTGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCTGCCGGGAAGAGAGGCGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: AVKSWLCLRMRTVIR*WTREVPAGKRGGEG
Trigger: CCCTTCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCTCTTCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CAA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGGCTCAGCATGTTCTaGCAGCCGTCCGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGLSMF*QPSGQP
Trigger: GGGCTGGCCGGACGGCTGCAAGAACATGCTGAGCCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CAA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCCCCATCACTAGGCTTTaGGAGCGGGCCCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSAPITRL*ERALLA
Trigger: GGCCAGGAGGGCCCGCTCCAAAAGCCTAGTGATGGG...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CAA 90 bp AGCCGGTCTCCCGACGAGGCCCGGCGGTGTCCGCGCAGGGAGGACAGCCCGTTCATAAATCCCTGGGGCTaGATCTCATCTTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SRSPDEARRCPRREDSPFINPWG*ISSLSL
Trigger: CAAGGACAAAGATGAGATCAAGCCCCAGGGATTTAT...GAACGGGCTGTCCTCCCTGCGCGGACACCGCCGGGCCTCGTCGGGAGACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: APERLAAPEIQTLLTPYKRSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWRSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CAA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: TEVSGSLSLQLAPERLAARSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp TCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: SWVRAKRYSWYRPLLTLTRSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...GGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CAA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCAGGTCCCTCACCAGGTaGGCCTGGCCTGGCATGCGG +
Preference number: 5 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSRSLTR*AWPGMR
Trigger: CCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCT...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSTEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: TEVSGSLSLQLAPERLAATEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTTCCAGGTCCAGGGACTaGGGGTCCTCGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLASRSRD*GSSLLL
Trigger: CAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGA...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CTCGCTGGACGAGGCCCCGGACCACGCCATACTGGCCACGCTGGGTATGCCGGGCCCATCACTAGGCTTTaGGAGCGGGTGAAATATCTG +
Preference number: 5 (lower is better)
Translates to: LAGRGPGPRHTGHAGYAGPITRL*ERVKYL
Trigger: CAGATATTTCACCCGCTCCAAAAGCCTAGTGATGGG...CCCGGCATACCCAGCGTGGCCAGTATGGCGTGGTCCGGGGCCTCGTCCAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 90 bp CCTTCTCCTGGGCATGGTCTTCCCTCTTGTGGAGCCCTGCCACGATaGCCACGGCACACCGGACATGCACTTCTCACCTGGGGCTTGATC +
Preference number: 5 (lower is better)
Translates to: PSPGHGLPSCGALPR*PRHTGHALLTWGLI
Trigger: GATCAAGCCCCAGGTGAGAAGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS CCA 90 bp GCTCTGTGCCTTCCTCCCTTCTCCTGGGCATGGTCTTCCCTCTTGTaGAGCCCTGCCACGATGCCCACGGCACACCGGACATGCACTTCT +
Preference number: 5 (lower is better)
Translates to: ALCLPPFSWAWSSLL*SPATMPTAHRTCTS
Trigger: AGAAGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGGGAGGAAGGCACAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS CCA 90 bp GTGATGGAGTCAGTGGCTCTGTGCCTTCCTCCCTTCTCCTGGGCATaGTCTTCCCTCTTGTGGAGCCCTGCCACGATGCCCACGGCACAC +
Preference number: 5 (lower is better)
Translates to: VMESVALCLPPFSWA*SSLLWSPATMPTAH
Trigger: GTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGGGAGGAAGGCACAGAGCCACTGACTCCATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS CCA 90 bp GACAGTCAGCACTTCTCAGCACACTGTGGATCACACGCATTAGCCTaGCACCTGGCAGCGCCCCGAGGTGGGCATCACGGTGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: DSQHFSAHCGSHALA*HLAAPRGGHHGGIG
Trigger: CCCAATCCCACCGTGATGCCCACCTCGGGGCGCTGCCAGGTGCCAGGCTAATGCGTGTGATCCACAGTGTGCTGAGAAGTGCTGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp GTGAAGAGCTGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTGCCGGGAAGAGAGGCGGAGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: VKSWLCLRMRTVIRC*TREVPAGKRGGEGP
Trigger: AGGCCCTTCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCTCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CAA 90 bp GCACCCGCGCCCGCCTCGTCCATGCTGTGGTCCAGGTCCAGGGACTTGGGGTCCAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: APAPASSMLWSRSRDLGSRKVAH*FSQLQS
Trigger: ACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCT...GGACCCCAAGTCCCTGGACCTGGACCACAGCATGGACGAGGCGGGCGCGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCAGGTCCAGGGACTaGGGGTCCTCGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNSRSRD*GSSLLL
Trigger: CAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGA...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCTCCAGGTCCAGGGACTaGGGGTCCTCGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSSRSRD*GSSLLL
Trigger: CAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGA...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp AAGGATATTTCCTGGGTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGTCGCTGGGCTCGCTGTaGCTGGCACCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: KDISWVRAKRYSWYRPLLSLGSL*LAPAPA
Trigger: GGCGGGCGCGGGTGCCAGCAACAGCGAGCCCAGCGA...CAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTACCCAGGAAATATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS CCA 90 bp GTCCCTTGTAGAGAAATAAATCCCCCTCCTGGCCTGCCTGATCTTTaGGCTCAGCATGTTCTTGCAGCCGTCCGGCCAGCCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VPCREINPPPGLPDL*AQHVLAAVRPAPQG
Trigger: GCCCTGCGGGGCTGGCCGGACGGCTGCAAGAACATGCTGAGCCCAAAGATCAGGCAGGCCAGGAGGGGGATTTATTTCTCTACAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471013.5
CDS CCA 90 bp GTGAGGAAGCAGGCACCAAGGCTGCACGGTGAGCAGGTGGCAGGTTaGAACTGGAACCTGGGACCTGAGATGCCAGAACTCTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: VRKQAPRLHGEQVAG*NWNLGPEMPELSRL
Trigger: CAGCCGAGAGAGTTCTGGCATCTCAGGTCCCAGGTTCCAGTTCCAACCTGCCACCTGCTCACCGTGCAGCCTTGGTGCCTGCTTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS-3UTR CAA 90 bp GAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCAGAATGTTAAGGAGCGCCTCGGGGTaGGCCGGCACCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: EVPSMMVTGSSTCGRRMLRSASG*AGTFSR
Trigger: GCGGGAGAAGGTGCCGGCCAACCCCGAGGCGCTCCT...TAACATTCTGCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAACGGAGCCCGAGTCCTaGAGCCGGTCTCCCGACGAG +
Preference number: 5 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQTEPES*SRSPDE
Trigger: CTCGTCGGGAGACCGGCTCAAGGACTCGGGCTCCGT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCTCCAGGTCCAGGGACTaGGGGTCCTCGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSSRSRD*GSSLLL
Trigger: CAGCAGCAGCGAGGACCCCAAGTCCCTGGACCTGGA...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CAA 90 bp TCCAGGGCCCAGTCGGTGTGCAGGGAACTGCGGGCAGACGAGTCGCTGGCGCGGTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: SRAQSVCRELRADESLARFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...CCGCGCCAGCGACTCGTCTGCCCGCAGTTCCCTGCACACCGACTGGGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp TCCCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SPQSPQRYQDLSLSSWLQGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...CTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS TCA 90 bp CCAGTGCACCCTGCCCGGGCGTCACCCCACCACGGACATTCACAATaGCAGTCAGCACTTCTCAGCACACTGTGGATCACACGCATTAGC +
Preference number: 5 (lower is better)
Translates to: PVHPARASPHHGHSQ*QSALLSTLWITRIS
Trigger: GCTAATGCGTGTGATCCACAGTGTGCTGAGAAGTGCTGACTGTCATTGTGAATGTCCGTGGTGGGGTGACGCCCGGGCAGGGTGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 90 bp TGTGCACGTCTGTTGTGCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTGTGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: CARLLCWADLKEVLP*VLGARRKFSHLCPL
Trigger: CAAGGGACACAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGCACAACAGACGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471013.5
CDS-3UTR CAA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGGACGGACGGCTCGCCTaGGACTACATAAACCTCGAT +
Preference number: 5 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEDGRLA*DYINLD
Trigger: ATCGAGGTTTATGTAGTCCAAGGCGAGCCGTCCGTC...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CAA 90 bp GTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGCCGTGTGCACGTCTGTaGTGCTGTCAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VSGSLSLQLAPERLAAPEPCARL*CCQTVA
Trigger: AGCCACTGTTTGACAGCACAACAGACGTGCACACGG...CTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCCCGTGTGCACGTCTGTaGTGCTGTCAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCPCARL*CCQTVA
Trigger: AGCCACTGTTTGACAGCACAACAGACGTGCACACGG...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLAKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCGGGCCCTGGCACCTTTaGCCCCAACAGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSGPWHL*PQQSSF
Trigger: GAAGCTTGACTGTTGGGGCAAAAGGTGCCAGGGCCC...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CAA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAATGTCCCCTCCAGTCCTaGCAGCAGCACAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQCPLQS*QQHSPM
Trigger: CATGGGGCTGTGCTGCTGCAAGGACTGGAGGGGACA...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS-3UTR CAA 90 bp GCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGGGCCAGACACACCTGTaGGGGTGCAGAAAACCACCA +
Preference number: 5 (lower is better)
Translates to: ALLLVPSPSDPHQELHGWGQTHL*GCRKPP
Trigger: TGGTGGTTTTCTGCACCCCAACAGGTGTGTCTGGCC...CCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS-3UTR CAA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGCAAACGTCCTCCTTTaGCTGGAAGCTGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPANVLL*LEAVGS
Trigger: GCTGCCGACAGCTTCCAGCAAAAGGAGGACGTTTGC...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS-3UTR CAA 90 bp TGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTGCAAACGTCCTCCTTTaGCTGGAAGCTGTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: WLCLRMRTVIRCWTREVPANVLL*LEAVGS
Trigger: GCTGCCGACAGCTTCCAGCAAAAGGAGGACGTTTGC...AGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGGTCATCCACTTGCTTTaGCTCGTCCTCGCGCCTAGT +
Preference number: 5 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPEVIHLL*LVLAPS
Trigger: ACTAGGCGCGAGGACGAGCAAAAGCAAGTGGATGAC...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CAA 90 bp CCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCCATGCTGTCATCCACTaGCTTTTGCTCGTCCTCGCG +
Preference number: 5 (lower is better)
Translates to: PQSPQRYQDLSLSSWLQSHAVIH*LLLVLA
Trigger: CGCGAGGACGAGCAAAAGCAAGTGGATGACAGCATG...GCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249601.9
CDS-3UTR CAA 90 bp CAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACCGTGTGCACGTCTGTaGTGCTGTCAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: QLAPERLAAPEIQTLLTPPCARL*CCQTVA
Trigger: AGCCACTGTTTGACAGCACAACAGACGTGCACACGG...TGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp ACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: TVPTEVSGSLSLQLAPERKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...GCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp TCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: SPAGSRAPGCSRDTDASNKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...GTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS GCA 90 bp TCCCTCTTGTGGAGCCCTGCCACGATGCCCACGGCACACCGGACATaGACTTCTCACCTGGGGCTTGATCTCATCTTTGTCCTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: SLLWSPATMPTAHRT*TSHLGLDLIFVLVV
Trigger: TACTACAAGGACAAAGATGAGATCAAGCCCCAGGTGAGAAGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS CCA 90 bp GAACTCCAGTTTTTGCTCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTGTGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: ELQFLLWADLKEVLP*VLGARRKFSHLCPL
Trigger: CAAGGGACACAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGAGCAAAAACTGGAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493012.2
CDS-3UTR CAA 90 bp CTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAGCCCGTGTGCACGTCTGTaGTGCTGTCAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LLLVPSPSDPHQELHGWSPCARL*CCQTVA
Trigger: AGCCACTGTTTGACAGCACAACAGACGTGCACACGG...GCTCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CAA 90 bp GTAAGGGCTAAGCGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: VRAKRYSWYRPLLTLTRNKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...GTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCGCTTAGCCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000477708.6
CDS-3UTR CAA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSARKVAH*FSQLQS
Trigger: ACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLARKVAH*FSQLQS
Trigger: ACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGAAGAGCTGGCTGTGTTaGCGGATGAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: APERLAAPEIQTLLTPYKKSWLC*RMRTVI
Trigger: GATGACCGTCCTCATCCGCAAACACAGCCAGCTCTT...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS-3UTR CAA 90 bp ACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTCCCATCACTAGGCTTTaGGAGCGGGTGAAATATCTG +
Preference number: 5 (lower is better)
Translates to: TEVSGSLSLQLAPERLAAPITRL*ERVKYL
Trigger: CAGATATTTCACCCGCTCCAAAAGCCTAGTGATGGG...AGCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS GCA 90 bp TGGAAATCCTGGCAAAACATCACTGTGATGGAGTCAGTGGCTCTGTaGCTTCCTCCCTTCTCCTGGGCATGGTCTTCCCTCTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: WKSWQNITVMESVAL*LPPFSWAWSSLLWS
Trigger: GCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGGGAGGAAGGCACAGAGCCACTGACTCCATCACAGTGATGTTTTGCCAGGATTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS-3UTR CAA 90 bp CCCACAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PTVPTEVSGSLSLQLAPERKVAH*FSQLQS
Trigger: ACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCT...CTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCAGCTGGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PAGSRAPGCSRDTDASNSTSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...GGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CAGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QSPQRYQDLSLSSWLQSATSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...GGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PTEVSGSLSLQLAPERLATSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...AGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS TCA 90 bp GTGTGGCACCTCCCTGCTCTCTCTTTTGCTCCTGCTCTGGCCATGTaGCATGACTGCTCCCTCTTTGCCTTCCGCCATGATTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: VWHLPALSFAPALAM*HDCSLFAFRHDSKF
Trigger: AAACTTAGAATCATGGCGGAAGGCAAAGAGGGAGCAGTCATGTCACATGGCCAGAGCAGGAGCAAAAGAGAGAGCAGGGAGGTGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS-3UTR CAA 90 bp TGGACGAGGGAAGTGCCTTCCATGATGGTTACTGGGTCCTCTACCTGTGGCCGCACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: WTREVPSMMVTGSSTCGRTSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...GCGGCCACAGGTAGAGGACCCAGTAACCATCATGGAAGGCACTTCCCTCGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS-3UTR CAA 90 bp CACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTGGCTGCTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: HRGIRISLSPAGSRAPGCFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...GCAGCCAGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQRKVAH*FSQLQS
Trigger: ACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp CGCTACTCTTGGTACCGTCCCCTTCTGACCCTCACCAGGAACTGCATGGTTGGAACTTCATCCAGAAACTaGCAGATGTATCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RYSWYRPLLTLTRNCMVGTSSRN*QMYLSR
Trigger: CCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGT...TCCAACCATGCAGTTCCTGGTGAGGGTCAGAAGGGGACGGTACCAAGAGTAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
CDS-3UTR CAA 90 bp AGTCCCCACAGAGGTATCAGGATCTCTCTCTCTCCAGCTGGCTCCAGAGCGCCTTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: SPHRGIRISLSPAGSRAPFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...AGGCGCTCTGGAGCCAGCTGGAGAGAGAGAGATCCTGATACCTCTGTGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GGCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAATAAATCCCTGGGGCTaGATCTCATCTTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GSRAPGCSRDTDASNSIQINPWG*ISSLSL
Trigger: CAAGGACAAAGATGAGATCAAGCCCCAGGGATTTAT...TTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000435790.6
CDS CCA 90 bp GGCCTGGCGGAAGGTATTTGGATCATGGGGGCGGTTTCTCTTGAGTaGTTAGCACCATCTTCTTGGTGCTGTCCTCAAAATAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: GLAEGIWIMGAVSLE*LAPSSWCCPQNRVN
Trigger: ATTCACTCTATTTTGAGGACAGCACCAAGAAGATGGTGCTAACCACTCAAGAGAAACCGCCCCCATGATCCAAATACCTTCCGCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS-3UTR CAA 90 bp CCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGGCTTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: PERLAAPEIQTLLTPYKAFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...AGCCTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS-3UTR CAA 90 bp GCTCCAGAGCGCCTGGCTGCTCCAGAGATACAGACGCTTCTAACTCCATACAAGTTCTGGACACTCATCTaGTTGACATTTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: APERLAAPEIQTLLTPYKFWTLI*LTFEYA
Trigger: GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAA...CTTGTATGGAGTTAGAAGCGTCTGTATCTCTGGAGCAGCCAGGCGCTCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
CDS TCA 90 bp ACGAGCAATCTCTTGAGGGCCTACTTTGCGCCAGGCACTGTAAGGTaGGTTAGTGACAAGTTGGGCCTGTCCTTATTGAACTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TSNLLRAYFAPGTVR*VSDKLGLSLLNSSF
Trigger: AAAACTGGAGTTCAATAAGGACAGGCCCAACTTGTCACTAACTCACCTTACAGTGCCTGGCGCAAAGTAGGCCCTCAAGAGATTGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493012.2
CDS-3UTR CAA 90 bp CCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTGAGTATGCCCCGTGTGCACGTCTGTaGTGCTGTCAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PKTVARFWTLILLTFEYAPCARL*CCQTVA
Trigger: AGCCACTGTTTGACAGCACAACAGACGTGCACACGG...GGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 90 bp AATGGGGTGGGAAATGAAGATTCCCTGCAGGCTGAAATATTCCTGTaGCTTTCAAGTTATGGGATAGGATGGCCTCTCTTTCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: NGVGNEDSLQAEIFL*LSSYGIGWPLFLPL
Trigger: CAGGGGAAGAAAGAGAGGCCATCCTATCCCATAACTTGAAAGTCACAGGAATATTTCAGCCTGCAGGGAATCTTCATTTCCCACCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511570.1
CDS CCA 90 bp GGAGGAAGTTCAGTCACCTGTGTCCCTTGTAGAGAAATAAATCCCTaGGTTCAAATCCTGGCTCAGCTACAGGAACATTGTTCAACCTGT +
Preference number: 5 (lower is better)
Translates to: GGSSVTCVPCREINP*VQILAQLQEHCSTC
Trigger: ACAGGTTGAACAATGTTCCTGTAGCTGAGCCAGGATTTGAACCCAGGGATTTATTTCTCTACAAGGGACACAGGTGACTGAACTTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374172.5
CDS GCA 90 bp AACTTCATCCAGAAACTTGCAGATGTATCTGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCACTTGTTTAGCCAACTCCAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: NFIQKLADVSEQVVI*LRKVAHLFSQLQSA
Trigger: GGCACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTCAGATACATCTGCAAGTTTCTGGATGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000471013.5
ENST00000515523.5
CDS GCA 90 bp ATCATGGGGGCGGTTTCTCTTGAGTGGTTAGCACCATCTTCTTGGTaGTGTCCTCAAAATAGAGTGAATTCTCACGAAATCTGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: IMGAVSLEWLAPSSW*CPQNRVNSHEIWWF
Trigger: AAACCACCAGATTTCGTGAGAATTCACTCTATTTTGAGGACAGCACCAAGAAGATGGTGCTAACCACTCAAGAGAAACCGCCCCCATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS TCA 90 bp TCCAAAAACGGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTaGGTATGCCTGAACTTCATCCAGAAACCTGTCAAACAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SKNGCQILDTHLVDI*VCLNFIQKPVKQWL
Trigger: AAGCCACTGTTTGACAGGTTTCTGGATGAAGTTCAGGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACCGTTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS TCA 90 bp CCTTTATCTGGTATTTTCTTGGATTTTAAGCAAGAAGCCTCGCTGTaGAGAATTAGTTCATTAAGCGTAAGTGCATCTAGGGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: PLSGIFLDFKQEASL*RISSLSVSASRDLG
Trigger: TCCAAGATCCCTAGATGCACTTACGCTTAATGAACTAATTCTTCACAGCGAGGCTTCTTGCTTAAAATCCAAGAAAATACCAGATAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS CAA 72 bp GGCGTGGCAGTGGCCTGGCCACGTGCGCCCCAGGGCTaGCACCCGCATCTCCCGCCGGTGGTAAGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: GVAVAWPRAPQG*HPHLPPVVSGA
Trigger: GGCCCCGCTTACCACCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 72 bp AACCCGTCCCTCGGGCGTGGCAGTGGCCTGGCCACGTaGGCCCCAGGGCTTGCACCCGCATCTCCCGCCGGT +
Preference number: 6 (lower is better)
Translates to: NPSLGRGSGLAT*APGLAPASPAG
Trigger: ACCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 72 bp GGGCCGAGGTGGCGACGAAAACCCGTCCCTCGGGCGTaGCAGTGGCCTGGCCACGTGCGCCCCAGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: GPRWRRKPVPRA*QWPGHVRPRAC
Trigger: GCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CAA 90 bp CGTCCCTCGGGCGTGGCAGTGGCCTGGCCACGTGCGCCCCAGGGCTaGCACCCGCATCTCCCGCCGGTGGTAAGCGGGGCCTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: RPSGVAVAWPRAPQG*HPHLPPVVSGASSR
Trigger: TCTGCTGGAGGCCCCGCTTACCACCGGCGGGAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 72 bp AGGTGGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTaGCCTGGCCACGTGCGCCCCAGGGCTTGCACCCGC +
Preference number: 6 (lower is better)
Translates to: RWRRKPVPRAWQ*PGHVRPRACTR
Trigger: GCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 72 bp CCCTCATGTCCTGCTCGTTCGGGGCCCCGTGGCCGCTaGCGTCACCCGTCAGGCTCCCTCGGCTACCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSCPARSGPRGR*RHPSGSLGYLS
Trigger: GGAGAGGTAGCCGAGGGAGCCTGACGGGTGACGCCAGCGGCCACGGGGCCCCGAACGAGCAGGACATGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000471013.5
ENST00000491108.1
CDS CCA 72 bp GCGACGAAAACCCGTCCCTCGGGCGTGGCAGTGGCCTaGCCACGTGCGCCCCAGGGCTTGCACCCGCATCTC +
Preference number: 6 (lower is better)
Translates to: ATKTRPSGVAVA*PRAPQGLHPHL
Trigger: GAGATGCGGGTGCAAGCCCTGGGGCGCACGTGGCCAGGCCACTGCCACGCCCGAGGGACGGGTTTTCGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 72 bp TCAGTGAGCCCGCGCTCCCGGATGAAGTCCACACACTaGTCCACCAGCAGGGGCGCCAGGCGGGGGCCATAC +
Preference number: 6 (lower is better)
Translates to: SVSPRSRMKSTH*STSRGARRGPY
Trigger: GTATGGCCCCCGCCTGGCGCCCCTGCTGGTGGAGCAGTGTGTGGACTTCATCCGGGAGCGCGGGCTCACTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000489984.1
CDS CCA 72 bp CCTGGCAGCGCCCCGAGGTGGGCATCACGGTGGGATTaGGAGGCACTCCAGTCACAGGGTTCACCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: PGSAPRWASRWD*EALQSQGSPGP
Trigger: CGGCCCTGGTGAACCCTGTGACTGGAGTGCCTCCCAATCCCACCGTGATGCCCACCTCGGGGCGCTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 72 bp GCTGCCCAAAGATCCCTCCGCCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCACCCAGTCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: AAQRSLRPAGPR*LGGWPAPSPPC
Trigger: ACATGGAGGACTGGGTGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGGGCGGAGGGATCTTTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
ENST00000460425.1
CDS CCA 72 bp GGAATCCTGCAGGTCCCTCACCAGGTTGGCCTGGCCTaGCATGCGGAACAGCCCCTCCTCAGTGAGCCCGCG +
Preference number: 6 (lower is better)
Translates to: GILQVPHQVGLA*HAEQPLLSEPA
Trigger: CGCGGGCTCACTGAGGAGGGGCTGTTCCGCATGCCAGGCCAGGCCAACCTGGTGAGGGACCTGCAGGATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000489984.1
CDS CCA 72 bp GAGGCACTCCAGTCACAGGGTTCACCAGGGCCGAGGTaGCGACGAAAACCCGTCCCTCGGGCGTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: EALQSQGSPGPR*RRKPVPRAWQW
Trigger: CCACTGCCACGCCCGAGGGACGGGTTTTCGTCGCCACCTCGGCCCTGGTGAACCCTGTGACTGGAGTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CCA 72 bp CAAAGGCAGGTCATACACCAGCTAAGCGGGCACAGCTaGGCACAGTTCCCGGGGCCTGCCGGGCAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: QRQVIHQLSGHS*AQFPGPAGQRW
Trigger: CCAGCGCTGCCCGGCAGGCCCCGGGAACTGTGCCCAGCTGTGCCCGCTTAGCTGGTGTATGACCTGCCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 72 bp ATCTACGGGCAGTACCTCCGCCCAGCGGGGCCCAGATaGCTCGGCGGATGGCCTGCACCCAGTCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: IYGQYLRPAGPR*LGGWPAPSPPC
Trigger: ACATGGAGGACTGGGTGCAGGCCATCCGCCGAGTCATCTGGGCCCCGCTGGGCGGAGGTACTGCCCGTAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS GCA 72 bp CTTGCAGCCGTCCGGCCAGCCCCGCAGGGCCGTTCATaGTGTCATCCACTTGCTTTTGCTCGTCCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: LAAVRPAPQGRS*CHPLAFARPRA
Trigger: GGCGCGAGGACGAGCAAAAGCAAGTGGATGACAGCATGAACGGCCCTGCGGGGCTGGCCGGACGGCTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000471013.5
ENST00000491108.1
CDS GCA 72 bp AAGATCCCTGGAGGCAAGGGTTCTAGAGGGTGGGCATaGGATCTACGGGCAGTACCTCCGCCCAGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: KIPGGKGSRGWA*DLRAVPPPSGA
Trigger: GGCCCCGCTGGGCGGAGGTACTGCCCGTAGATCGCATGCCCACCCTCTAGAACCCTTGCCTCCAGGGATCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS GCA 72 bp GAGGACGGTCATCAGGTGCTGGACGAGGGAAGTGCCTaGCGGGAAGAGAGGCGGAGAAGGGCCTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: EDGHQVLDEGSA*REERRRRALLP
Trigger: TGGCAGCAAGGCCCTTCTCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS GCA 72 bp GCTTCAGCAGGGAGGCCACCGTGTGCACGTCTGTTGTaGTCAGGCCCTCCCACTCGCCTGGTCTTCACTCCC +
Preference number: 6 (lower is better)
Translates to: ASAGRPPCARLL*SGPPTRLVFTP
Trigger: GGGAGTGAAGACCAGGCGAGTGGGAGGGCCTGAGCACAACAGACGTGCACACGGTGGCCTCCCTGCTGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515523.5
CDS CCA 72 bp GCTTTTGGAGCGGGCCCTCCTGGCCTGCCTGATCTTTaGGCTCAGCATGTTCTTGCAGCCGTCCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: AFGAGPPGLPDL*AQHVLAAVRPA
Trigger: GGCTGGCCGGACGGCTGCAAGAACATGCTGAGCCCAAAGATCAGGCAGGCCAGGAGGGCCCGCTCCAAAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000491108.1
CDS CCA 72 bp AGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTGGTaGACTGTTTCCTCTAGGCGCTGCCCAAAGATCCCT +
Preference number: 6 (lower is better)
Translates to: RGARRGPYFRSW*TVSSRRCPKIP
Trigger: AGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000489984.1
CDS CCA 72 bp AGCAGGGGCGCCAGGCGGGGGCCATACTTCCGCTCGTaGTGGACTGTTTCCTCTAGGCGCTGCCCAAAGATC +
Preference number: 6 (lower is better)
Translates to: SRGARRGPYFRS*WTVSSRRCPKI
Trigger: GATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTATGGCCCCCGCCTGGCGCCCCTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000489984.1
CDS CCA 72 bp GAAGGGCGGCAGAGAGCGCGGACTGGACGCTCGTCTTaGAATGACTCAGCCAGGAGCAGCCGCCAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: EGRQRARTGRSS*NDSARSSRQQH
Trigger: ATGCTGCTGGCGGCTGCTCCTGGCTGAGTCATTCCAAGACGAGCGTCCAGTCCGCGCTCTCTGCCGCCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS CAA 90 bp TCCGGCCAGCCCCGCAGGGCCGTTCATGCTGTCATCCACTTGCTTTaGCTCGTCCTCGCGCCTAGTCGCCCCTCATGTCCTGCTCGTTCG +
Preference number: 6 (lower is better)
Translates to: SGQPRRAVHAVIHLL*LVLAPSRPSCPARS
Trigger: CGAACGAGCAGGACATGAGGGGCGACTAGGCGCGAGGACGAGCAAAAGCAAGTGGATGACAGCATGAACGGCCCTGCGGGGCTGGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000471013.5
ENST00000491108.1
CDS GCA 72 bp TACTTCCGCTCGTGGTGGACTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTCCGCCCAGCGGGGCCCAGATG +
Preference number: 6 (lower is better)
Translates to: YFRSWWTVSSRR*PKIPPPSGAQM
Trigger: CATCTGGGCCCCGCTGGGCGGAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000417247.6
ENST00000435790.6
ENST00000460425.1
CDS GCA 72 bp GGGCATGGTCTTCCCTCTTGTGGAGCCCTGCCACGATaGCCACGGCACACCGGACATGCACTTCTCACCTGG +
Preference number: 6 (lower is better)
Translates to: GHGLPSCGALPR*PRHTGHALLTW
Trigger: CCAGGTGAGAAGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS GCA 72 bp TACTTCCGCTCGTGGTGGACTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTGGGGCGGCGGGCGCGCAACAA +
Preference number: 6 (lower is better)
Translates to: YFRSWWTVSSRR*PKIPGAAGAQQ
Trigger: TTGTTGCGCGCCCGCCGCCCCAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489984.1
CDS CAA 90 bp GTGGCTCTGTGCCTTCCTCCCTTCTCCTGGGCATGGTCTTCCCTCTaGTGGAGCCCTGCCACGATGCCCACGGCACACCGGACATGCACT +
Preference number: 6 (lower is better)
Translates to: VALCLPPFSWAWSSL*WSPATMPTAHRTCT
Trigger: AGTGCATGTCCGGTGTGCCGTGGGCATCGTGGCAGGGCTCCACAAGAGGGAAGACCATGCCCAGGAGAAGGGAGGAAGGCACAGAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464445.1
CDS GCA 72 bp CCCGCAGGGCCGTTCATGCTGTCATCCACTTGCTTTTaGTCGTCCTCGCGCCTAGTCGCCCCTCATGTCCTG +
Preference number: 6 (lower is better)
Translates to: PAGPFMLSSTCF*SSSRLVAPHVL
Trigger: CAGGACATGAGGGGCGACTAGGCGCGAGGACGAGCAAAAGCAAGTGGATGACAGCATGAACGGCCCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000471013.5
ENST00000491108.1
CDS GCA 72 bp AGGTGGCAGGTTGGAACTGGAACCTGGGACCTGAGATaGCAGAACTCTCTCGGCTGCCCCACGTCACCCCTC +
Preference number: 6 (lower is better)
Translates to: RWQVGTGTWDLR*QNSLGCPTSPL
Trigger: GAGGGGTGACGTGGGGCAGCCGAGAGAGTTCTGGCATCTCAGGTCCCAGGTTCCAGTTCCAACCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS GCA 72 bp AGCTGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTaGTGGACGAGGGAAGTGCCTGCCGGGAAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SWLCLRMRTVIR*WTREVPAGKRG
Trigger: GCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CCA 72 bp GGCACCACCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: GTTWADLKEVLP*VLGARRKFSHL
Trigger: CAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGGTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
CDS CCA 72 bp TGCCCAAAGATCCCTGGAGGCAAGGGTTCTAGAGGGTaGGCATGCGATCTACGGGCAGTACCTCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: CPKIPGGKGSRG*ACDLRAVPPPS
Trigger: GCTGGGCGGAGGTACTGCCCGTAGATCGCATGCCCACCCTCTAGAACCCTTGCCTCCAGGGATCTTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS CCA 72 bp TGGCTGTGTTTGCGGATGAGGACGGTCATCAGGTGCTaGACGAGGGAAGTGCCTGCCGGGAAGAGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: WLCLRMRTVIRC*TREVPAGKRGG
Trigger: TCCGCCTCTCTTCCCGGCAGGCACTTCCCTCGTCCAGCACCTGATGACCGTCCTCATCCGCAAACACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CAA 72 bp CCCCGCAGGGCCGTTCATGCTGTCATCCACTTGCTTTaGCTCGTCCTCGCGCCTAGTCGCCCCTCATGTCCT +
Preference number: 6 (lower is better)
Translates to: PRRAVHAVIHLL*LVLAPSRPSCP
Trigger: AGGACATGAGGGGCGACTAGGCGCGAGGACGAGCAAAAGCAAGTGGATGACAGCATGAACGGCCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249601.9
ENST00000417912.6
ENST00000471013.5
ENST00000491108.1
CDS TCA 72 bp CTCTCTCGGCTGCCCCACGTCACCCCTCTGTGCTGCTaGCAACTGCCATGCCTGAATGTCCACACTCTGGGA +
Preference number: 6 (lower is better)
Translates to: LSRLPHVTPLCC*QLPCLNVHTLG
Trigger: TCCCAGAGTGTGGACATTCAGGCATGGCAGTTGTCAGCAGCACAGAGGGGTGACGTGGGGCAGCCGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477708.6
CDS CAA 72 bp GGCTGCAGTGAGAGGAGCAGTGGCCAGACACACCTGTaGGGGTGCAGAAAACCACCAGGTGCACGAGGCACT +
Preference number: 6 (lower is better)
Translates to: GCSERSSGQTHL*GCRKPPGARGT
Trigger: AGTGCCTCGTGCACCTGGTGGTTTTCTGCACCCCAACAGGTGTGTCTGGCCACTGCTCCTCTCACTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417247.6
CDS CCA 72 bp CTGTTGTGCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: LLCWADLKEVLP*VLGARRKFSHL
Trigger: CAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGCACAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471013.5
CDS TCA 72 bp CCTGCCCGGGCGTCACCCCACCACGGACATTCACAATaGCAGTCAGCACTTCTCAGCACACTGTGGATCACA +
Preference number: 6 (lower is better)
Translates to: PARASPHHGHSQ*QSALLSTLWIT
Trigger: TGTGATCCACAGTGTGCTGAGAAGTGCTGACTGTCATTGTGAATGTCCGTGGTGGGGTGACGCCCGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS GCA 72 bp TACTTCCGCTCGTGGTGGACTGTTTCCTCTAGGCGCTaGCCAAAGATCCCTGGAGGCAAGGGTTCTAGAGGG +
Preference number: 6 (lower is better)
Translates to: YFRSWWTVSSRR*PKIPGGKGSRG
Trigger: CCCTCTAGAACCCTTGCCTCCAGGGATCTTTGGGCAGCGCCTAGAGGAAACAGTCCACCACGAGCGGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374172.5
ENST00000417912.6
CDS CCA 72 bp TTTTTGCTCTGGGCTGATCTCAAAGAGGTGCTTCCCTaGGTCCTCGGGGCCAGGAGGAAGTTCAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: FLLWADLKEVLP*VLGARRKFSHL
Trigger: CAGGTGACTGAACTTCCTCCTGGCCCCGAGGACCCAGGGAAGCACCTCTTTGAGATCAGCCCAGAGCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493012.2
CDS TCA 72 bp CTCCCTGCTCTCTCTTTTGCTCCTGCTCTGGCCATGTaGCATGACTGCTCCCTCTTTGCCTTCCGCCATGAT +
Preference number: 6 (lower is better)
Translates to: LPALSFAPALAM*HDCSLFAFRHD
Trigger: ATCATGGCGGAAGGCAAAGAGGGAGCAGTCATGTCACATGGCCAGAGCAGGAGCAAAAGAGAGAGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 90 bp AGGCTCCCTCGGCTACCTCTCCTGGCTCCGGACGGACGGCTCGCCTaGGACTACATAAACCTCGATGCATTATTTATCCATCCCAGAATT +
Preference number: 6 (lower is better)
Translates to: RLPRLPLLAPDGRLA*DYINLDALFIHPRI
Trigger: AATTCTGGGATGGATAAATAATGCATCGAGGTTTATGTAGTCCAAGGCGAGCCGTCCGTCCGGAGCCAGGAGAGGTAGCCGAGGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000471013.5
CDS CAA 90 bp GATGTATCTGAGCAGGTTGTAATTTGCCTGAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGTGCCCTGGCGAAGGGGACCACGGGC +
Preference number: 6 (lower is better)
Translates to: DVSEQVVICLRKVAH*FSQLQSALAKGTTG
Trigger: GCCCGTGGTCCCCTTCGCCAGGGCACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTCAGATACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 72 bp ATACAAGGCTGGAGACCAGCAGACGTGGTACAGAAGTaGGCTCTGCCATTCCTTTTACTTTGGGGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: IQGWRPADVVQK*ALPFLLLWGPG
Trigger: GCCAGGGCCCCAAAGTAAAAGGAATGGCAGAGCTCACTTCTGTACCACGTCTGCTGGTCTCCAGCCTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249601.9
ENST00000374170.5
ENST00000374172.5
ENST00000417247.6
ENST00000435790.6
ENST00000477708.6
CDS CAA 72 bp CGGCTACCTCTCCTGGCTCCGGACGGACGGCTCGCCTaGGACTACATAAACCTCGATGCATTATTTATCCAT +
Preference number: 6 (lower is better)
Translates to: RLPLLAPDGRLA*DYINLDALFIH
Trigger: ATGGATAAATAATGCATCGAGGTTTATGTAGTCCAAGGCGAGCCGTCCGTCCGGAGCCAGGAGAGGTAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249601.9
ENST00000471013.5
CDS CAA 72 bp GAGCAGGTTGTAATTTGCCTGAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGTGCCCTCCCCCTCGTC +
Preference number: 6 (lower is better)
Translates to: EQVVICLRKVAH*FSQLQSALPLV
Trigger: GACGAGGGGGAGGGCACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000471013.5
ENST00000515523.5
CDS CAA 72 bp GAGCAGGTTGTAATTTGCCTGAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGTGCCCTGGCGAAGGGG +
Preference number: 6 (lower is better)
Translates to: EQVVICLRKVAH*FSQLQSALAKG
Trigger: CCCCTTCGCCAGGGCACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460425.1
CDS TCA 72 bp GGCGGAAGGTATTTGGATCATGGGGGCGGTTTCTCTTaGGTGGTTAGCACCATCTTCTTGGTGCTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: GGRYLDHGGGFS*VVSTIFLVLSS
Trigger: TGAGGACAGCACCAAGAAGATGGTGCTAACCACTCAAGAGAAACCGCCCCCATGATCCAAATACCTTCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 72 bp CTCCTGCTCTGGCCATGTGACATGACTGCTCCCTCTTaGCCTTCCGCCATGATTCTAAGTTTCCTGAGGCAT +
Preference number: 6 (lower is better)
Translates to: LLLWPCDMTAPS*PSAMILSFLRH
Trigger: ATGCCTCAGGAAACTTAGAATCATGGCGGAAGGCAAAGAGGGAGCAGTCATGTCACATGGCCAGAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 90 bp GATGTATCTGAGCAGGTTGTAATTTGCCTGAGGAAGGTTGCTCACTaGTTTAGCCAACTCCAGAGTGCCCTCCCCCTCGTCCTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: DVSEQVVICLRKVAH*FSQLQSALPLVLGE
Trigger: CTCACCAAGGACGAGGGGGAGGGCACTCTGGAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTCAGATACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000471013.5
ENST00000515523.5
CDS CAA 90 bp ATCTGGTGGTTTAAAAGTGTGTGTGGCACCTCCCTGCTCTCTCTTTaGCTCCTGCTCTGGCCATGTGACATGACTGCTCCCTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: IWWFKSVCGTSLLSL*LLLWPCDMTAPSLP
Trigger: AGGCAAAGAGGGAGCAGTCATGTCACATGGCCAGAGCAGGAGCAAAAGAGAGAGCAGGGAGGTGCCACACACACTTTTAAACCACCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 90 bp TCTCTTTTGCTCCTGCTCTGGCCATGTGACATGACTGCTCCCTCTTaGCCTTCCGCCATGATTCTAAGTTTCCTGAGGCATCTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SLLLLLWPCDMTAPS*PSAMILSFLRHLQK
Trigger: CTTCTGGAGATGCCTCAGGAAACTTAGAATCATGGCGGAAGGCAAAGAGGGAGCAGTCATGTCACATGGCCAGAGCAGGAGCAAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS GCA 72 bp GAGGCATCTCCAGAAGCTGAGCAGAGGTCAGCATCATaGTTCCTGGGGCTTGATCTCATCTTTGTCCTTGTA +
Preference number: 6 (lower is better)
Translates to: EASPEAEQRSAS*FLGLDLIFVLV
Trigger: TACAAGGACAAAGATGAGATCAAGCCCCAGGAAGCATGATGCTGACCTCTGCTCAGCTTCTGGAGATGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS GCA 72 bp GACAAGTTGGGCCTGTCCTTATTGAACTCCAGTTTTTaGTCTGGGCTGATCTCAAAGAGGTGCTTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: DKLGLSLLNSSF*SGLISKRCFPG
Trigger: CCCAGGGAAGCACCTCTTTGAGATCAGCCCAGAGCAAAAACTGGAGTTCAATAAGGACAGGCCCAACTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493012.2
CDS CCA 72 bp CCTGATGTCAGTCCTTCAGTTTCCTCATTTGAGAAATaGAGACAACCCAGGCATCTACTCCAGGTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: PDVSPSVSSFEK*RQPRHLLQVKD
Trigger: GTCCTTGACCTGGAGTAGATGCCTGGGTTGTCTCCATTTCTCAAATGAGGAAACTGAAGGACTGACATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 72 bp TTAAGCGTAAGTGCATCTAGGGATCTTGGAATGGCCTaGAGAAAGTCACGGGGTCTTGGGGTATCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: LSVSASRDLGMA*RKSRGLGVSVP
Trigger: AGGAACTGATACCCCAAGACCCCGTGACTTTCTCAAGGCCATTCCAAGATCCCTAGATGCACTTACGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS CAA 72 bp AGTCTTGGCCTGATGTCAGTCCTTCAGTTTCCTCATTaGAGAAATGGAGACAACCCAGGCATCTACTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLGLMSVLQFPH*RNGDNPGIYSR
Trigger: CCTGGAGTAGATGCCTGGGTTGTCTCCATTTCTCAAATGAGGAAACTGAAGGACTGACATCAGGCCAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 90 bp GTACCTGTTAGTCTTGGCCTGATGTCAGTCCTTCAGTTTCCTCATTaGAGAAATGGAGACAACCCAGGCATCTACTCCAGGTCAAGGACT +
Preference number: 6 (lower is better)
Translates to: VPVSLGLMSVLQFPH*RNGDNPGIYSRSRT
Trigger: AGTCCTTGACCTGGAGTAGATGCCTGGGTTGTCTCCATTTCTCAAATGAGGAAACTGAAGGACTGACATCAGGCCAAGACTAACAGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CCA 72 bp GAAGGTATTTGGATCATGGGGGCGGTTTCTCTTGAGTaGTTAGCACCATCTTCTTGGTGCTGTCCTCAAAAT +
Preference number: 6 (lower is better)
Translates to: EGIWIMGAVSLE*LAPSSWCCPQN
Trigger: ATTTTGAGGACAGCACCAAGAAGATGGTGCTAACCACTCAAGAGAAACCGCCCCCATGATCCAAATACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CCA 72 bp TGCTGTCCTCAAAATAGAGTGAATTCTCACGAAATCTaGTGGTTTAAAAGTGTGTGTGGCACCTCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: CCPQNRVNSHEI*WFKSVCGTSLL
Trigger: GAGCAGGGAGGTGCCACACACACTTTTAAACCACCAGATTTCGTGAGAATTCACTCTATTTTGAGGACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CAA 90 bp ATTAGTTCATTAAGCGTAAGTGCATCTAGGGATCTTGGAATGGCCTaGAGAAAGTCACGGGGTCTTGGGGTATCAGTTCCTCAAATCTGT +
Preference number: 6 (lower is better)
Translates to: ISSLSVSASRDLGMA*RKSRGLGVSVPQIC
Trigger: ACAGATTTGAGGAACTGATACCCCAAGACCCCGTGACTTTCTCAAGGCCATTCCAAGATCCCTAGATGCACTTACGCTTAATGAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435790.6
CDS GCA 72 bp CAGAAACTTGCAGATGTATCTGAGCAGGTTGTAATTTaGCTGAGGAAGGTTGCTCACTTGTTTAGCCAACTC +
Preference number: 6 (lower is better)
Translates to: QKLADVSEQVVI*LRKVAHLFSQL
Trigger: GAGTTGGCTAAACAAGTGAGCAACCTTCCTCAGGCAAATTACAACCTGCTCAGATACATCTGCAAGTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249601.9
ENST00000374172.5
ENST00000417247.6
ENST00000417912.6
ENST00000435790.6
ENST00000460425.1
ENST00000471013.5
ENST00000515523.5
CDS GCA 72 bp GCGGTTTCTCTTGAGTGGTTAGCACCATCTTCTTGGTaGTGTCCTCAAAATAGAGTGAATTCTCACGAAATC +
Preference number: 6 (lower is better)
Translates to: AVSLEWLAPSSW*CPQNRVNSHEI
Trigger: GATTTCGTGAGAATTCACTCTATTTTGAGGACAGCACCAAGAAGATGGTGCTAACCACTCAAGAGAAACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS CCA 72 bp TGTCCTCAAAATAGAGTGAATTCTCACGAAATCTGGTaGTTTAAAAGTGTGTGTGGCACCTCCCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: CPQNRVNSHEIW*FKSVCGTSLLS
Trigger: AGAGAGCAGGGAGGTGCCACACACACTTTTAAACCACCAGATTTCGTGAGAATTCACTCTATTTTGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491108.1
CDS TCA 72 bp GGTTGCCAGATTCTGGACACTCATCTTGTTGACATTTaGGTATGCCTGAACTTCATCCAGAAACCTGTCAAA +
Preference number: 6 (lower is better)
Translates to: GCQILDTHLVDI*VCLNFIQKPVK
Trigger: TTTGACAGGTTTCTGGATGAAGTTCAGGCATACTCAAATGTCAACAAGATGAGTGTCCAGAATCTGGCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374170.5
CDS TCA 72 bp GGAAATGAAGATTCCCTGCAGGCTGAAATATTCCTGTaGCTTTCAAGTTATGGGATAGGATGGCCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: GNEDSLQAEIFL*LSSYGIGWPLF
Trigger: AAAGAGAGGCCATCCTATCCCATAACTTGAAAGTCACAGGAATATTTCAGCCTGCAGGGAATCTTCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511570.1
CDS CAA 90 bp TACTCAATCACATCAAACTTTAAATCAATCTTCTATGGCTCCTTATaGCTGAGCTTCCCTCACTTATTCTCCTGGGGCTTGATCTCATCT +
Preference number: 6 (lower is better)
Translates to: YSITSNFKSIFYGSL*LSFPHLFSWGLISS
Trigger: AGATGAGATCAAGCCCCAGGAGAATAAGTGAGGGAAGCTCAGCAATAAGGAGCCATAGAAGATTGATTTAAAGTTTGATGTGATTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511570.1