RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP19 (Homo sapiens)

Ensembl gene IDs: ENSG00000213390

Ensembl transcript IDs: ENST00000358308.7, ENST00000358531.9, ENST00000371027.5, ENST00000466484.1, ENST00000492211.5, ENST00000493068.2

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACTGCTTCCCCATAGTGGCCTGACTCGGCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCCACAGAGCCAGGCACAAACCTGAGC +
Preference number: 1 (lower is better)
Translates to: QLLPHSGLTRLQPTG*EGLYSSTEPGTNLS
Trigger: GCTCAGGTTTGTGCCTGGCTCTGTGGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGGAAGCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp CAACAGGTTCTATCTGTCCCCAGACATGGCCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCAT +
Preference number: 1 (lower is better)
Translates to: QQVLSVPRHGQGRAP*LFSTGCGLTHSSLH
Trigger: ATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGCCATGTCTGGGGACAGATAGAACCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp AAAGGCTGGCAGAGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATAT +
Preference number: 1 (lower is better)
Translates to: KGWQRGLPAGHKAKL*SPRVIFHFSNGAAY
Trigger: ATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp CACCCTCAGAGGGTGCAATGTAATCCCACCCATAAAGAGTCATCCTaGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: HPQRVQCNPTHKESS*DIKAASPLLGTLQS
Trigger: GCTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTGCACCCTCTGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp TTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACTAGCCCATTTCCCAAGGGTGTTCCC +
Preference number: 1 (lower is better)
Translates to: LQVNRTDTSGAPRCH*SQQPSTSPFPKGVP
Trigger: GGGAACACCCTTGGGAAATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp CTCAGGGATAGGACAAAGGCAACCCTTGCTCTGCAGAAAGAACCCTaGGGTGAGGGAATATTTCCCCCAACAGGTTCTATCTGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: LRDRTKATLALQKEP*GEGIFPPTGSICPQ
Trigger: CTGGGGACAGATAGAACCTGTTGGGGGAAATATTCCCTCACCCCAGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTCCTATCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp AAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTA +
Preference number: 1 (lower is better)
Translates to: KSPGCMASHCGARSQ*PQVLLDGSIFNCML
Trigger: TAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp AGTCAGTGGGGTTCACACAGTACAGTCTGGACCAGGAAGGTGGCCTaGAGTTTAATATGTGTATCCCTCTGGCACAAACACAAGGCCCCA +
Preference number: 1 (lower is better)
Translates to: SQWGSHSTVWTRKVA*SLICVSLWHKHKAP
Trigger: TGGGGCCTTGTGTTTGTGCCAGAGGGATACACATATTAAACTGCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGAACCCCACTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp ATGGTAACCCAAGCACTCAGGCTATTATGTCCCACACCTCCTCGCTaGCCTGCTTCTGTCAACTCTACGCTGGTAGAAGATCTCGGCATT +
Preference number: 1 (lower is better)
Translates to: MVTQALRLLCPTPPR*PASVNSTLVEDLGI
Trigger: AATGCCGAGATCTTCTACCAGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGTGTGGGACATAATAGCCTGAGTGCTTGGGTTACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp TTAATAAGCCCACTGAAGGAGCGCGAACGAGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCAATGATTGC +
Preference number: 1 (lower is better)
Translates to: LISPLKERERALFCT*EVEGSRPGVWVNDC
Trigger: GCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCGCGCTCCTTCAGTGGGCTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR CCA 90 bp TTTGAAGCCTTCAGGGTAAAGGAGGGCAGAGATAAGGCTCTCTCCTaGGGAAAGGAGTTCTACACAAAAATGACCTCAGAATGGGGGCCA +
Preference number: 1 (lower is better)
Translates to: FEAFRVKEGRDKALS*GKEFYTKMTSEWGP
Trigger: TGGCCCCCATTCTGAGGTCATTTTTGTGTAGAACTCCTTTCCCCAGGAGAGAGCCTTATCTCTGCCCTCCTTTACCCTGAAGGCTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp GTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACACAAGTaGACACACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCA +
Preference number: 1 (lower is better)
Translates to: VHTRSKPCHCSIQHK*THQIQKPEALAPSP
Trigger: TGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp CTTCTTCTTTCTGATCCTAACTTCCTCTCAGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAATGTAATCCCACCCATAAAGAGTCAT +
Preference number: 1 (lower is better)
Translates to: LLLSDPNFLSGDGLA*TLRGCNVIPPIKSH
Trigger: ATGACTCTTTATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAGAGGAAGTTAGGATCAGAAAGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp CCTGTGTCCCTTCTGACAAAGAGAGGGCGGAACAGTAACACTCCTTaGACATTGGTGACAAGCCACAGCTGCTTCCAAATAAGAACATTC +
Preference number: 1 (lower is better)
Translates to: PVSLLTKRGRNSNTP*TLVTSHSCFQIRTF
Trigger: GAATGTTCTTATTTGGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp CGTTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACAGCAGGGTTTTTCACACCAGATTCA +
Preference number: 1 (lower is better)
Translates to: RYLLLFWPSGTVSIS*CSFTTTAGFFTPDS
Trigger: TGAATCTGGTGTGAAAAACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp CTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGCTTCCTTACAGGTCAACAGAACAGA +
Preference number: 1 (lower is better)
Translates to: LNRNVPTQEERMALF*HSRIDCFLTGQQNR
Trigger: TCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp AAGCAAGCTGCAAGTCCAAGCTTTGCTGTGGGCAGGAATAACACCTaGCCACTAAACAGAAAATTCTGCATGGACCATAGGAGACAACTC +
Preference number: 1 (lower is better)
Translates to: KQAASPSFAVGRNNT*PLNRKFCMDHRRQL
Trigger: GAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR GCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGTCCAAGCTTTGCTGTGGGCAGGAAT +
Preference number: 1 (lower is better)
Translates to: GISRVTVLVGFDNSK*SKQAASPSFAVGRN
Trigger: ATTCCTGCCCACAGCAAAGCTTGGACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR CCA 90 bp CTATCCAACACAAGTGAACACACCAAATCCAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACCACCTGTGTCCCTTCTGACAAAGAG +
Preference number: 1 (lower is better)
Translates to: LSNTSEHTKSKSQKL*PHLQITTCVPSDKE
Trigger: CTCTTTGTCAGAAGGGACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp CAGTATTTTCAACTGCATGCTAACACAGGCTGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTGTTCT +
Preference number: 1 (lower is better)
Translates to: QYFQLHANTGCCEGN*TETFLLRRREWLCS
Trigger: AGAACAGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCAGCCTGTGTTAGCATGCAGTTGAAAATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 90 bp AAGGGTGTTCCCTTGTCCTTCCTGAATGACTCTGGAAGGACATTCTaGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTGGT +
Preference number: 1 (lower is better)
Translates to: KGVPLSFLNDSGRTF*VKSFPLRRINCSFG
Trigger: ACCAAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGAGTCATTCAGGAAGGACAAGGGAACACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp TTTGCTGTGGGCAGGAATAACACCTGCCCACTAAACAGAAAATTCTaGATGGACCATAGGAGACAACTCTGGATCCTTCAGAGAAATCCT +
Preference number: 1 (lower is better)
Translates to: FAVGRNNTCPLNRKF*MDHRRQLWILQRNP
Trigger: AGGATTTCTCTGAAGGATCCAGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCCCACAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR GCA 90 bp CTGCTTCCAAATAAGAACATTCTCTCCTTTAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTTCTTCTTTCTGATCCTAACTTCCTC +
Preference number: 1 (lower is better)
Translates to: LLPNKNILSFKSCQP*RGCCLLLLSDPNFL
Trigger: GAGGAAGTTAGGATCAGAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTTAAAGGAGAGAATGTTCTTATTTGGAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 90 bp GGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTAGAAATAGGTCAGCAAACCACATTT +
Preference number: 1 (lower is better)
Translates to: GQALLPQSHLSFQQW*SIFNSLEIGQQTTF
Trigger: AAATGTGGTTTGCTGACCTATTTCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp AATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATaGTTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAG +
Preference number: 1 (lower is better)
Translates to: NISLMILTPEHNLCL*FHSPKEHLHPSKSQ
Trigger: CTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 90 bp CCTCTTTCTTCCCTTCAGACCACTTCAATCTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAAATAATAAGTTCCTATTTTCTTTGC +
Preference number: 1 (lower is better)
Translates to: PLSSLQTTSILLVSS*QLESQKIISSYFLC
Trigger: GCAAAGAAAATAGGAACTTATTATTTTCTGGCTCTCCAGCTGTCACGATGACACCAACAAGATTGAAGTGGTCTGAAGGGAAGAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR TCA 90 bp ACCAGATTCATTGGTCCCAATGCAAAAGTCTATCATTGTAAAAGGTaGGAAATTCCAACGCCTATGGTTCTCACTAATTTAGTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: TRFIGPNAKVYHCKR*EIPTPMVLTNLVSG
Trigger: CCCACTGACTAAATTAGTGAGAACCATAGGCGTTGGAATTTCTCACCTTTTACAATGATAGACTTTTGCATTGGGACCAATGAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACT +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPAPRCH*SQQPST
Trigger: AGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCACCTGTGTCCCTTCTaGCAAAGAGAGGGCGGAACA +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFHLCPF*QREGGT
Trigger: TGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGGTG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATTTCCCCATAGTGGCCTaGCTCGGCTCCAACCCACAG +
Preference number: 2 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHFPIVA*LGSNPQ
Trigger: CTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGGAA...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATCCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 2 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGGAGGGGGCTGCCAGCTaGGCACAAGGCCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVEGAAS*AQGQAL
Trigger: CAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTC...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCACACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCATGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTC +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPCCEGN*TETFLL
Trigger: GAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCA...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGGTCCAAGCTTTGCTGTaGGCAGGAATAACACCTGCC +
Preference number: 2 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEVQALL*AGITPA
Trigger: GGCAGGTGTTATTCCTGCCCACAGCAAAGCTTGGAC...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTGCAAACCACATTTTGTaGGGCAACTGCTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFANHIL*GNCFPI
Trigger: TATGGGGAAGCAGTTGCCCCACAAAATGTGGTTTGC...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGT +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTQGRAP*LFSTGC
Trigger: ACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTG...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCTGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTC +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSCCEGN*TETFLL
Trigger: GAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCA...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCAAAATGACCTCAGAATaGGGGCCATTAGCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSKMTSE*GPLASS
Trigger: GCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CAA 90 bp CTTCCGCTTAATAAGCCCACTGAAGGAGCGCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCAA +
Preference number: 2 (lower is better)
Translates to: LPLNKPTEGARTSPL*YLGSRRFSPWCLGQ
Trigger: TTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCGCGCTCCTTCAGTGGGCTTATTAAGCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCA +
Preference number: 2 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHANIIQ*VGLEVS
Trigger: TGATACCTCTAACCCCACTCACTGGATGATGTTTGC...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGLQPTG*EGLYSS
Trigger: GGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAG...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 2 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGAGGGGGCTGCCAGCTaGGCACAAGGCCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSEGAAS*AQGQAL
Trigger: CAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGTCACACAGTACAGTCTaGACCAGGAAGGTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVSHSTV*TRKVAC
Trigger: GCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGA...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTAGTGCCTCTTCCGTATaGTGCTGGGTCTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGSASSV*CWVSSW
Trigger: CCAGGAGGAGACCCAGCACCATACGGAAGAGGCACT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGCTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVLLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCC +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLQPTG*EGLYSS
Trigger: GGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGC +
Preference number: 2 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHRMALF*HSRIDC
Trigger: GCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCT...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAGDGLA*TLRGCN
Trigger: ATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGGTAGAAGGTTATGCTaGTTACTCCTCAAATTTGGA +
Preference number: 2 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPGRRLC*LLLKFG
Trigger: TCCAAATTTGAGGAGTAAGCAGCATAACCTTCTACC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCGGTGTAAAACGCTTGTaGATCTTAGGAACCCAAATC +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSGVKRL*ILGTQI
Trigger: GATTTGGGTTCCTAAGATGCACAAGCGTTTTACACC...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCTCCTGAAGGTCATTTaGAGTGACCTCCAGGTCAAC +
Preference number: 2 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHLLKVI*SDLQVN
Trigger: GTTGACCTGGAGGTCACTGCAAATGACCTTCAGGAG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTAATCACCTGGTTGCATaGCCAGTCACTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGNHLVA*PVTVGH
Trigger: GTGCCCCACAGTGACTGGCCATGCAACCAGGTGATT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGT +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAQGRAP*LFSTGC
Trigger: ACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTG...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 2 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGCAGCCCTGCAGAGGTTaGTGCTTGCTTCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVQPCRG*CLLLLS
Trigger: AGAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTG...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTACCTCCTCGCTGGCCTaGTTCTGTCAACTCTACGCT +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAATSSLA*FCQLYA
Trigger: AGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGT...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTTCAGAAGTATTACGTTaGCACCAGAGATGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFSEVLR*HQRCFS
Trigger: ACTAAAACATCTCTGGTGCCAACGTAATACTTCTGA...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTCACACAGTACAGTCTaGACCAGGAAGGTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAASHSTV*TRKVAC
Trigger: GCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCAATGGCCACAGATTCTaGAGTAGGGTTCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSNGHRF*SRVLLF
Trigger: AAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTCTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAALLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHNSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATTCTATCCAACACAAGTaGACACACCAAATCCAAAAG +
Preference number: 2 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHSIQHK*THQIQK
Trigger: CTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGA...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTTCCCCATAGTGGCCTaGCTCGGCTCCAACCCACAG +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPFPIVA*LGSNPQ
Trigger: CTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGGAA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGLLVSS*QLESQK
Trigger: TTTCTGGCTCTCCAGCTGTCACGATGACACCAACAA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATGTGACAAGCCACAGCTaGTTCCAAATAAGAACATTC +
Preference number: 2 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHVTSHS*FQIRTF
Trigger: GAATGTTCTTATTTGGAAGCAGCTGTGGCTTGTCAC...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTCACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTT +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAHKAKL*SPRVIF
Trigger: AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTG...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGKQLSQ*LFRMVL
Trigger: CAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGACAGCAGCCTTCTGTaGCAAATGATAAAAGGGGTT +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTDSSLL*QMIKGV
Trigger: AACCCCTTTTATCATTTGCCACAGAAGGCTGCTGTC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTACCTGCTCCTGTTTTaGCCCTCAGGTACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGYLLLF*PSGTVS
Trigger: ACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATCAAGGTAGAAGGTTATaGTGCTTACTCCTCAAATTT +
Preference number: 2 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHQGRRL*CLLLKF
Trigger: AAATTTGAGGAGTAAGCAGCATAACCTTCTACCTTG...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTACCTGCTCCTGTTTTaGCCCTCAGGTACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSYLLLF*PSGTVS
Trigger: ACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAATCACCTGGTTGCATaGCCAGTCACTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSNHLVA*PVTVGH
Trigger: GTGCCCCACAGTGACTGGCCATGCAACCAGGTGATT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 2 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGAC +
Preference number: 2 (lower is better)
Translates to: WVLVELITTGVKRLCILGGARSQ*PQVLLD
Trigger: GTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGGTCAAGGTCATCCTTTaGTGCCTGAGTTCTGGATCC +
Preference number: 2 (lower is better)
Translates to: YTKMTSEWGPLASSICVRVKVIL*CLSSGS
Trigger: GGATCCAGAACTCAGGCATCAAAGGATGACCTTGAC...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTTGTTTCTTCTTTGCTaGCTCTGGCATATCATGAAC +
Preference number: 2 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRLFLLC*LWHIMN
Trigger: GTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAA...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: QCNPTHKESSWDIKAASPSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: QCNPTHKESSWDIKAASPKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGTGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 2 (lower is better)
Translates to: YTKMTSEWGPLASSICVRCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTCACTCTAGGATCGACTaGTTCCTTACAGGTCAACAG +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAHSRID*FLTGQQ
Trigger: CTGTTGACCTGTAAGGAAGCAGTCGATCCTAGAGTG...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGC +
Preference number: 2 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIALFCT*EVEGSR
Trigger: GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTGTCAGTGACTTTCCTTaGGTCACAGTGATTTGGTTC +
Preference number: 2 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCVSDFP*VTVIWF
Trigger: GAACCAAATCACTGTGACTCAAGGAAAGTCACTGAC...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPLLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTCTGCTCCCTCTACCTaGTGCCAGCCCTGTTTAACA +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFSAPST*CQPCLT
Trigger: TGTTAAACAGGGCTGGCATCAGGTAGAGGGAGCAGA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCTATCATTGTAAAAGGTaGGAAATTCCAACGCCTATG +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTYHCKR*EIPTPM
Trigger: CATAGGCGTTGGAATTTCTCACCTTTTACAATGATA...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACTATCATTGTAAAAGGTaGGAAATTCCAACGCCTATG +
Preference number: 2 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHYHCKR*EIPTPM
Trigger: CATAGGCGTTGGAATTTCTCACCTTTTACAATGATA...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCCACTGTTTAACTTTGTaGTATTCTCCTGAAGGTCAT +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTHCLTL*YSPEGH
Trigger: ATGACCTTCAGGAGAATATCACAAAGTTAAACAGTG...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTT +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFHKAKL*SPRVIF
Trigger: AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCATCTATTGTTCACACTaGATTAAGCTGGAAGACCAA +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTIYCSH*IKLEDQ
Trigger: TTGGTCTTCCAGCTTAATGCAGTGTGAACAATAGAT...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAATCAGGTCACCACTCTaGTCCCTCTACCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRIRSPL*SLYLMP
Trigger: TGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGAT...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACCGTTTCTGAGACTTTaGCAGCTGAAAGGACTTAGT +
Preference number: 2 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQPFLRL*QLKGLS
Trigger: ACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGCAAACCACATTTTGTaGGGCAACTGCTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIANHIL*GNCFPI
Trigger: TATGGGGAAGCAGTTGCCCCACAAAATGTGGTTTGC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCCACTTCAATCTTGTTaGTGTCATCGTGACAGCTGG +
Preference number: 2 (lower is better)
Translates to: YTKMTSEWGPLASSICVRPLQSC*CHRDSW
Trigger: CCAGCTGTCACGATGACACCAACAAGATTGAAGTGG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 2 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCACAACCTTTGCTTATaGTTCCATTCACCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSHNLCL*FHSPKE
Trigger: CTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTGGCAGGAATAACACCTaGCCACTAAACAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCGRNNT*PLNRKF
Trigger: GAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNGDGLA*TLRGCN
Trigger: ATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCC...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCAGCCCTGCAGAGGTTaGTGCTTGCTTCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFQPCRG*CLLLLS
Trigger: AGAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTA +
Preference number: 2 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTSFQQW*SIFNSL
Trigger: TAAACTGTTGAATATGCTGCACCATTGCTGAAATGA...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGGTGTAAAACGCTTGTaGATCTTAGGAACCCAAATC +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAGVKRL*ILGTQI
Trigger: GATTTGGGTTCCTAAGATGCACAAGCGTTTTACACC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGCTTACTCCTCAAATTTaGATTCTAAGTCGATCACAG +
Preference number: 2 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVLTPQI*ILSRSQ
Trigger: CTGTGATCGACTTAGAATCCAAATTTGAGGAGTAAG...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACATAGGAGACAACTCTaGATCCTTCAGAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQHRRQL*ILQRNP
Trigger: AGGATTTCTCTGAAGGATCCAGAGTTGTCTCCTATG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCTTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: QCNPTHKESSWDIKAASPFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 2 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGGTGACAAGCCACAGCTaGTTCCAAATAAGAACATTC +
Preference number: 2 (lower is better)
Translates to: YTKMTSEWGPLASSICVRVTSHS*FQIRTF
Trigger: GAATGTTCTTATTTGGAAGCAGCTGTGGCTTGTCAC...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 2 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAATCAGGTCACCACTCTaGTCCCTCTACCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPIRSPL*SLYLMP
Trigger: TGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGAT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCTCAAAAACAATACCTaGCCACCAAATCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFLKNNT*PPNQKG
Trigger: TCCCTTCTGATTTGGTGGGCAGGTATTGTTTTTGAG...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 2 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTCACACCAGATTCATTaGTCCCAATGCAAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSSHQIH*SQCKSL
Trigger: TAGACTTTTGCATTGGGACCAATGAATCTGGTGTGA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: AVRETEQKRSYSGGENGSTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPNSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTACCATTTCAATTTGGTaGTACCCAAAGGGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFTISIW*YPKGFL
Trigger: CAGAAAACCCTTTGGGTATCACCAAATTGAAATGGT...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACAAAAACTAACACGATaGCAGGAGCTATCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRQKLTR*QELSGH
Trigger: GTGACCTGATAGCTCCTGTCATCGTGTTAGTTTTTG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATCACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGTCCTGTCTTCCGTTTaGAGCCTTCAGGGTAAAGGA +
Preference number: 2 (lower is better)
Translates to: WVLVELITTGVKRLCILGVLSSV*SLQGKG
Trigger: TCCTTTACCCTGAAGGCTTCAAACGGAAGACAGGAC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 2 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTCAGAAGTATTACGTTaGCACCAGAGATGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAASEVLR*HQRCFS
Trigger: ACTAAAACATCTCTGGTGCCAACGTAATACTTCTGA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGACATAAAGAGTCATCCTaGGACATAAAGGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PPESSFISAMVQHIQQFRHKESS*DIKAAS
Trigger: GCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATG...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAGCAAACCACATTTTGTaGGGCAACTGCTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: PPESSFISAMVQHIQQFRANHIL*GNCFPI
Trigger: TATGGGGAAGCAGTTGCCCCACAAAATGTGGTTTGC...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACA +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPTVSIS*CSFTTT
Trigger: TGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGT...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATGAAGGTCATTTGCAGTaGCCTCCAGGTCAACAAGTT +
Preference number: 2 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNEGHLQ*PPGQQV
Trigger: AACTTGTTGACCTGGAGGTCACTGCAAATGACCTTC...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGGACTTAGTATGACATaGAGCTATGAGGTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCGLSMT*SYEVKV
Trigger: GACCTTGACCTCATAGCTTCATGTCATACTAAGTCC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: PPESSFISAMVQHIQQFRKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 2 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATACTTTCATTTCAGCAATaGTGCAGCATATTCAACAGT +
Preference number: 2 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMILSFQQ*CSIFNS
Trigger: ACTGTTGAATATGCTGCACCATTGCTGAAATGAAAG...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCTCAGGAGGAGAGAATaGCTCTGTTCTGACACTCTA +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLRRRE*LCSDTL
Trigger: TAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFNSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAACCATTTCAATTTGGTaGTACCCAAAGGGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRTISIW*YPKGFL
Trigger: CAGAAAACCCTTTGGGTATCACCAAATTGAAATGGT...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 2 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 2 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR CCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTCACACCAGATTCATTaGTCCCAATGCAAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: LITTGVKRLCILGTQIFPSHQIH*SQCKSL
Trigger: TAGACTTTTGCATTGGGACCAATGAATCTGGTGTGA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTCTATCCAACACAAGTaGACACACCAAATCCAAAAG +
Preference number: 2 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRSIQHK*THQIQK
Trigger: CTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCTTCTTTTTCTTTTCTaGCATCATCTGATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFLLFLF*HHLISQ
Trigger: CTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 2 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 2 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGTGACAAGCCACAGCTaGTTCCAAATAAGAACATTC +
Preference number: 2 (lower is better)
Translates to: WVLVELITTGVKRLCILGVTSHS*FQIRTF
Trigger: GAATGTTCTTATTTGGAAGCAGCTGTGGCTTGTCAC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTATTTTTCTCCACTATTaGTGTTACAGCAGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFIFLHY*CYSSKS
Trigger: GCTTTTGCTGCTGTAACAGCAATAGTGGAGAAAAAT...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCTCAAAAACAATACCTaGCCACCAAATCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLKNNT*PPNQKG
Trigger: TCCCTTCTGATTTGGTGGGCAGGTATTGTTTTTGAG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCTTACTCCTCAAATTTaGATTCTAAGTCGATCACAG +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFLTPQI*ILSRSQ
Trigger: CTGTGATCGACTTAGAATCCAAATTTGAGGAGTAAG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAACTCTGTTAAATACTaGCTCAAAAACAATACCTGC +
Preference number: 2 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSNSVKY*LKNNTC
Trigger: GCAGGTATTGTTTTTGAGCCAGTATTTAACAGAGTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATTTGATGCCTGAGTTCTaGATCCCAAATAGTGCAATC +
Preference number: 2 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNLMPEF*IPNSAI
Trigger: GATTGCACTATTTGGGATCCAGAACTCAGGCATCAA...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATGGTGTCTGGGTCAATaGTTGCTTATTAAACTGTCT +
Preference number: 2 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPWCLGQ*LLIKLS
Trigger: AGACAGTTTAATAAGCAATCATTGACCCAGACACCA...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTA +
Preference number: 2 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFSFQQW*SIFNSL
Trigger: TAAACTGTTGAATATGCTGCACCATTGCTGAAATGA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR CCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 2 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCTTACTCCTCAAATTTaGATTCTAAGTCGATCACAG +
Preference number: 2 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLTPQI*ILSRSQ
Trigger: CTGTGATCGACTTAGAATCCAAATTTGAGGAGTAAG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTA +
Preference number: 2 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLSRPGV*VNDCLL
Trigger: TAATAAGCAATCATTGACCCAGACACCAGGGCGAGA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR GCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 2 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 2 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR TCA 72 bp CCCCATAGTGGCCTGACTCGGCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCCACAGAGCCAGGCACA +
Preference number: 3 (lower is better)
Translates to: PHSGLTRLQPTG*EGLYSSTEPGT
Trigger: TGTGCCTGGCTCTGTGGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 72 bp CTATCTGTCCCCAGACATGGCCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGTGGCCTCACACACTCC +
Preference number: 3 (lower is better)
Translates to: LSVPRHGQGRAP*LFSTGCGLTHS
Trigger: GGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGCCATGTCTGGGGACAGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 72 bp CTATTGCTGTTACAGCAGCAAAAGCAGCAGAAAGGCTaGCAGAGGGGGCTGCCAGCTGGGCACAAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: LLLLQQQKQQKG*QRGLPAGHKAK
Trigger: CTTGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGCCTTTCTGCTGCTTTTGCTGCTGTAACAGCAATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 72 bp CCACTGAAGGAGCGCGAACGAGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: PLKERERALFCT*EVEGSRPGVWV
Trigger: GACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCGCGCTCCTTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CAA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCTAAAAATCACCTGGTaGCATGGCCAGTCACTGTGG +
Preference number: 3 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSLKITW*HGQSLW
Trigger: CCACAGTGACTGGCCATGCAACCAGGTGATTTTTAG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp GGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGACGGCAGTATTTTCAAC +
Preference number: 3 (lower is better)
Translates to: GCMASHCGARSQ*PQVLLDGSIFN
Trigger: GTTGAAAATACTGCCGTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 72 bp AACAGAACAGATACCTCCGGAGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACTAGCCCATTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: NRTDTSGAPRCH*SQQPSTSPFPK
Trigger: CTTGGGAAATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTATCTGTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCCCAAGGGTGTTCCCTaGTCCTTCCTGAATGACTCT +
Preference number: 3 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHPKGVP*SFLNDS
Trigger: AGAGTCATTCAGGAAGGACAAGGGAACACCCTTGGG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp CAGGAGCTATCAGGTCACCACTCTGCTCCCTCTACCTaGTGCCAGCCCTGTTTAACAGACCATAGCACCACT +
Preference number: 3 (lower is better)
Translates to: QELSGHHSAPST*CQPCLTDHSTT
Trigger: AGTGGTGCTATGGTCTGTTAAACAGGGCTGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGATAGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATCCCAGAACACAACCTTaGCTTATGATTCCATTCACC +
Preference number: 3 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHPRTQP*LMIPFT
Trigger: GGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGG...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 72 bp TCTGATCCTAACTTCCTCTCAGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAATGTAATCCCACCCATA +
Preference number: 3 (lower is better)
Translates to: SDPNFLSGDGLA*TLRGCNVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAGAGGAAGTTAGGATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 72 bp TGGCATATCATGAACGTGTTGAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTGGGTCTCCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: WHIMNVLKQLSQ*LFRMVLGLLLV
Trigger: CACCAGGAGGAGACCCAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTTCAACACGTTCATGATATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR CCA 72 bp CAAGCACTCAGGCTATTATGTCCCACACCTCCTCGCTaGCCTGCTTCTGTCAACTCTACGCTGGTAGAAGAT +
Preference number: 3 (lower is better)
Translates to: QALRLLCPTPPR*PASVNSTLVED
Trigger: ATCTTCTACCAGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGTGTGGGACATAATAGCCTGAGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 3 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 3 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFLSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGGGTCAAGGTCATCCTTaGATGCCTGAGTTCTGGATC +
Preference number: 3 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVGQGHP*MPEFWI
Trigger: GATCCAGAACTCAGGCATCAAAGGATGACCTTGACC...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CAA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGTGCAGAGGTTGCTGCTaGCTTCTTCTTTCTGATCCT +
Preference number: 3 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVCRGCC*LLLSDP
Trigger: AGGATCAGAAAGAAGAAGCAAGCAGCAACCTCTGCA...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCGAATACCATTTCAATTaGGTGATACCCAAAGGGTTT +
Preference number: 3 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSEYHFN*VIPKGF
Trigger: AAACCCTTTGGGTATCACCAAATTGAAATGGTATTC...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGGACAAAGGCAACCCTaGCTCTGCAGAAAGAACCCT +
Preference number: 3 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAGQRQP*LCRKNP
Trigger: AGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTCC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp CTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCAGTCGGGTCACGGTAT +
Preference number: 3 (lower is better)
Translates to: LSQKAQLANIIQ*VGLEVSVGSRY
Trigger: ATACCGTGACCCGACTGATACCTCTAACCCCACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR TCA 72 bp CTGGCCCCATCTCCAAATTACCACCTGTGTCCCTTCTaGCAAAGAGAGGGCGGAACAGTAACACTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: LAPSPNYHLCPF*QREGGTVTLLE
Trigger: TTCAAGGAGTGTTACTGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGGTGGTAATTTGGAGATGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 3 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp AGGTCAAAGCCATGCCACTGCTCTATCCAACACAAGTaGACACACCAAATCCAAAAGCCAGAAGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RSKPCHCSIQHK*THQIQKPEALA
Trigger: GGCCAGAGCTTCTGGCTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGAGCAGTGGCATGGCTTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 72 bp GGTTCACACAGTACAGTCTGGACCAGGAAGGTGGCCTaGAGTTTAATATGTGTATCCCTCTGGCACAAACAC +
Preference number: 3 (lower is better)
Translates to: GSHSTVWTRKVA*SLICVSLWHKH
Trigger: GTGTTTGTGCCAGAGGGATACACATATTAAACTGCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTACCTGCTCCTGTTTaGGCCCTCAGGTACAGTCAG +
Preference number: 3 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSLPAPV*ALRYSQ
Trigger: CTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp AACGTTCCTACTCAGGAGGAGAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGCTTCCTTACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: NVPTQEERMALF*HSRIDCFLTGQ
Trigger: TTGACCTGTAAGGAAGCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAGTAGGAACGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 72 bp CCCTTGTCCTTCCTGAATGACTCTGGAAGGACATTCTaGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGT +
Preference number: 3 (lower is better)
Translates to: PLSFLNDSGRTF*VKSFPLRRINC
Trigger: ACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGAGTCATTCAGGAAGGACAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTCAGCCCTGCAGAGGTaGCTGCTTGCTTCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: LITTGVKRLCILGTQIFPSALQR*LLASSF
Trigger: GAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTGA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGTAAAGAGCTTTCCTTaGCGGAGGATCAACTGTAGT +
Preference number: 3 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAVKSFP*RRINCS
Trigger: ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTAC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCATATCATGAACGTGTaGAAACAGCTCTCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: AVRETEQKRSYSGGENGSHIMNV*KQLSQC
Trigger: GCACTGAGAGAGCTGTTTCAACACGTTCATGATATG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 3 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR-3UTR CAA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 3 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVLSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGG +
Preference number: 3 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRRTSPL*YLGSRR
Trigger: CCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR TCA 72 bp CTTCTGACAAAGAGAGGGCGGAACAGTAACACTCCTTaGACATTGGTGACAAGCCACAGCTGCTTCCAAATA +
Preference number: 3 (lower is better)
Translates to: LLTKRGRNSNTP*TLVTSHSCFQI
Trigger: TATTTGGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTTCCGCCCTCTCTTTGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp CTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACAGCAGGGTTTTTCACA +
Preference number: 3 (lower is better)
Translates to: LLFWPSGTVSIS*CSFTTTAGFFT
Trigger: TGTGAAAAACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR GCA 72 bp CGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGTCCAAGCTTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: RVTVLVGFDNSK*SKQAASPSFAV
Trigger: CACAGCAAAGCTTGGACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
3UTR GCA 72 bp GGCAGGAATAACACCTGCCCACTAAACAGAAAATTCTaGATGGACCATAGGAGACAACTCTGGATCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GRNNTCPLNRKF*MDHRRQLWILQ
Trigger: CTGAAGGATCCAGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR CCA 72 bp TTCAGGGTAAAGGAGGGCAGAGATAAGGCTCTCTCCTaGGGAAAGGAGTTCTACACAAAAATGACCTCAGAA +
Preference number: 3 (lower is better)
Translates to: FRVKEGRDKALS*GKEFYTKMTSE
Trigger: TTCTGAGGTCATTTTTGTGTAGAACTCCTTTCCCCAGGAGAGAGCCTTATCTCTGCCCTCCTTTACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTCAGAAGGCACAGCTaGCAAACATCATCCAGTGAG +
Preference number: 3 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRLRRHS*QTSSSE
Trigger: CTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGAG...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATTCAGCCCTGCAGAGGTaGCTGCTTGCTTCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNSALQR*LLASSF
Trigger: GAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTGA...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTTTACCTGCTCCTGTTTaGGCCCTCAGGTACAGTCAG +
Preference number: 3 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLPAPV*ALRYSQ
Trigger: CTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGTAAAGAGCTTTCCTTaGCGGAGGATCAACTGTAGT +
Preference number: 3 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSVKSFP*RRINCS
Trigger: ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTAC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 3 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 3 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCLSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTGCAGAGGTTGCTGCTaGCTTCTTCTTTCTGATCCT +
Preference number: 3 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRCRGCC*LLLSDP
Trigger: AGGATCAGAAAGAAGAAGCAAGCAGCAACCTCTGCA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGAATACCATTTCAATTaGGTGATACCCAAAGGGTTT +
Preference number: 3 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIEYHFN*VIPKGF
Trigger: AAACCCTTTGGGTATCACCAAATTGAAATGGTATTC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp TCTCTTATGCTGTCAGTGACTTTCCTTGAGTCACAGTaGTTTGGTTCAGAAGTATTACGTTGGCACCAGAGA +
Preference number: 3 (lower is better)
Translates to: SLMLSVTFLESQ*FGSEVLRWHQR
Trigger: TCTCTGGTGCCAACGTAATACTTCTGAACCAAATCACTGTGACTCAAGGAAAGTCACTGACAGCATAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp TCCCTTCAGACCACTTCAATCTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAAATAATAAGTTCCTAT +
Preference number: 3 (lower is better)
Translates to: SLQTTSILLVSS*QLESQKIISSY
Trigger: ATAGGAACTTATTATTTTCTGGCTCTCCAGCTGTCACGATGACACCAACAAGATTGAAGTGGTCTGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR GCA 72 bp CTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTAGAAATAGGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: LLPQSHLSFQQW*SIFNSLEIGQQ
Trigger: TTGCTGACCTATTTCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CCA 72 bp TGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTAAACTGTCTAATAAGT +
Preference number: 3 (lower is better)
Translates to: CTWEVEGSRPGV*VNDCLLNCLIS
Trigger: ACTTATTAGACAGTTTAATAAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR-3UTR CAA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGTAAAGAGCTTTCCTTaGCGGAGGATCAACTGTAGT +
Preference number: 3 (lower is better)
Translates to: WVLVELITTGVKRLCILGVKSFP*RRINCS
Trigger: ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTAC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR-3UTR CAA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAGCTTACTCCTCAAATTaGGATTCTAAGTCGATCACA +
Preference number: 3 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPAYSSN*DSKSIT
Trigger: TGTGATCGACTTAGAATCCAAATTTGAGGAGTAAGC...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR TCA 72 bp GGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCAATaGTTGCTTATTAAACTGTCTAATAAGTTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: GSRRFSPWCLGQ*LLIKLSNKLFL
Trigger: AAGAAACAACTTATTAGACAGTTTAATAAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
3UTR TCA 72 bp TTAGCAAACTTCTCTTATGCTGTCAGTGACTTTCCTTaGGTCACAGTGATTTGGTTCAGAAGTATTACGTTG +
Preference number: 3 (lower is better)
Translates to: LANFSYAVSDFP*VTVIWFRSITL
Trigger: CAACGTAATACTTCTGAACCAAATCACTGTGACTCAAGGAAAGTCACTGACAGCATAAGAGAAGTTTGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAAAGCAGCAGAAAGGCTaGCAGAGGGGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPKQQKG*QRGLPA
Trigger: AGCTGGCAGCCCCCTCTGCCAGCCTTTCTGCTGCTT...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATGGCCAGTCACTGTaGGGCACGTTCCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFHGQSL*GTFPVT
Trigger: GGTCACTGGGAACGTGCCCCACAGTGACTGGCCATG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPGDGLA*TLRGCN
Trigger: ATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTACTTCCCCCATCAGCTaGGCCAACTCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFTSPIS*ANSVPG
Trigger: ACCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGT...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEGARSQ*PQVLLD
Trigger: GTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCC...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGCCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGGCCGGATTCGCGGGCTaGCACCTCCCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVAGFAG*HLPFTL
Trigger: CAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGC...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFKQLSQ*LFRMVL
Trigger: CAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTT...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATCAGGTCACCACTCTaGTCCCTCTACCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSIRSPL*SLYLMP
Trigger: TGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGAT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPALFCT*EVEGSR
Trigger: GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGTCACACAGTACAGTCTaGACCAGGAAGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPESHSTV*TRKVAC
Trigger: GCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGA...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHQGRAP*LFSTGC
Trigger: ACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTG...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCTGCAGAAAGAACCCTaGGGTGAGGGAATATTTCCC +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFLQKEP*GEGIFP
Trigger: GGGAAATATTCCCTCACCCCAGGGTTCTTTCTGCAG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGC +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSRMALF*HSRIDC
Trigger: GCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCGTCCTGTCTTCCGTTTaGAGCCTTCAGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSVLSSV*SLQGKG
Trigger: TCCTTTACCCTGAAGGCTTCAAACGGAAGACAGGAC...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCACCTTGTTTCTCTTGTTaGGCAAGCTCAGGGATAGGA +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPPCFSC*ASSGIG
Trigger: TCCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGG...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCCACAGGACATGGGGTaGAAACATAAGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSPQDMG*KHKGKV
Trigger: AACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGGAGACGGTCTAGCCTaGACCCTCAGAGGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTGDGLA*TLRGCN
Trigger: ATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCCACTTCAATCTTGTTaGTGTCATCGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFPLQSC*CHRDSW
Trigger: CCAGCTGTCACGATGACACCAACAAGATTGAAGTGG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIRPEES*CWASPA
Trigger: GGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCT...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCAGTGACTTTCCTTaGGTCACAGTGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPVSDFP*VTVIWF
Trigger: GAACCAAATCACTGTGACTCAAGGAAAGTCACTGAC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATCTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHLLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTTCCCCATAGTGGCCTaGCTCGGCTCCAACCCACAG +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVFPIVA*LGSNPQ
Trigger: CTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGGAA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCCTTGTTTCTCTTGTTaGGCAAGCTCAGGGATAGGA +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSPCFSC*ASSGIG
Trigger: TCCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGTTACGGTTCGTTACCTaGTCCTGTTTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPELRFVT*SCFGPQ
Trigger: CTGAGGGCCAAAACAGGAGCAGGTAACGAACCGTAA...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATATGAGGAAGAGCAACTaGAGAGCCTCAATTTGCCGG +
Preference number: 4 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHMRKSN*RASICR
Trigger: CCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCAT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGTTTGGCCACAGGACATaGGGTGCAAACATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEFGHRT*GANIRA
Trigger: TGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAA...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGAGGGGGCTGCCAGCTaGGCACAAGGCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIEGAAS*AQGQAL
Trigger: CAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGAAGCAGCAGAAAGGCTaGCAGAGGGGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVKQQKG*QRGLPA
Trigger: AGCTGGCAGCCCCCTCTGCCAGCCTTTCTGCTGCTT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTCACCTGTGTCCCTTCTaGCAAAGAGAGGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGHLCPF*QREGGT
Trigger: TGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGGTG...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPLQPTG*EGLYSS
Trigger: GGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAG...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTACAGTGGGTTTTAGTTaGGTTAATCACCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFTVGFS*VNHHWC
Trigger: ACACCAGTGGTGATTAACTCAACTAAAACCCACTGT...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGGCAGGAATAACACCTaGCCACTAAACAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPGRNNT*PLNRKF
Trigger: GAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCATCAGGTCACCACTCTaGTCCCTCTACCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTIRSPL*SLYLMP
Trigger: TGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGAT...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATTCACAAAACTGCAGATaGCATCACTCCGGCCGGATT +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHSQNCR*HHSGRI
Trigger: AATCCGGCCGGAGTGATGCCATCTGCAGTTTTGTGA...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTTTGATGCCTGAGTTCTaGATCCCAAATAGTGCAATC +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFLMPEF*IPNSAI
Trigger: GATTGCACTATTTGGGATCCAGAACTCAGGCATCAA...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGGCAAACCACATTTTGTaGGGCAACTGCTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEANHIL*GNCFPI
Trigger: TATGGGGAAGCAGTTGCCCCACAAAATGTGGTTTGC...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CGAGCCCTCTTTTGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCTACCTGCTCCTGTTTTaGCCCTCAGGTACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: RALFCTWEVEGSRPGVWVYLLLF*PSGTVS
Trigger: ACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTA...GACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGCTCAGGAGGAGAGAATaGCTCTGTTCTGACACTCTA +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPELRRRE*LCSDTL
Trigger: TAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAG...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
3UTR CAA 72 bp AATAAGCCCACTGAAGGAGCGCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NKPTEGARTSPL*YLGSRRFSPWC
Trigger: ACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCGCGCTCCTTCAGTGGGCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR TCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVRPEES*CWASPA
Trigger: GGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSATSFE*NSPDSK
Trigger: CTTGGAATCAGGGGAATTTCACTCAAATGATGTTGC...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRLLVSS*QLESQK
Trigger: TTTCTGGCTCTCCAGCTGTCACGATGACACCAACAA...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCATCTATCCAACACAAGTaGACACACCAAATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPSIQHK*THQIQK
Trigger: CTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGA...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQLQPTG*EGLYSS
Trigger: GGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTGAAGGGAAGAATCATTaGAGATCACAAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFEGKNH*RSQNCR
Trigger: TCTGCAGTTTTGTGATCTGCAATGATTCTTCCCTTC...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCCCCCTGCTACATGCTaGTCTCTGGGCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFPPATC*SLGRHQ
Trigger: CTGGTGTCTGCCCAGAGAGCAGCATGTAGCAGGGGG...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATACCAGGAAGGTGGCCTaGAGTTTAATATGTGTATCC +
Preference number: 4 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHTRKVA*SLICVS
Trigger: GGATACACATATTAAACTGCAGGCCACCTTCCTGGT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCACCTCCTCGCTGGCCTaGTTCTGTCAACTCTACGCT +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPTSSLA*FCQLYA
Trigger: AGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGT...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCC +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVAFLRQ*GPKYHS
Trigger: GGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGC...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTAGTGCCTCTTCCGTATaGTGCTGGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCSASSV*CWVSSW
Trigger: CCAGGAGGAGACCCAGCACCATACGGAAGAGGCACT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGGACAGCAGCCTTCTGTaGCAAATGATAAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEDSSLL*QMIKGV
Trigger: AACCCCTTTTATCATTTGCCACAGAAGGCTGCTGTC...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCATGGCCAGTCACTGTaGGGCACGTTCCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFHGQSL*GTFPVT
Trigger: GGTCACTGGGAACGTGCCCCACAGTGACTGGCCATG...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCAATCACCTGGTTGCATaGCCAGTCACTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPNHLVA*PVTVGH
Trigger: GTGCCCCACAGTGACTGGCCATGCAACCAGGTGATT...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCRPEES*CWASPA
Trigger: GGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 4 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTCTGCTCCCTCTACCTaGTGCCAGCCCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGSAPST*CQPCLT
Trigger: TGTTAAACAGGGCTGGCATCAGGTAGAGGGAGCAGA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCATATCATTGTAAAAGGTaGGAAATTCCAACGCCTATG +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPYHCKR*EIPTPM
Trigger: CATAGGCGTTGGAATTTCTCACCTTTTACAATGATA...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSGARSQ*PQVLLD
Trigger: GTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCCTTGTTTCTCTTGTTaGGCAAGCTCAGGGATAGGA +
Preference number: 4 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHPCFSC*ASSGIG
Trigger: TCCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCACTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCATTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAGCTGGCAGAGGGGGCTaGCAGCTGGGCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPAGRGG*QLGTRP
Trigger: TGGCCTTGTGCCCAGCTGGCAGCCCCCTCTGCCAGC...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGATCAGGTCACCACTCTaGTCCCTCTACCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVIRSPL*SLYLMP
Trigger: TGGCATCAGGTAGAGGGAGCAGAGTGGTGACCTGAT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFAPRCH*SQQPST
Trigger: AGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGC...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIAPRCH*SQQPST
Trigger: AGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTACCTCCTCGCTGGCCTaGTTCTGTCAACTCTACGCT +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCTSSLA*FCQLYA
Trigger: AGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTTGTTTCTTTGCTGTCTaGTATAGGAGATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFCFFAV*YRRSSN
Trigger: ATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGCCACTTCAATCTTGTTaGTGTCATCGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRPLQSC*CHRDSW
Trigger: CCAGCTGTCACGATGACACCAACAAGATTGAAGTGG...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGGTCCAAGCTTTGCTGTaGGCAGGAATAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVVQALL*AGITPA
Trigger: GGCAGGTGTTATTCCTGCCCACAGCAAAGCTTGGAC...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCCATAAAGAGTCATCCTaGGACATAAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTHKESS*DIKAAS
Trigger: GCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATG...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCTTTCATTTCAGCAATaGTGCAGCATATTCAACAGT +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFLSFQQ*CSIFNS
Trigger: ACTGTTGAATATGCTGCACCATTGCTGAAATGAAAG...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAGAGGGGGCTGCCAGCTaGGCACAAGGCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFREGAAS*AQGQAL
Trigger: CAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTC...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTGAGGGGGCTGCCAGCTaGGCACAAGGCCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIREGAAS*AQGQAL
Trigger: CAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCTC...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTTCACACAGTACAGTCTaGACCAGGAAGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCSHSTV*TRKVAC
Trigger: GCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGA...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTCATGGCCAGTCACTGTaGGGCACGTTCCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSHGQSL*GTFPVT
Trigger: GGTCACTGGGAACGTGCCCCACAGTGACTGGCCATG...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTGTCAAGGTCATCCTTTaGTGCCTGAGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGVKVIL*CLSSGS
Trigger: GGATCCAGAACTCAGGCATCAAAGGATGACCTTGAC...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGGACTTAGTATGACATaGAGCTATGAGGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTGLSMT*SYEVKV
Trigger: GACCTTGACCTCATAGCTTCATGTCATACTAAGTCC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGTGGTGTCTGGGTCAATaGTTGCTTATTAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEWCLGQ*LLIKLS
Trigger: AGACAGTTTAATAAGCAATCATTGACCCAGACACCA...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGANIIQ*VGLEVS
Trigger: TGATACCTCTAACCCCACTCACTGGATGATGTTTGC...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCACCTGTGTCCCTTCTaGCAAAGAGAGGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRHLCPF*QREGGT
Trigger: TGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGGTG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTTCCCCATAGTGGCCTaGCTCGGCTCCAACCCACAG +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVFPIVA*LGSNPQ
Trigger: CTGTGGGTTGGAGCCGAGTCAGGCCACTATGGGGAA...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGACCATTTCAATTTGGTaGTACCCAAAGGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPETISIW*YPKGFL
Trigger: CAGAAAACCCTTTGGGTATCACCAAATTGAAATGGT...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTCTGCTCCCTCTACCTaGTGCCAGCCCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAASAPST*CQPCLT
Trigger: TGTTAAACAGGGCTGGCATCAGGTAGAGGGAGCAGA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGAAGGTCATTTGCAGTaGCCTCCAGGTCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGEGHLQ*PPGQQV
Trigger: AACTTGTTGACCTGGAGGTCACTGCAAATGACCTTC...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCTCCCCTTCACTCTGTaGCTCAGTCGCCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRLPFTL*LSRHLR
Trigger: ACGAAGATGGCGACTGAGGCACAGAGTGAAGGGGAG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358308.7
ENST00000358531.9
CDS-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGCATCCCTTAAAATCTaGTGTCGGACACTATTACCC +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTASLKI*CRTLLP
Trigger: GGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCCACAGGACATGGGGTaGAAACATAAGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPPQDMG*KHKGKV
Trigger: AACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGG...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCCACAGGACATGGGGTaGAAACATAAGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVPQDMG*KHKGKV
Trigger: AACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTCACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCHKAKL*SPRVIF
Trigger: AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTG...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQHKAKL*SPRVIF
Trigger: AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATCTCAAAAACAATACCTaGCCACCAAATCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHLKNNT*PPNQKG
Trigger: TCCCTTCTGATTTGGTGGGCAGGTATTGTTTTTGAG...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACACCAGGAAGGTGGCCTaGAGTTTAATATGTGTATCC +
Preference number: 4 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHTRKVA*SLICVS
Trigger: GGATACACATATTAAACTGCAGGCCACCTTCCTGGT...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACGGCAGTATTTTCAACTaGATGCTAACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHGSIFN*MLTQAA
Trigger: AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCC...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGGCAGTATTTTCAACTaGATGCTAACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTGSIFN*MLTQAA
Trigger: AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTTTGGCCACAGGACATaGGGTGCAAACATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVFGHRT*GANIRA
Trigger: TGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGGACAGCAGCCTTCTGTaGCAAATGATAAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRDSSLL*QMIKGV
Trigger: AACCCCTTTTATCATTTGCCACAGAAGGCTGCTGTC...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTAACTCTGTTAAATACTaGCTCAAAAACAATACCTGC +
Preference number: 4 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFNSVKY*LKNNTC
Trigger: GCAGGTATTGTTTTTGAGCCAGTATTTAACAGAGTT...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATATCACACAGTACAGTCTaGACCAGGAAGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMISHSTV*TRKVAC
Trigger: GCAGGCCACCTTCCTGGTCCAGACTGTACTGTGTGA...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCTACCTGCTCCTGTTTTaGCCCTCAGGTACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPYLLLF*PSGTVS
Trigger: ACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTA...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGANIIQ*VGLEVS
Trigger: TGATACCTCTAACCCCACTCACTGGATGATGTTTGC...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCTCCAACCCACAGGGTaGGAAGGGTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPLQPTG*EGLYSS
Trigger: GGAGCTGTACAACCCTTCTCACCCTGTGGGTTGGAG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGTATCATTGTAAAAGGTaGGAAATTCCAACGCCTATG +
Preference number: 4 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEYHCKR*EIPTPM
Trigger: CATAGGCGTTGGAATTTCTCACCTTTTACAATGATA...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTGGAGAGCCTCAATTTaGCGGTCCTTGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVWRASI*RSLSGI
Trigger: TATACCAGACAAGGACCGGCAAATTGAGGCTCTCCA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAATGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTTACGGTTCGTTACCTaGTCCTGTTTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAALRFVT*SCFGPQ
Trigger: CTGAGGGCCAAAACAGGAGCAGGTAACGAACCGTAA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTTACGGTTCGTTACCTaGTCCTGTTTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLRFVT*SCFGPQ
Trigger: CTGAGGGCCAAAACAGGAGCAGGTAACGAACCGTAA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTGCACCCAGGTGTCACTaGAGTCAACAGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFAPRCH*SQQPST
Trigger: AGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGC...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATGCCGGATTCGCGGGCTaGCACCTCCCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNAGFAG*HLPFTL
Trigger: CAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGC...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATACATCTTCAGCAAAGTaGCAACATCATTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHTSSAK*QHHLSE
Trigger: TTCACTCAAATGATGTTGCCACTTTGCTGAAGATGT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAATGAGGAAGAGCAACTaGAGAGCCTCAATTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQMRKSN*RASICR
Trigger: CCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCAT...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGAGTGCCTCTTCCGTATaGTGCTGGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKSASSV*CWVSSW
Trigger: CCAGGAGGAGACCCAGCACCATACGGAAGAGGCACT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCGCAAACCACATTTTGTaGGGCAACTGCTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPANHIL*GNCFPI
Trigger: TATGGGGAAGCAGTTGCCCCACAAAATGTGGTTTGC...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFQGRAP*LFSTGC
Trigger: ACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCAGGGGAGGGCTCCATaGCTCTTTAGCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKQGRAP*LFSTGC
Trigger: ACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAANIIQ*VGLEVS
Trigger: TGATACCTCTAACCCCACTCACTGGATGATGTTTGC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCACCTGTGTCCCTTCTaGCAAAGAGAGGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPHLCPF*QREGGT
Trigger: TGTTCCGCCCTCTCTTTGTCAGAAGGGACACAGGTG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCAAAAACTAACACGATaGCAGGAGCTATCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVQKLTR*QELSGH
Trigger: GTGACCTGATAGCTCCTGTCATCGTGTTAGTTTTTG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAATGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTC +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQCCEGN*TETFLL
Trigger: GAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCA...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATAGTCCTGTCTTCCGTTTaGAGCCTTCAGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIVLSSV*SLQGKG
Trigger: TCCTTTACCCTGAAGGCTTCAAACGGAAGACAGGAC...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTCTCCCCTTCACTCTGTaGCTCAGTCGCCATCTTCGT +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVLPFTL*LSRHLR
Trigger: ACGAAGATGGCGACTGAGGCACAGAGTGAAGGGGAG...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358308.7
ENST00000358531.9
CDS-3UTR GCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGGAAGGGAAGAATCATTaGAGATCACAAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPREGKNH*RSQNCR
Trigger: TCTGCAGTTTTGTGATCTGCAATGATTCTTCCCTTC...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTGGTATATCTGGGCAATaGCTTCCTCCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVGISGQ*LPPSVG
Trigger: CCCCACTGACGGAGGAAGGCATTGCCCAGATATACC...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATCCTTTATCATCAAACTaGATCAAATCAGCGATTTTG +
Preference number: 4 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHPLSSN*IKSAIL
Trigger: CAAAATCGCTGATTTGATGCAGTTTGATGATAAAGG...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTGGAGAGCCTCAATTTaGCGGTCCTTGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSWRASI*RSLSGI
Trigger: TATACCAGACAAGGACCGGCAAATTGAGGCTCTCCA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCCGTTTCTGAGACTTTaGCAGCTGAAAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVPFLRL*QLKGLS
Trigger: ACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCCGTTTCTGAGACTTTaGCAGCTGAAAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPPFLRL*QLKGLS
Trigger: ACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGG...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCAGCCCTGCAGAGGTTaGTGCTTGCTTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFQPCRG*CLLLLS
Trigger: AGAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTG...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGGGTAGAAGGTTATGCTaGTTACTCCTCAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRGRRLC*LLLKFG
Trigger: TCCAAATTTGAGGAGTAAGCAGCATAACCTTCTACC...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CTCAGGAGACGGTCTAGCCTGCACCCTCAGAGGGTGCAATGTAATCCCACCCATCAAGGTAGAAGGTTATaGTGCTTACTCCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: LRRRSSLHPQRVQCNPTHQGRRL*CLLLKF
Trigger: AAATTTGAGGAGTAAGCAGCATAACCTTCTACCTTG...ATGGGTGGGATTACATTGCACCCTCTGAGGGTGCAGGCTAGACCGTCTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGGGCAGTATTTTCAACTaGATGCTAACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVGSIFN*MLTQAA
Trigger: AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCC...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTAGGCAACCCTTGCTCTaGAGAAAGAACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVRQPLL*RKNPGV
Trigger: CACCCCAGGGTTCTTTCTGCAGAGCAAGGGTTGCCT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGGCCGGATTCGCGGGCTaGCACCTCCCCTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLAGFAG*HLPFTL
Trigger: CAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGC...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTTCACAAAACTGCAGATaGCATCACTCCGGCCGGATT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFSQNCR*HHSGRI
Trigger: AATCCGGCCGGAGTGATGCCATCTGCAGTTTTGTGA...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCC +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVAFLRQ*GPKYHS
Trigger: GGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGC...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTATCAGTTGGTATATCTaGGCAATGCCTTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSISWYI*AMPSSV
Trigger: GACGGAGGAAGGCATTGCCCAGATATACCAACTGAT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAAGTGCCTCTTCCGTATaGTGCTGGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRSASSV*CWVSSW
Trigger: CCAGGAGGAGACCCAGCACCATACGGAAGAGGCACT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVSRPGV*VNDCLL
Trigger: TAATAAGCAATCATTGACCCAGACACCAGGGCGAGA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAAAGCAGCAGAAAGGCTaGCAGAGGGGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPKQQKG*QRGLPA
Trigger: AGCTGGCAGCCCCCTCTGCCAGCCTTTCTGCTGCTT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAAATCACCTGGTTGCATaGCCAGTCACTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRNHLVA*PVTVGH
Trigger: GTGCCCCACAGTGACTGGCCATGCAACCAGGTGATT...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPATSFE*NSPDSK
Trigger: CTTGGAATCAGGGGAATTTCACTCAAATGATGTTGC...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTGTCAGTGACTTTCCTTaGGTCACAGTGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSVSDFP*VTVIWF
Trigger: GAACCAAATCACTGTGACTCAAGGAAAGTCACTGAC...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRLLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAANSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACAAAAACTAACACGATaGCAGGAGCTATCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQQKLTR*QELSGH
Trigger: GTGACCTGATAGCTCCTGTCATCGTGTTAGTTTTTG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCACAACCTTTGCTTATaGTTCCATTCACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPHNLCL*FHSPKE
Trigger: CTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTG...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTAGTTCTACACAAAAATaGCCTCAGAATGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSSSTQK*PQNGGH
Trigger: ATGGCCCCCATTCTGAGGTCATTTTTGTGTAGAACT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGGGCATCAATAAGTGCTaGAAGTTTCTGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVGINKC*KFLMRH
Trigger: ATGCCTCATCAGAAACTTTCAGCACTTATTGATGCC...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371027.5
CDS-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAGGTATATCTGGGCAATaGCTTCCTCCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRGISGQ*LPPSVG
Trigger: CCCCACTGACGGAGGAAGGCATTGCCCAGATATACC...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSKQLSQ*LFRMVL
Trigger: CAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTACCAGGAAGGTGGCCTaGAGTTTAATATGTGTATCC +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCTRKVA*SLICVS
Trigger: GGATACACATATTAAACTGCAGGCCACCTTCCTGGT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCACTCTAGGATCGACTaGTTCCTTACAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRHSRID*FLTGQQ
Trigger: CTGTTGACCTGTAAGGAAGCAGTCGATCCTAGAGTG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAACCTCCTCGCTGGCCTaGTTCTGTCAACTCTACGCT +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRTSSLA*FCQLYA
Trigger: AGCGTAGAGTTGACAGAAGCAGGCCAGCGAGGAGGT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAAGGCAACCCTTGCTCTaGAGAAAGAACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRRQPLL*RKNPGV
Trigger: CACCCCAGGGTTCTTTCTGCAGAGCAAGGGTTGCCT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGACAAAGGCAACCCTTaGTCTGCAGAAAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSDKGNP*SAERTL
Trigger: CAGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCAFLRQ*GPKYHS
Trigger: GGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTTGCCGGTCCTTGTCTaGTATATTGGTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLPVLV*YIGLVS
Trigger: GGAAACAAGACCAATATACCAGACAAGGACCGGCAA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCTTGATGCCTGAGTTCTaGATCCCAAATAGTGCAATC +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPLMPEF*IPNSAI
Trigger: GATTGCACTATTTGGGATCCAGAACTCAGGCATCAA...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCTCAGAAGTATTACGTTaGCACCAGAGATGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTSEVLR*HQRCFS
Trigger: ACTAAAACATCTCTGGTGCCAACGTAATACTTCTGA...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCCTTTCATTTCAGCAATaGTGCAGCATATTCAACAGT +
Preference number: 4 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTLSFQQ*CSIFNS
Trigger: ACTGTTGAATATGCTGCACCATTGCTGAAATGAAAG...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGACAGCAGCCTTCTGTaGCAAATGATAAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAADSSLL*QMIKGV
Trigger: AACCCCTTTTATCATTTGCCACAGAAGGCTGCTGTC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGTCAAGGTCATCCTTTaGTGCCTGAGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRVKVIL*CLSSGS
Trigger: GGATCCAGAACTCAGGCATCAAAGGATGACCTTGAC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACA +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSTVSIS*CSFTTT
Trigger: TGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACA +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAATVSIS*CSFTTT
Trigger: TGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGT...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAACAGTCAGTATCTCCTaGTGCTCTTTCACTACTACA +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQTVSIS*CSFTTT
Trigger: TGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGT...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTACAGTGGGTTTTAGTTaGGTTAATCACCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSTVGFS*VNHHWC
Trigger: ACACCAGTGGTGATTAACTCAACTAAAACCCACTGT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCAATGATTGCTTAACAGTGGGTTTTAGTTaGGTTAATCACCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: CTWEVEGSRPGVWVNDCLTVGFS*VNHHWC
Trigger: ACACCAGTGGTGATTAACTCAACTAAAACCCACTGT...TAAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTGGTATATCTGGGCAATaGCTTCCTCCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFGISGQ*LPPSVG
Trigger: CCCCACTGACGGAGGAAGGCATTGCCCAGATATACC...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATATCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMISEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTAAGCCCACCTTAGTGTaGTGTATAAGCTGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFKPTLV*CISWLD
Trigger: ATCCAACCAGCTTATACAGCACACTAAGGTGGGCTT...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTCAAGGTAGAAGGTTATaGTGCTTACTCCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGQGRRL*CLLLKF
Trigger: AAATTTGAGGAGTAAGCAGCATAACCTTCTACCTTG...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTGGTGTAAAACGCTTGTaGATCTTAGGAACCCAAATC +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCGVKRL*ILGTQI
Trigger: GATTTGGGTTCCTAAGATGCACAAGCGTTTTACACC...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAGGTGTAAAACGCTTGTaGATCTTAGGAACCCAAATC +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQGVKRL*ILGTQI
Trigger: GATTTGGGTTCCTAAGATGCACAAGCGTTTTACACC...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTAGGCAACCCTTGCTCTaGAGAAAGAACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFRQPLL*RKNPGV
Trigger: CACCCCAGGGTTCTTTCTGCAGAGCAAGGGTTGCCT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCGACAAAGGCAACCCTTaGTCTGCAGAAAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPDKGNP*SAERTL
Trigger: CAGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTC...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTTGATGCCTGAGTTCTaGATCCCAAATAGTGCAATC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLMPEF*IPNSAI
Trigger: GATTGCACTATTTGGGATCCAGAACTCAGGCATCAA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRALFCT*EVEGSR
Trigger: GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGCTTTCATTTCAGCAATaGTGCAGCATATTCAACAGT +
Preference number: 4 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVLSFQQ*CSIFNS
Trigger: ACTGTTGAATATGCTGCACCATTGCTGAAATGAAAG...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAAAATGACCTCAGAATaGGGGCCATTAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSKMTSE*GPLASS
Trigger: GCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGTCAAGGTCATCCTTTaGTGCCTGAGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCVKVIL*CLSSGS
Trigger: GGATCCAGAACTCAGGCATCAAAGGATGACCTTGAC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCTTCTTTTTCTTTTCTaGCATCATCTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVLLFLF*HHLISQ
Trigger: CTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTCTATCCAACACAAGTaGACACACCAAATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAASIQHK*THQIQK
Trigger: CTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCAATGATTGCTTATCTATCCAACACAAGTaGACACACCAAATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CTWEVEGSRPGVWVNDCLSIQHK*THQIQK
Trigger: CTTTTGGATTTGGTGTGTTCACTTGTGTTGGATAGA...TAAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR TCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATACACAACCTTTGCTTATaGTTCCATTCACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIHNLCL*FHSPKE
Trigger: CTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTG...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTC +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKCCEGN*TETFLL
Trigger: GAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTGCTGTGAGGGAAACTaGACAGAAACGTTCCTACTC +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVCCEGN*TETFLL
Trigger: GAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGCA...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCGGGGCACGTTCCCAGTaGCCACAGGTTCTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLGARSQ*PQVLLD
Trigger: GTCTAGGAGAACCTGTGGTCACTGGGAACGTGCCCC...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTAGCGATTTTGAGGTGTaGATTGAAGTGTTTATGTGT +
Preference number: 4 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGSDFEV*IEVFMC
Trigger: ACACATAAACACTTCAATGCACACCTCAAAATCGCT...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTACTAGGTCAAAGCCATaGCACTGCTCTATCCAACAC +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVTRSKP*HCSIQH
Trigger: GTGTTGGATAGAGCAGTGGCATGGCTTTGACCTAGT...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCACAAGGCCAAGCTCTaGTCCCCCAGAGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFHKAKL*SPRVIF
Trigger: AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCATCTATTGTTCACACTaGATTAAGCTGGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: QCNPTHKESSWDIKAASPIYCSH*IKLEDQ
Trigger: TTGGTCTTCCAGCTTAATGCAGTGTGAACAATAGAT...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTGTTTCTTTGCTGTCTaGTATAGGAGATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVCFFAV*YRRSSN
Trigger: ATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGAGTGCCTCTTCCGTATaGTGCTGGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLSASSV*CWVSSW
Trigger: CCAGGAGGAGACCCAGCACCATACGGAAGAGGCACT...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRALFCT*EVEGSR
Trigger: GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGC...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAAATGGCCACAGATTCTaGAGTAGGGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQNGHRF*SRVLLF
Trigger: AAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATT...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTAATGGCCACAGATTCTaGAGTAGGGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSNGHRF*SRVLLF
Trigger: AAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATACATAGGAGACAACTCTaGATCCTTCAGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIHRRQL*ILQRNP
Trigger: AGGATTTCTCTGAAGGATCCAGAGTTGTCTCCTATG...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGTCCAAGCTTTGCTGTaGGCAGGAATAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: WVLVELITTGVKRLCILGVQALL*AGITPA
Trigger: GGCAGGTGTTATTCCTGCCCACAGCAAAGCTTGGAC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTACCTGCTCCTGTTTTaGCCCTCAGGTACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCYLLLF*PSGTVS
Trigger: ACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCTCAGGAGGAGAGAATaGCTCTGTTCTGACACTCTA +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFLRRRE*LCSDTL
Trigger: TAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCAAAATGACCTCAGAATaGGGGCCATTAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPKMTSE*GPLASS
Trigger: GCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTT...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGACTTCCCCCATCAGCTaGGCCAACTCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLTSPIS*ANSVPG
Trigger: ACCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGT...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTTGGTGTCTGGGTCAATaGTTGCTTATTAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFWCLGQ*LLIKLS
Trigger: AGACAGTTTAATAAGCAATCATTGACCCAGACACCA...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCTTCTTTTTCTTTTCTaGCATCATCTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLLFLF*HHLISQ
Trigger: CTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPLLVSS*QLESQK
Trigger: TTTCTGGCTCTCCAGCTGTCACGATGACACCAACAA...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAAGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCCCTAAACACATTGAGTaGGCACTGAAGCCCACCTTA +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCPKHIE*ALKPTL
Trigger: TAAGGTGGGCTTCAGTGCTCACTCAATGTGTTTAGG...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCCTTGAACATTGGTaGCAAGCCACAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNLLEHW*QATAAS
Trigger: GGAAGCAGCTGTGGCTTGTCACCAATGTTCAAGGAG...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKNSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGC +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFRMALF*HSRIDC
Trigger: GCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGAGTTCTACACAAAAATaGCCTCAGAATGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKSSTQK*PQNGGH
Trigger: ATGGCCCCCATTCTGAGGTCATTTTTGTGTAGAACT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAGTCCTGTCTTCCGTTTaGAGCCTTCAGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPVLSSV*SLQGKG
Trigger: TCCTTTACCCTGAAGGCTTCAAACGGAAGACAGGAC...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTCACTGTTTAACTTTGTaGTATTCTCCTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCHCLTL*YSPEGH
Trigger: ATGACCTTCAGGAGAATATCACAAAGTTAAACAGTG...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTGCATCCCTTAAAATCTaGTGTCGGACACTATTACCC +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFASLKI*CRTLLP
Trigger: GGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGC...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTAGCGATTTTGAGGTGTaGATTGAAGTGTTTATGTGT +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCSDFEV*IEVFMC
Trigger: ACACATAAACACTTCAATGCACACCTCAAAATCGCT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAAAATCCTGTCAGCCCTaGAGAGGTTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: WVLVELITTGVKRLCILGKSCQP*RGCCLL
Trigger: AAGCAAGCAGCAACCTCTGCAGGGCTGACAGGATTT...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTATTTTTCTCCACTATTaGTGTTACAGCAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSIFLHY*CYSSKS
Trigger: GCTTTTGCTGCTGTAACAGCAATAGTGGAGAAAAAT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTCTCAAAAACAATACCTaGCCACCAAATCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSLKNNT*PPNQKG
Trigger: TCCCTTCTGATTTGGTGGGCAGGTATTGTTTTTGAG...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCCACTCTAGGATCGACTaGTTCCTTACAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCHSRID*FLTGQQ
Trigger: CTGTTGACCTGTAAGGAAGCAGTCGATCCTAGAGTG...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTGACAAAGGCAACCCTTaGTCTGCAGAAAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFDKGNP*SAERTL
Trigger: CAGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTC...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCACTCCTGAAGGTCATTTaGAGTGACCTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPLLKVI*SDLQVN
Trigger: GTTGACCTGGAGGTCACTGCAAATGACCTTCAGGAG...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR CCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCATCAGTTGGTATATCTaGGCAATGCCTTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCISWYI*AMPSSV
Trigger: GACGGAGGAAGGCATTGCCCAGATATACCAACTGAT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTACATCTTCAGCAAAGTaGCAACATCATTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCTSSAK*QHHLSE
Trigger: TTCACTCAAATGATGTTGCCACTTTGCTGAAGATGT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTTGCCGGTCCTTGTCTaGTATATTGGTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKLPVLV*YIGLVS
Trigger: GGAAACAAGACCAATATACCAGACAAGGACCGGCAA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATATGAGGAAGAGCAACTaGAGAGCCTCAATTTGCCGG +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNMRKSN*RASICR
Trigger: CCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCAT...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTACAGAAAATTCTGCATaGACCATAGGAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFTENSA*TIGDNS
Trigger: AGAGTTGTCTCCTATGGTCCATGCAGAATTTTCTGT...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAAAAAGCCAGAAGCTCTaGCCCCATCTCCAAATTACC +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRKSQKL*PHLQIT
Trigger: GGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTCTTACTCCTCAAATTTaGATTCTAAGTCGATCACAG +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCLTPQI*ILSRSQ
Trigger: CTGTGATCGACTTAGAATCCAAATTTGAGGAGTAAG...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATATCACACCAGATTCATTaGTCCCAATGCAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMISHQIH*SQCKSL
Trigger: TAGACTTTTGCATTGGGACCAATGAATCTGGTGTGA...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRATSFE*NSPDSK
Trigger: CTTGGAATCAGGGGAATTTCACTCAAATGATGTTGC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCTTCTTTTTCTTTTCTaGCATCATCTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRLLFLF*HHLISQ
Trigger: CTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGGCAGGTCAAATACTCTaGTGTCACACCCAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKAGQIL*CHTQEI
Trigger: TATTTCTTGGGTGTGACATCAGAGTATTTGACCTGC...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAAGCACCACTTCGGGATaGAGCACGTCTAAACAAATA +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRSTTSG*STSKQI
Trigger: TATTTGTTTAGACGTGCTTCATCCCGAAGTGGTGCT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTCACAACCTTTGCTTATaGTTCCATTCACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVHNLCL*FHSPKE
Trigger: CTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTG...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATAGAATGGCTCTGTTCTaGCACTCTAGGATCGACTGC +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNRMALF*HSRIDC
Trigger: GCAGTCGATCCTAGAGTGTCAGAACAGAGCCATTCT...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGGTATATCTGGGCAATaGCTTCCTCCGTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSGISGQ*LPPSVG
Trigger: CCCCACTGACGGAGGAAGGCATTGCCCAGATATACC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGCATCCCTTAAAATCTaGTGTCGGACACTATTACCC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCASLKI*CRTLLP
Trigger: GGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTCCTTTATCATCAAACTaGATCAAATCAGCGATTTTG +
Preference number: 4 (lower is better)
Translates to: AVRETEQKRSYSGGENGSPLSSN*IKSAIL
Trigger: CAAAATCGCTGATTTGATGCAGTTTGATGATAAAGG...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATCCACAGGACATGGGGTaGAAACATAAGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNPQDMG*KHKGKV
Trigger: AACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGG...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCCCGTTTCTGAGACTTTaGCAGCTGAAAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCPFLRL*QLKGLS
Trigger: ACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGG...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTGGCAGGAATAACACCTaGCCACTAAACAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFGRNNT*PLNRKF
Trigger: GAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTCAGAAGGCACAGCTTaGAAACATCATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRSEGTA*KHHPVS
Trigger: ACTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATCAGCCCTGCAGAGGTTaGTGCTTGCTTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNQPCRG*CLLLLS
Trigger: AGAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTG...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATACAAGGTAGAAGGTTATaGTGCTTACTCCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMIQGRRL*CLLLKF
Trigger: AAATTTGAGGAGTAAGCAGCATAACCTTCTACCTTG...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACTCAAAAACAATACCTaGCCACCAAATCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRLKNNT*PPNQKG
Trigger: TCCCTTCTGATTTGGTGGGCAGGTATTGTTTTTGAG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCC +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLAFLRQ*GPKYHS
Trigger: GGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGC...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCCACTTCAATCTTGTTaGTGTCATCGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFPLQSC*CHRDSW
Trigger: CCAGCTGTCACGATGACACCAACAAGATTGAAGTGG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATCATAAAGAGTCATCCTaGGACATAAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNHKESS*DIKAAS
Trigger: GCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATG...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTAACTCTGTTAAATACTaGCTCAAAAACAATACCTGC +
Preference number: 4 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCNSVKY*LKNNTC
Trigger: GCAGGTATTGTTTTTGAGCCAGTATTTAACAGAGTT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATCTCAGGAGGAGAGAATaGCTCTGTTCTGACACTCTA +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNLRRRE*LCSDTL
Trigger: TAGAGTGTCAGAACAGAGCCATTCTCTCCTCCTGAG...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTTAAAGATAATGGGCTaGCCTCGAAGGGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCLKIMG*PRREES
Trigger: TGATTCTTCCCTTCGAGGTCAGCCCATTATCTTTAA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCATSFE*NSPDSK
Trigger: CTTGGAATCAGGGGAATTTCACTCAAATGATGTTGC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTGGACTTAGTATGACATaGAGCTATGAGGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFGLSMT*SYEVKV
Trigger: GACCTTGACCTCATAGCTTCATGTCATACTAAGTCC...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTGGTGTCTGGGTCAATaGTTGCTTATTAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKWCLGQ*LLIKLS
Trigger: AGACAGTTTAATAAGCAATCATTGACCCAGACACCA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCACCATTTCAATTTGGTaGTACCCAAAGGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPTISIW*YPKGFL
Trigger: CAGAAAACCCTTTGGGTATCACCAAATTGAAATGGT...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTCTGCTCCCTCTACCTaGTGCCAGCCCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLSAPST*CQPCLT
Trigger: TGTTAAACAGGGCTGGCATCAGGTAGAGGGAGCAGA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTCAAAAACTAACACGATaGCAGGAGCTATCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFQKLTR*QELSGH
Trigger: GTGACCTGATAGCTCCTGTCATCGTGTTAGTTTTTG...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGCACAAGGCCCCAAATTaGCACCACATCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLHKAPN*HHIKAH
Trigger: ATGGGCTTTGATGTGGTGTCAATTTGGGGCCTTGTG...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATGCATCCCTTAAAATCTaGTGTCGGACACTATTACCC +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNASLKI*CRTLLP
Trigger: GGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGC...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCCTTTATCATCAAACTaGATCAAATCAGCGATTTTG +
Preference number: 4 (lower is better)
Translates to: YTKMTSEWGPLASSICVRPLSSN*IKSAIL
Trigger: CAAAATCGCTGATTTGATGCAGTTTGATGATAAAGG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCACCGTTTCTGAGACTTTaGCAGCTGAAAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPPFLRL*QLKGLS
Trigger: ACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGG...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLKQLSQ*LFRMVL
Trigger: CAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTT...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGGCAGGAATAACACCTaGCCACTAAACAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCGRNNT*PLNRKF
Trigger: GAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCGGTGTAAAACGCTTGTaGATCTTAGGAACCCAAATC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCGVKRL*ILGTQI
Trigger: GATTTGGGTTCCTAAGATGCACAAGCGTTTTACACC...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTGCCGGTCCTTGTCTaGTATATTGGTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPLPVLV*YIGLVS
Trigger: GGAAACAAGACCAATATACCAGACAAGGACCGGCAA...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTA +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPSRPGV*VNDCLL
Trigger: TAATAAGCAATCATTGACCCAGACACCAGGGCGAGA...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATTCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTA +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNSRPGV*VNDCLL
Trigger: TAATAAGCAATCATTGACCCAGACACCAGGGCGAGA...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCATAGGAGACAACTCTaGATCCTTCAGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRHRRQL*ILQRNP
Trigger: AGGATTTCTCTGAAGGATCCAGAGTTGTCTCCTATG...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGTCCAAGCTTTGCTGTaGGCAGGAATAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSVQALL*AGITPA
Trigger: GGCAGGTGTTATTCCTGCCCACAGCAAAGCTTGGAC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGTCAAGGTCATCCTTTaGTGCCTGAGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSVKVIL*CLSSGS
Trigger: GGATCCAGAACTCAGGCATCAAAGGATGACCTTGAC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATGGACTTAGTATGACATaGAGCTATGAGGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNGLSMT*SYEVKV
Trigger: GACCTTGACCTCATAGCTTCATGTCATACTAAGTCC...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTTGTTTCTTCTTTGCTaGCTCTGGCATATCATGAAC +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCLFLLC*LWHIMN
Trigger: GTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLLLVSS*QLESQK
Trigger: TTTCTGGCTCTCCAGCTGTCACGATGACACCAACAA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTTGTTGGTGTCATCGTaGCAGCTGGAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSLLVSS*QLESQK
Trigger: TTTCTGGCTCTCCAGCTGTCACGATGACACCAACAA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGGTATTAGTTGGCTTTaGCAATTCAAAATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRGISWL*QFKMQQ
Trigger: TTGCTGCATTTTGAATTGTCAAAGCCAACTAATACC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGATATCATTGTAAAAGGTaGGAAATTCCAACGCCTATG +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRYHCKR*EIPTPM
Trigger: CATAGGCGTTGGAATTTCTCACCTTTTACAATGATA...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTCACTGTTTAACTTTGTaGTATTCTCCTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVHCLTL*YSPEGH
Trigger: ATGACCTTCAGGAGAATATCACAAAGTTAAACAGTG...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTAGCGATTTTGAGGTGTaGATTGAAGTGTTTATGTGT +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFSDFEV*IEVFMC
Trigger: ACACATAAACACTTCAATGCACACCTCAAAATCGCT...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGAGCGATTTTGAGGTGTaGATTGAAGTGTTTATGTGT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKSDFEV*IEVFMC
Trigger: ACACATAAACACTTCAATGCACACCTCAAAATCGCT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCAAACAGCTCTCTCAGTaGCTCTTCCGTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSKQLSQ*LFRMVL
Trigger: CAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTT...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTCTAAACAGAAAATTCTaGATGGACCATAGGAGACAA +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFLNRKF*MDHRRQ
Trigger: TTGTCTCCTATGGTCCATGCAGAATTTTCTGTTTAG...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATGGCAGGAATAACACCTaGCCACTAAACAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNGRNNT*PLNRKF
Trigger: GAATTTTCTGTTTAGTGGGCAGGTGTTATTCCTGCC...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGATTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTGCACCCTCAGAGGGTaGAATGTAATCCCACCCATA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSCTLRG*NVIPPI
Trigger: TATGGGTGGGATTACATTGCACCCTCTGAGGGTGCA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATGTGACAAGCCACAGCTaGTTCCAAATAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNVTSHS*FQIRTF
Trigger: GAATGTTCTTATTTGGAAGCAGCTGTGGCTTGTCAC...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTGGTAGAAGGTTATGCTaGTTACTCCTCAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRGRRLC*LLLKFG
Trigger: TCCAAATTTGAGGAGTAAGCAGCATAACCTTCTACC...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCATGAGGAAGAGCAACTaGAGAGCCTCAATTTGCCGG +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSMRKSN*RASICR
Trigger: CCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCAT...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTGTTTCTTTGCTGTCTaGTATAGGAGATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPCFFAV*YRRSSN
Trigger: ATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTGTTTCTTTGCTGTCTaGTATAGGAGATCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKCFFAV*YRRSSN
Trigger: ATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTTTGGCCACAGGACATaGGGTGCAAACATAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLFGHRT*GANIRA
Trigger: TGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCGCCCTCTTTTGTACCTaGGAAGTAGAAGGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLALFCT*EVEGSR
Trigger: GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGC...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCCTTACTCCTCAAATTTaGATTCTAAGTCGATCACAG +
Preference number: 4 (lower is better)
Translates to: LITTGVKRLCILGTQIFPLTPQI*ILSRSQ
Trigger: CTGTGATCGACTTAGAATCCAAATTTGAGGAGTAAG...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTCACACCAGATTCATTaGTCCCAATGCAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRSHQIH*SQCKSL
Trigger: TAGACTTTTGCATTGGGACCAATGAATCTGGTGTGA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTCACACCAGATTCATTaGTCCCAATGCAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCSHQIH*SQCKSL
Trigger: TAGACTTTTGCATTGGGACCAATGAATCTGGTGTGA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGAAAATGACCTCAGAATaGGGGCCATTAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLKMTSE*GPLASS
Trigger: GCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTT...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTGCAGAAAGAACCCTaGGGTGAGGGAATATTTCCC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSLQKEP*GEGIFP
Trigger: GGGAAATATTCCCTCACCCCAGGGTTCTTTCTGCAG...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGATTGTTTCTTCTTTGCTaGCTCTGGCATATCATGAAC +
Preference number: 4 (lower is better)
Translates to: WVLVELITTGVKRLCILGLFLLC*LWHIMN
Trigger: GTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAA...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCGCAAACATCATCCAGTaGGTGGGGTTAGAGGTATCA +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLANIIQ*VGLEVS
Trigger: TGATACCTCTAACCCCACTCACTGGATGATGTTTGC...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTGGAGAGCCTCAATTTaGCGGTCCTTGTCTGGTATA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSWRASI*RSLSGI
Trigger: TATACCAGACAAGGACCGGCAAATTGAGGCTCTCCA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTTCAAAAGTGGAATCTaGCTAAACACATTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRFKSGI*LNTLSE
Trigger: CTCACTCAATGTGTTTAGGCAGATTCCACTTTTGAA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAATTTTTCTCCACTATTaGTGTTACAGCAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRIFLHY*CYSSKS
Trigger: GCTTTTGCTGCTGTAACAGCAATAGTGGAGAAAAAT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAATCTATTGTTCACACTaGATTAAGCTGGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: PPESSFISAMVQHIQQFRIYCSH*IKLEDQ
Trigger: TTGGTCTTCCAGCTTAATGCAGTGTGAACAATAGAT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCACTCTAGGATCGACTaGTTCCTTACAGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLHSRID*FLTGQQ
Trigger: CTGTTGACCTGTAAGGAAGCAGTCGATCCTAGAGTG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCACATCTTCAGCAAAGTaGCAACATCATTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCTSSAK*QHHLSE
Trigger: TTCACTCAAATGATGTTGCCACTTTGCTGAAGATGT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGTCTCGCCCTGGTGTCTaGGTCAATGATTGCTTATTA +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLSRPGV*VNDCLL
Trigger: TAATAAGCAATCATTGACCCAGACACCAGGGCGAGA...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAAATGGCCACAGATTCTaGAGTAGGGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPNGHRF*SRVLLF
Trigger: AAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCCACTTCAATCTTGTTaGTGTCATCGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSPLQSC*CHRDSW
Trigger: CCAGCTGTCACGATGACACCAACAAGATTGAAGTGG...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCATAAAGAGTCATCCTaGGACATAAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLHKESS*DIKAAS
Trigger: GCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGTTAAAGATAATGGGCTaGCCTCGAAGGGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLLKIMG*PRREES
Trigger: TGATTCTTCCCTTCGAGGTCAGCCCATTATCTTTAA...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGGACTTAGTATGACATaGAGCTATGAGGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSGLSMT*SYEVKV
Trigger: GACCTTGACCTCATAGCTTCATGTCATACTAAGTCC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGACTTCTTTTTCTTTTCTaGCATCATCTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WVLVELITTGVKRLCILGLLFLF*HHLISQ
Trigger: CTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAG...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGTCAGTGACTTTCCTTaGGTCACAGTGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSVSDFP*VTVIWF
Trigger: GAACCAAATCACTGTGACTCAAGGAAAGTCACTGAC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCAACAGTAACACTCCTTaGACATTGGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLNSNTP*TLVTSH
Trigger: GTGGCTTGTCACCAATGTTCAAGGAGTGTTACTGTT...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCAGTTCTACACAAAAATaGCCTCAGAATGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLSSTQK*PQNGGH
Trigger: ATGGCCCCCATTCTGAGGTCATTTTTGTGTAGAACT...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCAATTTTTCTCCACTATTaGTGTTACAGCAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPIFLHY*CYSSKS
Trigger: GCTTTTGCTGCTGTAACAGCAATAGTGGAGAAAAAT...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTACATCTTCAGCAAAGTaGCAACATCATTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFTSSAK*QHHLSE
Trigger: TTCACTCAAATGATGTTGCCACTTTGCTGAAGATGT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTTAAAGATAATGGGCTaGCCTCGAAGGGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSLKIMG*PRREES
Trigger: TGATTCTTCCCTTCGAGGTCAGCCCATTATCTTTAA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGTTGTTTCTTCTTTGCTaGCTCTGGCATATCATGAAC +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLLFLLC*LWHIMN
Trigger: GTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAA...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTA +
Preference number: 4 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFSFQQW*SIFNSL
Trigger: TAAACTGTTGAATATGCTGCACCATTGCTGAAATGA...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATTCATTTCAGCAATGGTaGAGCATATTCAACAGTTTA +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNSFQQW*SIFNSL
Trigger: TAAACTGTTGAATATGCTGCACCATTGCTGAAATGA...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCTTGATGCCTGAGTTCTaGATCCCAAATAGTGCAATC +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSLMPEF*IPNSAI
Trigger: GATTGCACTATTTGGGATCCAGAACTCAGGCATCAA...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCATAGGAGACAACTCTaGATCCTTCAGAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLHRRQL*ILQRNP
Trigger: AGGATTTCTCTGAAGGATCCAGAGTTGTCTCCTATG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp ACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTCTAAATTCAGAAGTATTACGTTaGCACCAGAGATGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: TTFAYDSIHPKSIYIRLNSEVLR*HQRCFS
Trigger: ACTAAAACATCTCTGGTGCCAACGTAATACTTCTGA...ATTTAGACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CCA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATAACTCTGTTAAATACTaGCTCAAAAACAATACCTGC +
Preference number: 4 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNNSVKY*LKNNTC
Trigger: GCAGGTATTGTTTTTGAGCCAGTATTTAACAGAGTT...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTTATTTTCACATCACTaGGGAAAGGGAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLLFSHH*GKGKRE
Trigger: CTCTCTCTTTCCCTTTCCTCAGTGATGTGAAAATAA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGAAGGGAAGAATCATTaGAGATCACAAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSEGKNH*RSQNCR
Trigger: TCTGCAGTTTTGTGATCTGCAATGATTCTTCCCTTC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCAATGGCCACAGATTCTaGAGTAGGGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLNGHRF*SRVLLF
Trigger: AAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATT...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CCA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGTCAGAAGTATTACGTTaGCACCAGAGATGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLSEVLR*HQRCFS
Trigger: ACTAAAACATCTCTGGTGCCAACGTAATACTTCTGA...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR TCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCACACAAATTAGGTATTaGGGAATACAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSTQIRY*GIQPHK
Trigger: CTTATGAGGCTGTATTCCTCAATACCTAATTTGTGT...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR TCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCACTGTTTAACTTTGTaGTATTCTCCTGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLHCLTL*YSPEGH
Trigger: ATGACCTTCAGGAGAATATCACAAAGTTAAACAGTG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTTTGACAATTCAAAATaGAGCAAGCAAGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLFDNSK*SKQAAS
Trigger: ACTTGCAGCTTGCTTGCTGCATTTTGAATTGTCAAA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR GCA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCATCTATTGTTCACACTaGATTAAGCTGGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSIYCSH*IKLEDQ
Trigger: TTGGTCTTCCAGCTTAATGCAGTGTGAACAATAGAT...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR GCA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCCTTTATCATCAAACTaGATCAAATCAGCGATTTTG +
Preference number: 4 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLPLSSN*IKSAIL
Trigger: CAAAATCGCTGATTTGATGCAGTTTGATGATAAAGG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS TCA 90 bp TCTCCTACCCTTTCGCTTGAGAGACATGAGAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCCAGGCAACTTAAGGTCCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: SPTLSLERHERPEES*CWASPARQLKVHFP
Trigger: GGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGGTAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493068.2
CDS-3UTR CAA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGGTCAAGGTCATCCTTaGATGCCTGAGTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPGQGHP*MPEFWI
Trigger: GATCCAGAACTCAGGCATCAAAGGATGACCTTGACC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCCCAAGGGTGTTCCCTaGTCCTTCCTGAATGACTCT +
Preference number: 5 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSPKGVP*SFLNDS
Trigger: AGAGTCATTCAGGAAGGACAAGGGAACACCCTTGGG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATCTGGAGAGCCTCAATTaGCCGGTCCTTGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHLESLN*PVLVWY
Trigger: ATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAG...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS TCA 90 bp GGGCCAGCCCCGCCAGGCAACTTAAGGTCCACTTCCCCCATCAGCTaGGCCAACTCAGTTCCAGGTAAATCGATGAGCCTTGTGATATTG +
Preference number: 5 (lower is better)
Translates to: GPAPPGNLRSTSPIS*ANSVPGKSMSLVIL
Trigger: CAATATCACAAGGCTCATCGATTTACCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
ENST00000493068.2
CDS TCA 90 bp TCCTTTTTCCTTTCGCTTGAGAGACATGAGAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCCAGGCAACTTAAGGTCCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: SFFLSLERHERPEES*CWASPARQLKVHFP
Trigger: GGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGAAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 5 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCTGGAGAGCCTCAATTaGCCGGTCCTTGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHLESLN*PVLVWY
Trigger: ATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGCTGACATCTTGTTCTaGTCTTGTTTCTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPADILF*SCFFAV
Trigger: GACAGCAAAGAAACAAGACAAGAACAAGATGTCAGC...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCCATATCATGAACGTGTaGAAACAGCTCTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSHIMNV*KQLSQC
Trigger: GCACTGAGAGAGCTGTTTCAACACGTTCATGATATG...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRRTSPL*YLGSRR
Trigger: CCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATACCTTGTTTCTCTTGTaGAGCAAGCTCAGGGATAGG +
Preference number: 5 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHTLFLL*SKLRDR
Trigger: CCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGGT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCGGTCAAGGTCATCCTTaGATGCCTGAGTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTGQGHP*MPEFWI
Trigger: GATCCAGAACTCAGGCATCAAAGGATGACCTTGACC...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AGGGGGCTGCCAGCTGGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTGCTTACTCCTCAAATTaGGATTCTAAGTCGATCACA +
Preference number: 5 (lower is better)
Translates to: RGLPAGHKAKLCSPRVIFAYSSN*DSKSIT
Trigger: TGTGATCGACTTAGAATCCAAATTTGAGGAGTAAGC...AAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCCAGCTGGCAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTTTACCTGCTCCTGTTTaGGCCCTCAGGTACAGTCAG +
Preference number: 5 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGLPAPV*ALRYSQ
Trigger: CTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACCTAAAAATCACCTGGTaGCATGGCCAGTCACTGTGG +
Preference number: 5 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHLKITW*HGQSLW
Trigger: CCACAGTGACTGGCCATGCAACCAGGTGATTTTTAG...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGGCACAAGGCCAAGCTCTGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGGACAAAGGCAACCCTaGCTCTGCAGAAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: GHKAKLCSPRVIFHFSNGGQRQP*LCRKNP
Trigger: AGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTCC...ACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCAGAGCTTGGCCTTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCATGAGCCTTGTGATATaGCTGACCACCAACTCAGTG +
Preference number: 5 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTMSLVI*LTTNSV
Trigger: CACTGAGTTGGTGGTCAGCAATATCACAAGGCTCAT...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GCCAGGGGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCATCTACTCGCAAGTTTTaGTGTAGATACTCAATCAGT +
Preference number: 5 (lower is better)
Translates to: ARGGLHGSLAQAVASHTPSTRKF*CRYSIS
Trigger: ACTGATTGAGTATCTACACAAAAACTTGCGAGTAGA...TGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGAGGGCTCCATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATTTTGAGGTGTGCATaGAAGTGTTTATGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GGLHGSLAQAVASHTPVSILRCA*KCLCVS
Trigger: GCTGACACATAAACACTTCAATGCACACCTCAAAAT...GGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATGGAGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CGAGCCCTCTTTTGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCCATATCATGAACGTGTaGAAACAGCTCTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: RALFCTWEVEGSRPGVWVHIMNV*KQLSQC
Trigger: GCACTGAGAGAGCTGTTTCAACACGTTCATGATATG...GACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR CAA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGCTAAAAATCACCTGGTaGCATGGCCAGTCACTGTGG +
Preference number: 5 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVLKITW*HGQSLW
Trigger: CCACAGTGACTGGCCATGCAACCAGGTGATTTTTAG...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCCTCCTAGGCACACTCCAGAGAAGTGGCAACATCATTaGAGTGAAATTCCCCTGATT +
Preference number: 5 (lower is better)
Translates to: RVILGHKGSQPPPRHTPEKWQHH*SEIPLI
Trigger: AATCAGGGGAATTTCACTCAAATGATGTTGCCACTT...CTCTGGAGTGTGCCTAGGAGGGGGCTGGCTGCCTTTATGTCCCAGGATGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp ATACCTCCGGAGCACCCAGGTGTCACTGCAGTCAACAGCCCTCCACTAGCCCATATTTTGAGGTGTGCATaGAAGTGTTTATGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: IPPEHPGVTAVNSPPLAHILRCA*KCLCVS
Trigger: GCTGACACATAAACACTTCAATGCACACCTCAAAAT...ATGGGCTAGTGGAGGGCTGTTGACTGCAGTGACACCTGGGTGCTCCGGAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GSTASLQVNRTDTSGAPRSICRS*SGILVL
Trigger: CAAGACCAATATACCAGACAAGGACCGGCAAATTGA...CCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 5 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGCTCAGAAGGCACAGCTaGCAAACATCATCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVLRRHS*QTSSSE
Trigger: CTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGAG...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTTCAGCCCTGCAGAGGTaGCTGCTTGCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCSALQR*LLASSF
Trigger: GAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTGA...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCTGGAGAGCCTCAATTaGCCGGTCCTTGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: YTKMTSEWGPLASSICVRLESLN*PVLVWY
Trigger: ATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAACTGCAAGTCCAAGCTTaGCTGTGGGCAGGAATAACA +
Preference number: 5 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQLQVQA*LWAGIT
Trigger: TGTTATTCCTGCCCACAGCAAAGCTTGGACTTGCAG...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTGCAGAGGTTGCTGCTaGCTTCTTCTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGCRGCC*LLLSDP
Trigger: AGGATCAGAAAGAAGAAGCAAGCAGCAACCTCTGCA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AATACCTGCCCACCAAATCAGAAGGGAGACAGCAGCCTTCTGTGGCAAATGATATCAGCCCTGCAGAGGTaGCTGCTTGCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: NTCPPNQKGDSSLLWQMISALQR*LLASSF
Trigger: GAAAGAAGAAGCAAGCAGCAACCTCTGCAGGGCTGA...TATCATTTGCCACAGAAGGCTGCTGTCTCCCTTCTGATTTGGTGGGCAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGGGACAAAGGCAACCCTaGCTCTGCAGAAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: YTKMTSEWGPLASSICVRGQRQP*LCRKNP
Trigger: AGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTCC...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTATGAGCCTTGTGATATaGCTGACCACCAACTCAGTG +
Preference number: 5 (lower is better)
Translates to: AVRETEQKRSYSGGENGSMSLVI*LTTNSV
Trigger: CACTGAGTTGGTGGTCAGCAATATCACAAGGCTCAT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CGAGCCCTCTTTTGTACCTGGGAAGTAGAAGGTTCTCGCCCTGGTGTCTGGGTCATGTCAGTTCCATTATaGAGAGCATCCCTTAAAATC +
Preference number: 5 (lower is better)
Translates to: RALFCTWEVEGSRPGVWVMSVPL*RASLKI
Trigger: GATTTTAAGGGATGCTCTCAATAATGGAACTGACAT...GACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGGCTCTTTAGCACAGGCTGTGGCCTCACACACTCCAGTCTCCATGGTAACCAAGTGGCAACATCATTaGAGTGAAATTCCCCTGATT +
Preference number: 5 (lower is better)
Translates to: HGSLAQAVASHTPVSMVTKWQHH*SEIPLI
Trigger: AATCAGGGGAATTTCACTCAAATGATGTTGCCACTT...GGTTACCATGGAGACTGGAGTGTGTGAGGCCACAGCCTGTGCTAAAGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACATCAAATCAGCGATTTaGAGGTGTGCATTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHIKSAI*RCALKC
Trigger: ACACTTCAATGCACACCTCAAAATCGCTGATTTGAT...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QCNPTHKESSWDIKAASPSICRS*SGILVL
Trigger: CAAGACCAATATACCAGACAAGGACCGGCAAATTGA...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAAGCAGGAGCATTTTTaGGCCACAGGACATGGGGTG +
Preference number: 5 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSKQEHF*ATGHGV
Trigger: CACCCCATGTCCTGTGGCCAAAAAATGCTCCTGCTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358308.7
CDS-3UTR CAA 90 bp CAATGTAATCCCACCCATAAAGAGTCATCCTGGGACATAAAGGCAGCCAGCCCCACTGGTGTAAAACGCTaGTGCATCTTAGGAACCCAA +
Preference number: 5 (lower is better)
Translates to: QCNPTHKESSWDIKAASPTGVKR*CILGTQ
Trigger: TTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGT...GGGGCTGGCTGCCTTTATGTCCCAGGATGACTCTTTATGGGTGGGATTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGACTGGTGTAAAACGCTaGTGCATCTTAGGAACCCAA +
Preference number: 5 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVTGVKR*CILGTQ
Trigger: TTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACTCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHSLSGI*VLFPLS
Trigger: TGATAAAGGAAACAAGACCAATATACCAGACAAGGA...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTGCTGACATCTTGTTCTaGTCTTGTTTCTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGADILF*SCFFAV
Trigger: GACAGCAAAGAAACAAGACAAGAACAAGATGTCAGC...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKRTSPL*YLGSRR
Trigger: CCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp AAAAATCACCTGGTTGCATGGCCAGTCACTGTGGGGCACGTTCCCAGTGACCACGAATACCATTTCAATTaGGTGATACCCAAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: KNHLVAWPVTVGHVPSDHEYHFN*VIPKGF
Trigger: AAACCCTTTGGGTATCACCAAATTGAAATGGTATTC...GTGGTCACTGGGAACGTGCCCCACAGTGACTGGCCATGCAACCAGGTGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTTACCTGCTCCTGTTTaGGCCCTCAGGTACAGTCAG +
Preference number: 5 (lower is better)
Translates to: LITTGVKRLCILGTQIFPLPAPV*ALRYSQ
Trigger: CTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTGTAAAGAGCTTTCCTTaGCGGAGGATCAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: AVRETEQKRSYSGGENGSVKSFP*RRINCS
Trigger: ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTAC...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TCTGGGCAGACACCAGTTCATACTAGGTCAAAGCCATGCCACTGCTCTATCCAAACTGGTGTAAAACGCTaGTGCATCTTAGGAACCCAA +
Preference number: 5 (lower is better)
Translates to: SGQTPVHTRSKPCHCSIQTGVKR*CILGTQ
Trigger: TTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGT...TTGGATAGAGCAGTGGCATGGCTTTGACCTAGTATGAACTGGTGTCTGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCGGACAAAGGCAACCCTaGCTCTGCAGAAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: LITTGVKRLCILGTQIFPGQRQP*LCRKNP
Trigger: AGGGTTCTTTCTGCAGAGCAAGGGTTGCCTTTGTCC...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTAAACGAGACCATTTTTaGGCCACAGGACATGGGGTG +
Preference number: 5 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSKRDHF*ATGHGV
Trigger: CACCCCATGTCCTGTGGCCAAAAAATGGTCTCGTTT...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492211.5
CDS CCA 90 bp TTCAGCAAATTACGATTAGGAGGAGGGAGAATGAGGAAGAGCAACTaGAGAGCCTCAATTTGCCGGTCCTTGTCTGGTATATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FSKLRLGGGRMRKSN*RASICRSLSGILVL
Trigger: CAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATTCTCCCTCCTCCTAATCGTAATTTGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS-3UTR CAA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTCCTTTTTCCTTTCGCTaGAGAGACATGAGAGACCGG +
Preference number: 5 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVPFSFR*RDMRDR
Trigger: CCGGTCTCTCATGTCTCTCAAGCGAAAGGAAAAAGG...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp ATCGACTGCTTCCTTACAGGTCAACAGAACAGATACCTCCGGAGCACCCAGGTGATGTCAGTTCCATTATaGAGAGCATCCCTTAAAATC +
Preference number: 5 (lower is better)
Translates to: IDCFLTGQQNRYLRSTQVMSVPL*RASLKI
Trigger: GATTTTAAGGGATGCTCTCAATAATGGAACTGACAT...CACCTGGGTGCTCCGGAGGTATCTGTTCTGTTGACCTGTAAGGAAGCAGTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCCTGGAGAGCCTCAATTaGCCGGTCCTTGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCLESLN*PVLVWY
Trigger: ATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAG...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp GGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTCACTACTACAGCAGGGTTCTTGTCTTGTTTCTTaGCTGTCTGGTATAGGAGAT +
Preference number: 5 (lower is better)
Translates to: GPQVQSVSPDALSLLQQGSCLVS*LSGIGD
Trigger: ATCTCCTATACCAGACAGCAAAGAAACAAGACAAGA...ACCCTGCTGTAGTAGTGAAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGGGTCAAGGTCATCCTTaGATGCCTGAGTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKGQGHP*MPEFWI
Trigger: GATCCAGAACTCAGGCATCAAAGGATGACCTTGACC...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACTCAGAAGGCACAGCTaGCAAACATCATCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRLRRHS*QTSSSE
Trigger: CTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGAG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TACACAAAAATGACCTCAGAATGGGGGCCATTAGCCTCAAGCATCTGTGTGAGGCCCAGAACACAACCTTaGCTTATGATTCCATTCACC +
Preference number: 5 (lower is better)
Translates to: YTKMTSEWGPLASSICVRPRTQP*LMIPFT
Trigger: GGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGG...CCTCACACAGATGCTTGAGGCTAATGGCCCCCATTCTGAGGTCATTTTTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCCCCAAGGGTGTTCCCTaGTCCTTCCTGAATGACTCT +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCPKGVP*SFLNDS
Trigger: AGAGTCATTCAGGAAGGACAAGGGAACACCCTTGGG...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGCTAAAAATCACCTGGTaGCATGGCCAGTCACTGTGG +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKLKITW*HGQSLW
Trigger: CCACAGTGACTGGCCATGCAACCAGGTGATTTTTAG...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS GCA 90 bp TTAGGAGGAGGGAGAATGAGGAAGAGCAACTGGAGAGCCTCAATTTaGCGGTCCTTGTCTGGTATATTGGTCTTGTTTCCTTTATCATCA +
Preference number: 5 (lower is better)
Translates to: LGGGRMRKSNWRASI*RSLSGILVLFPLSS
Trigger: TGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATTCTCCCTCCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CCA 90 bp ATACTCAATCAGTTGGTATATCTGGGCAATGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCCTTTTTCCTTTCGCTTGAGAGACAT +
Preference number: 5 (lower is better)
Translates to: ILNQLVYLGNAFLRQ*GPKYHSFFLSLERH
Trigger: ATGTCTCTCAAGCGAAAGGAAAAAGGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATACCAACTGATTGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS CCA 90 bp TCTACTCGCAAGTTTTTGTGTAGATACTCAATCAGTTGGTATATCTaGGCAATGCCTTCCTCCGTCAGTGGGGACCCAAATATCACTCCT +
Preference number: 5 (lower is better)
Translates to: STRKFLCRYSISWYI*AMPSSVSGDPNITP
Trigger: AGGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATACCAACTGATTGAGTATCTACACAAAAACTTGCGAGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGATGAGCCTTGTGATATaGCTGACCACCAACTCAGTG +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKMSLVI*LTTNSV
Trigger: CACTGAGTTGGTGGTCAGCAATATCACAAGGCTCAT...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGTCTACTCGCAAGTTTTaGTGTAGATACTCAATCAGT +
Preference number: 5 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVSTRKF*CRYSIS
Trigger: ACTGATTGAGTATCTACACAAAAACTTGCGAGTAGA...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp AGACAGGGCCTAAGCACTCTCTCAGAAGGCACAGCTTGCAAACATCATCCAGTGATGTCAGTTCCATTATaGAGAGCATCCCTTAAAATC +
Preference number: 5 (lower is better)
Translates to: RQGLSTLSEGTACKHHPVMSVPL*RASLKI
Trigger: GATTTTAAGGGATGCTCTCAATAATGGAACTGACAT...CACTGGATGATGTTTGCAAGCTGTGCCTTCTGAGAGAGTGCTTAGGCCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp GCTGTGAGGGAAACTGAACAGAAACGTTCCTACTCAGGAGGAGAGAATGGCTCTATCAAATCAGCGATTTaGAGGTGTGCATTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: AVRETEQKRSYSGGENGSIKSAI*RCALKC
Trigger: ACACTTCAATGCACACCTCAAAATCGCTGATTTGAT...AGAGCCATTCTCTCCTCCTGAGTAGGAACGTTTCTGTTCAGTTTCCCTCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CACCAAATCCAAAAGCCAGAAGCTCTGGCCCCATCTCCAAATTACCACCTGTGTATCAAATCAGCGATTTaGAGGTGTGCATTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: HQIQKPEALAPSPNYHLCIKSAI*RCALKC
Trigger: ACACTTCAATGCACACCTCAAAATCGCTGATTTGAT...ACACAGGTGGTAATTTGGAGATGGGGCCAGAGCTTCTGGCTTTTGGATTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTCTTGTCTTGTTTCTTaGCTGTCTGGTATAGGAGAT +
Preference number: 5 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAASCLVS*LSGIGD
Trigger: ATCTCCTATACCAGACAGCAAAGAAACAAGACAAGA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAATGAGCCTTGTGATATaGCTGACCACCAACTCAGTG +
Preference number: 5 (lower is better)
Translates to: PPESSFISAMVQHIQQFRMSLVI*LTTNSV
Trigger: CACTGAGTTGGTGGTCAGCAATATCACAAGGCTCAT...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TTACCTGCTCCTGTTTTGGCCCTCAGGTACAGTCAGTATCTCCTGATGCTCTTTAAGTGGCAACATCATTaGAGTGAAATTCCCCTGATT +
Preference number: 5 (lower is better)
Translates to: LPAPVLALRYSQYLLMLFKWQHH*SEIPLI
Trigger: AATCAGGGGAATTTCACTCAAATGATGTTGCCACTT...AAAGAGCATCAGGAGATACTGACTGTACCTGAGGGCCAAAACAGGAGCAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LITTGVKRLCILGTQIFPSICRS*SGILVL
Trigger: CAAGACCAATATACCAGACAAGGACCGGCAAATTGA...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAGGTCAAGGTCATCCTTaGATGCCTGAGTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: WVLVELITTGVKRLCILGGQGHP*MPEFWI
Trigger: GATCCAGAACTCAGGCATCAAAGGATGACCTTGACC...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTCATATCATGAACGTGTaGAAACAGCTCTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVHIMNV*KQLSQC
Trigger: GCACTGAGAGAGCTGTTTCAACACGTTCATGATATG...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCACTCAGAAGGCACAGCTaGCAAACATCATCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPLRRHS*QTSSSE
Trigger: CTCACTGGATGATGTTTGCAAGCTGTGCCTTCTGAG...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CCACAGGTTCTCCTAGACGGCAGTATTTTCAACTGCATGCTAACACAGGCTGCTTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 5 (lower is better)
Translates to: PQVLLDGSIFNCMLTQAALSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...AGCAGCCTGTGTTAGCATGCAGTTGAAAATACTGCCGTCTAGGAGAACCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGACCCAGAACACAACCTTaGCTTATGATTCCATTCACC +
Preference number: 5 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRPRTQP*LMIPFT
Trigger: GGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGG...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGAACCCAAATCTTCCCCGAAACCTTGTTTCTCTaGTTGAGCAAGCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LITTGVKRLCILGTQIFPETLFL*LSKLRD
Trigger: ATCCCTGAGCTTGCTCAACAAGAGAAACAAGGTTTC...GGGGAAGATTTGGGTTCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGGAAACCTTGTTTCTCTaGTTGAGCAAGCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKETLFL*LSKLRD
Trigger: ATCCCTGAGCTTGCTCAACAAGAGAAACAAGGTTTC...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGAAACCTTGTTTCTCTaGTTGAGCAAGCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: HDPHPRTQPLLMIPFTQRETLFL*LSKLRD
Trigger: ATCCCTGAGCTTGCTCAACAAGAGAAACAAGGTTTC...TCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCSICRS*SGILVL
Trigger: CAAGACCAATATACCAGACAAGGACCGGCAAATTGA...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp TCTGGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTCTTGTCTTGTTTCTTaGCTGTCTGGTATAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SGRTFWVKSFPLRRINCSSCLVS*LSGIGD
Trigger: ATCTCCTATACCAGACAGCAAAGAAACAAGACAAGA...ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp TGGGTTTTAGTTGAGTTAATCACCACTGGTGTAAAACGCTTGTGCATCTTAGGATGCAGAGGTTGCTGCTaGCTTCTTCTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: WVLVELITTGVKRLCILGCRGCC*LLLSDP
Trigger: AGGATCAGAAAGAAGAAGCAAGCAGCAACCTCTGCA...TCCTAAGATGCACAAGCGTTTTACACCAGTGGTGATTAACTCAACTAAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAGTAAAGAGCTTTCCTTaGCGGAGGATCAACTGTAGT +
Preference number: 5 (lower is better)
Translates to: PPESSFISAMVQHIQQFRVKSFP*RRINCS
Trigger: ACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTAC...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGCCCAAGGGTGTTCCCTaGTCCTTCCTGAATGACTCT +
Preference number: 5 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLPKGVP*SFLNDS
Trigger: AGAGTCATTCAGGAAGGACAAGGGAACACCCTTGGG...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTACCTTGTTTCTCTTGTaGAGCAAGCTCAGGGATAGG +
Preference number: 5 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFTLFLL*SKLRDR
Trigger: CCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGGT...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS GCA 90 bp TCCAAGTCAATGTCAGTTCCATTATTGAGAGCATCCCTTAAAATCTaGTGTCGGACACTATTACCCGGTACTCTAAACAAACCCTCTACT +
Preference number: 5 (lower is better)
Translates to: SKSMSVPLLRASLKI*CRTLLPGTLNKPST
Trigger: AGTAGAGGGTTTGTTTAGAGTACCGGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACATTGACTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CCA 90 bp AGAGCAACTGGAGAGCCTCAATTTGCCGGTCCTTGTCTGGTATATTaGTCTTGTTTCCTTTATCATCAAACTGCATCAAATCAGCGATTT +
Preference number: 5 (lower is better)
Translates to: RATGEPQFAGPCLVY*SCFLYHQTASNQRF
Trigger: AAATCGCTGATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CCA 90 bp AATGAGGAAGAGCAACTGGAGAGCCTCAATTTGCCGGTCCTTGTCTaGTATATTGGTCTTGTTTCCTTTATCATCAAACTGCATCAAATC +
Preference number: 5 (lower is better)
Translates to: NEEEQLESLNLPVLV*YIGLVSFIIKLHQI
Trigger: GATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS-3UTR CAA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCGAACGAGCCCTCTTTaGTACCTGGGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSRTSPL*YLGSRR
Trigger: CCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTGCTTACTCCTCAAATTaGGATTCTAAGTCGATCACA +
Preference number: 5 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVAYSSN*DSKSIT
Trigger: TGTGATCGACTTAGAATCCAAATTTGAGGAGTAAGC...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGAAGGACATTCTGGGTAAAGAGCTTTCCTTTGCGGAGGATCAACTGTAGTTTTTCTACTCGCAAGTTTTaGTGTAGATACTCAATCAGT +
Preference number: 5 (lower is better)
Translates to: GRTFWVKSFPLRRINCSFSTRKF*CRYSIS
Trigger: ACTGATTGAGTATCTACACAAAAACTTGCGAGTAGA...AAAACTACAGTTGATCCTCCGCAAAGGAAAGCTCTTTACCCAGAATGTCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAAGTGGCAACATCATTaGAGTGAAATTCCCCTGATT +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCKWQHH*SEIPLI
Trigger: AATCAGGGGAATTTCACTCAAATGATGTTGCCACTT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCATCAAATCAGCGATTTaGAGGTGTGCATTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCIKSAI*RCALKC
Trigger: ACACTTCAATGCACACCTCAAAATCGCTGATTTGAT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp TGCTCCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: CSPRVIFHFSNGAAYSTVSLSGI*VLFPLS
Trigger: TGATAAAGGAAACAAGACCAATATACCAGACAAGGA...AACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCAGCAAGTCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: GISRVTVLVGFDNSKCSKSLSGI*VLFPLS
Trigger: TGATAAAGGAAACAAGACCAATATACCAGACAAGGA...CTTGCTGCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CTTCTAAGCAGTTTTGTTTTCCTAACCATCTATTGTTCACACTGCATTAAGCTGACCTTGTTTCTCTTGTaGAGCAAGCTCAGGGATAGG +
Preference number: 5 (lower is better)
Translates to: LLSSFVFLTIYCSHCIKLTLFLL*SKLRDR
Trigger: CCTATCCCTGAGCTTGCTCAACAAGAGAAACAAGGT...CAGCTTAATGCAGTGTGAACAATAGATGGTTAGGAAAACAAAACTGCTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTCTACTCGCAAGTTTTaGTGTAGATACTCAATCAGT +
Preference number: 5 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRSTRKF*CRYSIS
Trigger: ACTGATTGAGTATCTACACAAAAACTTGCGAGTAGA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTTAGAGGTATCAGTCGGGTCACGGTATTAGTTGGCTTTGACAATTCAAAATGCATGTCAGTTCCATTATaGAGAGCATCCCTTAAAATC +
Preference number: 5 (lower is better)
Translates to: VRGISRVTVLVGFDNSKCMSVPL*RASLKI
Trigger: GATTTTAAGGGATGCTCTCAATAATGGAACTGACAT...GCATTTTGAATTGTCAAAGCCAACTAATACCGTGACCCGACTGATACCTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CATTCACCCAAAGAGCATCTACATCCGTCTAAATCTCAGCTACTTCCCTTAAATATTTTGAGGTGTGCATaGAAGTGTTTATGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: HSPKEHLHPSKSQLLPLNILRCA*KCLCVS
Trigger: GCTGACACATAAACACTTCAATGCACACCTCAAAAT...ATTTAAGGGAAGTAGCTGAGATTTAGACGGATGTAGATGCTCTTTGGGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAACACAACCTTTGCTTATGATTCCATTCACCCAAAGAGCATCTACATCCGTTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 5 (lower is better)
Translates to: QNTTFAYDSIHPKSIYIRLSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...ACGGATGTAGATGCTCTTTGGGTGAATGGAATCATAAGCAAAGGTTGTGTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CCCCCAGAGTCATCTTTCATTTCAGCAATGGTGCAGCATATTCAACAGTTTAGAGAATACCATTTCAATTaGGTGATACCCAAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: PPESSFISAMVQHIQQFREYHFN*VIPKGF
Trigger: AAACCCTTTGGGTATCACCAAATTGAAATGGTATTC...TCTAAACTGTTGAATATGCTGCACCATTGCTGAAATGAAAGATGACTCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS TCA 90 bp AACTCTCCTAGAAACATCTTCAGCAAAGTGGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAGTCAATGTCAGTTCCATTATTGAGA +
Preference number: 5 (lower is better)
Translates to: NSPRNIFSKVATSFE*NSPDSKSMSVPLLR
Trigger: TCTCAATAATGGAACTGACATTGACTTGGAATCAGGGGAATTTCACTCAAATGATGTTGCCACTTTGCTGAAGATGTTTCTAGGAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS-3UTR CAA 90 bp AAATATCTCTCTCATGATCCTCACCCCAGAACACAACCTTTGCTTATGATTCCATCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCA +
Preference number: 5 (lower is better)
Translates to: KYLSHDPHPRTQPLLMIPSLSGI*VLFPLS
Trigger: TGATAAAGGAAACAAGACCAATATACCAGACAAGGA...TGGAATCATAAGCAAAGGTTGTGTTCTGGGGTGAGGATCATGAGAGAGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCATATCATGAACGTGTaGAAACAGCTCTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLHIMNV*KQLSQC
Trigger: GCACTGAGAGAGCTGTTTCAACACGTTCATGATATG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CAATCCCACAAAATGCTAGTATCTAGGTTTAGATCTAGGTCCTGTCTTCCGTTTGAATACCATTTCAATTaGGTGATACCCAAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: QSHKMLVSRFRSRSCLPFEYHFN*VIPKGF
Trigger: AAACCCTTTGGGTATCACCAAATTGAAATGGTATTC...AAACGGAAGACAGGACCTAGATCTAAACCTAGATACTAGCATTTTGTGGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCCCCAGAACACAACCTTaGCTTATGATTCCATTCACC +
Preference number: 5 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLPRTQP*LMIPFT
Trigger: GGTGAATGGAATCATAAGCAAAGGTTGTGTTCTGGG...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS-3UTR CAA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGTTTCTGATGAGGCATaGGTAAATCGAAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSVSDEA*VNRRDR
Trigger: CCTGTCTCTTCGATTTACCAATGCCTCATCAGAAAC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371027.5
CDS-3UTR CAA 90 bp GTCCAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCGCTGACATCTTGTTCTaGTCTTGTTTCTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VQKSYKFFGHKLGIEEYSADILF*SCFFAV
Trigger: GACAGCAAAGAAACAAGACAAGAACAAGATGTCAGC...GCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCATTTTGAGGTGTGCATaGAAGTGTTTATGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLILRCA*KCLCVS
Trigger: GCTGACACATAAACACTTCAATGCACACCTCAAAAT...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTCTTGTCTTGTTTCTTaGCTGTCTGGTATAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLSCLVS*LSGIGD
Trigger: ATCTCCTATACCAGACAGCAAAGAAACAAGACAAGA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS-3UTR CAA 90 bp CAGAAAAGCTATAAATTCTTTGGACACAAATTAGGTATTGAGGAATACAGCCTCTTGAGTCACAGTGATTaGGTTCAGAAGTATTACGTT +
Preference number: 5 (lower is better)
Translates to: QKSYKFFGHKLGIEEYSLLSHSD*VQKYYV
Trigger: AACGTAATACTTCTGAACCAAATCACTGTGACTCAA...GAGGCTGTATTCCTCAATACCTAATTTGTGTCCAAAGAATTTATAGCTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000492211.5
CDS CCA 72 bp ACTGCAGATGGCATCACTCCGGCCGGATTCGCGGGCTaGCACCTCCCCTTCACTCTGTGCCTCAGTCGCCAT +
Preference number: 6 (lower is better)
Translates to: TADGITPAGFAG*HLPFTLCLSRH
Trigger: ATGGCGACTGAGGCACAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGCCGGAGTGATGCCATCTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000466484.1
ENST00000493068.2
CDS CAA 90 bp CTGAGGCCTGCCCACCCTTCACAAACACATCTCCTACCCTTTCGCTaGAGAGACATGAGAGACCGGAAGAATCCTGATGCTGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: LRPAHPSQTHLLPFR*RDMRDRKNPDAGPA
Trigger: GGCTGGCCCAGCATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGGTAGGAGATGTGTTTGTGAAGGGTGGGCAGGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493068.2
CDS TCA 72 bp CTTTCGCTTGAGAGACATGAGAGACCGGAAGAATCCTaGTGCTGGGCCAGCCCCGCCAGGCAACTTAAGGTC +
Preference number: 6 (lower is better)
Translates to: LSLERHERPEES*CWASPARQLKV
Trigger: GACCTTAAGTTGCCTGGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
ENST00000493068.2
CDS TCA 72 bp CCGCCAGGCAACTTAAGGTCCACTTCCCCCATCAGCTaGGCCAACTCAGTTCCAGGTAAATCGATGAGCCTT +
Preference number: 6 (lower is better)
Translates to: PPGNLRSTSPIS*ANSVPGKSMSL
Trigger: AAGGCTCATCGATTTACCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGTGGACCTTAAGTTGCCTGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
ENST00000493068.2
CDS CAA 72 bp GCCCACCCTTCACAAACACATCTCCTACCCTTTCGCTaGAGAGACATGAGAGACCGGAAGAATCCTGATGCT +
Preference number: 6 (lower is better)
Translates to: AHPSQTHLLPFR*RDMRDRKNPDA
Trigger: AGCATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGGTAGGAGATGTGTTTGTGAAGGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493068.2
CDS CCA 72 bp CAGTTGGTATATCTGGGCAATGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCCTTTTTCTCGAAGGGA +
Preference number: 6 (lower is better)
Translates to: QLVYLGNAFLRQ*GPKYHSFFSKG
Trigger: TCCCTTCGAGAAAAAGGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATACCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466484.1
CDS CCA 72 bp CAGTTGGTATATCTGGGCAATGCCTTCCTCCGTCAGTaGGGACCCAAATATCACTCCTTTTTCCTTTCGCTT +
Preference number: 6 (lower is better)
Translates to: QLVYLGNAFLRQ*GPKYHSFFLSL
Trigger: AAGCGAAAGGAAAAAGGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATACCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
CDS GCA 72 bp TGTGTAGATACTCAATCAGTTGGTATATCTGGGCAATaGCTTCCTCCGTCAGTGGGGACCCAAATATCACTC +
Preference number: 6 (lower is better)
Translates to: CVDTQSVGISGQ*LPPSVGTQISL
Trigger: GAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATACCAACTGATTGAGTATCTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 90 bp GGGAGAATGAGGAAGAGCAACTGGAGAGCCTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTGTTTCCTTTATCATCAAACTGCATC +
Preference number: 6 (lower is better)
Translates to: GRMRKSNWRASICRS*SGILVLFPLSSNCI
Trigger: GATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 90 bp ATTAGGAGGAGGGAGAATGAGGAAGAGCAACTGGAGAGCCTCAATTaGCCGGTCCTTGTCTGGTATATTGGTCTTGTTTCCTTTATCATC +
Preference number: 6 (lower is better)
Translates to: IRRRENEEEQLESLN*PVLVWYIGLVSFII
Trigger: GATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATTCTCCCTCCTCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS GCA 72 bp ATCATCAAACTGCATCAAATCAGCGATTTTGAGGTGTaGATTGAAGTGTTTATGTGTCAGCAGAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: IIKLHQISDFEV*IEVFMCQQRLR
Trigger: CCGGAGCCTCTGCTGACACATAAACACTTCAATGCACACCTCAAAATCGCTGATTTGATGCAGTTTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CCA 72 bp GAGCAACTGGAGAGCCTCAATTTGCCGGTCCTTGTCTaGTATATTGGTCTTGTTTCCTTTATCATCAAACTG +
Preference number: 6 (lower is better)
Translates to: EQLESLNLPVLV*YIGLVSFIIKL
Trigger: CAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 72 bp AGGAAGAGCAACTGGAGAGCCTCAATTTGCCGGTCCTaGTCTGGTATATTGGTCTTGTTTCCTTTATCATCA +
Preference number: 6 (lower is better)
Translates to: RKSNWRASICRS*SGILVLFPLSS
Trigger: TGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 72 bp AACTCAGTTCCAGGTAAATCGATGAGCCTTGTGATATaGCTGACCACCAACTCAGTGAAAATCTCAGGTTTC +
Preference number: 6 (lower is better)
Translates to: NSVPGKSMSLVI*LTTNSVKISGF
Trigger: GAAACCTGAGATTTTCACTGAGTTGGTGGTCAGCAATATCACAAGGCTCATCGATTTACCTGGAACTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000492211.5
ENST00000493068.2
CDS CAA 90 bp AACTGGAGAGCCTCAATTTGCCGGTCCTTGTCTGGTATATTGGTCTaGTTTCCTTTATCATCAAACTGCATCAAATCAGCGATTTTGAGG +
Preference number: 6 (lower is better)
Translates to: NWRASICRSLSGILV*FPLSSNCIKSAILR
Trigger: CCTCAAAATCGCTGATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 90 bp AAGAGCAACTGGAGAGCCTCAATTTGCCGGTCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCATCAAACTGCATCAAATCAGCGATT +
Preference number: 6 (lower is better)
Translates to: KSNWRASICRSLSGI*VLFPLSSNCIKSAI
Trigger: AATCGCTGATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 72 bp AATTCCCCTGATTCCAAGTCAATGTCAGTTCCATTATaGAGAGCATCCCTTAAAATCTGCTGTCGGACACTA +
Preference number: 6 (lower is better)
Translates to: NSPDSKSMSVPL*RASLKICCRTL
Trigger: TAGTGTCCGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACATTGACTTGGAATCAGGGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 72 bp CTCCTAGAAACATCTTCAGCAAAGTGGCAACATCATTaGAGTGAAATTCCCCTGATTCCAAGTCAATGTCAG +
Preference number: 6 (lower is better)
Translates to: LLETSSAKWQHH*SEIPLIPSQCQ
Trigger: CTGACATTGACTTGGAATCAGGGGAATTTCACTCAAATGATGTTGCCACTTTGCTGAAGATGTTTCTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS CAA 72 bp TGGAGAGCCTCAATTTGCCGGTCCTTGTCTGGTATATaGGTCTTGTTTCCTTTATCATCAAACTGCATCAAA +
Preference number: 6 (lower is better)
Translates to: WRASICRSLSGI*VLFPLSSNCIK
Trigger: TTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS TCA 72 bp AGAAACATCTTCAGCAAAGTGGCAACATCATTTGAGTaGAATTCCCCTGATTCCAAGTCAATGTCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: RNIFSKVATSFE*NSPDSKSMSVP
Trigger: TGGAACTGACATTGACTTGGAATCAGGGGAATTTCACTCAAATGATGTTGCCACTTTGCTGAAGATGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5
CDS GCA 72 bp ATGTCAGTTCCATTATTGAGAGCATCCCTTAAAATCTaGTGTCGGACACTATTACCCGGTACTCTAAACAAA +
Preference number: 6 (lower is better)
Translates to: MSVPLLRASLKI*CRTLLPGTLNK
Trigger: TTTGTTTAGAGTACCGGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358308.7
ENST00000358531.9
ENST00000371027.5
ENST00000466484.1
ENST00000492211.5