RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP17 (Homo sapiens)

Ensembl gene IDs: ENSG00000140750

Ensembl transcript IDs: ENST00000289968.11, ENST00000303665.9, ENST00000455311.6, ENST00000570320.5, ENST00000571406.1, ENST00000571480.5, ENST00000571575.5, ENST00000571843.1, ENST00000572314.5, ENST00000573449.5, ENST00000573625.5, ENST00000573703.1, ENST00000573765.1, ENST00000575283.5, ENST00000575412.1, ENST00000575447.1, ENST00000575975.5, ENST00000671797.1, ENST00000671803.1, ENST00000672038.1, ENST00000672083.1, ENST00000672271.1, ENST00000672375.1, ENST00000672412.1, ENST00000672600.1, ENST00000672740.1, ENST00000672814.1, ENST00000672878.1, ENST00000673012.1, ENST00000673130.1, ENST00000673196.1, ENST00000673307.1, ENST00000673465.1, ENST00000673560.1

Found 1300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGTGGTGGAGGGCTaGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGT +
Preference number: 1 (lower is better)
Translates to: SPAPAPLARVEVVEG*ERAFFTGQCSRYHC
Trigger: ACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
3UTR CCA 90 bp AAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: KKEVRLPLLHSPGWK*WRAGKGLSSQGSAL
Trigger: GAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 90 bp AGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGAAGTGGTGGAGGGCTGGGAAAGGGC +
Preference number: 1 (lower is better)
Translates to: SFSLFGLQRKRFACP*STRQGGSGGGLGKG
Trigger: GCCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR TCA 90 bp CTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGT +
Preference number: 1 (lower is better)
Translates to: LQVLLGPCRRPGPAQ*GPPLSSTESFSLFG
Trigger: ACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 90 bp ACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAGGGTGGAAGTGGTGGAGGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: TESFSLFGLQRKRFA*PCSTRQGGSGGGLG
Trigger: TCCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 90 bp GAGGCCCTCCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: EALLCPPLKAFHCSV*KERGSPAPAPLARV
Trigger: CACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR TCA 90 bp CAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTG +
Preference number: 1 (lower is better)
Translates to: QKARSRTVRPSFVLH*KLFTVRSAKKEVRL
Trigger: CAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 90 bp TCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTGGAA +
Preference number: 1 (lower is better)
Translates to: SSRMRPGTSLLAESE*ISGKMLRCGSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 90 bp TTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAG +
Preference number: 1 (lower is better)
Translates to: FTGQCSRYHCLYPAG*GQARLCWLSLSAFQ
Trigger: CTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 90 bp GCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTT +
Preference number: 1 (lower is better)
Translates to: AVGAARINSRDKSFL*AFQQEYSLHSRYFF
Trigger: AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR CCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTT +
Preference number: 1 (lower is better)
Translates to: YHCLYPAGCGQARLC*LSLSAFQERCCDAV
Trigger: AACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 90 bp TCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAATTGGAGTCATTAAATATTCCAATC +
Preference number: 1 (lower is better)
Translates to: SLLAESECISGKMLR*GSETLELESLNIPI
Trigger: GATTGGAATATTTAATGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
3UTR-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAACCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SVCKERGSPAPAPLARVEPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: SVCKERGSPAPAPLARVERKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACATCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GHSALVVASRFSLGRAEGPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: ISSRMRPGTSLLAESECIRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...AATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VLPALTAGTKASYARFSRLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 2 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VGAARINSRDKSFLCAFQLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VLPALTAGTKASYARFSRPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: VGAARINSRDKSFLCAFQVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: QVAVGAARINSRDKSFLCLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LPALTAGTKASYARFSRNLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR CAA 90 bp GGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GLGKGFLHRAVLSVS*SISSRMRPGTSLLA
Trigger: AGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: YSFQVAVGAARINSRDKSPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: TASYSFQVAVGAARINSRRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACACCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LTAGTKASYARFSRNTLSRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: LPALTAGTKASYARFSRNRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: ASYSFQVAVGAARINSRDRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 2 (lower is better)
Translates to: SALVVASRFSLGRAEGQVFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 2 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: PALTAGTKASYARFSRNTSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KASYARFSRNTLSTPGTSLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TASYSFQVAVGAARINSRPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: GHSALVVASRFSLGRAEGQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 2 (lower is better)
Translates to: GHSALVVASRFSLGRAEGSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 2 (lower is better)
Translates to: LTAGTKASYARFSRNTLSVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CCA 90 bp AAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: KGLSSQGSALGIIVYIQQSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...CTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 2 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: LTAGTKASYARFSRNTLSRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: TASYSFQVAVGAARINSRGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: RTASYSFQVAVGAARINSLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR CAA 90 bp TCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGC +
Preference number: 2 (lower is better)
Translates to: SVSLSISSRMRPGTS*LAESECISGKMLRC
Trigger: GCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 2 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 2 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 2 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp CACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGCCAGCTGAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 2 (lower is better)
Translates to: HDLLLNKDFVLGELESQLRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...CAGCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR GCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 2 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp AAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTATCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: KLLPLLLDVGNLHLSYAVSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...TACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR GCA 90 bp ATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: MEAPESWFLRICELGSTWSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...CCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CCA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 2 (lower is better)
Translates to: VGAARINSRDKSFLCAFQSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 2 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp GCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 2 (lower is better)
Translates to: ALGIIVYIQQDAARHVFAFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...AGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CCA 90 bp GAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGCTCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 2 (lower is better)
Translates to: EAPESWFLRICELGSTWLSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR TCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 2 (lower is better)
Translates to: RTASYSFQVAVGAARINSSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 2 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR TCA 90 bp TCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 2 (lower is better)
Translates to: SAMPYRGSTISFSTKTSCRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...GCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR GCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: VGAARINSRDKSFLCAFQDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACATTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 2 (lower is better)
Translates to: RAGKGLSSQGSALGIIVYFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...ATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 2 (lower is better)
Translates to: QVAVGAARINSRDKSFLCLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: QVAVGAARINSRDKSFLCFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACATTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 2 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp AGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: RAGKGLSSQGSALGIIVYAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...ATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: KASYARFSRNTLSTPGTSLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: PALTAGTKASYARFSRNTAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR GCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 2 (lower is better)
Translates to: PALTAGTKASYARFSRNTFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR TCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 2 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 2 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 2 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR CCA 72 bp GTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGC +
Preference number: 3 (lower is better)
Translates to: VRLPLLHSPGWK*WRAGKGLSSQG
Trigger: GCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 72 bp CTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGAAGTGGTGGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: LFGLQRKRFACP*STRQGGSGGGL
Trigger: CAGCCCTCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 3 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: YSFQVAVGAARINSRDKSASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 72 bp TTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAGGGTGGAAGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: FSLFGLQRKRFA*PCSTRQGGSGG
Trigger: TCCACCACTTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 72 bp GCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATACTCTCTCCACTCCAGG +
Preference number: 3 (lower is better)
Translates to: AARINSRDKSFL*AFQQEYSLHSR
Trigger: CCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 72 bp ATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTGCGATGCGGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: MRPGTSLLAESE*ISGKMLRCGSE
Trigger: TTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 72 bp CAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: QCSRYHCLYPAG*GQARLCWLSLS
Trigger: ACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 72 bp GTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTATATCCAGCAGGATGC +
Preference number: 3 (lower is better)
Translates to: VEGWERAFFTGQ*SRYHCLYPAGC
Trigger: GCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR CCA 72 bp CTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: LYPAGCGQARLC*LSLSAFQERCC
Trigger: GCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR TCA 72 bp AGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: RSRTVRPSFVLH*KLFTVRSAKKE
Trigger: CTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR GCA 72 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTC +
Preference number: 3 (lower is better)
Translates to: LCPPLKAFHCSV*KERGSPAPAPL
Trigger: GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp GAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGCTCAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: EAPESWFLRICELGSTWLSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...GAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
3UTR-3UTR CAA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 3 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp CTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: LLPLLLDVGNLHLSYAVQCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...CTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CAA 90 bp AGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: SCFLCFWMLGISTSAMPYCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...GTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CAA 90 bp ATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: MEAPESWFLRICELGSTWSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...CCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
3UTR GCA 72 bp TGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCAT +
Preference number: 3 (lower is better)
Translates to: CWLSLSAFQERC*DAVLKPWNWSH
Trigger: ATGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
3UTR GCA 72 bp CTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGGAATTGGAGT +
Preference number: 3 (lower is better)
Translates to: LCWLSLSAFQER*CDAVLKPWNWS
Trigger: ACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 72 bp CATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGCAAGAGCTGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: HLPQERVFQLSR*FLHILSKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR CCA 72 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACCTCAGCTATGCCGTAC +
Preference number: 3 (lower is better)
Translates to: SNTNLASCFLCF*MLGISTSAMPY
Trigger: GTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CAA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 3 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 3 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR-3UTR CAA 90 bp GCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAATCTGAAACCCTGGAATaGGAGTCATTAAATATTCCA +
Preference number: 3 (lower is better)
Translates to: AGCGQARLCWLSLSAFQESETLE*ESLNIP
Trigger: TGGAATATTTAATGACTCCAATTCCAGGGTTTCAGA...TTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
3UTR-3UTR CAA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 3 (lower is better)
Translates to: ALTAGTKASYARFSRNTLVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR-3UTR CAA 90 bp AATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAACTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: NLHLSYAVQRVHDLLLNKLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...TTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CAA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: NTNLASCFLCFWMLGISTLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
3UTR-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 3 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR GCA 72 bp GCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAATTGGAGTCATTAAAT +
Preference number: 3 (lower is better)
Translates to: AESECISGKMLR*GSETLELESLN
Trigger: ATTTAATGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
3UTR-3UTR CAA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 3 (lower is better)
Translates to: NTNLASCFLCFWMLGISTLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
3UTR CCA 72 bp TTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGG +
Preference number: 3 (lower is better)
Translates to: LEYLFLMEAPES*FLRICELGSTW
Trigger: CCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCCCTGGGCTCGGCCCCTaGTCCAGTATGCCCGCGGAA +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSPGLGP*SSMPAE
Trigger: TTCCGCGGGCATACTGGAGCAGGGGCCGAGCCCAGG...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTAGGACTGCCGTCGCCTaGGCTCGGCCCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSRTAVA*ARPLLQ
Trigger: CTGGAGCAGGGGCCGAGCCCAGGCGACGGCAGTCCT...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTCTGGCCCCCGGGGTaGCCAGGAGGTGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCLWPPG*PGGGLP
Trigger: GGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSVGASS*LGLILA
Trigger: GGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCAC...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGCTCGGCGCAGTGTATaGGGGCTGGGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLARRSV*GLGPAA
Trigger: TGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLVPPRR*AWKSIS
Trigger: GCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCAC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSVPPRR*AWKSIS
Trigger: GCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCAC...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGCTCGGCGCAGTGTATaGGGGCTGGGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCARRSV*GLGPAA
Trigger: TGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCATCTGTGGGCGGAAGTaGCGGCTGGAAAGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLICGRK*RLESGG
Trigger: TCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGAT...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAAGGACTGCCGTCGCCTaGGCTCGGCCCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVERTAVA*ARPLLQ
Trigger: CTGGAGCAGGGGCCGAGCCCAGGCGACGGCAGTCCT...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGGTGGGTGGCTTTGGTaGCAGACTGGGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVGGWLW*QTGWML
Trigger: CAGCATCCACCCAGTCTGTCACCAAAGCCACCCACC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCCTGGGCTCGGCCCCTaGTCCAGTATGCCCGCGGAA +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHPGLGP*SSMPAE
Trigger: TTCCGCGGGCATACTGGAGCAGGGGCCGAGCCCAGG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTGTGAGGTTGGCCCATaGAGAGCTGGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVCEVGP*RAGGSQ
Trigger: CTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACA...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGCAGTGTATGCGGGCTaGGCCCTGCAGCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVAVYAG*ALQHCE
Trigger: CTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGGAGAGGGGCTTCGGGTaGGTGGCTTTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLERGFG*VALVTD
Trigger: GTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTC...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGTCCGCCCACTTATCTTaGTGGGCTCGCATTTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLSAHLS*WARISG
Trigger: CCCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGA...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGGATTGGAGACAAGCTaGTGGAGTACCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLGLETS*WSTSGV
Trigger: CACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGGGATTGGAGACAAGCTaGTGGAGTACCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLGLETS*WSTSGV
Trigger: CACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCC...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKARFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGGCGGAAGTGGCGGCTaGAAAGCGGGGGATATGTGC +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCGGSGG*KAGDMC
Trigger: GCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCTGGCCCATGGAGAGCTaGTGGGAGCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVWPMES*WEPAAA
Trigger: GGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCA...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLGKGFLHRAVLSVSLGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...CAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCTCTGGCCCCCGGGGTaGCCAGGAGGTGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRLWPPG*PGGGLP
Trigger: GGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLLETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGACACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTCCGCCCACTTATCTTaGTGGGCTCGCATTTCGGGG +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLSAHLS*WARISG
Trigger: CCCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGCAGCTGCCTGGGGCTaGTTTTGGCCAGATGCTATC +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLAAAWG*FWPDAI
Trigger: GATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAGGCCCTGCAGCATTGTaGGGTTGGCCCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGGPAAL*GWPMES
Trigger: GCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCC...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: WWRAGKGLSSQGSALGIIPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...AATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACCTGGCCCTGGAAACATaGCACCAAGCGCTTATGGGA +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHLALET*HQALMG
Trigger: TCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAG...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPWCWHS*RYRVLR
Trigger: CCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCA...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGATGCGGGCTGGGCCCTaGAGCATTGTGAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARMRAGP*SIVRLA
Trigger: GGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCAT...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGATGCGGGCTGGGCCCTaGAGCATTGTGAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGMRAGP*SIVRLA
Trigger: GGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCAT...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATGCGGGCTGGGCCCTaGAGCATTGTGAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTMRAGP*SIVRLA
Trigger: GGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCAT...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGGGCGGGGGACAGCCTaGCAGCTACTACATCGCTTC +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVGRGTA*QLLHRF
Trigger: GAAGCGATGTAGTAGCTGCCAGGCTGTCCCCCGCCC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGATCACTGCAACCACATaGACGGATGTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLITATT*TDVAAA
Trigger: GGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGAT...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCAGGGTCCTTCGGTTTaGGAGGACTGCCGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHQGPSV*EDCRRL
Trigger: CAGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGTGAGGTTGGCCCATaGAGAGCTGGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCCEVGP*RAGGSQ
Trigger: CTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPLETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVLETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKASPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVESPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTACAGCATGGGGGTCTaGATAGAACTCATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSYSMGV*IELIQV
Trigger: CACCTGGATGAGTTCTATTCAGACCCCCATGCTGTA...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSPVWNE*LELGVV
Trigger: CACCACCCCGAGTTCTAATCACTCATTCCACACTGG...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCGGCCCTGCAGCATTGTaGGGTTGGCCCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGGPAAL*GWPMES
Trigger: GCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCC...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGGTGGGTGGCTTTGGTaGCAGACTGGGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTGGWLW*QTGWML
Trigger: CAGCATCCACCCAGTCTGTCACCAAAGCCACCCACC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVESASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGATTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTTGTGAGGTTGGCCCATaGAGAGCTGGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKACEVGP*RAGGSQ
Trigger: CTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACA...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCTCTGGCCCCCGGGGTaGCCAGGAGGTGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLLWPPG*PGGGLP
Trigger: GGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAG...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGATCCGCCCACTTATCTTaGTGGGCTCGCATTTCGGGG +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGSAHLS*WARISG
Trigger: CCCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGA...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATCCGCCCACTTATCTTaGTGGGCTCGCATTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVESAHLS*WARISG
Trigger: CCCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTTCACATCGCTGGTCTaGGCAAGCTTTGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHFTSLV*ASFARN
Trigger: GTTCCTTGCAAAGCTTGCTCAGACCAGCGATGTGAA...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVEGWERAFFTGQCSRYHAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...ATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGGCCCTCCTCCTTCATaGCTGTCTCCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGGPPPS*LSPEAA
Trigger: TGCTGCTTCTGGAGACAGGCATGAAGGAGGAGGGCC...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGCTTTCTATTTAGAGTaGCACCCCGCCGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHAFYLE*HPAGGP
Trigger: AGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTWCWHS*RYRVLR
Trigger: CCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGTTGTTTCTCCCTGGTaGTGGCACAGCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLVVSPW*WHSCRY
Trigger: GTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAAC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGCTCGGCGCAGTGTATaGGGGCTGGGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHARRSV*GLGPAA
Trigger: TGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTGCTCTGCCCACGGTCTaGTTAGCCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKAALPTV*LASCFM
Trigger: CATGAAGCAGCTGGCTAACCAGACCGTGGGCAGAGC...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTCCACATGGACGGATGTaGCTGCTGCCATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLPHGRM*LLPFQQ
Trigger: TTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGG...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKALETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKAPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVSLSISSRMRPGTSLLAGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...AGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRAGKGLSSQGSALGIIVLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCGMVAY*PHRVQA
Trigger: CGCCTGGACACGGTGCGGTCAATATGCCACCATTCC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTGTGGTGGCAACTTCTaGCATGTTCTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLCGGNF*HVLHKS
Trigger: AGACTTGTGGAGAACATGTCAGAAGTTGCCACCACA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTTCACATCGCTGGTCTaGGCAAGCTTTGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLFTSLV*ASFARN
Trigger: GTTCCTTGCAAAGCTTGCTCAGACCAGCGATGTGAA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTTTCCAGTGTGGAATaGGTGATTAGAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSVSSVE*VIRTRG
Trigger: ACCCCGAGTTCTAATCACTCATTCCACACTGGAAAC...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGGCCAGATGCTATCTaGCTGTTGTTTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLWPDAI*LLFLPG
Trigger: ACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCTGGCCCTGGAAACATaGCACCAAGCGCTTATGGGA +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGLALET*HQALMG
Trigger: TCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGWCWHS*RYRVLR
Trigger: CCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCA...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKALLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKALYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCACATGGACGGATGTaGCTGCTGCCATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCPHGRM*LLPFQQ
Trigger: TTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATCACTGCAACCACATaGACGGATGTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGITATT*TDVAAA
Trigger: GGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGAT...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTGGCCCATGGAGAGCTaGTGGGAGCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHWPMES*WEPAAA
Trigger: GGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCA...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTGTGAGGTTGGCCCATaGAGAGCTGGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCCEVGP*RAGGSQ
Trigger: CTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCCTCTGGCCCCCGGGGTaGCCAGGAGGTGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSLWPPG*PGGGLP
Trigger: GGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAG...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAATTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGCGQARLCWLSLSAFQEFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...TTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp GGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLGKGFLHRAVLSVSLFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...CAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAACCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVEPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSVSLSISSRMRPGTSLLHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...CAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVEEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YHCLYPAGCGQARLCWLSGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...ACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CGQARLCWLSLSAFQERCSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WRAGKGLSSQGSALGIIVPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...GACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGGCCAGATGCTATCTaGCTGTTGTTTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCWPDAI*LLFLPG
Trigger: ACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLSLSAFQERCCDAVLKPPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGATCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGCCAGCTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: STISFSTKTSCWESSRASSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKASTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGTTGTACATGTCTGCTaGAAGTTGATCCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSVVHVC*KLILAL
Trigger: CAGTGCAAGGATCAACTTGCAGCAGACATGTACAAC...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGACGGATGTGGCTGCTaGCATTTCAGCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHDGCGC*HFSKCS
Trigger: GGAACACTTGCTGAAATGGCAGCAGCCACATCCGTC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGACGGATGTGGCTGCTaGCATTTCAGCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVDGCGC*HFSKCS
Trigger: GGAACACTTGCTGAAATGGCAGCAGCCACATCCGTC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACCGGGCACCACGGTGCTaGCATCTGTGGGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDRAPRC*HLWAEV
Trigger: CACTTCCGCCCACAGATGGCAGCACCGTGGTGCCCG...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCAGCGGGCACCACGGTaGTGCCATCTGTGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSQRAPR*CHLWAE
Trigger: TTCCGCCCACAGATGGCAGCACCGTGGTGCCCGCTG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGCCCCTGCTCCAGTATaGCCGCGGAAGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNAPAPV*PRKRGQ
Trigger: CTGTCCCCTCTTCCGCGGGCATACTGGAGCAGGGGC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WWRAGKGLSSQGSALGIIFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...AATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACATCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATAGGTTCGCCTGCCCCTaGTCCACTCGCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNRFACP*STRQGG
Trigger: TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAATCACTGCAACCACATaGACGGATGTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETITATT*TDVAAA
Trigger: GGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGAT...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCGGTGCTGCCATCTGTaGGCGGAAGTGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPARCCHL*AEVAAG
Trigger: TCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCG...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAACTGTTGTTTCTCCCTaGTGCTGGCACAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVETVVSP*CWHSCR
Trigger: TCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGT...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGGAGAGGGGCTTCGGGTaGGTGGCTTTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRERGFG*VALVTD
Trigger: GTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTC...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCGGGGTGCTGAGAGCTaGGAGGGGGCGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIRGAES*EGAEGW
Trigger: CCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVESNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTATGTCTGCTGCAAGTTaGTCCTTGCACTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLMSAAS*SLHCST
Trigger: AGTAGAACAGTGCAAGGATCAACTTGCAGCAGACAT...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGTGGTGGCAACTTCTaGCATGTTCTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCCGGNF*HVLHKS
Trigger: AGACTTGTGGAGAACATGTCAGAAGTTGCCACCACA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGGCCCTGCAGCATTGTaGGGTTGGCCCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLGPAAL*GWPMES
Trigger: GCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAACCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: SSQGSALGIIVYIQQDAAPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...GGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp CTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: LSVSLSISSRMRPGTSLLPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...CAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TCTCCAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: SPASSPGESLPAESMLLASASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...TGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCACACGTCTCCAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: STRLQHLPQERVFQLSRCSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...GCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAGACGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCGGGCACCACGGTGCTaGCATCTGTGGGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRRAPRC*HLWAEV
Trigger: CACTTCCGCCCACAGATGGCAGCACCGTGGTGCCCG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAACAGCGGGCACCACGGTaGTGCCATCTGTGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKQRAPR*CHLWAE
Trigger: TTCCGCCCACAGATGGCAGCACCGTGGTGCCCGCTG...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLVGASS*LGLILA
Trigger: GGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCAC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNVGASS*LGLILA
Trigger: GGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCAC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGCTCGGCGCAGTGTATaGGGGCTGGGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFARRSV*GLGPAA
Trigger: TGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGCCAGGAGGTGGGTTaGCCGGTTTCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGQEVG*PVSGVL
Trigger: CAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCATCAGTGGCGTGGCCTaGGTAGGGGGCTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSISGVA*VGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGAT...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVEGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RAGKGLSSQGSALGIIVYVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...ATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCGGGAGTCCCAAAGGCTaGTTTTTCCGCCCACTTATC +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGGSPKG*FFRPLI
Trigger: GATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCC...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCACATGGACGGATGTaGCTGCTGCCATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGPHGRM*LLPFQQ
Trigger: TTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGG...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGGCGGAAGTGGCGGCTaGAAAGCGGGGGATATGTGC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLGGSGG*KAGDMC
Trigger: GCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTATCTGTGGGCGGAAGTaGCGGCTGGAAAGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSICGRK*RLESGG
Trigger: TCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGAT...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCAGGGTCCTTCGGTTTaGGAGGACTGCCGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAQGPSV*EDCRRL
Trigger: CAGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTG...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGTGGCCCATGGAGAGCTaGTGGGAGCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRWPMES*WEPAAA
Trigger: GGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCA...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCACTGGGCAATGCCATaGGGTTGGGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFHWAMP*GWEGPG
Trigger: GCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTG...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSSQGSALGIIVYIQQDLGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...ATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGTCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVSLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGACT...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WLSLSAFQERCCDAVLKPSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp AGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGKGLSSQGSALGIIVYPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...ATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVERESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGTCGGCATGCTGAATaGTGGGTTCAATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHSRHAE*WVQSLQ
Trigger: TTGCAGTGATTGAACCCATCATTCAGCATGCCGACT...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAACCAGTCGGCATGCTaGATGATGGGTTCAATCACT +
Preference number: 4 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGNQSAC*MMGSIT
Trigger: AGTGATTGAACCCATCATTCAGCATGCCGACTGGTT...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGGTGGGTGGCTTTGGTaGCAGACTGGGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSGGWLW*QTGWML
Trigger: CAGCATCCACCCAGTCTGTCACCAAAGCCACCCACC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGGTGGGTGGCTTTGGTaGCAGACTGGGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQGGWLW*QTGWML
Trigger: CAGCATCCACCCAGTCTGTCACCAAAGCCACCCACC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: CGQARLCWLSLSAFQERCAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...GCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: YHCLYPAGCGQARLCWLSPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...ACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: PILQAASSASGCWESPPQSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp GAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAATCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ESPPQLCRTEGPRSPSQQSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...TTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PILQAASSASGCWESPPQSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACATCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: EGPRSPSQQRLRAGRARESPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...CTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGATGGGTTCAATCACTaGAACCACATGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVDGFNH*NHMDGC
Trigger: ACATCCGTCCATGTGGTTGCAGTGATTGAACCCATC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCAAAGCGGGGGATATGTaGTTTCTATTTAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVKAGDM*FLFRVP
Trigger: TGGCACTCTAAATAGAAAGCACATATCCCCCGCTTT...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKVGASS*LGLILA
Trigger: GGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCAC...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAATGCGGGCTGGGCCCTaGAGCATTGTGAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKMRAGP*SIVRLA
Trigger: GGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCAT...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGTTA +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARGKMLR*GSETLL
Trigger: TAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGCCCCGCCGGTGGGCCTaGAAGTCCATAAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQPRRWA*KSISFT
Trigger: TGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGG...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCCGGTGCTGCCATCTGTaGGCGGAAGTGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLRCCHL*AEVAAG
Trigger: TCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCG...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGACTGTTGTTTCTCCCTaGTGCTGGCACAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRTVVSP*CWHSCR
Trigger: TCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGT...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCGAGAGGGGCTTCGGGTaGGTGGCTTTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSERGFG*VALVTD
Trigger: GTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTC...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: RAGKGLSSQGSALGIIVYFGVHQ*RGLRRG
Trigger: CCCCCTACGCAGGCCACGCCACTGATGCACACCAAA...ATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSREGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: YHCLYPAGCGQARLCWLSGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...ACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALGIIVYIQQDAARHVFAPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...AGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp CTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCACCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LHRAVLSVSLSISSRMRPPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...TGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGGGGTGGGGGCACGCTaGGCCGGTTCCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSGVGAR*AGSLAL
Trigger: CAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAATCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTCGCCAGGGTGGAAGTaGTGGAGGGCTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFSPGWK*WRAGKG
Trigger: CCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGA...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTGMVAY*PHRVQA
Trigger: CGCCTGGACACGGTGCGGTCAATATGCCACCATTCC...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp AATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NLHLSYAVQRVHDLLLNKGMVAY*PHRVQA
Trigger: CGCCTGGACACGGTGCGGTCAATATGCCACCATTCC...TTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCAGTCGGCATGCTGAATaGTGGGTTCAATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GHSALVVASRFSLGRAEGSRHAE*WVQSLQ
Trigger: TTGCAGTGATTGAACCCATCATTCAGCATGCCGACT...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGCAGCTGCCTGGGGCTaGTTTTGGCCAGATGCTATC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAAAAWG*FWPDAI
Trigger: GATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGGCCCTGCAGCATTGTaGGGTTGGCCCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLGPAAL*GWPMES
Trigger: GCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCAGGTCCCGCACAGTaGGGCCCTCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSPGPAQ*GPPLSS
Trigger: GGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGG...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: WRAGKGLSSQGSALGIIVSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...GACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCTGGCCCTGGAAACATaGCACCAAGCGCTTATGGGA +
Preference number: 4 (lower is better)
Translates to: SGCWESPPQLCRTEGPRSLALET*HQALMG
Trigger: TCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAG...AGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGTTGTACATGTCTGCTaGAAGTTGATCCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVVVHVC*KLILAL
Trigger: CAGTGCAAGGATCAACTTGCAGCAGACATGTACAAC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCAAAGTTGTACATGTCTaGTGCAAGTTGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVKVVHV*CKLILA
Trigger: TGCAAGGATCAACTTGCAGCAGACATGTACAACTTT...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCGGCCCTCCTCCTTCATaGCTGTCTCCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSGPPPS*LSPEAA
Trigger: TGCTGCTTCTGGAGACAGGCATGAAGGAGGAGGGCC...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGCCCCTGCTCCAGTATaGCCGCGGAAGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSAPAPV*PRKRGQ
Trigger: CTGTCCCCTCTTCCGCGGGCATACTGGAGCAGGGGC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGGATTGGAGACAAGCTaGTGGAGTACCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNGLETS*WSTSGV
Trigger: CACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTTCAGGGTTACCCCCTaGCAGGGTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTFRVTP*QGLRSW
Trigger: CCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: WLSLSAFQERCCDAVLKPGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVEFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGTTCTCCTTGGGCCGTaGAGAAGGCCAGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLVLLGP*RRPGPA
Trigger: TGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAAC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACATTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGCTCTGCCCACGGTCTaGTTAGCCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQALPTV*LASCFM
Trigger: CATGAAGCAGCTGGCTAACCAGACCGTGGGCAGAGC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCFLCFWMLGISTSAMPYTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...GTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCCACATGGACGGATGTaGCTGCTGCCATTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRPHGRM*LLPFQQ
Trigger: TTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGACTGTTGTTTCTCCCTaGTGCTGGCACAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRTVVSP*CWHSCR
Trigger: TCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGT...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGAGAGGGGCTTCGGGTaGGTGGCTTTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTERGFG*VALVTD
Trigger: GTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGAGAGGGGCTTCGGGTaGGTGGCTTTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKERGFG*VALVTD
Trigger: GTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTC...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCTAGGGGCGGAGTACTaGGGGGCGTTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWILGAEY*GALESG
Trigger: CCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLLAESECISGKMLRCGSAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...AGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGCGGTTCTGAAACCCTaGAATTGGAGTCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: SVCKERGSPAPAPLARVEAVLKP*NWSLLL
Trigger: TAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCTCCACTCGCCAGGGTaGAAGTGGTGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSLHSPG*KWWRAG
Trigger: CCCAGCCCTCCACCACTTCCACCCTGGCGAGTGGAG...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GQARLCWLSLSAFQERCCSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
3UTR CAA 72 bp AAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATGCGGCCAGGCACGTCT +
Preference number: 4 (lower is better)
Translates to: KGFLHRAVLSVS*SISSRMRPGTS
Trigger: AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGMVAY*PHRVQA
Trigger: CGCCTGGACACGGTGCGGTCAATATGCCACCATTCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SNTNLASCFLCFWMLGISGMVAY*PHRVQA
Trigger: CGCCTGGACACGGTGCGGTCAATATGCCACCATTCC...GGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGGTGGGTGGCTTTGGTaGCAGACTGGGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLGGWLW*QTGWML
Trigger: CAGCATCCACCCAGTCTGTCACCAAAGCCACCCACC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIGCGGG*LGAWIG
Trigger: TCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCC...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCCCCCTGCCAGGGTCTaGGGAGCTGGCAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFPPARV*GAGRLG
Trigger: CCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCATCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: LTPILQAASSASGCWESPSASVP*WPWKHA
Trigger: GGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGA...TGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLSSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGATCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TEGPRSPSQQRLRAGRARSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...TCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp CTCCAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQHLPQERVFQLSRCFLHSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...ATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YHCLYPAGCGQARLCWLSLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...ACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR GCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPASSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATTCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNSSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp GGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: GGGLGKGFLHRAVLSVSLFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...CAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACAGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GGGLGKGFLHRAVLSVSLLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...CAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACATTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TEPAVTIHGHGSEGTGETFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...TGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGTTA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRGKMLR*GSETLL
Trigger: TAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGGGCGGGGGACAGCCTaGCAGCTACTACATCGCTTC +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSGRGTA*QLLHRF
Trigger: GAAGCGATGTAGTAGCTGCCAGGCTGTCCCCCGCCC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCGCTCTGCCCACGGTCTaGTTAGCCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: NTNLASCFLCFWMLGISTALPTV*LASCFM
Trigger: CATGAAGCAGCTGGCTAACCAGACCGTGGGCAGAGC...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPATKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTCAATCGCAATGTTGCTaGGAGTCATTTTATTCACAT +
Preference number: 4 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLQSQCC*ESFYSH
Trigger: ATGTGAATAAAATGACTCCCAGCAACATTGCGATTG...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGCAGTGTATGCGGGCTaGGCCCTGCAGCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLAVYAG*ALQHCE
Trigger: CTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGCAGTGTATGCGGGCTaGGCCCTGCAGCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSAVYAG*ALQHCE
Trigger: CTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGGGGTGGCCAGGAGGTaGGTTGCCCGGTTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFGVARR*VARFRG
Trigger: CCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGTTCCTGAAGAACTCTaGCCCCCGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLVPEEL*PPGWPG
Trigger: TCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAAC...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFLETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGLGGP*LLGLVC
Trigger: GCACACCAAACCCAATAGCCAGGGCCCTCCCAACCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCGCAATGCCATGGGGTTaGGAGGGCCCTGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSAMPWG*EGPGYW
Trigger: CCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGC...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: YHCLYPAGCGQARLCWLSEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...ACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCTGAAACCCTGGAATTaGAGTCTGTTACTATCTTGG +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGLKPWN*SLLLSW
Trigger: CCAAGATAGTAACAGACTCCAATTCCAGGGTTTCAG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCCTCCAGGTTCTCCTTaGGCCGTGCAGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIPPGSP*AVQKAR
Trigger: CCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTACCCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGTLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGGGT...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR CCA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCATCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGHLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGATG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: EGPRSPSQQRLRAGRAREFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...CTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGCAGCTGCCTGGGGCTaGTTTTGGCCAGATGCTATC +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCAAAWG*FWPDAI
Trigger: GATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGCAGCTGCCTGGGGCTaGTTTTGGCCAGATGCTATC +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLAAAWG*FWPDAI
Trigger: GATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGCTGCGATGCGGTTCTaGAACCCTGGAATTGGAGTC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRAAMRF*NPGIGV
Trigger: GACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AEGQVPHSEALLCPPLKADTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: NTNLASCFLCFWMLGISTSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCAAAGTTGTACATGTCTaGTGCAAGTTGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVKVVHV*CKLILA
Trigger: TGCAAGGATCAACTTGCAGCAGACATGTACAACTTT...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGGCCCTCCTCCTTCATaGCTGTCTCCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLGPPPS*LSPEAA
Trigger: TGCTGCTTCTGGAGACAGGCATGAAGGAGGAGGGCC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGATGGACGGATGTGGCTaGTGCCATTTCAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQMDGCG*CHFSKC
Trigger: ACACTTGCTGAAATGGCAGCAGCCACATCCGTCCAT...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGTTGTTTCTCCCTGGTaGTGGCACAGCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNVVSPW*WHSCRY
Trigger: GTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAAC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGGATTGGAGACAAGCTaGTGGAGTACCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLGLETS*WSTSGV
Trigger: CACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGATGCTCACTGGGCAATaGCATGGGGTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLMLTGQ*HGVGRA
Trigger: GGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCAT...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAATTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: AGCGQARLCWLSLSAFQEFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...TTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGAGAAAGAGGTTCGCCTaGCCCTGCTCCACTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLRKRFA*PCSTRQ
Trigger: CTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCT...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PILQAASSASGCWESPPQRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: LLPLLLDVGNLHLSYAVQATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...CTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp GAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGCTCGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: EAPESWFLRICELGSTWLATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...GAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTNLASCFLCFWMLGISTTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGCTCTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: EAPESWFLRICELGSTWLCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...GAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGGGAGTCCCAAAGGCTaGTTTTTCCGCCCACTTATC +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQGSPKG*FFRPLI
Trigger: GATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGGGAGTCCCAAAGGCTaGTTTTTCCGCCCACTTATC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAGSPKG*FFRPLI
Trigger: GATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGATCACTGCAACCACATaGACGGATGTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLITATT*TDVAAA
Trigger: GGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGAT...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCCCGCCGGTGGGCCTaGAAGTCCATAAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSPRRWA*KSISFT
Trigger: TGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGG...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGCAGTGTATGCGGGCTaGGCCCTGCAGCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSAVYAG*ALQHCE
Trigger: CTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSREGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GLSSQGSALGIIVYIQQDEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...ATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCCGGTTCCTTGGCTTTaGTACTGGTCTCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCPVPWL*YWSRSR
Trigger: CCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCTGGGCCGGTTCCTTaGCTTTGGTACTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFAGPVP*LWYWSR
Trigger: CCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: LSVSLSISSRMRPGTSLLQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...CAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCTGAAACCCTGGAATTaGAGTCTTAGTCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRLKPWN*SLSPGN
Trigger: GTTTCCAGGACTAAGACTCCAATTCCAGGGTTTCAG...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS-3UTR TCA 90 bp TCTCCAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCAAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SPASSPGESLPAESMLLARESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...TGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp GAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: EGPRSPSQQRLRAGRARELKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...CTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp ACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGATTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TEGPRSPSQQRLRAGRARFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...TCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGATGTCTGCTGCAAGTTaGTCCTTGCACTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRMSAAS*SLHCST
Trigger: AGTAGAACAGTGCAAGGATCAACTTGCAGCAGACAT...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAATACAGCATGGGGGTCTaGATAGAACTCATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQYSMGV*IELIQV
Trigger: CACCTGGATGAGTTCTATTCAGACCCCCATGCTGTA...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACATACAGCATGGGGGTCTaGATAGAACTCATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTYSMGV*IELIQV
Trigger: CACCTGGATGAGTTCTATTCAGACCCCCATGCTGTA...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCTACAGCATGGGGGTCTaGATAGAACTCATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSYSMGV*IELIQV
Trigger: CACCTGGATGAGTTCTATTCAGACCCCCATGCTGTA...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTTCACATCGCTGGTCTaGGCAAGCTTTGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCFTSLV*ASFARN
Trigger: GTTCCTTGCAAAGCTTGCTCAGACCAGCGATGTGAA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGAGGTACAAATGCTTCTaGTACATTAAATTCCACCTC +
Preference number: 4 (lower is better)
Translates to: HCSVCKERGSPAPAPLARRYKCF*YIKFHL
Trigger: GAGGTGGAATTTAATGTATCAGAAGCATTTGTACCT...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTPVWNE*LELGVV
Trigger: CACCACCCCGAGTTCTAATCACTCATTCCACACTGG...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGTTTCCAGTGTGGAATaGGTGATTAGAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHVSSVE*VIRTRG
Trigger: ACCCCGAGTTCTAATCACTCATTCCACACTGGAAAC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: VSLSISSRMRPGTSLLAESFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...CTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATATTCTGCAGCAAGTCTaGAGGAGCGCAGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDILQQV*RSAASL
Trigger: GAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAAT...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAATCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGCTGCGATGCGGTTCTaGAACCCTGTTACTATCTTG +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLAAMRF*NPVTIL
Trigger: CAAGATAGTAACAGGGTTTCAGAACCGCATCGCAGC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR GCA 90 bp GCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATATTTTCTGGCCCTGGAAACATaGCACCAAGCGCTTATGGGA +
Preference number: 4 (lower is better)
Translates to: ASSPGESLPAESMLLAYFLALET*HQALMG
Trigger: TCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAG...AAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGGCCCTCCTCCTTCATaGCTGTCTCCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLGPPPS*LSPEAA
Trigger: TGCTGCTTCTGGAGACAGGCATGAAGGAGGAGGGCC...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGGATGTGGCTGCTaGCATTTCAGCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRDGCGC*HFSKCS
Trigger: GGAACACTTGCTGAAATGGCAGCAGCCACATCCGTC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCATGGACGGATGTGGCTaGTGCCATTTCAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSMDGCG*CHFSKC
Trigger: ACACTTGCTGAAATGGCAGCAGCCACATCCGTCCAT...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIWCWHS*RYRVLR
Trigger: CCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCA...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGTTGTTTCTCCCTGGTaGTGGCACAGCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRVVSPW*WHSCRY
Trigger: GTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAAC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGATTGGAGACAAGCTaGTGGAGTACCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFGLETS*WSTSGV
Trigger: CACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCATCCAGCATGTGGCTGTaGAGTTTCAGGGTTACCCCC +
Preference number: 4 (lower is better)
Translates to: ERAFFTGQCSRYHCLYPASSMWL*SFRVTP
Trigger: GGGGGTAACCCTGAAACTGCACAGCCACATGCTGGA...TGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp GGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQARLCWLSLSAFQERCCAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...GCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp ATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ISSRMRPGTSLLAESECIAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...AATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp GCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ALGIIVYIQQDAARHVFALAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...AGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGGCCAGGCACGTCTTTaGTGGCTGAGTCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLGQARL*WLSLSA
Trigger: TGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCC...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: AVLSVSLSISSRMRPGTSDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...AGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATATTCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: QHLPQERVFQLSRCFLHIRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...AATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: SYAVQRVHDLLLNKDFVLKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...CAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGAGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: CFLCFWMLGISTSAMPYRATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...TCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp CTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCAACAAAGACTTCGTGCTaGGAGAGCTCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LTPILQAASSASGCWESPTKTSC*ESSRAS
Trigger: GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGT...TGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGATGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: CFLCFWMLGISTSAMPYRCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...TCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp AGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SYAVQRVHDLLLNKDFVLCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...CAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp TTGGGAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LGISTSAMPYRGSTISFSEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...TGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCAATCGCAATGTTGCTaGGAGTCATTTTATTCACAT +
Preference number: 4 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHQSQCC*ESFYSH
Trigger: ATGTGAATAAAATGACTCCCAGCAACATTGCGATTG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCAATCGCAATGTTGCTaGGAGTCATTTTATTCACAT +
Preference number: 4 (lower is better)
Translates to: SALVVASRFSLGRAEGQVQSQCC*ESFYSH
Trigger: ATGTGAATAAAATGACTCCCAGCAACATTGCGATTG...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCACTGTTGTTTCTCCCTaGTGCTGGCACAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFTVVSP*CWHSCR
Trigger: TCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGCGGCGGTGGGTGATTaGGAGCTTGGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSAAVGD*ELGLET
Trigger: TGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTGGAATTGGAGTCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SAFQERCCDAVLKPWNWSPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...ACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS-3UTR CCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGAGGGCCCTGGCTATTaGGTTTGGTGTGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFEGPGY*VWCASV
Trigger: CACTGATGCACACCAAACCCAATAGCCAGGGCCCTC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGGGAGGGGTGTGAGATaGCTGCTCAAGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSGRGVR*LLKSML
Trigger: GAGCATGGACTTGAGCAGCCATCTCACACCCCTCCC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGGCGGTTCTGAAACCCTaGAATTGGAGTCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRAVLKP*NWSLLL
Trigger: TAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGC...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCGGTTCTGAAACCCTaGAATTGGAGTCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLAVLKP*NWSLLL
Trigger: TAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGC...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCAGGGTCCTTCGGTTTaGGAGGACTTTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNQGPSV*EDFPSS
Trigger: TGAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS-3UTR CCA 90 bp GTGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATCATCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VVEGWERAFFTGQCSRYHHLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGATG...ATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CCA 90 bp GTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGGCGGTTCTGAAACCCTaGAATTGGAGTCTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSLSISSRMRPGTSLLAEAVLKP*NWSLSP
Trigger: AGGACTAAGACTCCAATTCCAGGGTTTCAGAACCGC...CTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
3UTR CAA 72 bp TTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSISSRMRPGTS*LAESECISGKM
Trigger: CATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPARESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTGGGAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCACTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LGISTSAMPYRGSTISFSLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...TGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATAGTCGGCATGCTGAATaGTGGGTTCAATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNSRHAE*WVQSLQ
Trigger: TTGCAGTGATTGAACCCATCATTCAGCATGCCGACT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCPVWNE*LELGVV
Trigger: CACCACCCCGAGTTCTAATCACTCATTCCACACTGG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGCTGCTGTCCCCAGCTaGGTGGACACCAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFAAVPS*VDTRRL
Trigger: CAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTCCATGGGCATGGTTCTaGGGGGACTGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFPWAWF*GDWGDT
Trigger: TGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGG...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCSSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCATCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTPILQAASSASGCWESPSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...TGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ESPPQLCRTEGPRSPSQQTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...TTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAATGGACGGATGTGGCTaGTGCCATTTCAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKMDGCG*CHFSKC
Trigger: ACACTTGCTGAAATGGCAGCAGCCACATCCGTCCAT...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGATGGGTTCAATCACTaGAACCACATGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNDGFNH*NHMDGC
Trigger: ACATCCGTCCATGTGGTTGCAGTGATTGAACCCATC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: WLSLSAFQERCCDAVLKPLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPALAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: VGAARINSRDKSFLCAFQFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCCGCTTATGGGAATGGTaGCATATTGACCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SNTNLASCFLCFWMLGISRLWEW*HIDRTV
Trigger: CACGGTGCGGTCAATATGCCACCATTCCCATAAGCG...GGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp ACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: TNLASCFLCFWMLGISTSKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...TGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SAMPYRGSTISFSTKTSCSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTGCTTCCTCTGCTTCTaGATGTTGGGAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: NTNLASCFLCFWMLGISTCFLCF*MLGIST
Trigger: GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp AAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTAGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KLLPLLLDVGNLHLSYAVEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...TACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CCA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PILQAASSASGCWESPPQEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCAACAAAATTTTGTGGTaGCAACTTCTGACATGTTCT +
Preference number: 4 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTNKILW*QLLTCS
Trigger: AGAACATGTCAGAAGTTGCCACCACAAAATTTTGTT...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFRGLRR*VIGSLD
Trigger: ATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCT...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGAGGAGCTGGCAGACTaGGGTTCTGTTTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSEELAD*GSVFLG
Trigger: CCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAACAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
3UTR CAA 72 bp CCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGCTGTCAGAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PQERVFQLSRCF*HILSKSCQRQF
Trigger: AAACTGCCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR TCA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PILQAASSASGCWESPPQLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: NTNLASCFLCFWMLGISTFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCATGTCTGCTGCAAGTTaGTCCTTGCACTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLMSAAS*SLHCST
Trigger: AGTAGAACAGTGCAAGGATCAACTTGCAGCAGACAT...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGTGGTGGCAACTTCTaGCATGTTCTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLCGGNF*HVLHKS
Trigger: AGACTTGTGGAGAACATGTCAGAAGTTGCCACCACA...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTTTCACATCGCTGGTCTaGGCAAGCTTTGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFFTSLV*ASFARN
Trigger: GTTCCTTGCAAAGCTTGCTCAGACCAGCGATGTGAA...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCAACCAGTCGGCATGCTaGATGATGGGTTCAATCACT +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFNQSAC*MMGSIT
Trigger: AGTGATTGAACCCATCATTCAGCATGCCGACTGGTT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIPVWNE*LELGVV
Trigger: CACCACCCCGAGTTCTAATCACTCATTCCACACTGG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGTTTCCAGTGTGGAATaGGTGATTAGAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRVSSVE*VIRTRG
Trigger: ACCCCGAGTTCTAATCACTCATTCCACACTGGAAAC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTGGCCAGATGCTATCTaGCTGTTGTTTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSWPDAI*LLFLPG
Trigger: ACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTCCAGTTTGATGAGGTaGCAGAGCCAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWISSLMR*QSQQSP
Trigger: TGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGA...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTCCTCTCGGCATCGGTaGCATGCTGGCCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PLEYLFLMEAPESWFLRISSRHR*HAGPGN
Trigger: GTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGA...AATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR GCA 90 bp TTGGGAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCATTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LGISTSAMPYRGSTISFSFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...TGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp GAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTGGCTCTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: EAPESWFLRICELGSTWLFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...GAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGTTGTACATGTCTGCTaGAAGTTGATCCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSVVHVC*KLILAL
Trigger: CAGTGCAAGGATCAACTTGCAGCAGACATGTACAAC...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCAAAGTTGTACATGTCTaGTGCAAGTTGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLKVVHV*CKLILA
Trigger: TGCAAGGATCAACTTGCAGCAGACATGTACAACTTT...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTATGGACGGATGTGGCTaGTGCCATTTCAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFMDGCG*CHFSKC
Trigger: ACACTTGCTGAAATGGCAGCAGCCACATCCGTCCAT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGATGGGTTCAATCACTaGAACCACATGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLDGFNH*NHMDGC
Trigger: ACATCCGTCCATGTGGTTGCAGTGATTGAACCCATC...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGTTGTTTCTCCCTGGTaGTGGCACAGCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFVVSPW*WHSCRY
Trigger: GTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAAC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGGAAAGATGCTGCGATaGGGTTCTGAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLGKMLR*GSETLE
Trigger: TTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: RTASYSFQVAVGAARINSFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: ASYSFQVAVGAARINSRDFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGCGGTTCTGAAACCCTaGAATTGGAGTCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAAVLKP*NWSLLL
Trigger: TAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCTCCAACGAGGCGGCATaGGTCACATCCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFSNEAA*VTSSLM
Trigger: CATCAAACTGGATGTGACCCATGCCGCCTCGTTGGA...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCAGAGAGTCTTCCAGCTaGGTCGATGCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SNTNLASCFLCFWMLGISRESSS*VDASCI
Trigger: TATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCT...GGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR TCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTTTGATGGAAGCCCCTaGAAGTTGGTTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSFDGSP*KLVPED
Trigger: ATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTGTGGTGGCAACTTCTaGCATGTTCTCCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSCGGNF*HVLHKS
Trigger: AGACTTGTGGAGAACATGTCAGAAGTTGCCACCACA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTAGTCGGCATGCTGAATaGTGGGTTCAATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFSRHAE*WVQSLQ
Trigger: TTGCAGTGATTGAACCCATCATTCAGCATGCCGACT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTAACCAGTCGGCATGCTaGATGATGGGTTCAATCACT +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFNQSAC*MMGSIT
Trigger: AGTGATTGAACCCATCATTCAGCATGCCGACTGGTT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTATGCTGAGATGTTCCTaGAGAACTCTGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFMLRCS*RTLAPG
Trigger: CCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCAT...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp AAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGTCCTTTGTCCTCCACTaGAAGCTTTTCACTGTTCGG +
Preference number: 4 (lower is better)
Translates to: KGLSSQGSALGIIVYIQQSFVLH*KLFTVR
Trigger: CCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGA...CTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTGCTGCGATGCGGTTCTaGAACCCTGTTACTATCTTG +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIAAMRF*NPVTIL
Trigger: CAAGATAGTAACAGGGTTTCAGAACCGCATCGCAGC...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR GCA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPALTAGTKASYARFSRNFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTCCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGTCTCCACCTCAGCTATaGCGTACAGAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LPLEYLFLMEAPESWFLRSPPQL*RTEGPR
Trigger: TCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGA...CCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR GCA 90 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SNTNLASCFLCFWMLGISTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...GGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp CTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCAACCAATCTTGCAAGCTaGTTCCTCTGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LTPILQAASSASGCWESPTNLAS*FLCFWM
Trigger: CATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT...TGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCTTGATCCTGCACACTTaGAACTTGTGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLLILHT*NLCPFF
Trigger: GAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAA...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGATGGGTTCAATCACTaGAACCACATGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: KASYARFSRNTLSTPGTSDGFNH*NHMDGC
Trigger: ACATCCGTCCATGTGGTTGCAGTGATTGAACCCATC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGCTTTCTATTTAGAGTaGCACCCCGCCGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFAFYLE*HPAGGP
Trigger: AGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCLAESE*ISGKML
Trigger: CAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTTTTCACTGTTCGGTCTaGAAAGAAAGAGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SLLAESECISGKMLRCGSFHCSV*KERGSP
Trigger: AGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAA...AGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: YSFQVAVGAARINSRDKSDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SNTNLASCFLCFWMLGISSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTCTGCTTCTGGATGTTaGGAATCTCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSSASGC*ESPPQL
Trigger: TAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTTTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFLETSC*STSGVL
Trigger: CAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAGTCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQSLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGACT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCAGTCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QVAVGAARINSRDKSFLCSLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGACT...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCAGGCACGTCTTTGCTaGCTGAGTCTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIQARLC*LSLSAF
Trigger: AAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCAGGGTCCTTCGGTTTaGGAGGACTTTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSQGPSV*EDFPSS
Trigger: TGAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTG...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS-3UTR CCA 90 bp GGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATCTGAAACCCTGGAATTaGAGTCTTAGTCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLSSQGSALGIIVYIQQDLKPWN*SLSPGN
Trigger: GTTTCCAGGACTAAGACTCCAATTCCAGGGTTTCAG...ATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS-3UTR TCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTCTGGCCCTGGAAACATaGCACCAAGCGCTTATGGGA +
Preference number: 4 (lower is better)
Translates to: PLEYLFLMEAPESWFLRILALET*HQALMG
Trigger: TCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAG...AATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR GCA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LMEAPESWFLRICELGSTFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR GCA 90 bp AATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCAACAAATTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: NLHLSYAVQRVHDLLLNKFQLSR*FLHILS
Trigger: GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAA...TTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR GCA 90 bp CTTCCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPLEYLFLMEAPESWFLRSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...CCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR GCA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCAACAAAGACTTCGTaGTGGGAGAGCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFSTKTS*WESSRA
Trigger: GGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGA...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCGTTGTACATGTCTGCTaGAAGTTGATCCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: ALTAGTKASYARFSRNTLVVHVC*KLILAL
Trigger: CAGTGCAAGGATCAACTTGCAGCAGACATGTACAAC...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAAGTTGTACATGTCTaGTGCAAGTTGATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTKVVHV*CKLILA
Trigger: TGCAAGGATCAACTTGCAGCAGACATGTACAACTTT...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTTGATCCTGCACACTTaGAACTTGTGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTLILHT*NLCPFF
Trigger: GAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFLLGLV*ISGVAC
Trigger: GCAGGCCACGCCACTGATGCACACCAAACCCAATAG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGTTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSFQERC*DAVLKP
Trigger: GGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLAFQER*CDAVLK
Trigger: TTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCTATATCCAGCAGGATaGGGCCAGGCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFLYPAG*GQARLC
Trigger: GCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTACTCATTCCAAGTTaGTGTAGGTGCTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDLLIPS*CRCCPH
Trigger: ATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAA...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: LFLMEAPESWFLRICELGATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...ACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CCA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAACAAAATTTTGTGGTaGCAACTTCTGACATGTTCT +
Preference number: 4 (lower is better)
Translates to: VLPALTAGTKASYARFSRNKILW*QLLTCS
Trigger: AGAACATGTCAGAAGTTGCCACCACAAAATTTTGTT...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCCTGGCTATTGGGTTTaGTGTGCATCAGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFPGYWV*CASVAW
Trigger: CCACGCCACTGATGCACACCAAACCCAATAGCCAGG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTGAAACCCTGGAATTaGAGTCTGTTACTATCTTGG +
Preference number: 4 (lower is better)
Translates to: PALTAGTKASYARFSRNTLKPWN*SLLLSW
Trigger: CCAAGATAGTAACAGACTCCAATTCCAGGGTTTCAG...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTGAAACCCTGGAATTaGAGTCTGTTACTATCTTGG +
Preference number: 4 (lower is better)
Translates to: SFQVAVGAARINSRDKSFLKPWN*SLLLSW
Trigger: CCAAGATAGTAACAGACTCCAATTCCAGGGTTTCAG...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATGCGGTTCTGAAACCCTaGAATTGGAGTCTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDAVLKP*NWSLSP
Trigger: AGGACTAAGACTCCAATTCCAGGGTTTCAGAACCGC...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS-3UTR TCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATATGTCTGCTGCAAGTTaGTCCTTGCACTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDMSAAS*SLHCST
Trigger: AGTAGAACAGTGCAAGGATCAACTTGCAGCAGACAT...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCAGGTACAAATGCTTCTaGTACATTAAATTCCACCTC +
Preference number: 4 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLRYKCF*YIKFHL
Trigger: GAGGTGGAATTTAATGTATCAGAAGCATTTGTACCT...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp ATCCAGTTTGATGAGGTGACAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTAGGTACAAATGCTTCTaGTACATTAAATTCCACCTC +
Preference number: 4 (lower is better)
Translates to: IQFDEVTEPAVTIHGHGSRYKCF*YIKFHL
Trigger: GAGGTGGAATTTAATGTATCAGAAGCATTTGTACCT...AGAACCATGCCCATGGATGGTGACTGCTGGCTCTGTCACCTCATCAAACTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACTGCAAGTTGATCCTTaGACTGTTCTACTTTATTTC +
Preference number: 4 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQLQVDP*TVLLYF
Trigger: GAAATAAAGTAGAACAGTGCAAGGATCAACTTGCAG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACACTGCAAGTTGATCCTTaGACTGTTCTACTTTATTTC +
Preference number: 4 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTLQVDP*TVLLYF
Trigger: GAAATAAAGTAGAACAGTGCAAGGATCAACTTGCAG...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTGATCCTGCACACTTaGAACTTGTGTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCLILHT*NLCPFF
Trigger: GAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAA...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGACGGATGTGGCTGCTaGCATTTCAGCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFDGCGC*HFSKCS
Trigger: GGAACACTTGCTGAAATGGCAGCAGCCACATCCGTC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCAAAGCGGGGGATATGTaGTTTCTATTTAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTAGTKASYARFSRNTLSKAGDM*FLFRVP
Trigger: TGGCACTCTAAATAGAAAGCACATATCCCCCGCTTT...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR GCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTCTTCACAGGGCAGTaGTCTCGGTATCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDFFTGQ*SRYHCL
Trigger: TAGACAATGATACCGAGAGCACTGCCCTGTGAAGAA...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTCCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGAAGCGCTTATGGGAATaGTGGCATATTGACCGCACC +
Preference number: 4 (lower is better)
Translates to: LPLEYLFLMEAPESWFLRKRLWE*WHIDRT
Trigger: GGTGCGGTCAATATGCCACCATTCCCATAAGCGCTT...CCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CCA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATACCCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDTLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGGGT...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS-3UTR CCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCATCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCHLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGATG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR TCA 90 bp AGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTGGAATTGGAGTGACACAGACCATACATaGTACAAAATGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFQERCCDAVLKPWNWSDTDHT*YKMILQ
Trigger: CTGCAGAATCATTTTGTATCATGTATGGTCTGTGTC...ACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCTGCAAGTTGATCCTTaGACTGTTCTACTTTATTTC +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRLQVDP*TVLLYF
Trigger: GAAATAAAGTAGAACAGTGCAAGGATCAACTTGCAG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGACACAATCGCAATGTTaGTGGGAGTCATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRTQSQC*WESFYS
Trigger: TGAATAAAATGACTCCCAGCAACATTGCGATTGTGT...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGCCACCAAGCGCTTATaGGAATGGTGGCATATTGAC +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFATKRL*EWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGCTGAAACCCTGGAATTaGAGTCTGTTACTATCTTGG +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLLKPWN*SLLLSW
Trigger: CCAAGATAGTAACAGACTCCAATTCCAGGGTTTCAG...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTAACCAGTCGGCATGCTaGATGATGGGTTCAATCACT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFNQSAC*MMGSIT
Trigger: AGTGATTGAACCCATCATTCAGCATGCCGACTGGTT...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGTTTCCAGTGTGGAATaGGTGATTAGAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFVSSVE*VIRTRG
Trigger: ACCCCGAGTTCTAATCACTCATTCCACACTGGAAAC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTACACAATCGCAATGTTaGTGGGAGTCATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFTQSQC*WESFYS
Trigger: TGAATAAAATGACTCCCAGCAACATTGCGATTGTGT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTGACAAAAGCTTCCTATaGGCGTTTCAGCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFDKSFL*AFQQEY
Trigger: GTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTC...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLEYLFLMEAPESWFLRIEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...AATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTGAAGCCCCTGAAAGTTaGTTCCTGAGGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFEAPES*FLRICE
Trigger: CTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTC...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGAACAAAATTTTGTGGTaGCAACTTCTGACATGTTCT +
Preference number: 4 (lower is better)
Translates to: TASYSFQVAVGAARINSRNKILW*QLLTCS
Trigger: AGAACATGTCAGAAGTTGCCACCACAAAATTTTGTT...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCAATCGCAATGTTGCTaGGAGTCATTTTATTCACAT +
Preference number: 4 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCQSQCC*ESFYSH
Trigger: ATGTGAATAAAATGACTCCCAGCAACATTGCGATTG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCTGAAAGTTGGTTCCTaGGGATTTGTGAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFLKVGS*GFVSLV
Trigger: AACCAAGCTCACAAATCCTCAGGAACCAACTTTCAG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGCTGCAAGTTGATCCTTaGACTGTTCTACTTTATTTC +
Preference number: 4 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLLQVDP*TVLLYF
Trigger: GAAATAAAGTAGAACAGTGCAAGGATCAACTTGCAG...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR GCA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTACACAATCGCAATGTTaGTGGGAGTCATTTTATTCA +
Preference number: 4 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWITQSQC*WESFYS
Trigger: TGAATAAAATGACTCCCAGCAACATTGCGATTGTGT...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CCA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTAGTCTGTTACTATCTTaGAAGCTGTTGGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFSLLLS*KLLVLC
Trigger: ACACAGCACCAACAGCTTCCAAGATAGTAACAGACT...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR TCA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTAGGTACAAATGCTTCTaGTACATTAAATTCCACCTC +
Preference number: 4 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFRYKCF*YIKFHL
Trigger: GAGGTGGAATTTAATGTATCAGAAGCATTTGTACCT...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp GCTGCGGCGGTGGGTGATTGGGAGCTTGGATTGGAGACAAGCTGCTaGAGTACCTCCGGGGTGCTGAGAGCTGGGAGGGGGCGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: AAAVGDWELGLETSC*STSGVLRAGRGRRA
Trigger: AGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp CATGGGGTTGGGAGGGCCCTGGCTATTGGGTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGGCTGCGGCGGTGGGTGATTGGGAGC +
Preference number: 5 (lower is better)
Translates to: HGVGRALAIGFGVHQ*RGLRRGLRRWVIGS
Trigger: GCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: WWPPGSPWAVQKARSRTVGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...CACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS TCA 90 bp GTGTGCATCAGTGGCGTGGCCTGCGTAGGGGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGAGACAAGCTGCTGGAGTACCTCCGG +
Preference number: 5 (lower is better)
Translates to: VCISGVACVGGCGGG*LGAWIGDKLLEYLR
Trigger: CCGGAGGTACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SALVVASRFSLGRAEGQVWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp CCAGCGGGCACCACGGTGCTGCCATCTGTGGGCGGAAGTGGCGGCTaGAAAGCGGGGGATATGTGCTTTCTATTTAGAGTGCCACCCCGC +
Preference number: 5 (lower is better)
Translates to: PAGTTVLPSVGGSGG*KAGDMCFLFRVPPR
Trigger: GCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCGTGGTGCCCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SALVVASRFSLGRAEGQVASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SVCKERGSPAPAPLARVEASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS GCA 90 bp CTGCCATCTGTGGGCGGAAGTGGCGGCTGGAAAGCGGGGGATATGTaGTTTCTATTTAGAGTGCCACCCCGCCGGTGGGCCTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LPSVGGSGGWKAGDM*FLFRVPPRRWAWKS
Trigger: GGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAACAGGGTCCTTCGGTTaGGGAGGACTGCCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: SVCKERGSPAPAPLARVETGSFG*GGLPSP
Trigger: AGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTGT...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: AEGQVPHSEALLCPPLKARPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS TCA 90 bp TCACTGTCCAGCCCACACCACTCTCGGCTCTTCCGTGCTGCACGGTaGAGCACCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTC +
Preference number: 5 (lower is better)
Translates to: SLSSPHHSRLFRAAR*STHLSYAVQRVHDL
Trigger: GAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCTGGACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS CCA 90 bp TTTGGTGTGCATCAGTGGCGTGGCCTGCGTAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGATTGGAGACAAGCTGCTGGAGTACCT +
Preference number: 5 (lower is better)
Translates to: FGVHQWRGLRRGLRR*VIGSLDWRQAAGVP
Trigger: AGGTACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTTGCCTGGGGCTGATTTaGGCCAGATGCTATCTGACT +
Preference number: 5 (lower is better)
Translates to: VVASRFSLGRAEGQVPHSCLGLI*ARCYLT
Trigger: AGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCA...ACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GHSALVVASRFSLGRAEGRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PGSPWAVQKARSRTVRPSSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...GGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTTCAGCTTCTTTAACTaGGAGGCCCCAGCCCCAATT +
Preference number: 5 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLFSFFN*EAPAPI
Trigger: AATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTGCCTGGGGCTGATTTaGGCCAGATGCTATCTGACT +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVCLGLI*ARCYLT
Trigger: AGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: TVRSAKKEVRLPLLHSPGPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: SALVVASRFSLGRAEGQVGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...GACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: HCSVCKERGSPAPAPLARGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: VVEGWERAFFTGQCSRYHGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...ATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
CDS-3UTR CAA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: VVEGWERAFFTGQCSRYHRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...ATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp ATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ISSRMRPGTSLLAESECIASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...AATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS GCA 90 bp GCCAGATGCTATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTGCCGTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARCYLTVVSPWCWHS*RYRVLRFGRTAVAW
Trigger: CCAGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS GCA 90 bp TTAACACTCACTGTCCAGCCCACACCACTCTCGGCTCTTCCGTGCTaGACGGTGAAGCACCCACCTCAGCTATGCCGTACAGAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: LTLTVQPTPLSALPC*TVKHPPQLCRTEGP
Trigger: TGGACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCTGGACAGTGAGTGTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS CCA 90 bp GCATCGGTGCCATGCTGGCCCTGGAAACATGCCACCAAGCGCTTATaGGAATGGTGGCATATTGACCGCACCGTGTCCAGGCGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ASVPCWPWKHATKRL*EWWHIDRTVSRRLS
Trigger: TGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000571575.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672271.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTTCAGCTTCTTTAACTaGGAGGCCCCAGCCCCAATT +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVFSFFN*EAPAPI
Trigger: AATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAA...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCTGCAGCATTGTGAGGTaGGCCCATGGAGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GHSALVVASRFSLGRAEGCSIVR*AHGELV
Trigger: CACCAGCTCTCCATGGGCCAACCTCACAATGCTGCA...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QVAVGAARINSRDKSFLCWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ASYSFQVAVGAARINSRDWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTTGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: ISSRMRPGTSLLAESECIRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...AATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp TGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACGAGTCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WAVQKARSRTVRPSFVLHESVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGACTC...GTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS TCA 90 bp CACAGGGTCCCTTGCGAGAGGCCTCATCAGCTCTTAGAAGCCAAGTaGAGCCTTTGTGACCCCAGAGGGCAGCTGAGTAGCACAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HRVPCERPHQLLEAK*SLCDPRGQLSSTAL
Trigger: CAAGGCTGTGCTACTCAGCTGCCCTCTGGGGTCACAAAGGCTTCACTTGGCTTCTAAGAGCTGATGAGGCCTCTCGCAAGGGACCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS GCA 90 bp CGGTCCACATGTGTTAAAACCACACATGGGGATAGCCACCCAAGCTaGCCGGCATGCAGTGAAGCGGCAAGGACCAGACTAATGGCCACC +
Preference number: 5 (lower is better)
Translates to: RSTCVKTTHGDSHPS*PACSEAARTRLMAT
Trigger: GGTGGCCATTAGTCTGGTCCTTGCCGCTTCACTGCATGCCGGGCAGCTTGGGTGGCTATCCCCATGTGTGGTTTTAACACATGTGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS-3UTR CAA 90 bp TCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGCCAGCGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: STISFSTKTSCWESSRASGNGGI*TAPCPG
Trigger: GCCTGGACACGGTGCGGTCAATATGCCACCATTCCC...GCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: SVCKERGSPAPAPLARVEVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAATGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SVCKERGSPAPAPLARVEWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGATGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FGLQRKRFACPCSTRQGGWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...TCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: VLPALTAGTKASYARFSRAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTGAGTCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLESVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGACTC...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ASYSFQVAVGAARINSRDASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGGCATCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPASVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGATGC...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS TCA 90 bp CAAACTATGGACCAGGCTGGGGCGGTTACTTGTGGAACAGAAGCCTaGGCGTACCTAGATGGCACCAACTCAGGCTGCCCAGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: QTMDQAGAVTCGTEA*AYLDGTNSGCPEAA
Trigger: TGCAGCTTCTGGGCAGCCTGAGTTGGTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp GATGGCCAACGTGAACTCTCCACGTTGCAGTTACTCTCCATCAGATaGGACATCTCCGCGGCATGCAGTGCTTCAGAACACCGCATCCCC +
Preference number: 5 (lower is better)
Translates to: DGQRELSTLQLLSIR*DISAACSASEHRIP
Trigger: GGGGATGCGGTGTTCTGAAGCACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGAGAGTTCACGTTGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp CTCTCGGCTCTTCCGTGCTGCACGGTGAAGCACCCACCTCAGCTATaGCGTACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGT +
Preference number: 5 (lower is better)
Translates to: LSALPCCTVKHPPQL*RTEGPRSPSQQRLR
Trigger: ACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS GCA 90 bp ATTTTAACACTCACTGTCCAGCCCACACCACTCTCGGCTCTTCCGTaGTGCACGGTGAAGCACCCACCTCAGCTATGCCGTACAGAGGGT +
Preference number: 5 (lower is better)
Translates to: ILTLTVQPTPLSALP*CTVKHPPQLCRTEG
Trigger: ACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCTGGACAGTGAGTGTTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS CCA 90 bp GTGCCATGCTGGCCCTGGAAACATGCCACCAAGCGCTTATGGGAATaGTGGCATATTGACCGCACCGTGTCCAGGCGTCTCTCAATCTGT +
Preference number: 5 (lower is better)
Translates to: VPCWPWKHATKRLWE*WHIDRTVSRRLSIC
Trigger: ACAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp CAGAGTGGGCCAGGGGAAGAGAGGATGACAGAGCCTAGGGCGAAATaGACAGAACCCAGGCACTGGATGGAAGAGAGGAAGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: QSGPGEERMTEPRAK*TEPRHWMEERKEKR
Trigger: CCTTTTCTCCTTCCTCTCTTCCATCCAGTGCCTGGGTTCTGTCCATTTCGCCCTAGGCTCTGTCATCCTCTCTTCCCCTGGCCCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GHSALVVASRFSLGRAEGLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: VLPALTAGTKASYARFSRPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: RTASYSFQVAVGAARINSGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: SVSLSISSRMRPGTSLLAAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...AGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QVAVGAARINSRDKSFLCRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: ALVVASRFSLGRAEGQVPQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...CGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS TCA 90 bp GCCCTGGAAACATGCCACCAAGCGCTTATGGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCGTCTCTCAATCTGACAAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ALETCHQALMGMVAY*PHRVQASLNLTRQR
Trigger: TCTCTGCCTTGTCAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571575.5
ENST00000672271.1
CDS GCA 90 bp AGCATTGTGAGGTTGGCCCATGGAGAGCTGGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCCAGATGCTATCTGACTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: SIVRLAHGELVGASS*LGLILARCYLTVVS
Trigger: AGAAACAACAGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp TCTACTGGAGCAGCAAACTATGGACCAGGCTGGGGCGGTTACTTGTaGAACAGAAGCCTGAGCGTACCTAGATGGCACCAACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: STGAANYGPGWGGYL*NRSLSVPRWHQLRL
Trigger: CAGCCTGAGTTGGTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTGCTGCTCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNGNGGI*TAPCPG
Trigger: GCCTGGACACGGTGCGGTCAATATGCCACCATTCCC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTAGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KLLPLLLDVGNLHLSYAVGNGGI*TAPCPG
Trigger: GCCTGGACACGGTGCGGTCAATATGCCACCATTCCC...TACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp TTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: FSLGRAEGQVPHSEALLCLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...ACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTCGTGCTGGGAGAGCTCGAGAGCCAGCTGATTCTCAGCATCTCCACACGTCTCTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LRAGRAREPADSQHLHTSLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...AGACGTGTGGAGATGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTGGCCAGGAGGTGGGTaGCCCGGTTTCGGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIWPGGG*PGFGGA
Trigger: AGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCA...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGGATTGGGAGCTTGGATaGGAGACAAGCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: RSFSFSGGLQVLLGPCRRDWELG*ETSCWS
Trigger: ACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATC...CCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGACACAGGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCTGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RHRSFSFSGGLQVLLGPCWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...GCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: ASYARFSRNTLSTPGTSLGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...CAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PPLKAFHCSVCKERGSPAAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTCTGAAACCCTGGAATaGGAGTCTGTTACTATCTTG +
Preference number: 5 (lower is better)
Translates to: RFSLGRAEGQVPHSEALLSETLE*ESVTIL
Trigger: CAAGATAGTAACAGACTCCAATTCCAGGGTTTCAGA...AAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLSSQGSALGIIVYIQQDRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...ATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp TCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGTGGAAGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SVCKERGSPAPAPLARVEVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...TTCCACCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LTAGTKASYARFSRNTLSASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGGCATCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: HCSVCKERGSPAPAPLARASVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGATGC...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS TCA 90 bp TCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGAGAGCCAGCTaGTTCTCAGCATCTCCACACGTCTCCAGCATCCCAGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: SFSTKTSCWESSRAS*FSASPHVSSIPGES
Trigger: ACTCTCTCCTGGGATGCTGGAGACGTGTGGAGATGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS GCA 90 bp TCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGGCTGAGTCTGAGTaGATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTGTTA +
Preference number: 5 (lower is better)
Translates to: SSRMRPGTSLLAESE*ISGKMLRCGSETLL
Trigger: TAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS GCA 90 bp GTTGTCCTGTGCATTGTAGGTGTCACCCAACAGATGCCAGTGACATaGAGCCTCCTCCCCCAGTGTGACAACCGAAAGTGTCTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: VVLCIVGVTQQMPVT*SLLPQCDNRKCLLY
Trigger: GTACAGGAGACACTTTCGGTTGTCACACTGGGGGAGGAGGCTGCATGTCACTGGCATCTGTTGGGTGACACCTACAATGCACAGGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CCA 90 bp CCATGCTGGCCCTGGAAACATGCCACCAAGCGCTTATGGGAATGGTaGCATATTGACCGCACCGTGTCCAGGCGTCTCTCAATCTGTAAT +
Preference number: 5 (lower is better)
Translates to: PCWPWKHATKRLWEW*HIDRTVSRRLSICN
Trigger: ATTACAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRGNGGI*TAPCPG
Trigger: GCCTGGACACGGTGCGGTCAATATGCCACCATTCCC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGGNGGI*TAPCPG
Trigger: GCCTGGACACGGTGCGGTCAATATGCCACCATTCCC...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp CCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: PAVTIHGHGSEGTGETQTLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...GGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGCTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VLPALTAGTKASYARFSRLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: GRAEGQVPHSEALLCPPLLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...CAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTCCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCAACACAATCGCAATGTaGCTGGGAGTCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: SPWAVQKARSRTVRPSFVNTIAM*LGVILF
Trigger: GAATAAAATGACTCCCAGCAACATTGCGATTGTGTT...GACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCTGCAGCATTGTGAGGTaGGCCCATGGAGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QVAVGAARINSRDKSFLCCSIVR*AHGELV
Trigger: CACCAGCTCTCCATGGGCCAACCTCACAATGCTGCA...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGTGCAGCATTGTGAGGTaGGCCCATGGAGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQCSIVR*AHGELV
Trigger: CACCAGCTCTCCATGGGCCAACCTCACAATGCTGCA...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: QVAVGAARINSRDKSFLCGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: ASYSFQVAVGAARINSRDGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCGGCAATGCCATGGGGTaGGGAGGGCCCTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: LTAGTKASYARFSRNTLSGNAMG*GGPWLL
Trigger: CAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCC...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: SFQVAVGAARINSRDKSFAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PALTAGTKASYARFSRNTAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: KGLSSQGSALGIIVYIQQRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...CTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp TTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCCAGGTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: FSFSGGLQVLLGPCRRPGVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...ACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTGCCTCCAGGTTCTCCTaGGGCCGTGCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIASRFS*GRAEGQ
Trigger: CTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGC...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: HCSVCKERGSPAPAPLARQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: AEGQVPHSEALLCPPLKAQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTTGGGCCGTGCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCTCTGAAACCCTGGAATaGGAGTCATTAAATATTCCA +
Preference number: 5 (lower is better)
Translates to: PWAVQKARSRTVRPSFVLSETLE*ESLNIP
Trigger: TGGAATATTTAATGACTCCAATTCCAGGGTTTCAGA...GAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS GCA 90 bp GCCAGATGCTATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTTTCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ARCYLTVVSPWCWHS*RYRVLRFGRTFLLH
Trigger: GTGAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS GCA 90 bp AAGCCCAACCCTGTAATGCTAAGGGGCGGGCATGCTTCAAACCTCTaGTGGAACTTTCTAGTAAACACTGGACAGAGTGTACCCCACCCC +
Preference number: 5 (lower is better)
Translates to: KPNPVMLRGGHASNL*WNFLVNTGQSVPHP
Trigger: GGGGTGGGGTACACTCTGTCCAGTGTTTACTAGAAAGTTCCAGCAGAGGTTTGAAGCATGCCCGCCCCTTAGCATTACAGGGTTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp AGGTTAAATACGTGTCTCCTCTCGGCATCGGTGCCATGCTGGCCCTaGAAACATGCCACCAAGCGCTTATGGGAATGGTGGCATATTGAC +
Preference number: 5 (lower is better)
Translates to: RLNTCLLSASVPCWP*KHATKRLWEWWHID
Trigger: GTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGAGACACGTATTTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS CCA 90 bp AAAGCGGGGGATATGTGCTTTCTATTTAGAGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGCTTCACACCAAAGCTACACAGAGAG +
Preference number: 5 (lower is better)
Translates to: KAGDMCFLFRVPPRR*AWKSISFTPKLHRE
Trigger: CTCTCTGTGTAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS-3UTR CAA 90 bp ACAGAGGGTCCACGATCTCCTTCTCAACAAAGACTTCGTGCTGGGAGAGCTCGACTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TEGPRSPSQQRLRAGRARLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...TCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp CAGAGCCAGCAGTCACCATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACTCTTTGGCCATAAAGTaGTACATGTCTGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: QSQQSPSMGMVLRGLGRHSLAIK*YMSAAS
Trigger: ACTTGCAGCAGACATGTACAACTTTATGGCCAAAGA...GTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAATTCCGCCCACTTATCTaGATGGGCTCGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQFRPLI*MGSHFG
Trigger: CCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGAA...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGACAGGGTCCTTCGGTTaGGGAGGACTGCCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLTGSFG*GGLPSP
Trigger: AGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTGT...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289968.11
ENST00000673560.1
CDS-3UTR CAA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAATGCAGCATTGTGAGGTaGGCCCATGGAGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKCSIVR*AHGELV
Trigger: CACCAGCTCTCCATGGGCCAACCTCACAATGCTGCA...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACGATTGGGAGCTTGGATaGGAGACAAGCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: KLFTVRSAKKEVRLPLLHDWELG*ETSCWS
Trigger: ACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATC...GTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PALTAGTKASYARFSRNTPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QKLPMRVSAGILSPLQVLAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...AAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGCCGGTTCCTTGGCTTaGGTACTGGTCTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: KGLSSQGSALGIIVYIQQAGSLA*VLVSVS
Trigger: CGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGC...CTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCAGAAGGCCAGGTCCCGCACAGTGAGGCCCTCCTTTGTCCTCCACTGAAAGCTTCTGAAACCCTGGAATaGGAGTCTGTTACTATCTTG +
Preference number: 5 (lower is better)
Translates to: AEGQVPHSEALLCPPLKASETLE*ESVTIL
Trigger: CAAGATAGTAACAGACTCCAATTCCAGGGTTTCAGA...AGCTTTCAGTGGAGGACAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCGGCCAGGCACGTCTTaGCTGGCTGAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIRPGTS*LAESEC
Trigger: GCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VVEGWERAFFTGQCSRYHVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...ATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673465.1
CDS TCA 90 bp CCGACCCCAACGCTGCCCGGTCACCCTCTCGTTTATTTCAACGTATaGAAAGCTGTTTCTAGCAGGGCGCAGTGGTTCAACGTTGTAATC +
Preference number: 5 (lower is better)
Translates to: PTPTLPGHPLVYFNV*KAVSSRAQWFNVVI
Trigger: GATTACAACGTTGAACCACTGCGCCCTGCTAGAAACAGCTTTTCATACGTTGAAATAAACGAGAGGGTGACCGGGCAGCGTTGGGGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573449.5
ENST00000672600.1
CDS GCA 90 bp GCCAGATGCTATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTAAGAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: ARCYLTVVSPWCWHS*RYRVLRFGRTKRSK
Trigger: TTTACTCCTCTTAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS GCA 90 bp GTTGCAGTTACTCTCCATCAGATGCGACATCTCCGCGGCATGCAGTaGTTCAGAACACCGCATCCCCAAACAGCTCCGAAAAATTCTGAG +
Preference number: 5 (lower is better)
Translates to: VAVTLHQMRHLRGMQ*FRTPHPQTAPKNSE
Trigger: CTCAGAATTTTTCGGAGCTGTTTGGGGATGCGGTGTTCTGAAGCACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp TCCACGTTGCAGTTACTCTCCATCAGATGCGACATCTCCGCGGCATaGAGTGCTTCAGAACACCGCATCCCCAAACAGCTCCGAAAAATT +
Preference number: 5 (lower is better)
Translates to: STLQLLSIRCDISAA*SASEHRIPKQLRKI
Trigger: AATTTTTCGGAGCTGTTTGGGGATGCGGTGTTCTGAAGCACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp ATCTGTCATACAAGACTGGAGATGGCCAACGTGAACTCTCCACGTTaGAGTTACTCTCCATCAGATGCGACATCTCCGCGGCATGCAGTG +
Preference number: 5 (lower is better)
Translates to: ICHTRLEMANVNSPR*SYSPSDATSPRHAV
Trigger: CACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGAGAGTTCACGTTGGCCATCTCCAGTCTTGTATGACAGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp AAAGCGGGGGATATGTGCTTTCTATTTAGAGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGCTTCACACCAAAGCTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KAGDMCFLFRVPPRR*AWKSISFTPKLSFF
Trigger: GAAGAAGGAAAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000672083.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VLPALTAGTKASYARFSRSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...CCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCCATGTCTGCTGCAAGTaGATCCTTGCACTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLHVCCK*ILALFY
Trigger: GTAGAACAGTGCAAGGATCAACTTGCAGCAGACATG...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GGTCATTCAGCTTTAGTGGTGGCCTCCAGGTTCTCCTTGGGCCGTGCAGAAGGCTCTTTGGCCATAAAGTaGTACATGTCTGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: GHSALVVASRFSLGRAEGSLAIK*YMSAAS
Trigger: ACTTGCAGCAGACATGTACAACTTTATGGCCAAAGA...GCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGATTGGGAGCTTGGATaGGAGACAAGCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQDWELG*ETSCWS
Trigger: ACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATGATTGGGAGCTTGGATaGGAGACAAGCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNDWELG*ETSCWS
Trigger: ACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATC...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: KASYARFSRNTLSTPGTSGGPWL*GLVCIS
Trigger: ACTGATGCACACCAAACCCAATAGCCAGGGCCCTCC...AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGACAGGGTCCTTCGGTTaGGGAGGACTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQTGSFG*GGLSFF
Trigger: GAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTGT...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS-3UTR CAA 90 bp TGGTGGAGGGCTGGGAAAGGGCTTTCTTCACAGGGCAGTGCTCTCGGTATCATTAACCCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WWRAGKGLSSQGSALGIINPVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGGGTT...AATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS TCA 90 bp CTCTCCAGGGTCCCCGAGTCAGAGTCGTTTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTGAGAGGTACAAATGCTTCTGATACA +
Preference number: 5 (lower is better)
Translates to: LSRVPESESFPVWNE*LELGVVRGTNASDT
Trigger: TGTATCAGAAGCATTTGTACCTCTCACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGACCCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000575412.1
ENST00000672083.1
ENST00000673196.1
ENST00000673307.1
ENST00000673560.1
CDS GCA 90 bp TTGCCTTCACCACAAGCCCAACCCTGTAATGCTAAGGGGCGGGCATaGTTCAAACCTCTGCTGGAACTTTCTAGTAAACACTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: LPSPQAQPCNAKGRA*FKPLLELSSKHWTE
Trigger: CTCTGTCCAGTGTTTACTAGAAAGTTCCAGCAGAGGTTTGAAGCATGCCCGCCCCTTAGCATTACAGGGTTGGGCTTGTGGTGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp CACCGCATCCCCAAACAGCTCCGAAAAATTCTGAGTGGAAAGAAATaGAGCATCTGCAGCCCTAAAGCAGCTGAAGGCTATGCTGATGGC +
Preference number: 5 (lower is better)
Translates to: HRIPKQLRKILSGKK*SICSPKAAEGYADG
Trigger: GCCATCAGCATAGCCTTCAGCTGCTTTAGGGCTGCAGATGCTGCATTTCTTTCCACTCAGAATTTTTCGGAGCTGTTTGGGGATGCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp GCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCTTAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: ARLCWLSLSAFQERC*DAVLKPWNWSLSPG
Trigger: TCCAGGACTAAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS GCA 90 bp CAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGGAATTGGAGTCTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: QARLCWLSLSAFQER*CDAVLKPWNWSLSP
Trigger: AGGACTAAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS GCA 90 bp CAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGGAATTGGAGTCTGGACAAA +
Preference number: 5 (lower is better)
Translates to: QARLCWLSLSAFQER*CDAVLKPWNWSLDK
Trigger: TTTGTCCAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CCA 90 bp GCTCTGCTGTTAGAAAGCTGGGTTGGAAGAAGGCAGTATGTACTCTaGTGTGTCCTCTTACACTCTCTCCCATGTCACAGCAGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: ALLLESWVGRRQYVL*CVLLHSLPCHSRGR
Trigger: TCTACCCCTGCTGTGACATGGGAGAGAGTGTAAGAGGACACACCAGAGTACATACTGCCTTCTTCCAACCCAGCTTTCTAACAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: LMEAPESWFLRICELGSTVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CAA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: NTNLASCFLCFWMLGISTVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CAA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGACTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp GCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: AASSASGCWESPPQLCRTSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...TGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp CACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCGCCAGGTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: HCSVCKERGSPAPAPLARLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...CCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTTCCGCCCACTTATCTaGATGGGCTCGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: ALTAGTKASYARFSRNTLFRPLI*MGSHFG
Trigger: CCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGAA...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTTGCCTGGGGCTGATTTaGGCCAGATGCTATCTGACT +
Preference number: 5 (lower is better)
Translates to: PALTAGTKASYARFSRNTCLGLI*ARCYLT
Trigger: AGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCA...AGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGTGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PLSSTESFSLFGLQRKRFPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...GAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTCGCTGGGCCGGTTCCTaGGCTTTGGTACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFRWAGS*ALVLVS
Trigger: CGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCG...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VGAARINSRDKSFLCAFQVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGACAGGGTCCTTCGGTTaGGGAGGACTTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRTGSFG*GGLSFF
Trigger: GAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTGT...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS TCA 90 bp TTGAATTTGGCCTGCCTGTGCAAGCTGCAGAGATCTAGTGCTATCTaGGCAGCTCGCAGAAGCAAAGGAGGGCAAACCAGTTGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: LNLACLCKLQRSSAI*AARRSKGGQTSCEN
Trigger: GTTTTCACAACTGGTTTGCCCTCCTTTGCTTCTGCGAGCTGCTCAGATAGCACTAGATCTCTGCAGCTTGCACAGGCAGGCCAAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp CAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGGAATTGGAGTCTGTTACTA +
Preference number: 5 (lower is better)
Translates to: QARLCWLSLSAFQER*CDAVLKPWNWSLLL
Trigger: TAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 90 bp CAGGCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGTTACTATCTTGGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QARLCWLSLSAFQER*CDAVLKPCYYLGSC
Trigger: ACAGCTTCCAAGATAGTAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS GCA 90 bp CAGGCACTGGCCTCTCAAACAACAGACCTACTATGTGTCAGGTACTaGAGGAGGCATGTAAAGTTAACAGAGACTCCCTACCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: QALASQTTDLLCVRY*RRHVKLTETPYPQE
Trigger: TTCCTGAGGGTAGGGAGTCTCTGTTAACTTTACATGCCTCCTGCAGTACCTGACACATAGTAGGTCTGTTGTTTGAGAGGCCAGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 90 bp GCACCAGCAACATTTGGGCCTGAATTATTTGTTGTGGTTGTCCTGTaGATTGTAGGTGTCACCCAACAGATGCCAGTGACATGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: APATFGPELFVVVVL*IVGVTQQMPVTCSL
Trigger: GAGGCTGCATGTCACTGGCATCTGTTGGGTGACACCTACAATGCACAGGACAACCACAACAAATAATTCAGGCCCAAATGTTGCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS GCA 90 bp GAGCCCGGAGCAGCCCTTGGAGATGCAGCTTTTAAAGGATTTGCTTaGTTTGATGGAGGAAAGGAAGCCTCATTCTTCCCAAGACCTCTA +
Preference number: 5 (lower is better)
Translates to: EPGAALGDAAFKGFA*FDGGKEASFFPRPL
Trigger: TAGAGGTCTTGGGAAGAATGAGGCTTCCTTTCCTCCATCAAAGCAAGCAAATCCTTTAAAAGCTGCATCTCCAAGGGCTGCTCCGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS GCA 90 bp GCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCTGGACAAAAAC +
Preference number: 5 (lower is better)
Translates to: ARLCWLSLSAFQERC*DAVLKPWNWSLDKN
Trigger: GTTTTTGTCCAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CCA 90 bp ACTGGCCATTGGTCCCTTAGCAGCTCTGCTGTTAGAAAGCTGGGTTaGAAGAAGGCAGTATGTACTCTGGTGTGTCCTCTTACACTCTCT +
Preference number: 5 (lower is better)
Translates to: TGHWSLSSSAVRKLG*KKAVCTLVCPLTLS
Trigger: AGAGAGTGTAAGAGGACACACCAGAGTACATACTGCCTTCTTCCAACCCAGCTTTCTAACAGCAGAGCTGCTAAGGGACCAATGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp CCTTTACTGGCCATTGGTCCCTTAGCAGCTCTGCTGTTAGAAAGCTaGGTTGGAAGAAGGCAGTATGTACTCTGGTGTGTCCTCTTACAC +
Preference number: 5 (lower is better)
Translates to: PLLAIGPLAALLLES*VGRRQYVLWCVLLH
Trigger: GTGTAAGAGGACACACCAGAGTACATACTGCCTTCTTCCAACCCAGCTTTCTAACAGCAGAGCTGCTAAGGGACCAATGGCCAGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp ACAACAGGAAGGGTTCATGTCCTTCTCTGCACCTTTACTGGCCATTaGTCCCTTAGCAGCTCTGCTGTTAGAAAGCTGGGTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TTGRVHVLLCTFTGH*SLSSSAVRKLGWKK
Trigger: CTTCTTCCAACCCAGCTTTCTAACAGCAGAGCTGCTAAGGGACCAATGGCCAGTAAAGGTGCAGAGAAGGACATGAACCCTTCCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp GTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: VGAARINSRDKSFLCAFQCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...CTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTCCAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LQHLPQERVFQLSRCFLHCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...ATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp TTGGGAATCTCCACCTCAGCTATGCCGTACAGAGGGTCCACGATCTCCTTCTCACTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: LGISTSAMPYRGSTISFSLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...TGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp CTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LTPILQAASSASGCWESPLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...TGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp TGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTATGCCGTACAGAAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: CFLCFWMLGISTSAMPYRSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...TCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAACATGTCTGCTGCAAGTaGATCCTTGCACTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQHVCCK*ILALFY
Trigger: GTAGAACAGTGCAAGGATCAACTTGCAGCAGACATG...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTGCCTGGGGCTGATTTaGGCCAGATGCTATCTGACT +
Preference number: 5 (lower is better)
Translates to: ALTAGTKASYARFSRNTLCLGLI*ARCYLT
Trigger: AGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCA...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTTGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFWVIGS*DWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCA...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QGQKLPMRVSAGILSPLQVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...CTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCTTCACAGGGCAGTGCTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: SSQGSALGIIVYIQQDAAQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...GGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571406.1
ENST00000571843.1
ENST00000673130.1
ENST00000673465.1
CDS-3UTR CAA 90 bp CTCTCGGTATCATTGTCTATATCCAGCAGGATGCGGCCAGGCACGTCTTTGCTGACATCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LSVSLSISSRMRPGTSLLTSVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGATGT...CAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS TCA 90 bp ATCAGTCATGGGTGGATGGCGACCACTCTCAAATCCCAAGTCCACTaGGCGATACCAGATACCACGGGTCTAACAACATATTTACTGCTG +
Preference number: 5 (lower is better)
Translates to: ISHGWMATTLKSQVH*AIPDTTGLTTYLLL
Trigger: CAGCAGTAAATATGTTGTTAGACCCGTGGTATCTGGTATCGCTCAGTGGACTTGGGATTTGAGAGTGGTCGCCATCCACCCATGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS GCA 90 bp GCACGTCTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCTGTTACTATCT +
Preference number: 5 (lower is better)
Translates to: ARLCWLSLSAFQERC*DAVLKPWNWSLLLS
Trigger: AGATAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 90 bp CTTCACACCAAAGCTACACAGAGAGAAGAAACAGTCAACACACCATaGGAGCAGACTACTGAGACAGAAGCCCATCGGTCCACATGTGTT +
Preference number: 5 (lower is better)
Translates to: LHTKATQREETVNTP*EQTTETEAHRSTCV
Trigger: AACACATGTGGACCGATGGGCTTCTGTCTCAGTAGTCTGCTCGCATGGTGTGTTGACTGTTTCTTCTCTCTGTGTAGCTTTGGTGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS CCA 90 bp AGCAGAATTCCAGAAACTATCTGGACACCATCAGTCATGGGTGGATaGCGACCACTCTCAAATCCCAAGTCCACTGAGCGATACCAGATA +
Preference number: 5 (lower is better)
Translates to: SRIPETIWTPSVMGG*RPLSNPKSTERYQI
Trigger: TATCTGGTATCGCTCAGTGGACTTGGGATTTGAGAGTGGTCGCCATCCACCCATGACTGATGGTGTCCAGATAGTTTCTGGAATTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTGTCAGAGGCAGTTTTTaGTGTCTCCTCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWIVRGSF*CLLSAS
Trigger: CGATGCCGAGAGGAGACACAAAAAACTGCCTCTGAC...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: PPLKAFHCSVCKERGSPACFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...GGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCAGCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: PILQAASSASGCWESPPQLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...CTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp ACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGCATGTCTGCTGCAAGTaGATCCTTGCACTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: TASYSFQVAVGAARINSRHVCCK*ILALFY
Trigger: GTAGAACAGTGCAAGGATCAACTTGCAGCAGACATG...CCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTCAGCTTCTTTAACTaGGAGGCCCCAGCCCCAATT +
Preference number: 5 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCFSFFN*EAPAPI
Trigger: AATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAA...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATCTGCACACTTGCAACTaGTGTCCATTCTTCATACAG +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNLHTCN*CPFFIQ
Trigger: CTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAG...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCTTGATCCTGCACACTaGCAACTTGTGTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: RTASYSFQVAVGAARINSLDPAH*QLVSIL
Trigger: AAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCCTTGATCCTGCACACTaGCAACTTGTGTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: QVAVGAARINSRDKSFLCLDPAH*QLVSIL
Trigger: AAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAG...GCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGGATTGGGAGCTTGGATaGGAGACAAGCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSDWELG*ETSCWS
Trigger: ACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATC...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000573765.1
ENST00000672412.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFPWLLG*VCISGV
Trigger: CACGCCACTGATGCACACCAAACCCAATAGCCAGGG...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CGCACTGCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: RTASYSFQVAVGAARINSQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...GCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCACATCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLTSVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGATGT...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS TCA 90 bp ACAGTTGGAGTGGGAAGAGGACTGGTTTGCTTTTTGAGTTTAAGGTaGGTGCTGTTCATCAAAGGGAACCGATGCTTAGGAGGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TVGVGRGLVCFLSLR*VLFIKGNRCLGGCK
Trigger: CTTGCAGCCTCCTAAGCATCGGTTCCCTTTGATGAACAGCACTCACCTTAAACTCAAAAAGCAAACCAGTCCTCTTCCCACTCCAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp AGATTAGTGCTTGGAATGACCTACAGCAGAATTCCAGAAACTATCTaGACACCATCAGTCATGGGTGGATGGCGACCACTCTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: RLVLGMTYSRIPETI*TPSVMGGWRPLSNP
Trigger: GGGATTTGAGAGTGGTCGCCATCCACCCATGACTGATGGTGTCCAGATAGTTTCTGGAATTCTGCTGTAGGTCATTCCAAGCACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS-3UTR CAA 90 bp TACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: YSFQVAVGAARINSRDKSCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...GCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGATGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp CAGCATCTTCCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTTGCATATTTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: QHLPQERVFQLSRCFLHICFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...AATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS-3UTR CAA 90 bp AACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTGCTTCTTGCATATTTaGAGCAAGAGCTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NTNLASCFLCFWMLGISTCFLHI*SKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCA...GGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SFQVAVGAARINSRDKSFLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTCCACCCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: LMEAPESWFLRICELGSTLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...GGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp TCCCAGTCTAACACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGACTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SQSNTNLASCFLCFWMLGLSRCF*HILSKS
Trigger: GCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAG...TCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571480.5
ENST00000573625.5
ENST00000671803.1
ENST00000672878.1
CDS-3UTR CAA 90 bp GCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGCCTGCCCCTGCTCCACTCTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: AFHCSVCKERGSPAPAPLLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...GAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTCATGTCTGCTGCAAGTaGATCCTTGCACTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCHVCCK*ILALFY
Trigger: GTAGAACAGTGCAAGGATCAACTTGCAGCAGACATG...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTTCCGCCCACTTATCTaGATGGGCTCGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFFRPLI*MGSHFG
Trigger: CCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGAA...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAACTGCACACTTGCAACTaGTGTCCATTCTTCATACAG +
Preference number: 5 (lower is better)
Translates to: HGHGSEGTGETQTIHDTKLHTCN*CPFFIQ
Trigger: CTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAG...TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGAGTCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFESVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGACTC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCTTCTTACTCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACTCTGAAACCCTGGAATaGGAGTCTGTTACTATCTTG +
Preference number: 5 (lower is better)
Translates to: ASYSFQVAVGAARINSRDSETLE*ESVTIL
Trigger: CAAGATAGTAACAGACTCCAATTCCAGGGTTTCAGA...GTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGAGTAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LPMRVSAGILSPLQVLLCVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...ACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: SFQVAVGAARINSRDKSFQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS TCA 90 bp CACATCTTTGTGAGGGGCAATCAGCTGAGAAAAGATCAGGAATTGTaGGTCTGGGAATTTACATCTTATCCCAAGTTCACGCCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: HIFVRGNQLRKDQEL*VWEFTSYPKFTPRP
Trigger: CGGCCTTGGCGTGAACTTGGGATAAGATGTAAATTCCCAGACTCACAATTCCTGATCTTTTCTCAGCTGATTGCCCCTCACAAAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 90 bp TGCTATCTGAGCAGCTCGCAGAAGCAAAGGAGGGCAAACCAGTTGTaGAAACTGCTCCAGGGAGAAACACTTAAATCTTTCCAACAACAG +
Preference number: 5 (lower is better)
Translates to: CYLSSSQKQRRANQL*KLLQGETLKSFQQQ
Trigger: CTGTTGTTGGAAAGATTTAAGTGTTTCTCCCTGGAGCAGTTTTCACAACTGGTTTGCCCTCCTTTGCTTCTGCGAGCTGCTCAGATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp CTGAGTGCATTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTaGAATTGGAGTCTGGACAAAAACACGAGGAGACATGGTATCAAT +
Preference number: 5 (lower is better)
Translates to: LSAFQERCCDAVLKP*NWSLDKNTRRHGIN
Trigger: ATTGATACCATGTCTCCTCGTGTTTTTGTCCAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWISLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAAACGTAACAAAGAATTaGCCATACTCCCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SMGMVLRGLGRHRPYMIQNVTKN*PYSPSL
Trigger: CAAAGAAGGGGAGTATGGCAAATTCTTTGTTACGTT...TTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp ATCCATGGGCATGGTTCTGAGGGGACTGGGGAGACACAGACCATACATGATACAAACGTAACAAAGAATTaGCCATACTCCCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: IHGHGSEGTGETQTIHDTNVTKN*PYSPSL
Trigger: CAAAGAAGGGGAGTATGGCAAATTCTTTGTTACGTT...TGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCAACGTAACAAAGAATTaGCCATACTCCCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QQGQKLPMRVSAGILSPLNVTKN*PYSPSL
Trigger: CAAAGAAGGGGAGTATGGCAAATTCTTTGTTACGTT...GAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCCTTGATCCTGCACACTaGCAACTTGTGTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: LTAGTKASYARFSRNTLSLDPAH*QLVSIL
Trigger: AAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAG...GGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGAGTCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLESVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGACTC...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: ALTAGTKASYARFSRNTLQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...GAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS TCA 90 bp GAATGGTGGCATATTGACCGCACCGTGTCCAGGCGTCTCTCAATCTaGCAAGGCAGAGACAAAAGAGAACAAATTCATCCTCTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: EWWHIDRTVSRRLSI*QGRDKREQIHPLSF
Trigger: AAAAGAAAGAGGATGAATTTGTTCTCTTTTGTCTCTGCCTTGTCAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571575.5
ENST00000672271.1
CDS-3UTR CAA 90 bp CGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCTCTGCTTCTGGATGTaGGGAATCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RFSRNTLSTPGTSLFWIFLCFWM*GISTSA
Trigger: AGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAG...AAAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTGCCCGCATTAACAGCAGGGACAAAAGCTTCCTATGCGCGTTTCAGCAGGAATTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: LPALTAGTKASYARFSRNLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...ATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TCATTCCAAGTTGCTGTAGGTGCTGCCCGCATTAACAGCAGGGACAAAAGCTTCAACGTAACAAAGAATTaGCCATACTCCCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SFQVAVGAARINSRDKSFNVTKN*PYSPSL
Trigger: CAAAGAAGGGGAGTATGGCAAATTCTTTGTTACGTT...GAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACAGCAACTTGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTTCAGCTTCTTTAACTaGGAGGCCCCAGCCCCAATT +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFFSFFN*EAPAPI
Trigger: AATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAA...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATCTGCACACTTGCAACTaGTGTCCATTCTTCATACAG +
Preference number: 5 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDLHTCN*CPFFIQ
Trigger: CTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAG...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTCTTGATCCTGCACACTaGCAACTTGTGTCCATTCTT +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWILDPAH*QLVSIL
Trigger: AAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAG...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp TGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATCAGAGAGTAGGCGACTaGCATAATGAGCGCATTTTA +
Preference number: 5 (lower is better)
Translates to: CAFQQEYSLHSRYFFVLDQRVGD*HNERIL
Trigger: TAAAATGCGCTCATTATGCAAGTCGCCTACTCTCTG...ATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS TCA 90 bp AATACTTTGTCCCTTTTATCTAAAGCAATAAGTTACAACACAGGCTaGAAATGGCCACGTGAGCCTTCCACTAGGGGATGCCCTGGAATC +
Preference number: 5 (lower is better)
Translates to: NTLSLLSKAISYNTG*KWPREPSTRGCPGI
Trigger: GATTCCAGGGCATCCCCTAGTGGAAGGCTCACGTGGCCATTTTCAGCCTGTGTTGTAACTTATTGCTTTAGATAAAAGGGACAAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 90 bp CCAGATACCACGGGTCTAACAACATATTTACTGCTGGTTTGGAAGTaGACGGTCAAATCATACCTTTCCTTCTTCACCAAGTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PDTTGLTTYLLLVWK*TVKSYLSFFTKSPS
Trigger: GGAAGGAGACTTGGTGAAGAAGGAAAGGTATGATTTGACCGTTCACTTCCAAACCAGCAGTAAATATGTTGTTAGACCCGTGGTATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS GCA 90 bp TCTGCCACTCCAGTATCATCAGAGAGACCATTTCAAAGCAACCAATaGGGAGTTTTCAGTTCTACTGCGTTTGGACTTAAATTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SATPVSSERPFQSNQ*GVFSSTAFGLKLGS
Trigger: ACTGCCCAATTTAAGTCCAAACGCAGTAGAACTGAAAACTCCGCATTGGTTGCTTTGAAATGGTCTCTCTGATGATACTGGAGTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS CCA 90 bp CGGGACTATAGGACTATTTATTTTATGAGATTCGTTGCATCAGACTaGACTCCAACGACTCTGCCACTCCAGTATCATCAGAGAGACCAT +
Preference number: 5 (lower is better)
Translates to: RDYRTIYFMRFVASD*TPTTLPLQYHQRDH
Trigger: ATGGTCTCTCTGATGATACTGGAGTGGCAGAGTCGTTGGAGTCCAGTCTGATGCAACGAATCTCATAAAATAAATAGTCCTATAGTCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS CCA 90 bp AGAGAACAGAGGTGCAAGGACTGGACCTCAGAAAAGGCTGACTTCTaGGGTGGAGACAGAAATGAGCAATATATAATCCTTCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: REQRCKDWTSEKADF*GGDRNEQYIILLEE
Trigger: TTCTTCAAGAAGGATTATATATTGCTCATTTCTGTCTCCACCCCAGAAGTCAGCCTTTTCTGAGGTCCAGTCCTTGCACCTCTGTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 90 bp AATGAGATATGGCTGTTTGCGACTTCTGGTGTAGACCATAAATGCTaGCACAATTCAAGAGGCAAAGTGTTTGCCATTGGCTTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: NEIWLFATSGVDHKC*HNSRGKVFAIGFSC
Trigger: ACAGCTGAAGCCAATGGCAAACACTTTGCCTCTTGAATTGTGCCAGCATTTATGGTCTACACCAGAAGTCGCAAACAGCCATATCTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp CTTCCTTTAGAGTATCTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGAGTCTAACACCAATCTaGCAAGCTGCTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPLEYLFLMEAPESWFLRSLTPI*QAASSA
Trigger: AGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACT...CCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CAA 90 bp ACCAATCTTGCAAGCTGCTTCCTCTGCTTCTGGATGTTGGGAATCTCCACCTCATTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: TNLASCFLCFWMLGISTSLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...TGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CAA 90 bp GCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTCTTTGGCCATAAAGTaGTACATGTCTGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: ARFSRNTLSTPGTSLFWISLAIK*YMSAAS
Trigger: ACTTGCAGCAGACATGTACAACTTTATGGCCAAAGA...AATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp AGCTTCCTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTAACACAATCGCAATGTaGCTGGGAGTCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: SFLCAFQQEYSLHSRYFFNTIAM*LGVILF
Trigger: GAATAAAATGACTCCCAGCAACATTGCGATTGTGTT...AAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTTTGTCCTCCACTGAAAGCTTTTCACTGTTCGGTCTGCAAAGAAAGAGGTTCGTCTGAAACCCTGGAATaGGAGTCTGTTACTATCTTG +
Preference number: 5 (lower is better)
Translates to: LCPPLKAFHCSVCKERGSSETLE*ESVTIL
Trigger: CAAGATAGTAACAGACTCCAATTCCAGGGTTTCAGA...CGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTGTGCTCTCGGTATCATaGTCTATATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFVLSVS*SISSRM
Trigger: CATCCTGCTGGATATAGACAATGATACCGAGAGCAC...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000571406.1
ENST00000571843.1
ENST00000573765.1
ENST00000672412.1
ENST00000673130.1
ENST00000673196.1
ENST00000673465.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTAACCCTGTTACTATCTaGGAAGCTGTTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFNPVTI*EAVGAV
Trigger: CACAGCACCAACAGCTTCCAAGATAGTAACAGGGTT...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS GCA 90 bp TTTAATGAGATATGGCTGTTTGCGACTTCTGGTGTAGACCATAAATaGTGGCACAATTCAAGAGGCAAAGTGTTTGCCATTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FNEIWLFATSGVDHK*WHNSRGKVFAIGFS
Trigger: GCTGAAGCCAATGGCAAACACTTTGCCTCTTGAATTGTGCCAGCATTTATGGTCTACACCAGAAGTCGCAAACAGCCATATCTCATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS-3UTR CAA 90 bp CTATGCGCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGAACACAATCGCAATGTaGCTGGGAGTCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: LCAFQQEYSLHSRYFFVLNTIAM*LGVILF
Trigger: GAATAAAATGACTCCCAGCAACATTGCGATTGTGTT...CAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTTCTTTGGCCATAAAGTaGTACATGTCTGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFSLAIK*YMSAAS
Trigger: ACTTGCAGCAGACATGTACAACTTTATGGCCAAAGA...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS-3UTR CAA 90 bp CTATTTTTGATGGAAGCCCCTGAAAGTTGGTTCCTGAGGATTTGTGAGCTTGGTTTAGAGTATCTATTTTaGATGGAAGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: LFLMEAPESWFLRICELGLEYLF*MEAPES
Trigger: ACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAA...ACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS-3UTR CAA 90 bp GCGTTTCAGCAGGAATACTCTCTCCACTCCAGGTACTTCTTTGTTTTGGATTTTAACACAATCGCAATGTaGCTGGGAGTCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: AFQQEYSLHSRYFFVLDFNTIAM*LGVILF
Trigger: GAATAAAATGACTCCCAGCAACATTGCGATTGTGTT...AAAATCCAAAACAAAGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000673196.1
ENST00000673560.1
CDS CCA 90 bp GCAACCAATGCGGAGTTTTCAGTTCTACTGCGTTTGGACTTAAATTaGGCAGTACTTAATACCATGAAATGGCTTTTACATGTTGACATA +
Preference number: 5 (lower is better)
Translates to: ATNAEFSVLLRLDLN*AVLNTMKWLLHVDI
Trigger: TATGTCAACATGTAAAAGCCATTTCATGGTATTAAGTACTGCCCAATTTAAGTCCAAACGCAGTAGAACTGAAAACTCCGCATTGGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS GCA 72 bp GGTTTGGGAGGACTGCCGTCGCCTGGGCTCGGCCCCTaGTCCAGTATGCCCGCGGAAGAGGGGACAGTCCCA +
Preference number: 6 (lower is better)
Translates to: GLGGLPSPGLGP*SSMPAEEGTVP
Trigger: TGGGACTGTCCCCTCTTCCGCGGGCATACTGGAGCAGGGGCCGAGCCCAGGCGACGGCAGTCCTCCCAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS CCA 72 bp GGGAGGGCCCTGGCTATTGGGTTTGGTGTGCATCAGTaGCGTGGCCTGCGTAGGGGGCTGCGGCGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: GRALAIGFGVHQ*RGLRRGLRRWV
Trigger: CACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS TCA 72 bp CGGCGCAGTGTATGCGGGCTGGGCCCTGCAGCATTGTaGGGTTGGCCCATGGAGAGCTGGTGGGAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RRSVCGLGPAAL*GWPMESWWEPA
Trigger: TGCTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCATACACTGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp ATGGGGTTGGGAGGGCCCTGGCTATTGGGTTTGGTGTaGATCAGTGGCGTGGCCTGCGTAGGGGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: MGLGGPWLLGLV*ISGVACVGGCG
Trigger: GCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000571843.1
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 90 bp TCACTGGGCAATGCCATGGGGTTGGGAGGGCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTGGCCTGCGTAGGGGGCTGCGGCGGT +
Preference number: 6 (lower is better)
Translates to: SLGNAMGLGGPWLLG*VCISGVACVGGCGG
Trigger: ACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000571843.1
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS TCA 72 bp AGTGGCGTGGCCTGCGTAGGGGGCTGCGGCGGTGGGTaGTTGGGAGCTTGGATTGGAGACAAGCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SGVACVGGCGGG*LGAWIGDKLLE
Trigger: CTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 72 bp CTGCGTAGGGGGCTGCGGCGGTGGGTGATTGGGAGCTaGGATTGGAGACAAGCTGCTGGAGTACCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: LRRGLRRWVIGS*DWRQAAGVPPG
Trigger: CCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp GTGGGCGGAAGTGGCGGCTGGAAAGCGGGGGATATGTaGTTTCTATTTAGAGTGCCACCCCGCCGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: VGGSGGWKAGDM*FLFRVPPRRWA
Trigger: GGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS CCA 72 bp CATCAGTGGCGTGGCCTGCGTAGGGGGCTGCGGCGGTaGGTGATTGGGAGCTTGGATTGGAGACAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: HQWRGLRRGLRR*VIGSLDWRQAA
Trigger: AGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 72 bp AATGCCATGGGGTTGGGAGGGCCCTGGCTATTGGGTTaGGTGTGCATCAGTGGCGTGGCCTGCGTAGGGGGC +
Preference number: 6 (lower is better)
Translates to: NAMGLGGPWLLG*VCISGVACVGG
Trigger: GCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000571843.1
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS TCA 72 bp AGCCCACACCACTCTCGGCTCTTCCGTGCTGCACGGTaGAGCACCCACCTCAGCTATGCCGTACAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SPHHSRLFRAAR*STHLSYAVQRV
Trigger: GACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS GCA 72 bp CTCACTGTCCAGCCCACACCACTCTCGGCTCTTCCGTaGTGCACGGTGAAGCACCCACCTCAGCTATGCCGT +
Preference number: 6 (lower is better)
Translates to: LTVQPTPLSALP*CTVKHPPQLCR
Trigger: ACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCTGGACAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS CCA 72 bp TGCTCACTGGGCAATGCCATGGGGTTGGGAGGGCCCTaGCTATTGGGTTTGGTGTGCATCAGTGGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: CSLGNAMGLGGP*LLGLVCISGVA
Trigger: GGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000571843.1
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 72 bp CTGGGCAATGCCATGGGGTTGGGAGGGCCCTGGCTATaGGGTTTGGTGTGCATCAGTGGCGTGGCCTGCGTA +
Preference number: 6 (lower is better)
Translates to: LGNAMGLGGPWL*GLVCISGVACV
Trigger: TACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000571843.1
ENST00000572314.5
ENST00000573765.1
ENST00000575283.5
ENST00000672083.1
ENST00000672412.1
ENST00000672814.1
ENST00000673012.1
ENST00000673130.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp ACTGTCCAGCCCACACCACTCTCGGCTCTTCCGTGCTaGACGGTGAAGCACCCACCTCAGCTATGCCGTACA +
Preference number: 6 (lower is better)
Translates to: TVQPTPLSALPC*TVKHPPQLCRT
Trigger: TGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAGAGCCGAGAGTGGTGTGGGCTGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS GCA 72 bp AGTAGCACAGCCTTGCCTCTGGGCTCCGACGTTGCTTaGTATGAGCCCGGAGCAGCCCTTGGAGATGCAGCT +
Preference number: 6 (lower is better)
Translates to: SSTALPLGSDVA*YEPGAALGDAA
Trigger: AGCTGCATCTCCAAGGGCTGCTCCGGGCTCATAGCAAGCAACGTCGGAGCCCAGAGGCAAGGCTGTGCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS GCA 72 bp ACCACACATGGGGATAGCCACCCAAGCTGCCCGGCATaGAGTGAAGCGGCAAGGACCAGACTAATGGCCACC +
Preference number: 6 (lower is better)
Translates to: TTHGDSHPSCPA*SEAARTRLMAT
Trigger: GGTGGCCATTAGTCTGGTCCTTGCCGCTTCACTGCATGCCGGGCAGCTTGGGTGGCTATCCCCATGTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS CCA 72 bp AGCGGGCACCACGGTGCTGCCATCTGTGGGCGGAAGTaGCGGCTGGAAAGCGGGGGATATGTGCTTTCTATT +
Preference number: 6 (lower is better)
Translates to: SGHHGAAICGRK*RLESGGYVLSI
Trigger: AATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCGTGGTGCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS TCA 72 bp GACCAGGCTGGGGCGGTTACTTGTGGAACAGAAGCCTaGGCGTACCTAGATGGCACCAACTCAGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: DQAGAVTCGTEA*AYLDGTNSGCP
Trigger: TGGGCAGCCTGAGTTGGTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp AGGTTGGCCCATGGAGAGCTGGTGGGAGCCAGCAGCTaGCTGGGGCTGATTTTGGCCAGATGCTATCTGACT +
Preference number: 6 (lower is better)
Translates to: RLAHGELVGASS*LGLILARCYLT
Trigger: AGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 72 bp TGGCCCTGGAAACATGCCACCAAGCGCTTATGGGAATaGTGGCATATTGACCGCACCGTGTCCAGGCGTCTC +
Preference number: 6 (lower is better)
Translates to: WPWKHATKRLWE*WHIDRTVSRRL
Trigger: GAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000571575.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672271.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 72 bp CCATGCTGGCCCTGGAAACATGCCACCAAGCGCTTATaGGAATGGTGGCATATTGACCGCACCGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PCWPWKHATKRL*EWWHIDRTVSR
Trigger: CCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000571575.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672271.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 90 bp GAGAGGCTGGGAAGTTTCAGGGTCAGCCCATGCACACAGGGTCCCTaGCGAGAGGCCTCATCAGCTCTTAGAAGCCAAGTGAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: ERLGSFRVSPCTQGP*REASSALRSQVKPL
Trigger: CAAAGGCTTCACTTGGCTTCTAAGAGCTGATGAGGCCTCTCGCAAGGGACCCTGTGTGCATGGGCTGACCCTGAAACTTCCCAGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CAA 90 bp GGCCCTGGAAACATGCCACCAAGCGCTTATGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGCGTCTCTCAATCTGACAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: GPGNMPPSAYGNGGI*TAPCPGVSQSDKAE
Trigger: CTCTGCCTTGTCAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571575.5
ENST00000672271.1
CDS TCA 72 bp GCTGCCGAGTGTCCCCTGGGGAATCACAATCACTGCTaGCTGACATCACTGAGGCAGACCAAGTCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: AAECPLGNHNHC*LTSLRQTKSPA
Trigger: TGCAGGAGACTTGGTCTGCCTCAGTGATGTCAGTCAGCAGTGATTGTGATTCCCCAGGGGACACTCGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS GCA 72 bp CTTCCGTGCTGCACGGTGAAGCACCCACCTCAGCTATaGCGTACAGAGGGTCCACGATCTCCTTCTCAACAA +
Preference number: 6 (lower is better)
Translates to: LPCCTVKHPPQL*RTEGPRSPSQQ
Trigger: TTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGGTGCTTCACCGTGCAGCACGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575447.1
ENST00000671797.1
CDS CCA 72 bp CCCTGGAAACATGCCACCAAGCGCTTATGGGAATGGTaGCATATTGACCGCACCGTGTCCAGGCGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: PWKHATKRLWEW*HIDRTVSRRLS
Trigger: TGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000571575.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672271.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 72 bp ACCACGGTGCTGCCATCTGTGGGCGGAAGTGGCGGCTaGAAAGCGGGGGATATGTGCTTTCTATTTAGAGTG +
Preference number: 6 (lower is better)
Translates to: TTVLPSVGGSGG*KAGDMCFLFRV
Trigger: CACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS CCA 72 bp CCAGGGGAAGAGAGGATGACAGAGCCTAGGGCGAAATaGACAGAACCCAGGCACTGGATGGAAGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: PGEERMTEPRAK*TEPRHWMEERK
Trigger: CTTCCTCTCTTCCATCCAGTGCCTGGGTTCTGTCCATTTCGCCCTAGGCTCTGTCATCCTCTCTTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 72 bp GGAGCAGCAAACTATGGACCAGGCTGGGGCGGTTACTaGTGGAACAGAAGCCTGAGCGTACCTAGATGGCAC +
Preference number: 6 (lower is better)
Translates to: GAANYGPGWGGY*WNRSLSVPRWH
Trigger: GTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTGCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 90 bp CCATCTACTGGAGCAGCAAACTATGGACCAGGCTGGGGCGGTTACTaGTGGAACAGAAGCCTGAGCGTACCTAGATGGCACCAACTCAGG +
Preference number: 6 (lower is better)
Translates to: PSTGAANYGPGWGGY*WNRSLSVPRWHQLR
Trigger: CCTGAGTTGGTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTGCTGCTCCAGTAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp GCCTGCCTGTGCAAGCTGCAGAGATCTAGTGCTATCTaGGCAGCTCGCAGAAGCAAAGGAGGGCAAACCAGT +
Preference number: 6 (lower is better)
Translates to: ACLCKLQRSSAI*AARRSKGGQTS
Trigger: ACTGGTTTGCCCTCCTTTGCTTCTGCGAGCTGCTCAGATAGCACTAGATCTCTGCAGCTTGCACAGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp TATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTGCC +
Preference number: 6 (lower is better)
Translates to: YLTVVSPWCWHS*RYRVLRFGRTA
Trigger: GGCAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673560.1
CDS GCA 72 bp AGGTTAAATACGTGTCTCCTCTCGGCATCGGTGCCATaGTGGCCCTGGAAACATGCCACCAAGCGCTTATGG +
Preference number: 6 (lower is better)
Translates to: RLNTCLLSASVP*WPWKHATKRLW
Trigger: CCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGAGACACGTATTTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573625.5
ENST00000671803.1
CDS GCA 72 bp ACTCTCCATCAGATGCGACATCTCCGCGGCATGCAGTaGTTCAGAACACCGCATCCCCAAACAGCTCCGAAA +
Preference number: 6 (lower is better)
Translates to: TLHQMRHLRGMQ*FRTPHPQTAPK
Trigger: TTTCGGAGCTGTTTGGGGATGCGGTGTTCTGAAGCACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp CAGTTACTCTCCATCAGATGCGACATCTCCGCGGCATaGAGTGCTTCAGAACACCGCATCCCCAAACAGCTC +
Preference number: 6 (lower is better)
Translates to: QLLSIRCDISAA*SASEHRIPKQL
Trigger: GAGCTGTTTGGGGATGCGGTGTTCTGAAGCACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp TGTGTTAAAACCACACATGGGGATAGCCACCCAAGCTaGCCGGCATGCAGTGAAGCGGCAAGGACCAGACTA +
Preference number: 6 (lower is better)
Translates to: CVKTTHGDSHPS*PACSEAARTRL
Trigger: TAGTCTGGTCCTTGCCGCTTCACTGCATGCCGGGCAGCTTGGGTGGCTATCCCCATGTGTGGTTTTAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS CCA 72 bp GCAGCAAACTATGGACCAGGCTGGGGCGGTTACTTGTaGAACAGAAGCCTGAGCGTACCTAGATGGCACCAA +
Preference number: 6 (lower is better)
Translates to: AANYGPGWGGYL*NRSLSVPRWHQ
Trigger: TTGGTGCCATCTAGGTACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp GAATTTACATCTTATCCCAAGTTCACGCCAAGGCCGTaGGAGCATGGAGCAGAGTGGGCCAGGGGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: EFTSYPKFTPRP*EHGAEWARGRE
Trigger: CTCTCTTCCCCTGGCCCACTCTGCTCCATGCTCTCACGGCCTTGGCGTGAACTTGGGATAAGATGTAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp TGGCCACCCCTGAGCAACTCCACTCGGCTTCAAGCCTaGGCAAAGCCAATGAACCTGGTACTGTTCAATGTC +
Preference number: 6 (lower is better)
Translates to: WPPLSNSTRLQA*AKPMNLVLFNV
Trigger: GACATTGAACAGTACCAGGTTCATTGGCTTTGCTCAGGCTTGAAGCCGAGTGGAGTTGCTCAGGGGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS TCA 72 bp ACATGCCACCAAGCGCTTATGGGAATGGTGGCATATTaGCCGCACCGTGTCCAGGCGTCTCTCAATCTGACA +
Preference number: 6 (lower is better)
Translates to: TCHQALMGMVAY*PHRVQASLNLT
Trigger: TGTCAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571575.5
ENST00000672271.1
CDS GCA 72 bp ACAAGACTGGAGATGGCCAACGTGAACTCTCCACGTTaGAGTTACTCTCCATCAGATGCGACATCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: TRLEMANVNSPR*SYSPSDATSPR
Trigger: CCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGAGAGTTCACGTTGGCCATCTCCAGTCTTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp TGCATTGTAGGTGTCACCCAACAGATGCCAGTGACATaGAGCCTCCTCCCCCAGTGTGACAACCGAAAGTGT +
Preference number: 6 (lower is better)
Translates to: CIVGVTQQMPVT*SLLPQCDNRKC
Trigger: ACACTTTCGGTTGTCACACTGGGGGAGGAGGCTGCATGTCACTGGCATCTGTTGGGTGACACCTACAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CCA 72 bp TTGCCATCTACTGGAGCAGCAAACTATGGACCAGGCTaGGGCGGTTACTTGTGGAACAGAAGCCTGAGCGTA +
Preference number: 6 (lower is better)
Translates to: LPSTGAANYGPG*GGYLWNRSLSV
Trigger: TACGCTCAGGCTTCTGTTCCACAAGTAACCGCCCCAGCCTGGTCCATAGTTTGCTGCTCCAGTAGATGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 72 bp GAGTCTGTTACTATCTTGGAAGCTGTTGGTGCTGTGTaGGTGAGGCTGCTGTCCCCAGCTGAGTGGACACCA +
Preference number: 6 (lower is better)
Translates to: ESVTILEAVGAV*VRLLSPAEWTP
Trigger: TGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTAACAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 72 bp AACCCTGTTACTATCTTGGAAGCTGTTGGTGCTGTGTaGGTGAGGCTGCTGTCCCCAGCTGAGTGGACACCA +
Preference number: 6 (lower is better)
Translates to: NPVTILEAVGAV*VRLLSPAEWTP
Trigger: TGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTAACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS CAA 72 bp GCATCTGTTACTATCTTGGAAGCTGTTGGTGCTGTGTaGGTGAGGCTGCTGTCCCCAGCTGAGTGGACACCA +
Preference number: 6 (lower is better)
Translates to: ASVTILEAVGAV*VRLLSPAEWTP
Trigger: TGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTAACAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS CAA 72 bp AACATGCCACCAAGCGCTTATGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGCGTCTCTCAATCTGAC +
Preference number: 6 (lower is better)
Translates to: NMPPSAYGNGGI*TAPCPGVSQSD
Trigger: GTCAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571575.5
ENST00000672271.1
CDS TCA 72 bp CAGGGTCCCCGAGTCAGAGTCGTTTCCAGTGTGGAATaGGTGATTAGAACTCGGGGTGGTGAGAGGTACAAA +
Preference number: 6 (lower is better)
Translates to: QGPRVRVVSSVE*VIRTRGGERYK
Trigger: TTTGTACCTCTCACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000575412.1
ENST00000672083.1
ENST00000673196.1
ENST00000673307.1
ENST00000673560.1
CDS GCA 72 bp GAACCAGTCGGCATGCTGAATGATGGGTTCAATCACTaGAACCACATGGACGGATGTGGCTGCTGCCATTTC +
Preference number: 6 (lower is better)
Translates to: EPVGMLNDGFNH*NHMDGCGCCHF
Trigger: GAAATGGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAACCCATCATTCAGCATGCCGACTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000672083.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp TATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTTTC +
Preference number: 6 (lower is better)
Translates to: YLTVVSPWCWHS*RYRVLRFGRTF
Trigger: GAAAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303665.9
ENST00000673196.1
CDS GCA 72 bp TATCTGACTGTTGTTTCTCCCTGGTGCTGGCACAGCTaGAGATACAGGGTCCTTCGGTTTGGGAGGACTAAG +
Preference number: 6 (lower is better)
Translates to: YLTVVSPWCWHS*RYRVLRFGRTK
Trigger: CTTAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS CCA 72 bp CCAGAAACTATCTGGACACCATCAGTCATGGGTGGATaGCGACCACTCTCAAATCCCAAGTCCACTGAGCGA +
Preference number: 6 (lower is better)
Translates to: PETIWTPSVMGG*RPLSNPKSTER
Trigger: TCGCTCAGTGGACTTGGGATTTGAGAGTGGTCGCCATCCACCCATGACTGATGGTGTCCAGATAGTTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS CAA 72 bp AACATGCCACCAAGCGCTTATGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGCGTCTCTCAATCTGTA +
Preference number: 6 (lower is better)
Translates to: NMPPSAYGNGGI*TAPCPGVSQSV
Trigger: TACAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 72 bp TACAAGACTGGAGATGGCCAACGTGAACTCTCCACGTaGCAGTTACTCTCCATCAGATGCGACATCTCCGCG +
Preference number: 6 (lower is better)
Translates to: YKTGDGQRELST*QLLSIRCDISA
Trigger: CGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGAGAGTTCACGTTGGCCATCTCCAGTCTTGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 72 bp ACATCTGTTACTATCTTGGAAGCTGTTGGTGCTGTGTaGGTGAGGCTGCTGTCCCCAGCTGAGTGGACACCA +
Preference number: 6 (lower is better)
Translates to: TSVTILEAVGAV*VRLLSPAEWTP
Trigger: TGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTAACAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1
CDS CAA 90 bp GGCCCTGGAAACATGCCACCAAGCGCTTATGGGAATGGTGGCATATaGACCGCACCGTGTCCAGGCGTCTCTCAATCTGTAATAGATCTT +
Preference number: 6 (lower is better)
Translates to: GPGNMPPSAYGNGGI*TAPCPGVSQSVIDL
Trigger: AAGATCTATTACAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000455311.6
ENST00000571480.5
ENST00000573449.5
ENST00000573625.5
ENST00000575447.1
ENST00000575975.5
ENST00000671797.1
ENST00000671803.1
ENST00000672038.1
ENST00000672375.1
ENST00000672600.1
ENST00000672878.1
ENST00000673196.1
ENST00000673560.1
CDS CAA 90 bp TATCTGTCATACAAGACTGGAGATGGCCAACGTGAACTCTCCACGTaGCAGTTACTCTCCATCAGATGCGACATCTCCGCGGCATGCAGT +
Preference number: 6 (lower is better)
Translates to: YLSYKTGDGQRELST*QLLSIRCDISAACS
Trigger: ACTGCATGCCGCGGAGATGTCGCATCTGATGGAGAGTAACTGCAACGTGGAGAGTTCACGTTGGCCATCTCCAGTCTTGTATGACAGATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp GTCCCCGAGTCAGAGTCGTTTCCAGTGTGGAATGAGTaGTTAGAACTCGGGGTGGTGAGAGGTACAAATGCT +
Preference number: 6 (lower is better)
Translates to: VPESESFPVWNE*LELGVVRGTNA
Trigger: AGCATTTGTACCTCTCACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000575412.1
ENST00000672083.1
ENST00000673196.1
ENST00000673307.1
ENST00000673560.1
CDS TCA 72 bp GGGTGGATGGCGACCACTCTCAAATCCCAAGTCCACTaGGCGATACCAGATACCACGGGTCTAACAACATAT +
Preference number: 6 (lower is better)
Translates to: GWMATTLKSQVH*AIPDTTGLTTY
Trigger: ATATGTTGTTAGACCCGTGGTATCTGGTATCGCTCAGTGGACTTGGGATTTGAGAGTGGTCGCCATCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS TCA 72 bp ACGCTGCCCGGTCACCCTCTCGTTTATTTCAACGTATaGAAAGCTGTTTCTAGCAGGGCGCAGTGGTTCAAC +
Preference number: 6 (lower is better)
Translates to: TLPGHPLVYFNV*KAVSSRAQWFN
Trigger: GTTGAACCACTGCGCCCTGCTAGAAACAGCTTTTCATACGTTGAAATAAACGAGAGGGTGACCGGGCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573449.5
ENST00000672600.1
CDS GCA 72 bp GGGTTCAATCACTGCAACCACATGGACGGATGTGGCTaGTGCCATTTCAGCAAGTGTTCCTTCATTTCTGGC +
Preference number: 6 (lower is better)
Translates to: GFNHCNHMDGCG*CHFSKCSFISG
Trigger: GCCAGAAATGAAGGAACACTTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000672083.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp TGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: CWLSLSAFQERC*DAVLKPWNWSL
Trigger: CAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000573703.1
ENST00000575283.5
ENST00000672083.1
ENST00000672740.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS GCA 72 bp CCAGCATCCCAGGAGAGAGTCTTCCAGCTGAGTCGATaGTTCTTGCATATTTTGAGCAAGAGCTGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PASQERVFQLSR*FLHILSKSCQR
Trigger: CCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS CCA 72 bp GATATGTGCTTTCTATTTAGAGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGCTTCACACCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: DMCFLFRVPPRR*AWKSISFTPKL
Trigger: AAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289968.11
ENST00000572314.5
ENST00000672083.1
ENST00000673560.1
CDS CCA 72 bp AGGGTTCATGTCCTTCTCTGCACCTTTACTGGCCATTaGTCCCTTAGCAGCTCTGCTGTTAGAAAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: RVHVLLCTFTGH*SLSSSAVRKLG
Trigger: ACCCAGCTTTCTAACAGCAGAGCTGCTAAGGGACCAATGGCCAGTAAAGGTGCAGAGAAGGACATGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp GATATGTGCTTTCTATTTAGAGTGCCACCCCGCCGGTaGGCCTGGAAGTCCATAAGCTTCACACCAAAGCTA +
Preference number: 6 (lower is better)
Translates to: DMCFLFRVPPRR*AWKSISFTPKL
Trigger: TAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS GCA 72 bp TGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGGAATTGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: CWLSLSAFQERC*DAVLKPWNWSL
Trigger: AAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS GCA 72 bp AAAGCTACACAGAGAGAAGAAACAGTCAACACACCATaGGAGCAGACTACTGAGACAGAAGCCCATCGGTCC +
Preference number: 6 (lower is better)
Translates to: KATQREETVNTP*EQTTETEAHRS
Trigger: GGACCGATGGGCTTCTGTCTCAGTAGTCTGCTCGCATGGTGTGTTGACTGTTTCTTCTCTCTGTGTAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS CCA 72 bp GTAATGCTAAGGGGCGGGCATGCTTCAAACCTCTGCTaGAACTTTCTAGTAAACACTGGACAGAGTGTACCC +
Preference number: 6 (lower is better)
Translates to: VMLRGGHASNLC*NFLVNTGQSVP
Trigger: GGGTACACTCTGTCCAGTGTTTACTAGAAAGTTCCAGCAGAGGTTTGAAGCATGCCCGCCCCTTAGCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp TGGTCCCTTAGCAGCTCTGCTGTTAGAAAGCTGGGTTaGAAGAAGGCAGTATGTACTCTGGTGTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: WSLSSSAVRKLG*KKAVCTLVCPL
Trigger: AAGAGGACACACCAGAGTACATACTGCCTTCTTCCAACCCAGCTTTCTAACAGCAGAGCTGCTAAGGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp CTTGGAATGACCTACAGCAGAATTCCAGAAACTATCTaGACACCATCAGTCATGGGTGGATGGCGACCACTC +
Preference number: 6 (lower is better)
Translates to: LGMTYSRIPETI*TPSVMGGWRPL
Trigger: GAGTGGTCGCCATCCACCCATGACTGATGGTGTCCAGATAGTTTCTGGAATTCTGCTGTAGGTCATTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575412.1
ENST00000673307.1
CDS CCA 72 bp TTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTaGAATTGGAGTCTTAGTCCTGGAAACCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: FQERCCDAVLKP*NWSLSPGNLPH
Trigger: GTGGGGAAGGTTTCCAGGACTAAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571406.1
ENST00000673465.1
CDS GCA 72 bp TGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATGCTaGGATGCGGTTCTGAAACCCTGTTACTATCTTGGA +
Preference number: 6 (lower is better)
Translates to: CWLSLSAFQERC*DAVLKPCYYLG
Trigger: TCCAAGATAGTAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS GCA 72 bp CCTGTAATGCTAAGGGGCGGGCATGCTTCAAACCTCTaGTGGAACTTTCTAGTAAACACTGGACAGAGTGTA +
Preference number: 6 (lower is better)
Translates to: PVMLRGGHASNL*WNFLVNTGQSV
Trigger: TACACTCTGTCCAGTGTTTACTAGAAAGTTCCAGCAGAGGTTTGAAGCATGCCCGCCCCTTAGCATTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp CTCCGAAAAATTCTGAGTGGAAAGAAATGCAGCATCTaGAGCCCTAAAGCAGCTGAAGGCTATGCTGATGGC +
Preference number: 6 (lower is better)
Translates to: LRKILSGKKCSI*SPKAAEGYADG
Trigger: GCCATCAGCATAGCCTTCAGCTGCTTTAGGGCTGCAGATGCTGCATTTCTTTCCACTCAGAATTTTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp TTAGAAAGCTGGGTTGGAAGAAGGCAGTATGTACTCTaGTGTGTCCTCTTACACTCTCTCCCATGTCACAGC +
Preference number: 6 (lower is better)
Translates to: LESWVGRRQYVL*CVLLHSLPCHS
Trigger: GCTGTGACATGGGAGAGAGTGTAAGAGGACACACCAGAGTACATACTGCCTTCTTCCAACCCAGCTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp GAAAGATGCTGCGATGCGGTTCTGAAACCCTGGAATTaGAGTCTGGACAAAAACACGAGGAGACATGGTATC +
Preference number: 6 (lower is better)
Translates to: ERCCDAVLKPWN*SLDKNTRRHGI
Trigger: GATACCATGTCTCCTCGTGTTTTTGTCCAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CAA 72 bp TCCCAGGAGAGAGTCTTCCAGCTGAGTCGATGCTTCTaGCATATTTTGAGCAAGAGCTGTCAGAGGCAGTTT +
Preference number: 6 (lower is better)
Translates to: SQERVFQLSRCF*HILSKSCQRQF
Trigger: AAACTGCCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571480.5
ENST00000672878.1
CDS CAA 72 bp CTAACACTAGGACCTCACCCTCAGCACCAGCAACATTaGGGCCTGAATTATTTGTTGTGGTTGTCCTGTGCA +
Preference number: 6 (lower is better)
Translates to: LTLGPHPQHQQH*GLNYLLWLSCA
Trigger: TGCACAGGACAACCACAACAAATAATTCAGGCCCAAATGTTGCTGGTGCTGAGGGTGAGGTCCTAGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CAA 90 bp CTCTGCACCAAACCAACACTGCCACGTGGGAAAGCAAAGCCAGTGTaGCCAGATGTTCTCAACTTTCAGGAGAAGCCAGAAATCAGAATT +
Preference number: 6 (lower is better)
Translates to: LCTKPTLPRGKAKPV*PDVLNFQEKPEIRI
Trigger: AATTCTGATTTCTGGCTTCTCCTGAAAGTTGAGAACATCTGGCAACACTGGCTTTGCTTTCCCACGTGGCAGTGTTGGTTTGGTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 90 bp GTAGGTGAGGCTGTGCAAGAGGGGATACATCTGTTCTATTTGCTTTaGTTATTTGCCATCTACTGGAGCAGCAAACTATGGACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VGEAVQEGIHLFYLL*LFAIYWSSKLWTRL
Trigger: CAGCCTGGTCCATAGTTTGCTGCTCCAGTAGATGGCAAATAACAAAAGCAAATAGAACAGATGTATCCCCTCTTGCACAGCCTCACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp CTTTGCTGGCTGAGTCTGAGTGCATTTCAGGAAAGATaGTGCGATGCGGTTCTGAAACCCTGTTACTATCTT +
Preference number: 6 (lower is better)
Translates to: LCWLSLSAFQER*CDAVLKPCYYL
Trigger: AAGATAGTAACAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573765.1
ENST00000672412.1
CDS GCA 72 bp GCCTCTCAAACAACAGACCTACTATGTGTCAGGTACTaGAGGAGGCATGTAAAGTTAACAGAGACTCCCTAC +
Preference number: 6 (lower is better)
Translates to: ASQTTDLLCVRY*RRHVKLTETPY
Trigger: GTAGGGAGTCTCTGTTAACTTTACATGCCTCCTGCAGTACCTGACACATAGTAGGTCTGTTGTTTGAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp CCCAAACAGCTCCGAAAAATTCTGAGTGGAAAGAAATaGAGCATCTGCAGCCCTAAAGCAGCTGAAGGCTAT +
Preference number: 6 (lower is better)
Translates to: PKQLRKILSGKK*SICSPKAAEGY
Trigger: ATAGCCTTCAGCTGCTTTAGGGCTGCAGATGCTGCATTTCTTTCCACTCAGAATTTTTCGGAGCTGTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp TGGCTGTTTGCGACTTCTGGTGTAGACCATAAATGCTaGCACAATTCAAGAGGCAAAGTGTTTGCCATTGGC +
Preference number: 6 (lower is better)
Translates to: WLFATSGVDHKC*HNSRGKVFAIG
Trigger: GCCAATGGCAAACACTTTGCCTCTTGAATTGTGCCAGCATTTATGGTCTACACCAGAAGTCGCAAACAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp TTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTaGAATTGGAGTCTGGACAAAAACACGAGGAGACAT +
Preference number: 6 (lower is better)
Translates to: FQERCCDAVLKP*NWSLDKNTRRH
Trigger: ATGTCTCCTCGTGTTTTTGTCCAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CAA 72 bp AATGCTGGCACAATTCAAGAGGCAAAGTGTTTGCCATaGGCTTCAGCTGTCGGAGAAGGCTTCTCAAAGGAA +
Preference number: 6 (lower is better)
Translates to: NAGTIQEAKCLP*ASAVGEGFSKE
Trigger: TTCCTTTGAGAAGCCTTCTCCGACAGCTGAAGCCAATGGCAAACACTTTGCCTCTTGAATTGTGCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp GCAACTCCACTCGGCTTCAAGCCTGAGCAAAGCCAATaGACCTGGTACTGTTCAATGTCTTTGATCAATTTG +
Preference number: 6 (lower is better)
Translates to: ATPLGFKPEQSQ*TWYCSMSLINL
Trigger: CAAATTGATCAAAGACATTGAACAGTACCAGGTTCATTGGCTTTGCTCAGGCTTGAAGCCGAGTGGAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575283.5
ENST00000672814.1
CDS GCA 72 bp CGCAGAAGCAAAGGAGGGCAAACCAGTTGTGAAAACTaGTCCAGGGAGAAACACTTAAATCTTTCCAACAAC +
Preference number: 6 (lower is better)
Translates to: RRSKGGQTSCEN*SREKHLNLSNN
Trigger: GTTGTTGGAAAGATTTAAGTGTTTCTCCCTGGAGCAGTTTTCACAACTGGTTTGCCCTCCTTTGCTTCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS GCA 72 bp ACATTTGGGCCTGAATTATTTGTTGTGGTTGTCCTGTaGATTGTAGGTGTCACCCAACAGATGCCAGTGACA +
Preference number: 6 (lower is better)
Translates to: TFGPELFVVVVL*IVGVTQQMPVT
Trigger: TGTCACTGGCATCTGTTGGGTGACACCTACAATGCACAGGACAACCACAACAAATAATTCAGGCCCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573703.1
ENST00000672740.1
CDS CCA 72 bp TTTCAGGAAAGATGCTGCGATGCGGTTCTGAAACCCTaGAATTGGAGTCTGTTACTATCTTGGAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: FQERCCDAVLKP*NWSLLLSWKLL
Trigger: CAACAGCTTCCAAGATAGTAACAGACTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000570320.5
ENST00000572314.5
ENST00000575283.5
ENST00000672083.1
ENST00000672814.1
ENST00000673012.1
ENST00000673196.1
ENST00000673560.1
CDS CCA 72 bp AGGTGCAAGGACTGGACCTCAGAAAAGGCTGACTTCTaGGGTGGAGACAGAAATGAGCAATATATAATCCTT +
Preference number: 6 (lower is better)
Translates to: RCKDWTSEKADF*GGDRNEQYIIL
Trigger: AAGGATTATATATTGCTCATTTCTGTCTCCACCCCAGAAGTCAGCCTTTTCTGAGGTCCAGTCCTTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp GTGAGGGGCAATCAGCTGAGAAAAGATCAGGAATTGTaGGTCTGGGAATTTACATCTTATCCCAAGTTCACG +
Preference number: 6 (lower is better)
Translates to: VRGNQLRKDQEL*VWEFTSYPKFT
Trigger: CGTGAACTTGGGATAAGATGTAAATTCCCAGACTCACAATTCCTGATCTTTTCTCAGCTGATTGCCCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 90 bp CTGTTTTCTCAGCTAAGAAATTATCATGTGCTTGTAAACTGTTCCTaGAAACATCAGCCGCCATTACCACACGTCTACCTTCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: LFSQLRNYHVLVNCS*KHQPPLPHVYLPLS
Trigger: GCTGAGAGGAAGGTAGACGTGTGGTAATGGCGGCTGATGTTTCAAGGAACAGTTTACAAGCACATGATAATTTCTTAGCTGAGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455311.6
ENST00000672038.1
CDS TCA 72 bp ATTAGAACTCGGGGTGGTGAGAGGTACAAATGCTTCTaGTACATTAAATTCCACCTCTTCAGGGAAGAACCA +
Preference number: 6 (lower is better)
Translates to: IRTRGGERYKCF*YIKFHLFREEP
Trigger: TGGTTCTTCCCTGAAGAGGTGGAATTTAATGTATCAGAAGCATTTGTACCTCTCACCACCCCGAGTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289968.11
ENST00000303665.9
ENST00000572314.5
ENST00000575412.1
ENST00000672083.1
ENST00000673196.1
ENST00000673307.1
ENST00000673560.1
CDS GCA 72 bp ATATGGCTGTTTGCGACTTCTGGTGTAGACCATAAATaGTGGCACAATTCAAGAGGCAAAGTGTTTGCCATT +
Preference number: 6 (lower is better)
Translates to: IWLFATSGVDHK*WHNSRGKVFAI
Trigger: AATGGCAAACACTTTGCCTCTTGAATTGTGCCAGCATTTATGGTCTACACCAGAAGTCGCAAACAGCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp AGGACTATTTATTTTATGAGATTCGTTGCATCAGACTaGACTCCAACGACTCTGCCACTCCAGTATCATCAG +
Preference number: 6 (lower is better)
Translates to: RTIYFMRFVASD*TPTTLPLQYHQ
Trigger: CTGATGATACTGGAGTGGCAGAGTCGTTGGAGTCCAGTCTGATGCAACGAATCTCATAAAATAAATAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS TCA 72 bp TGGGGGTCTGGACCTTCCCAGAGGTCAAATCTTACCTaGAATACTTTGTCCCTTTTATCTAAAGCAATAAGT +
Preference number: 6 (lower is better)
Translates to: WGSGPSQRSNLT*NTLSLLSKAIS
Trigger: ACTTATTGCTTTAGATAAAAGGGACAAAGTATTTCAGGTAAGATTTGACCTCTGGGAAGGTCCAGACCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CAA 90 bp TGTTGCCAGATGTTCTCAACTTTCAGGAGAAGCCAGAAATCAGAATaGTTACATCAAACCATCTGGTTTTCACATGATGACAACCAACTT +
Preference number: 6 (lower is better)
Translates to: CCQMFSTFRRSQKSE*LHQTIWFSHDDNQL
Trigger: AAGTTGGTTGTCATCATGTGAAAACCAGATGGTTTGATGTAACAATTCTGATTTCTGGCTTCTCCTGAAAGTTGAGAACATCTGGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp ACCAAAAGGAAGATTTGCCAGAGCATACCGTTTCGTTaGAAAGAAATTTATTCTAGCCATGCAAAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: TKRKICQSIPFR*KEIYSSHAKPS
Trigger: AGAAGGCTTTGCATGGCTAGAATAAATTTCTTTTCAACGAAACGGTATGCTCTGGCAAATCTTCCTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS CCA 72 bp GCAGGAAAAGGATCTGAAATTCTAACTAGCTCACACTaGGCTTATAAAGCTAATGTTTACTTGGTGCCATAT +
Preference number: 6 (lower is better)
Translates to: AGKGSEILTSSH*AYKANVYLVPY
Trigger: ATATGGCACCAAGTAAACATTAGCTTTATAAGCCCAGTGTGAGCTAGTTAGAATTTCAGATCCTTTTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS CAA 72 bp AAAGCAACCAATGCGGAGTTTTCAGTTCTACTGCGTTaGGACTTAAATTGGGCAGTACTTAATACCATGAAA +
Preference number: 6 (lower is better)
Translates to: KATNAEFSVLLR*DLNWAVLNTMK
Trigger: TTTCATGGTATTAAGTACTGCCCAATTTAAGTCCAAACGCAGTAGAACTGAAAACTCCGCATTGGTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570320.5
ENST00000673012.1
CDS CAA 72 bp ATGTTCTCAACTTTCAGGAGAAGCCAGAAATCAGAATaGTTACATCAAACCATCTGGTTTTCACATGATGAC +
Preference number: 6 (lower is better)
Translates to: MFSTFRRSQKSE*LHQTIWFSHDD
Trigger: GTCATCATGTGAAAACCAGATGGTTTGATGTAACAATTCTGATTTCTGGCTTCTCCTGAAAGTTGAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572314.5
ENST00000672083.1
CDS TCA 72 bp ATTGGAGTCATTAAATATTCCAATCTCAGTTCTTACTaGATATGGCAGGTCATACATCTGTTACTATCTTGG +
Preference number: 6 (lower is better)
Translates to: IGVIKYSNLSSY*IWQVIHLLLSW
Trigger: CCAAGATAGTAACAGATGTATGACCTGCCATATTCAGTAAGAACTGAGATTGGAATATTTAATGACTCCAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571843.1
ENST00000673130.1