Pregenerated sensors for ARHGAP21 (Homo sapiens)
Ensembl gene IDs: ENSG00000107863Ensembl transcript IDs: ENST00000396432.7, ENST00000416305.1, ENST00000476499.1, ENST00000477190.1, ENST00000482792.1, ENST00000486374.5, ENST00000612832.4, ENST00000636789.1, ENST00000680286.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCTAATTCCTGGGGATATGCACTTGCACTCTAAACTCTTCCTTTaGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: ILIPGDMHLHSKLFL*SKDELEGNTRTNSL Trigger: TAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAAGAGTTTAGAGTGCAAGTGCATATCCCCAGGAATTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| 3UTR CCA 72 bp | CCTGGGGATATGCACTTGCACTCTAAACTCTTCCTTTaGTCCAAGGATGAACTAGAAGGCAACACTAGGACA | + |
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Preference number: 3 (lower is better) Translates to: PGDMHLHSKLFL*SKDELEGNTRT Trigger: TGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAAGAGTTTAGAGTGCAAGTGCATATCCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS-3UTR TCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACGCTTGCCCTTATCGGTaGCAAGGGGTCGGAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNACPYR*QGVGNE Trigger: TTCATTTCCGACCCCTTGTCACCGATAAGGGCAAGC...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACAAGGTTCCAGTGATCTaGAGCCTGCAGGCTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNKVPVI*SLQADE Trigger: TTCATCAGCCTGCAGGCTCCAGATCACTGGAACCTT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACAGAATCGGGGATTTCTaGAGACAAGGCAGCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNRIGDF*RQGSYS Trigger: ACTGTAGCTGCCTTGTCTGCAGAAATCCCCGATTCT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACAAGGCAGCTACAGTGTaGACAACAGTCCTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNKAATV*TTVLLL Trigger: AAGAAGGAGGACTGTTGTCCACACTGTAGCTGCCTT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | CTCTTCCTTTGGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTACTGGGGATATGCACTTaGACTCTAAACTCTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LFLWSKDELEGNTRTNSLLGICT*TLNSSF Trigger: AAAGGAAGAGTTTAGAGTGCAAGTGCATATCCCCAG...TAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACAACCAGTCATGGTGCTaGATGAGCGTTTCTACAATC | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNNQSWC*MSVSTI Trigger: GATTGTAGAAACGCTCATCCAGCACCATGACTGGTT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACGTGAAAAACCAGTCATaGTGCTGGATGAGCGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNVKNQS*CWMSVS Trigger: AGAAACGCTCATCCAGCACCATGACTGGTTTTTCAC...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACAAAAACCAGTCATGGTaGTGGATGAGCGTTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNKNQSW*WMSVST Trigger: TGTAGAAACGCTCATCCAGCACCATGACTGGTTTTT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACCTAGTAGCTGAATCATaGTATTTCTCCTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNLVAES*YFSSGS Trigger: AGACCCTGAGGAGAAATAGCATGATTCAGCTACTAG...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CCA 90 bp | TTCCTTTGGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTAGGATCTAAACTCTTCCTTTaGTCCAAGGATGAACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: FLWSKDELEGNTRTNSLGSKLFL*SKDELE Trigger: TTCTAGTTCATCCTTGGACCAAAGGAAGAGTTTAGA...TCCTAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACGCAACTGTTCTGCTTTaGTCATCAGATTGTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNATVLL*SSDCCI Trigger: AATACAACAATCTGATGAGCAAAGCAGAACAGTTGC...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACTTTTGGCAACTGTTCTaGTTTGCTCATCAGATTGTT | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNFWQLF*FAHQIV Trigger: AACAATCTGATGAGCAAAGCAGAACAGTTGCCAAAA...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACTTGAGAATATGCCAGTaGTGTGACATCCTTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNLRICQ*CDILCK Trigger: TTTACAAAGGATGTCACAGCACTGGCATATTCTCAA...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACCAGATCAACTATGTTTaGATTTACAAGAATCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VAESCYFSSGSASEITRNQINYV*IYKNRG Trigger: TCCCCGATTCTTGTAAATGCAAACATAGTTGATCTG...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS TCA 90 bp | GATGCAAGCTGCACCACAGAAAGCCACCGCCATGAAAGGATGCTGTaGATTGTAGGCAGAACCAGCTCAATGATAGAAATGGCAAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: DASCTTESHRHERML*IVGRTSSMIEMAKE Trigger: CTCCTTTGCCATTTCTATCATTGAGCTGGTTCTGCCTACAATTCACAGCATCCTTTCATGGCGGTGGCTTTCTGTGGTGCAGCTTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS GCA 90 bp | CACCGTACTTGTATATTCATTAGATCAGAAACTGAGCTAGAGACCTaGTTCCGGGGCGCAAAGCGGACAATAGCAAAGCAGGAAGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: HRTCIFIRSETELET*FRGAKRTIAKQEVD Trigger: GTCAACTTCCTGCTTTGCTATTGTCCGCTTTGCGCCCCGGAAGCAGGTCTCTAGCTCAGTTTCTGATCTAATGAATATACAAGTACGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482792.1 |
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| CDS-3UTR CAA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACCTTCCACCAACTCGCTaGCCCTTATCGGTGACAAGG | + |
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Preference number: 5 (lower is better) Translates to: VAESCYFSSGSASEITRNLPPTR*PLSVTR Trigger: CCTTGTCACCGATAAGGGCAAGCGAGTTGGTGGAAG...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CAA 90 bp | TTCCTTTGGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTAGGACCTGGGGATATGCACTaGCACTCTAAACTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FLWSKDELEGNTRTNSLGPGDMH*HSKLFL Trigger: AAGGAAGAGTTTAGAGTGCAAGTGCATATCCCCAGG...TCCTAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS TCA 90 bp | ATGTACCACATCCTGTATCTGAGACTGATACACAATGTAGAACTTTaGAGAGTGTTGGCCGCCCTAGCTACAATTGAGACACTCATACTG | + |
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Preference number: 5 (lower is better) Translates to: MYHILYLRLIHNVEL*RVLAALATIETLIL Trigger: CAGTATGAGTGTCTCAATTGTAGCTAGGGCGGCCAACACTCTTCAAAGTTCTACATTGTGTATCAGTCTCAGATACAGGATGTGGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS-3UTR CAA 90 bp | TGGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTAGGAATCTCATTCCAAGCGGTTTCTTaGTTTTCCTCCTCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: WSKDELEGNTRTNSLGISFQAVS*FSSSVS Trigger: GGAAACAGAGGAGGAAAACAAAGAAACCGCTTGGAA...TGAGATTCCTAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS-3UTR CAA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACTGGCTGTCTGCGATCTaGATTCCCTTCAGACTAGAT | + |
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Preference number: 5 (lower is better) Translates to: VAESCYFSSGSASEITRNWLSAI*IPFRLD Trigger: ATCTAGTCTGAAGGGAATCAAGATCGCAGACAGCCA...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS-3UTR CAA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACGGCAACTGTTCTGCTTaGCTCATCAGATTGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: VAESCYFSSGSASEITRNGNCSA*LIRLLY Trigger: ATACAACAATCTGATGAGCAAAGCAGAACAGTTGCC...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS TCA 90 bp | ACACAATGTAGAACTTTGAAGAGTGTTGGCCGCCCTAGCTACAATTaGGACACTCATACTGGCATGTTTATGTTGATTTTTGTCAGACTT | + |
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Preference number: 5 (lower is better) Translates to: TQCRTLKSVGRPSYN*DTHTGMFMLIFVRL Trigger: AAGTCTGACAAAAATCAACATAAACATGCCAGTATGAGTGTCTCAATTGTAGCTAGGGCGGCCAACACTCTTCAAAGTTCTACATTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS TCA 90 bp | AACCTGCAAGAGATATTTGAGACAGTAAGAAGAGAACAAAGAGACTaGAAGAAAGAGAGGGACCCCCAGAGAGATAACATTCTAAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: NLQEIFETVRREQRD*KKERDPQRDNILKR Trigger: CCTTTTTAGAATGTTATCTCTCTGGGGGTCCCTCTCTTTCTTTCAGTCTCTTTGTTCTCTTCTTACTGTCTCAAATATCTCTTGCAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000486374.5 |
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| CDS-3UTR CAA 90 bp | CTCTTCCTTTGGTCCAAGGATGAACTAGAAGGCAACACTAGGACAAACTCTTTAGAATTCCAGATTCACTaGGAGAATGTCTTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: LFLWSKDELEGNTRTNSLEFQIH*ENVFIF Trigger: AAAGATGAAGACATTCTCCAAGTGAATCTGGAATTC...TAAAGAGTTTGTCCTAGTGTTGCCTTCTAGTTCATCCTTGGACCAAAGGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416305.1 |
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| CDS-3UTR CAA 90 bp | GTAGCTGAATCATGCTATTTCTCCTCAGGGTCTGCTTCAGAAATAACAAGAAACACAGATCAACTATGTTaGCATTTACAAGAATCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VAESCYFSSGSASEITRNTDQLC*HLQESG Trigger: CCCCGATTCTTGTAAATGCAAACATAGTTGATCTGT...GTTTCTTGTTATTTCTGAAGCAGACCCTGAGGAGAAATAGCATGATTCAGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS GCA 90 bp | TACAATAATCTTATGAGAAACTTTACACCACAGATCAACTATGTTTaGATTTACAAGAATCGGGGATTTCTGCAGACAAGGCAGCTACAG | + |
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Preference number: 5 (lower is better) Translates to: YNNLMRNFTPQINYV*IYKNRGFLQTRQLQ Trigger: CTGTAGCTGCCTTGTCTGCAGAAATCCCCGATTCTTGTAAATGCAAACATAGTTGATCTGTGGTGTAAAGTTTCTCATAAGATTATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS TCA 90 bp | AAATACTTAGGGAAACTAAGGTCTGCTATGAAAAGGAAAACAGATTaGCAGTCTCTGTTGTCTGAAAGGCTATATACTCAGATCCCATTA | + |
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Preference number: 5 (lower is better) Translates to: KYLGKLRSAMKRKTD*QSLLSERLYTQIPL Trigger: TAATGGGATCTGAGTATATAGCCTTTCAGACAACAGAGACTGTCAATCTGTTTTCCTTTTCATAGCAGACCTTAGTTTCCCTAAGTATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486374.5 |
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| CDS CCA 72 bp | TCAGCTCCTAGAGAGATCCAGAGGAAGCGGGACGAGTaGATCCGCACGGGGCTGGCCGGCTCCGGGACAGCG | + |
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Preference number: 6 (lower is better) Translates to: SAPREIQRKRDE*IRTGLAGSGTA Trigger: CGCTGTCCCGGAGCCGGCCAGCCCCGTGCGGATCCACTCGTCCCGCTTCCTCTGGATCTCTCTAGGAGCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396432.7 ENST00000612832.4 |
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| CDS TCA 72 bp | CCGGGGCGCAAAGCGGACAATAGCAAAGCAGGAAGTTaGCATTGTTGGCGCGCCAGGATCTTGTGTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PGRKADNSKAGS*HCWRARILCPK Trigger: TTTGGGACACAAGATCCTGGCGCGCCAACAATGTCAACTTCCTGCTTTGCTATTGTCCGCTTTGCGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482792.1 |
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| CDS GCA 72 bp | ACACAGTGGATAGTCAGAGCTCACAAAGATGCAAGCTaGACCACAGAAAGCCACCGCCATGAAAGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: TQWIVRAHKDAS*TTESHRHERML Trigger: CAGCATCCTTTCATGGCGGTGGCTTTCTGTGGTGCAGCTTGCATCTTTGTGAGCTCTGACTATCCACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS CCA 72 bp | GAATCGGGGATTTCTGCAGACAAGGCAGCTACAGTGTaGACAACAGTCCTCCTTCTTCCTACAGTTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ESGISADKAATV*TTVLLLPTVPA Trigger: AGCTGGAACTGTAGGAAGAAGGAGGACTGTTGTCCACACTGTAGCTGCCTTGTCTGCAGAAATCCCCGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS TCA 72 bp | TGCACCACAGAAAGCCACCGCCATGAAAGGATGCTGTaGATTGTAGGCAGAACCAGCTCAATGATAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: CTTESHRHERML*IVGRTSSMIEM Trigger: CATTTCTATCATTGAGCTGGTTCTGCCTACAATTCACAGCATCCTTTCATGGCGGTGGCTTTCTGTGGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS GCA 72 bp | TGTATATTCATTAGATCAGAAACTGAGCTAGAGACCTaGTTCCGGGGCGCAAAGCGGACAATAGCAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CIFIRSETELET*FRGAKRTIAKQ Trigger: CTGCTTTGCTATTGTCCGCTTTGCGCCCCGGAAGCAGGTCTCTAGCTCAGTTTCTGATCTAATGAATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482792.1 |
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| CDS CCA 72 bp | CAATTGTGGTTGATCATGCAGTCTAAAATCCTGAACTaGGCCATGACTGCCTATAGCACAGTCTGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLWLIMQSKILN*AMTAYSTVCIS Trigger: AGAGATGCAGACTGTGCTATAGGCAGTCATGGCCCAGTTCAGGATTTTAGACTGCATGATCAACCACAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680286.1 |
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| CDS CAA 90 bp | CCACTCCATGCACAATACAGATTGCACAACAAACTCCAATTGTGGTaGATCATGCAGTCTAAAATCCTGAACTGGGCCATGACTGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: PLHAQYRLHNKLQLW*IMQSKILNWAMTAY Trigger: ATAGGCAGTCATGGCCCAGTTCAGGATTTTAGACTGCATGATCAACCACAATTGGAGTTTGTTGTGCAATCTGTATTGTGCATGGAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680286.1 |
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| CDS TCA 72 bp | ATCCTGTATCTGAGACTGATACACAATGTAGAACTTTaGAGAGTGTTGGCCGCCCTAGCTACAATTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ILYLRLIHNVEL*RVLAALATIET Trigger: TGTCTCAATTGTAGCTAGGGCGGCCAACACTCTTCAAAGTTCTACATTGTGTATCAGTCTCAGATACAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477190.1 |
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| CDS TCA 72 bp | TCAGATCCCATTATAATCAAAACTGAATTAATGACTTaGGGAAATCCGGTGGGCTGGTGTCTCCTACCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SDPIIIKTELMT*GNPVGWCLLPD Trigger: ATCGGGTAGGAGACACCAGCCCACCGGATTTCCTCAAGTCATTAATTCAGTTTTGATTATAATGGGATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486374.5 |
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| CDS CCA 72 bp | CATGCACAATACAGATTGCACAACAAACTCCAATTGTaGTTGATCATGCAGTCTAAAATCCTGAACTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HAQYRLHNKLQL*LIMQSKILNWA Trigger: GGCCCAGTTCAGGATTTTAGACTGCATGATCAACCACAATTGGAGTTTGTTGTGCAATCTGTATTGTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680286.1 |
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| CDS CAA 72 bp | GCACAATACAGATTGCACAACAAACTCCAATTGTGGTaGATCATGCAGTCTAAAATCCTGAACTGGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: AQYRLHNKLQLW*IMQSKILNWAM Trigger: CATGGCCCAGTTCAGGATTTTAGACTGCATGATCAACCACAATTGGAGTTTGTTGTGCAATCTGTATTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680286.1 |
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| CDS CAA 72 bp | CTCCATGCACAATACAGATTGCACAACAAACTCCAATaGTGGTTGATCATGCAGTCTAAAATCCTGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LHAQYRLHNKLQ*WLIMQSKILNW Trigger: CCAGTTCAGGATTTTAGACTGCATGATCAACCACAATTGGAGTTTGTTGTGCAATCTGTATTGTGCATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000680286.1 |
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| CDS CAA 72 bp | TCTTATGAGAAACTTTACACCACAGATCAACTATGTTaGCATTTACAAGAATCGGGGATTTCTGCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: SYEKLYTTDQLC*HLQESGISADK Trigger: CTTGTCTGCAGAAATCCCCGATTCTTGTAAATGCAAACATAGTTGATCTGTGGTGTAAAGTTTCTCATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636789.1 |
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| CDS CAA 72 bp | GTAGACTCCGTTCATTGTGAACATTTTAGGAACGAATaGATACTACTAACAATACTGCTTGGTGAATTTACA | + |
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Preference number: 6 (lower is better) Translates to: VDSVHCEHFRNE*ILLTILLGEFT Trigger: TGTAAATTCACCAAGCAGTATTGTTAGTAGTATCAATTCGTTCCTAAAATGTTCACAATGAACGGAGTCTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476499.1 |
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