RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000165322

Ensembl transcript IDs: ENST00000311380.8, ENST00000344936.7, ENST00000375245.8, ENST00000375250.9, ENST00000396144.8, ENST00000454919.1, ENST00000492028.5, ENST00000493008.1, ENST00000497085.1, ENST00000497103.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAAGACAGCCCTAAAATaGCCTGAACTGACTTCCGCT +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIKTALK*PELTSA
Trigger: AGCGGAAGTCAGTTCAGGGCATTTTAGGGCTGTCTT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACAAAGCAGCAAATATaGGGGCCTAACACACATCTC +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITKQQI*GPNTHL
Trigger: GAGATGTGTGTTAGGCCCTCATATTTGCTGCTTTGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAAGACTGCCACTGCATaGAGAAACCCCGAAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIKTATA*RNPEKE
Trigger: TTCTTTTTCGGGGTTTCTGCATGCAGTGGCAGTCTT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACAAAGCAGCAAATATaGGGGCCTAACACACATCTC +
Preference number: 2 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTKQQI*GPNTHL
Trigger: GAGATGTGTGTTAGGCCCTCATATTTGCTGCTTTGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAAGACTGCCACTGCATaGAGAAACCCCGAAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPKTATA*RNPEKE
Trigger: TTCTTTTTCGGGGTTTCTGCATGCAGTGGCAGTCTT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATGCCCAAGAGCCTTTaGAACATAACTGAAAGTATT +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIMPKSL*NITESI
Trigger: AATACTTTCAGTTATGTTGCAAAGGCTCTTGGGCAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGTAATATTAGTGTGCTaGCCAAACAAGCAACTAAGA +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIVILVC*PNKQLR
Trigger: TCTTAGTTGCTTGTTTGGGCAGCACACTAATATTAC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGTTATAATGAATTTTaGCACTTAAGACTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGYNEF*HLRLPL
Trigger: CAGTGGCAGTCTTAAGTGCCAAAATTCATTATAACC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATGCCCAAGAGCCTTTaGAACATAACTGAAAGTATT +
Preference number: 2 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPMPKSL*NITESI
Trigger: AATACTTTCAGTTATGTTGCAAAGGCTCTTGGGCAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGTTATAATGAATTTTaGCACTTAAGACTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGYNEF*HLRLPL
Trigger: CAGTGGCAGTCTTAAGTGCCAAAATTCATTATAACC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATAACGGACTATTTCTaGAGGAAACCTAATATTCAC +
Preference number: 2 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIITDYF*RKPNIH
Trigger: GTGAATATTAGGTTTCCTCCAGAAATAGTCCGTTAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCGCAGTTATATCAACTaGCAACAAAGCAGCAAATAT +
Preference number: 3 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIRSYIN*QQSSKY
Trigger: ATATTTGCTGCTTTGTTGCAAGTTGATATAACTGCG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
3UTR-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCGCAGTTATATCAACTaGCAACAAAGCAGCAAATAT +
Preference number: 3 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPRSYIN*QQSSKY
Trigger: ATATTTGCTGCTTTGTTGCAAGTTGATATAACTGCG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCCGTCCCCGCAGGCTaGCCTCTGAGGGAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPVPAG*PLREGK
Trigger: CTTACCCTCCCTCAGAGGCCAGCCTGCGGGGACGGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCCCGTCCCCGCAGGCTaGCCTCTGAGGGAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPPVPAG*PLREGK
Trigger: CTTACCCTCCCTCAGAGGCCAGCCTGCGGGGACGGG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCGCAGGCTGGCCTCTaGGGGAGGGTAAGTTACAGG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPQAGL*GRVSYR
Trigger: CCTGTAACTTACCCTCCCTCAGAGGCCAGCCTGCGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375245.8
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGAATCTGGCCTTCCTTaGTTTGGAGGTGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIESGLP*FGGVVA
Trigger: GGCAACCACACCTCCAAATCAAGGAAGGCCAGATTC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGAAATCTCCTTTGCTaGTGCTTGCATCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGNLLC*CLHPES
Trigger: GGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGGCAATTCCCATTCTaGCCGAGATCCGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIWQFPF*PRSVCT
Trigger: AGTGCAGACGGATCTCGGTCAGAATGGGAATTGCCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGCAGACCAGCTACCTaGTTAACAGGTGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGRPAT*LTGGMR
Trigger: TCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCCTTTGCTGATGCTTaGATCCCGAGTCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISFADA*IPSPTR
Trigger: CCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTGCTGGCTGTATCTTaGTGCTTTGGTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILLAVS*CFGEEG
Trigger: TCCCTCCTCACCAAAGCACCAAGATACAGCCAGCAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCTGGACCGGGAAAATaGCCAAATGAGCGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISGPGK*PNERVL
Trigger: TAGGACACGCTCATTTGGTCATTTTCCCGGTCCAGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGAATCTGGCCTTCCTTaGTTTGGAGGTGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPESGLP*FGGVVA
Trigger: GGCAACCACACCTCCAAATCAAGGAAGGCCAGATTC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCATTCTCCATTAATCTaGATTGCCGGGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIHSPLI*IAGLPG
Trigger: TCCTGGGAGCCCGGCAATTCAGATTAATGGAGAATG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGAAATCTCCTTTGCTaGTGCTTGCATCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGNLLC*CLHPES
Trigger: GGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGATCATCAACATGCTTaGGCCACTCTTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIDHQHA*ATLDPL
Trigger: CAGGGGATCAAGAGTGGCTCAAGCATGTTGATGATC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGGCAATTCCCATTCTaGCCGAGATCCGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPWQFPF*PRSVCT
Trigger: AGTGCAGACGGATCTCGGTCAGAATGGGAATTGCCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTCATCCAACTCTTCTaGCCAACCCCTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFIQLF*PTPWRR
Trigger: TCTCCTCCAAGGGGTTGGTCAGAAGAGTTGGATGAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGCAGACCAGCTACCTaGTTAACAGGTGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGRPAT*LTGGMR
Trigger: TCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCCATTAATCTGAATTaGCGGGCTCCCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISINLN*RAPRKW
Trigger: CCACTTCCTGGGAGCCCGGCAATTCAGATTAATGGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCCTTTGCTGATGCTTaGATCCCGAGTCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSFADA*IPSPTR
Trigger: CCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAATACTATTGGTTCTTaGAGCCGCCTGTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTINTIGS*SRLSRL
Trigger: GAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGCCATCTCAATTGTTaGCCCCTTGAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISHLNC*PLEVHC
Trigger: ACAGTGGACCTCAAGGGGGCAACAATTGAGATGGCT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTGGCTGTATCTTGGTaGTTTGGTGAGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILAVSW*FGEEGE
Trigger: TTCTCCCTCCTCACCAAAGCACCAAGATACAGCCAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTACCTGCTTAACAGGTaGCATGAGAGCTTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIYLLNR*HESFAR
Trigger: ACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTGCTGGCTGTATCTTaGTGCTTTGGTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLLAVS*CFGEEG
Trigger: TCCCTCCTCACCAAAGCACCAAGATACAGCCAGCAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGTCCAGGCTTAGGTTaGCAGTCTGACCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGPGLG*QSDLDY
Trigger: ATAATCAAGGTCAGACTGTCAACCTAAGCCTGGACC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCTGGACCGGGAAAATaGCCAAATGAGCGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSGPGK*PNERVL
Trigger: TAGGACACGCTCATTTGGTCATTTTCCCGGTCCAGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCATTCTCCATTAATCTaGATTGCCGGGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPHSPLI*IAGLPG
Trigger: TCCTGGGAGCCCGGCAATTCAGATTAATGGAGAATG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGATCATCAACATGCTTaGGCCACTCTTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPDHQHA*ATLDPL
Trigger: CAGGGGATCAAGAGTGGCTCAAGCATGTTGATGATC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACCACACTGACTATCTaGCTGGCTGTAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITTLTI*LAVRSA
Trigger: AGCACTTCTTACAGCCAGTCAGATAGTCAGTGTGGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTCATCCAACTCTTCTaGCCAACCCCTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFIQLF*PTPWRR
Trigger: TCTCCTCCAAGGGGTTGGTCAGAAGAGTTGGATGAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCATCTGGCTTGACTTaGCACCAGTCATCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISSGLT*HQSSLV
Trigger: GACCAATGATGACTGGTGGCAAGTCAAGCCAGATGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCCATTAATCTGAATTaGCGGGCTCCCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSINLN*RAPRKW
Trigger: CCACTTCCTGGGAGCCCGGCAATTCAGATTAATGGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAATACTATTGGTTCTTaGAGCCGCCTGTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPNTIGS*SRLSRL
Trigger: GAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGTAAAGATGAACCCTaGAACACCGCCCAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISKDEP*NTAQED
Trigger: GTCTTCTTGGGCGGTGTTGCAGGGTTCATCTTTACT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGCCATCTCAATTGTTaGCCCCTTGAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSHLNC*PLEVHC
Trigger: ACAGTGGACCTCAAGGGGGCAACAATTGAGATGGCT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTTCACGAACAGCTTaGAAAGTGGGGCGTCGTGTA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFSRTA*KVGRRV
Trigger: TACACGACGCCCCACTTTGCAAGCTGTTCGTGAAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGATCACTGCGAGGTTaGCACTTACTCTGTATATCC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGSLRG*HLLCIS
Trigger: GGATATACAGAGTAAGTGGCAACCTCGCAGTGATCC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTGGCTGTATCTTGGTaGTTTGGTGAGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLAVSW*FGEEGE
Trigger: TTCTCCCTCCTCACCAAAGCACCAAGATACAGCCAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGGCCTTCCTTGATTTaGAGGTGTGGTTGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIWPSLI*RCGCPY
Trigger: ATAAGGGCAACCACACCTCCAAATCAAGGAAGGCCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGTCCACTGTGAACTCTaGTTTGGACTGATTACTGCC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIVHCEL*FGLITA
Trigger: GGCAGTAATCAGTCCAAACCAGAGTTCACAGTGGAC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGCAAACCTTAGTTTCTaGATCACTGCGAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIANLSF*ITARLP
Trigger: TGGCAACCTCGCAGTGATCCAGAAACTAAGGTTTGC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGATCCTTTGGACTGCTaGCTGTATCTTGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIDPLDC*LYLGAL
Trigger: CAAAGCACCAAGATACAGCCAGCAGTCCAAAGGATC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGTTTTCATCTGGCTTaGCTTGCCACCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISFHLA*LATSHH
Trigger: ATGATGACTGGTGGCAAGTCAAGCCAGATGAAAACT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGTTCCTTGAACAGATaGCGATGGCTTTCCGAAACT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICSLNR*RWLSET
Trigger: AGTTTCGGAAAGCCATCGTCATCTGTTCAAGGAACA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGTCCAGGCTTAGGTTaGCAGTCTGACCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGPGLG*QSDLDY
Trigger: ATAATCAAGGTCAGACTGTCAACCTAAGCCTGGACC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGTAATAGCAACGCCCTaGGCTGTCTTTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIVIATP*AVFMSF
Trigger: GAAACTCATAAAGACAGCTCAGGGCGTTGCTATTAC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGCTTGAGCCACTCTTaGTCCCCTGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCLSHS*SPGFWK
Trigger: TTTCCAAAATCCAGGGGATCAAGAGTGGCTCAAGCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTTTTCTATTCCTGGTaGATCCGGTATCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILFYSW*IRYLLF
Trigger: GAAGAGGAGATACCGGATTCACCAGGAATAGAAAAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCACACACACGTACCTTaGAACAAGAAACACAGGACA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIHTHVP*NKKHRT
Trigger: TGTCCTGTGTTTCTTGTTTCAAGGTACGTGTGTGTG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACCACACTGACTATCTaGCTGGCTGTAAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTTLTI*LAVRSA
Trigger: AGCACTTCTTACAGCCAGTCAGATAGTCAGTGTGGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCATCTGGCTTGACTTaGCACCAGTCATCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSSGLT*HQSSLV
Trigger: GACCAATGATGACTGGTGGCAAGTCAAGCCAGATGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATTTGGAGGTGTGGTTaGCCTTATCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIIWRCG*PYLFSG
Trigger: TCCACTGAACAGATAAGGGCAACCACACCTCCAAAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGTAAAGATGAACCCTaGAACACCGCCCAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSKDEP*NTAQED
Trigger: GTCTTCTTGGGCGGTGTTGCAGGGTTCATCTTTACT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTTCACGAACAGCTTaGAAAGTGGGGCGTCGTGTA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFSRTA*KVGRRV
Trigger: TACACGACGCCCCACTTTGCAAGCTGTTCGTGAAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGATCACTGCGAGGTTaGCACTTACTCTGTATATCC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGSLRG*HLLCIS
Trigger: GGATATACAGAGTAAGTGGCAACCTCGCAGTGATCC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAAGACAGCCCTAAAATaGCCTGAACTGACTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPKTALK*PELTSA
Trigger: AGCGGAAGTCAGTTCAGGGCATTTTAGGGCTGTCTT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTGGAGTTTTCATCTaGCTTGACTTGCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFGVFI*LDLPPV
Trigger: GACTGGTGGCAAGTCAAGCCAGATGAAAACTCCAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTTCACATACTGGGCTaGCACATAAAACGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILHILG*HIKRFG
Trigger: TCCAAAGCGTTTTATGTGCCAGCCCAGTATGTGAAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTCGTGGAGTTATTTaGCAGACCAGCTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFRGVI*QTSYLL
Trigger: AAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGAGCGTGTCCTATTCTaGCTGGAAACTTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIERVLF*LETLGE
Trigger: TTCTCCTAAAGTTTCCAGCCAGAATAGGACACGCTC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTTGATTTGGAGGTGTaGTTGCCCTTATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILDLEV*LPLSVQ
Trigger: CTGAACAGATAAGGGCAACCACACCTCCAAATCAAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGGCCTTCCTTGATTTaGAGGTGTGGTTGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPWPSLI*RCGCPY
Trigger: ATAAGGGCAACCACACCTCCAAATCAAGGAAGGCCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATAGACAGGAGAATCTaGCCTTCCTTGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIIDRRI*PSLIWR
Trigger: CCTCCAAATCAAGGAAGGCCAGATTCTCCTGTCTAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTCCACTGTGAACTCTaGTTTGGACTGATTACTGCC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVHCEL*FGLITA
Trigger: GGCAGTAATCAGTCCAAACCAGAGTTCACAGTGGAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGCAAACCTTAGTTTCTaGATCACTGCGAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPANLSF*ITARLP
Trigger: TGGCAACCTCGCAGTGATCCAGAAACTAAGGTTTGC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGTGTACGTTGTGGGTaGAGAAATGTTGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISVRCG*RNVGME
Trigger: TTCCATGCCAACATTTCTCCACCCACAACGTACACT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGTTTTCATCTGGCTTaGCTTGCCACCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSFHLA*LATSHH
Trigger: ATGATGACTGGTGGCAAGTCAAGCCAGATGAAAACT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGGCTTTCCGAAACTTaGAAGCTCAGGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIWLSET*KLRQFV
Trigger: AACAAATTGCCTGAGCTTTCAAGTTTCGGAAAGCCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGTTCCTTGAACAGATaGCGATGGCTTTCCGAAACT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCSLNR*RWLSET
Trigger: AGTTTCGGAAAGCCATCGTCATCTGTTCAAGGAACA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATAAGACCTGTTCCTTaGACAGATGACGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIIRPVP*TDDDGF
Trigger: AAAGCCATCGTCATCTGTTCAAGGAACAGGTCTTAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCTGAGCTGTCTTTATaGGTTTCCCATTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPELSL*VSHSPL
Trigger: TAATGGAGAATGGGAAACTCATAAAGACAGCTCAGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTAATAGCAACGCCCTaGGCTGTCTTTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVIATP*AVFMSF
Trigger: GAAACTCATAAAGACAGCTCAGGGCGTTGCTATTAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCTTTGCTGCTGGGATaGAGCATTATACTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISLLLG*SIILWQ
Trigger: TTGCCAAAGTATAATGCTTCATCCCAGCAGCAAAGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGCTGGATTTATCCTTTaGAGCCATCTCAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIAGFIL*SHLNCC
Trigger: GCAACAATTGAGATGGCTTCAAAGGATAAATCCAGC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGCAGTTCTGTTCCTTaGCGAGTTTTCAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISSSVP*RVFSSN
Trigger: ATTTGAGCTGAAAACTCGTCAAGGAACAGAACTGCT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCACACACACGTACCTTaGAACAAGAAACACAGGACA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPHTHVP*NKKHRT
Trigger: TGTCCTGTGTTTCTTGTTTCAAGGTACGTGTGTGTG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGATGAAAGAAGCTCTTaGTCCCCTGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIDERSS*SPGFWK
Trigger: TTTCCAAAATCCAGGGGATCAAGAGCTTCTTTCATC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTAGTTTTCTTCCGATaGAAGAAGCTCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVVFFR*KKLLIP
Trigger: GGGGATCAAGAGCTTCTTTCATCGGAAGAAAACTAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAATCCATATTTCTCTTaGTCCTTTGGACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTINPYFS*SFGLLA
Trigger: AGCCAGCAGTCCAAAGGATCAAGAGAAATATGGATT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTCAGAGCCTTCTCCTaGGGAATCACAAGATTGTTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFRAFS*GITRLF
Trigger: GAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATTTGGAGGTGTGGTTaGCCTTATCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPIWRCG*PYLFSG
Trigger: TCCACTGAACAGATAAGGGCAACCACACCTCCAAAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGTCGGAAAAGAATCTaGATTGTGTCTTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICRKRI*IVSWFG
Trigger: GCCAAACCAAGACACAATGCAGATTCTTTTCCGACA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACTGGCTGTAAGAAGTaGTGTAGTAGTTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITGCKK*CSSFLP
Trigger: CGGAAGAAAACTACTACAGCACTTCTTACAGCCAGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTGGTATATAAGGTATaGCCACGTTCATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILVYKV*PRSSNS
Trigger: AGAGTTGGATGAACGTGGGCATACCTTATATACCAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTGGAGTTTTCATCTaGCTTGACTTGCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFGVFI*LDLPPV
Trigger: GACTGGTGGCAAGTCAAGCCAGATGAAAACTCCAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTTCACATACTGGGCTaGCACATAAAACGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLHILG*HIKRFG
Trigger: TCCAAAGCGTTTTATGTGCCAGCCCAGTATGTGAAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTCGTGGAGTTATTTaGCAGACCAGCTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFRGVI*QTSYLL
Trigger: AAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGAGCGTGTCCTATTCTaGCTGGAAACTTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPERVLF*LETLGE
Trigger: TTCTCCTAAAGTTTCCAGCCAGAATAGGACACGCTC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTACATCCAAGAACTCTaGACCGGGAAAATGACCAAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIYIQEL*TGKMTK
Trigger: TTTGGTCATTTTCCCGGTCCAGAGTTCTTGGATGTA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTTGATTTGGAGGTGTaGTTGCCCTTATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLDLEV*LPLSVQ
Trigger: CTGAACAGATAAGGGCAACCACACCTCCAAATCAAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATAGACAGGAGAATCTaGCCTTCCTTGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPIDRRI*PSLIWR
Trigger: CCTCCAAATCAAGGAAGGCCAGATTCTCCTGTCTAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAGCGACTCGCTGTCTTaGTTCTTGCTTAATTGCATT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISDSLS*FLLNCI
Trigger: AATGCAATTAAGCAAGAACCAAGACAGCGAGTCGCT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCATTGTGTCTTGGTTTaGCTTTGGCAACTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIHCVLV*LWQLSD
Trigger: ATCAGACAGTTGCCAAAGCCAAACCAAGACACAATG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATCTGCATTGTGTCTTaGTTTGGCTTTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIICIVS*FGFGNC
Trigger: ACAGTTGCCAAAGCCAAACCAAGACACAATGCAGAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATCAACGTCCGAAGATaGAACTCAGTTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIINVRR*NSVPEE
Trigger: TTCTTCTGGAACTGAGTTCCATCTTCGGACGTTGAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGTGTACGTTGTGGGTaGAGAAATGTTGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSVRCG*RNVGME
Trigger: TTCCATGCCAACATTTCTCCACCCACAACGTACACT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATAAGACCTGTTCCTTaGACAGATGACGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPIRPVP*TDDDGF
Trigger: AAAGCCATCGTCATCTGTTCAAGGAACAGGTCTTAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCAGATTCAGAATCTTaGTGTATTCTTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPDSES*CILSEP
Trigger: AGGCTCTGAAAGAATACATCAAGATTCTGAATCTGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCCTGAGCTGTCTTTATaGGTTTCCCATTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPPELSL*VSHSPL
Trigger: TAATGGAGAATGGGAAACTCATAAAGACAGCTCAGG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCTTTGCTGCTGGGATaGAGCATTATACTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSLLLG*SIILWQ
Trigger: TTGCCAAAGTATAATGCTTCATCCCAGCAGCAAAGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAACTCTGGTTTGGACTaGTTACTGCCAAACCAACTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPNSGLD*LLPNQL
Trigger: AAGTTGGTTTGGCAGTAATCAGTCCAAACCAGAGTT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGCTGGATTTATCCTTTaGAGCCATCTCAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPAGFIL*SHLNCC
Trigger: GCAACAATTGAGATGGCTTCAAAGGATAAATCCAGC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGCAGTTCTGTTCCTTaGCGAGTTTTCAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSSSVP*RVFSSN
Trigger: ATTTGAGCTGAAAACTCGTCAAGGAACAGAACTGCT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTGTCATTGTCAGACTaGATTAGCAGTTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVSLSD*ISSSVP
Trigger: AGGAACAGAACTGCTAATTCAGTCTGACAATGACAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGCTCCAGTAATGACATaGATATCTTCCCATTTACTG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIAPVMT*ISSHLL
Trigger: CAGTAAATGGGAAGATATTCATGTCATTACTGGAGC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTCTGGTACACAGTATaGACTGCTATATTACCAGTC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFWYTV*TAILPV
Trigger: GACTGGTAATATAGCAGTTCATACTGTGTACCAGAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACCACAAAATTCAGGTaGGAGGTTTTTAGACAGATC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITTKFR*EVFRQI
Trigger: GATCTGTCTAAAAACCTCTCACCTGAATTTTGTGGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGATGAAAGAAGCTCTTaGTCCCCTGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPDERSS*SPGFWK
Trigger: TTTCCAAAATCCAGGGGATCAAGAGCTTCTTTCATC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAATCCATATTTCTCTTaGTCCTTTGGACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPNPYFS*SFGLLA
Trigger: AGCCAGCAGTCCAAAGGATCAAGAGAAATATGGATT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGTCGGAAAAGAATCTaGATTGTGTCTTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCRKRI*IVSWFG
Trigger: GCCAAACCAAGACACAATGCAGATTCTTTTCCGACA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCACCCGAAACAATCTaGTTTAGCTATCAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPPETI*FSYQVV
Trigger: AACTACTTGATAGCTAAAGCAGATTGTTTCGGGTGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACTGGCTGTAAGAAGTaGTGTAGTAGTTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTGCKK*CSSFLP
Trigger: CGGAAGAAAACTACTACAGCACTTCTTACAGCCAGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTGGTATATAAGGTATaGCCACGTTCATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLVYKV*PRSSNS
Trigger: AGAGTTGGATGAACGTGGGCATACCTTATATACCAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCTGCATTATTTTCGTaGAGTTATTTGGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISALFS*SYLADQ
Trigger: CTGGTCTGCCAAATAACTCCACGAAAATAATGCAGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTACATCCAAGAACTCTaGACCGGGAAAATGACCAAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPYIQEL*TGKMTK
Trigger: TTTGGTCATTTTCCCGGTCCAGAGTTCTTGGATGTA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCACAAGATTGTTCCTaGGAGAAGCTAGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISQDCS*EKLVFS
Trigger: AGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGCGACTCGCTGTCTTaGTTCTTGCTTAATTGCATT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSDSLS*FLLNCI
Trigger: AATGCAATTAAGCAAGAACCAAGACAGCGAGTCGCT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATCTGCATTGTGTCTTaGTTTGGCTTTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPICIVS*FGFGNC
Trigger: ACAGTTGCCAAAGCCAAACCAAGACACAATGCAGAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATCAACGTCCGAAGATaGAACTCAGTTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPINVRR*NSVPEE
Trigger: TTCTTCTGGAACTGAGTTCCATCTTCGGACGTTGAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAAAAAGTGTACGTTGTaGGTGGAGAAATGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIKKCTL*VEKCWH
Trigger: ATGCCAACATTTCTCCACCCACAACGTACACTTTTT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTCTCTTGATCCTTTaGACTGCTGGCTGTATCTTG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFLLIL*TAGCIL
Trigger: CAAGATACAGCCAGCAGTCCAAAGGATCAAGAGAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTTCTGTTGATCTCTaGAGATGCAAACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFSVDL*RCKLCI
Trigger: AATGCAGAGTTTGCATCTTCAGAGATCAACAGAAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCCAGATTCAGAATCTTaGTGTATTCTTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPPDSES*CILSEP
Trigger: AGGCTCTGAAAGAATACATCAAGATTCTGAATCTGG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCCAATTTCTCATCATaGTTGACTGCAAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISNFSS*LTANLS
Trigger: ACTAAGGTTTGCAGTCAATCATGATGAGAAATTGGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGCTCCAGTAATGACATaGATATCTTCCCATTTACTG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPAPVMT*ISSHLL
Trigger: CAGTAAATGGGAAGATATTCATGTCATTACTGGAGC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTCTGGTACACAGTATaGACTGCTATATTACCAGTC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFWYTV*TAILPV
Trigger: GACTGGTAATATAGCAGTTCATACTGTGTACCAGAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCCATTCTCATTACAGTaGTTTGCCTGTAAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIPFSLQ*FACKCS
Trigger: ACTACATTTACAGGCAAATCACTGTAATGAGAATGG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACCACAAAATTCAGGTaGGAGGTTTTTAGACAGATC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTTKFR*EVFRQI
Trigger: GATCTGTCTAAAAACCTCTCACCTGAATTTTGTGGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGTCCAATACAATGGTaGTATGTCTCCACTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICPIQW*YVSTLL
Trigger: TAACAAAGTGGAGACATAGCACCATTGTATTGGACA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGGACCAAAAACAATTaGTATACTCTGATAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGTKNN*YTLIGH
Trigger: ATGACCTATCAGAGTATAGCAATTGTTTTTGGTCCC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCCACCCGAAACAATCTaGTTTAGCTATCAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPPPETI*FSYQVV
Trigger: AACTACTTGATAGCTAAAGCAGATTGTTTCGGGTGG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCTGCATTATTTTCGTaGAGTTATTTGGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSALFS*SYLADQ
Trigger: CTGGTCTGCCAAATAACTCCACGAAAATAATGCAGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAAAAAGTGTACGTTGTaGGTGGAGAAATGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPKKCTL*VEKCWH
Trigger: ATGCCAACATTTCTCCACCCACAACGTACACTTTTT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTTCTGTTGATCTCTaGAGATGCAAACTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFSVDL*RCKLCI
Trigger: AATGCAGAGTTTGCATCTTCAGAGATCAACAGAAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCCAATTTCTCATCATaGTTGACTGCAAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSNFSS*LTANLS
Trigger: ACTAAGGTTTGCAGTCAATCATGATGAGAAATTGGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR TCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCCATTCTCATTACAGTaGTTTGCCTGTAAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPPFSLQ*FACKCS
Trigger: ACTACATTTACAGGCAAATCACTGTAATGAGAATGG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATTATTTCTCTTTGCTaGTGGGATGAAGCATTATAC +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIIISLC*WDEALY
Trigger: GTATAATGCTTCATCCCAGCAGCAAAGAGAAATAAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGTCCAATACAATGGTaGTATGTCTCCACTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCPIQW*YVSTLL
Trigger: TAACAAAGTGGAGACATAGCACCATTGTATTGGACA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGGACCAAAAACAATTaGTATACTCTGATAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGTKNN*YTLIGH
Trigger: ATGACCTATCAGAGTATAGCAATTGTTTTTGGTCCC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTAATATTAGTGTGCTaGCCAAACAAGCAACTAAGA +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVILVC*PNKQLR
Trigger: TCTTAGTTGCTTGTTTGGGCAGCACACTAATATTAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATTTCTCTTTGCTGCTaGGATGAAGCATTATACTTT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIISLCC*DEALYF
Trigger: AAAGTATAATGCTTCATCCCAGCAGCAAAGAGAAAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGTTATACCACATTATaGCTTTATGGCTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICYTTL*LYGLLD
Trigger: ATCCAACAAGCCATAAAGCCATAATGTGGTATAACA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATTATTTCTCTTTGCTaGTGGGATGAAGCATTATAC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPIISLC*WDEALY
Trigger: GTATAATGCTTCATCCCAGCAGCAAAGAGAAATAAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR GCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTACACAGTATGAACTaGTATATTACCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVHSMN*YITSLF
Trigger: AAAGAGACTGGTAATATAGCAGTTCATACTGTGTAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATTTCTCTTTGCTGCTaGGATGAAGCATTATACTTT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPISLCC*DEALYF
Trigger: AAAGTATAATGCTTCATCCCAGCAGCAAAGAGAAAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATAACGGACTATTTCTaGAGGAAACCTAATATTCAC +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPITDYF*RKPNIH
Trigger: GTGAATATTAGGTTTCCTCCAGAAATAGTCCGTTAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CCA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGTTATACCACATTATaGCTTTATGGCTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCYTTL*LYGLLD
Trigger: ATCCAACAAGCCATAAAGCCATAATGTGGTATAACA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp GGCGGCCTCGCAGCAGGCGGCTCCCTTCTTAGTCCGCCCCGCGGCTaGGGGTCGACGACGCGAGCCCGAAGAGCGTTCACACGGCTACGG +
Preference number: 5 (lower is better)
Translates to: GGLAAGGSLLSPPRG*GSTTRARRAFTRLR
Trigger: CCGTAGCCGTGTGAACGCTCTTCGGGCTCGCGTCGTCGACCCGCAGCCGCGGGGCGGACTAAGAAGGGAGCCGCCTGCTGCGAGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp AGGTGGCATGAGAGCTTTGCGCGTGACCTCCTTCACATACTGGGCTaGCACATAAAACGCTTTGGAGTTTTCATCTGGCTTGACTTGCCA +
Preference number: 5 (lower is better)
Translates to: RWHESFARDLLHILG*HIKRFGVFIWLDLP
Trigger: TGGCAAGTCAAGCCAGATGAAAACTCCAAAGCGTTTTATGTGCCAGCCCAGTATGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp TATTTTCGTGGAGTTATTTGGCAGACCAGCTACCTGCTTAACAGGTaGCATGAGAGCTTTGCGCGTGACCTCCTTCACATACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: YFRGVIWQTSYLLNR*HESFARDLLHILGW
Trigger: CCAGCCCAGTATGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp CCACTCTTGATCCCCTGGATTTTGGAAATCTCCTTTGCTGATGCTTaGATCCCGAGTCCAACGAGGAGGTTTCCAAGTTCTTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PLLIPWILEISFADA*IPSPTRRFPSSFLC
Trigger: ACACAGGAAAGAACTTGGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS GCA 90 bp AAACTCTGCATTATTTTCGTGGAGTTATTTGGCAGACCAGCTACCTaGTTAACAGGTGGCATGAGAGCTTTGCGCGTGACCTCCTTCACA +
Preference number: 5 (lower is better)
Translates to: KLCIIFVELFGRPAT*LTGGMRALRVTSFT
Trigger: TGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAATAATGCAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp AAGCTCTTGATCCCCTGGATTTTGGAAATCTCCTTTGCTGATGCTTaGATCCCGAGTCCAACGAGGAGGTTTCCAAGTTCTTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: KLLIPWILEISFADA*IPSPTRRFPSSFLC
Trigger: ACACAGGAAAGAACTTGGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp CCCTTGGAGGAGAACCACACTGACTATCTGACTGGCTGTAAGAAGTaGTGTAGTAGTTTTCTTCCGATGAAAGAAGCTCTTGATCCCCTG +
Preference number: 5 (lower is better)
Translates to: PLEENHTDYLTGCKK*CSSFLPMKEALDPL
Trigger: CAGGGGATCAAGAGCTTCTTTCATCGGAAGAAAACTACTACAGCACTTCTTACAGCCAGTCAGATAGTCAGTGTGGTTCTCCTCCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp AGTTTCCCATTCTCCATTAATCTGAATTGCCGGGCTCCCAGGAAGTaGGGGAAGAGCAGACTGGGATATTTTCAGTTCTTGAAGGTTAGC +
Preference number: 5 (lower is better)
Translates to: SFPFSINLNCRAPRK*GKSRLGYFQFLKVS
Trigger: GCTAACCTTCAAGAACTGAAAATATCCCAGTCTGCTCTTCCCCCACTTCCTGGGAGCCCGGCAATTCAGATTAATGGAGAATGGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp TGTATTCTTTCAGAGCCTTCTCCTGCGGAATCACAAGATTGTTCCTaGGAGAAGCTAGTTTTCTCTACATCCAAGAACTCTGGACCGGGA +
Preference number: 5 (lower is better)
Translates to: CILSEPSPAESQDCS*EKLVFSTSKNSGPG
Trigger: TCCCGGTCCAGAGTTCTTGGATGTAGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 90 bp ATGAAAGAAGCTCTTGATCCCCTGGATTTTGGAAATCTCCTTTGCTaGTGCTTGCATCCCGAGTCCAACGAGGAGGTTTCCAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: MKEALDPLDFGNLLC*CLHPESNEEVSKFF
Trigger: AAAGAACTTGGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGCTTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGTGGCATGAGAGCTTaGCGCGTGACCTCCTTCACA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGGMRA*RVTSFT
Trigger: TGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 90 bp GAGAAGCTAGTTTTCTCTACATCCAAGAACTCTGGACCGGGAAAATaGCCAAATGAGCGTGTCCTATTCTGGCTGGAAACTTTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: EKLVFSTSKNSGPGK*PNERVLFWLETLGE
Trigger: TTCTCCTAAAGTTTCCAGCCAGAATAGGACACGCTCATTTGGTCATTTTCCCGGTCCAGAGTTCTTGGATGTAGAGAAAACTAGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp TCTTGCAGCCGCCTGTCCAGGCTCCTACTTTTAATTATTTCTCTTTaGTGCTGGGATGAAGCATTATACTTTGGCAATTCCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: SCSRLSRLLLLIISL*CWDEALYFGNSHSD
Trigger: GTCAGAATGGGAATTGCCAAAGTATAATGCTTCATCCCAGCAGCAAAGAGAAATAATTAAAAGTAGGAGCCTGGACAGGCGGCTGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGTGGCATGAGAGCTTaGCGCGTGACCTCCTTCACA +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGGMRA*RVTSFT
Trigger: TGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 90 bp TGTTCAGTGGAGCTGCTGCTAAGTTCATCACCAGATTCAGAATCTTaGTGTATTCTTTCAGAGCCTTCTCCTGCGGAATCACAAGATTGT +
Preference number: 5 (lower is better)
Translates to: CSVELLLSSSPDSES*CILSEPSPAESQDC
Trigger: ACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATACATCAAGATTCTGAATCTGGTGATGAACTTAGCAGCAGCTCCACTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp TCTATAACTCTTCTGAGATGTCGGAAAAGAATCTGCATTGTGTCTTaGTTTGGCTTTGGCAACTGTCTGATTAGGTCCTTAACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SITLLRCRKRICIVS*FGFGNCLIRSLTAA
Trigger: CGCTGCTGTTAAGGACCTAATCAGACAGTTGCCAAAGCCAAACCAAGACACAATGCAGATTCTTTTCCGACATCTCAGAAGAGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000493008.1
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTGGCCTTCCTTGATTaGGAGGTGTGGTTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILAFLD*EVWLPL
Trigger: TAAGGGCAACCACACCTCCAAATCAAGGAAGGCCAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 90 bp CCAAGTTCTTTCCTGTGTCCCTCTGTTATAGTAATAGCAACGCCCTaGGCTGTCTTTATGAGTTTCCCATTCTCCATTAATCTGAATTGC +
Preference number: 5 (lower is better)
Translates to: PSSFLCPSVIVIATP*AVFMSFPFSINLNC
Trigger: GCAATTCAGATTAATGGAGAATGGGAAACTCATAAAGACAGCTCAGGGCGTTGCTATTACTATAACAGAGGGACACAGGAAAGAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTGGCCTTCCTTGATTaGGAGGTGTGGTTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLAFLD*EVWLPL
Trigger: TAAGGGCAACCACACCTCCAAATCAAGGAAGGCCAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCAATTGTTGCCCCCTaGAGGTCCACTGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISIVAP*RSTVNS
Trigger: AGAGTTCACAGTGGACCTCAAGGGGGCAACAATTGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTTTCACGAACAGCTaGCAAAGTGGGGCGTCGTGT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFFTNS*QSGASC
Trigger: ACACGACGCCCCACTTTGCAAGCTGTTCGTGAAAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp TTCTCTCCATTTTCTATAACTCTTCTGAGATGTCGGAAAAGAATCTaGATTGTGTCTTGGTTTGGCTTTGGCAACTGTCTGATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: FSPFSITLLRCRKRI*IVSWFGFGNCLIRS
Trigger: GGACCTAATCAGACAGTTGCCAAAGCCAAACCAAGACACAATGCAGATTCTTTTCCGACATCTCAGAAGAGTTATAGAAAATGGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000493008.1
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTCATCTGGCTTGACTaGCCACCAGTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFIWLD*PPVIIG
Trigger: ACCAATGATGACTGGTGGCAAGTCAAGCCAGATGAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTTTCGTGGAGTTATTaGGCAGACCAGCTACCTGCT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIFSWSY*ADQLPA
Trigger: AGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGCGGAATCACAAGATaGTTCCTGGGAGAAGCTAGT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICGITR*FLGEAS
Trigger: ACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAGAATCTGGCCTTCCTaGATTTGGAGGTGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPRIWPS*IWRCGC
Trigger: GCAACCACACCTCCAAATCAAGGAAGGCCAGATTCT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATGCTTGAGCCACTCTaGATCCCCTGGATTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIMLEPL*IPWILE
Trigger: TTCCAAAATCCAGGGGATCAAGAGTGGCTCAAGCAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCAATTGTTGCCCCCTaGAGGTCCACTGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSIVAP*RSTVNS
Trigger: AGAGTTCACAGTGGACCTCAAGGGGGCAACAATTGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTTTCACGAACAGCTaGCAAAGTGGGGCGTCGTGT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFFTNS*QSGASC
Trigger: ACACGACGCCCCACTTTGCAAGCTGTTCGTGAAAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGGATCACTGCGAGGTaGCCACTTACTCTGTATATC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIWITAR*PLTLYI
Trigger: GATATACAGAGTAAGTGGCAACCTCGCAGTGATCCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 90 bp AATACAATGGTGCTATGTCTCCACTTTGTTAATACTATTGGTTCTTaGAGCCGCCTGTCCAGGCTCCTACTTTTAATTATTTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: NTMVLCLHFVNTIGS*SRLSRLLLLIISLC
Trigger: GCAAAGAGAAATAATTAAAAGTAGGAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGTGGAGACATAGCACCATTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGCCACCAGTCATCATaGGTCTTTTTCACCAAGATG +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICHQSS*VFFTKM
Trigger: CATCTTGGTGAAAAAGACCAATGATGACTGGTGGCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTCATCTGGCTTGACTaGCCACCAGTCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFIWLD*PPVIIG
Trigger: ACCAATGATGACTGGTGGCAAGTCAAGCCAGATGAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTTTCGTGGAGTTATTaGGCAGACCAGCTACCTGCT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPFSWSY*ADQLPA
Trigger: AGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGCGGAATCACAAGATaGTTCCTGGGAGAAGCTAGT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCGITR*FLGEAS
Trigger: ACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGGATCACTGCGAGGTaGCCACTTACTCTGTATATC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPWITAR*PLTLYI
Trigger: GATATACAGAGTAAGTGGCAACCTCGCAGTGATCCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACACACACACGTACCTaGAAACAAGAAACACAGGAC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITHTRT*KQETQD
Trigger: GTCCTGTGTTTCTTGTTTCAAGGTACGTGTGTGTGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 90 bp CTTCTATTCCACAGGTTGTCTTCAGTAAGAATCAACGTCCGAAGATaGAACTCAGTTCCAGAAGAATTAATTCTACAATCTGATTCTGGT +
Preference number: 5 (lower is better)
Translates to: LLFHRLSSVRINVRR*NSVPEELILQSDSG
Trigger: ACCAGAATCAGATTGTAGAATTAATTCTTCTGGAACTGAGTTCCATCTTCGGACGTTGATTCTTACTGAAGACAACCTGTGGAATAGAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000493008.1
ENST00000497085.1
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCACCTCAATATACACTaGTCCTGGAATAATCTTCCC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIHLNIH*SWNNLP
Trigger: GGGAAGATTATTCCAGGACAAGTGTATATTGAGGTG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATGGCTTTCCGAAACTaGAAAGCTCAGGCAATTTGT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIMAFRN*KAQAIC
Trigger: ACAAATTGCCTGAGCTTTCAAGTTTCGGAAAGCCAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGTTGACAGTCTGACCTaGATTATAACTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIVDSLT*IITGSK
Trigger: TTTGGACCCAGTTATAATCAAGGTCAGACTGTCAAC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTTGATCCCCTGGATTTaGGAAATCTCCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILIPWI*EISFAD
Trigger: ATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACTTTGTTAATACTATaGGTTCTTGCAGCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITLLIL*VLAAAC
Trigger: ACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTACTGCCAAACCAACTaGTGCTACTTCCTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIYCQTN*CYFLEF
Trigger: AAACTCAAGGAAGTAGCACAAGTTGGTTTGGCAGTA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAATCTGCATTGTGTCTaGGTTTGGCTTTGGCAACTG +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPNLHCV*VWLWQL
Trigger: CAGTTGCCAAAGCCAAACCAAGACACAATGCAGATT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACACACACACGTACCTaGAAACAAGAAACACAGGAC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTHTRT*KQETQD
Trigger: GTCCTGTGTTTCTTGTTTCAAGGTACGTGTGTGTGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 90 bp AATAATTTGTGTGTGTGTGTGTTTAAAGTACTTCTTTGCCTCTTCTaGACACGTTTGCATGTGTCAGAATTCCCACTCATTTGCATTAGC +
Preference number: 5 (lower is better)
Translates to: NNLCVCVFKVLLCLF*TRLHVSEFPLICIS
Trigger: GCTAATGCAAATGAGTGGGAATTCTGACACATGCAAACGTGTTCAGAAGAGGCAAAGAAGTACTTTAAACACACACACACACAAATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493008.1
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCACCTCAATATACACTaGTCCTGGAATAATCTTCCC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPHLNIH*SWNNLP
Trigger: GGGAAGATTATTCCAGGACAAGTGTATATTGAGGTG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGATGTACCTCTCCCCTaGTTTTATCACAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIDVPLP*FYHNLS
Trigger: AGAAAGATTGTGATAAAACAAGGGGAGAGGTACATC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATGGCTTTCCGAAACTaGAAAGCTCAGGCAATTTGT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPMAFRN*KAQAIC
Trigger: ACAAATTGCCTGAGCTTTCAAGTTTCGGAAAGCCAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTTGACAGTCTGACCTaGATTATAACTGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVDSLT*IITGSK
Trigger: TTTGGACCCAGTTATAATCAAGGTCAGACTGTCAAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTACCAGATTCAGAATCTaGATGTATTCTTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTITRFRI*MYSFRA
Trigger: GGCTCTGAAAGAATACATCAAGATTCTGAATCTGGT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGGATATTTTCAGTTCTaGAAGGTTAGCATAGACAGG +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIGYFQF*KVSIDR
Trigger: CCTGTCTATGCTAACCTTCAAGAACTGAAAATATCC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTTGATCCCCTGGATTTaGGAAATCTCCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLIPWI*EISFAD
Trigger: ATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATGAAGCATTATACTTaGGCAATTCCCATTCTGACC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIMKHYT*AIPILT
Trigger: GGTCAGAATGGGAATTGCCAAAGTATAATGCTTCAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACTTTGTTAATACTATaGGTTCTTGCAGCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTLLIL*VLAAAC
Trigger: ACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTACTGCCAAACCAACTaGTGCTACTTCCTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPYCQTN*CYFLEF
Trigger: AAACTCAAGGAAGTAGCACAAGTTGGTTTGGCAGTA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGCTGGATTTATCCTTaGAAGCCATCTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICWIYP*KPSQLL
Trigger: CAACAATTGAGATGGCTTCAAAGGATAAATCCAGCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAAGGAACGAAGCTTTTaGGGATCCTTTTGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIKERSF*GSFCSF
Trigger: AAAGGAACAAAAGGATCCCAAAAAGCTTCGTTCCTT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTATAACTTCACAAACTTaGGTACTGTGCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIITSQT*VLCHSL
Trigger: GAGAGAATGGCACAGTACCAAAGTTTGTGAAGTTAT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTCTTCTATTCCACAGGTaGTCTTCAGTAAGAATCAAC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTILLFHR*SSVRIN
Trigger: GTTGATTCTTACTGAAGACAACCTGTGGAATAGAAG...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTAATAAAAAGTGTACGTaGTGGGTGGAGAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTINKKCT*WVEKCW
Trigger: CCAACATTTCTCCACCCACAACGTACACTTTTTATT...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGATGTACCTCTCCCCTaGTTTTATCACAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPDVPLP*FYHNLS
Trigger: AGAAAGATTGTGATAAAACAAGGGGAGAGGTACATC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGTTCACATTTTCTGTaGATCTCTGAAGATGCAAAC +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTICSHFL*ISEDAN
Trigger: GTTTGCATCTTCAGAGATCAACAGAAAATGTGAACA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGAAAGCTCAGGCAATTaGTTCACATTTTCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIESSGN*FTFSVD
Trigger: ATCAACAGAAAATGTGAACAAATTGCCTGAGCTTTC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCACCAGATTCAGAATCTaGATGTATTCTTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPTRFRI*MYSFRA
Trigger: GGCTCTGAAAGAATACATCAAGATTCTGAATCTGGT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGGATATTTTCAGTTCTaGAAGGTTAGCATAGACAGG +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPGYFQF*KVSIDR
Trigger: CCTGTCTATGCTAACCTTCAAGAACTGAAAATATCC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTGTAATATTGTCTACCTaGATCATCAACATGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIVILST*IINMLE
Trigger: CTCAAGCATGTTGATGATCAAGGTAGACAATATTAC...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATGAAGCATTATACTTaGGCAATTCCCATTCTGACC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPMKHYT*AIPILT
Trigger: GGTCAGAATGGGAATTGCCAAAGTATAATGCTTCAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGCTGGATTTATCCTTaGAAGCCATCTCAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCWIYP*KPSQLL
Trigger: CAACAATTGAGATGGCTTCAAAGGATAAATCCAGCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAAGGAACGAAGCTTTTaGGGATCCTTTTGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPKERSF*GSFCSF
Trigger: AAAGGAACAAAAGGATCCCAAAAAGCTTCGTTCCTT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCATAACTTCACAAACTTaGGTACTGTGCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPITSQT*VLCHSL
Trigger: GAGAGAATGGCACAGTACCAAAGTTTGTGAAGTTAT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTCGCTGTCTTGGTTCTaGCTTAATTGCATTAACAAA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTISLSWF*LNCINK
Trigger: TTTGTTAATGCAATTAAGCAAGAACCAAGACAGCGA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCCTTCTATTCCACAGGTaGTCTTCAGTAAGAATCAAC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPLLFHR*SSVRIN
Trigger: GTTGATTCTTACTGAAGACAACCTGTGGAATAGAAG...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCAATAAAAAGTGTACGTaGTGGGTGGAGAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPNKKCT*WVEKCW
Trigger: CCAACATTTCTCCACCCACAACGTACACTTTTTATT...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTTGTAGTGCATGTGCCATTTAGCAAGTCTATTCAGTATTTTTCCAGTACCATTTGGCTTTATGGCTTGTaGGATGAATATAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: LVVHVPFSKSIQYFSSTIWLYGL*DEYSLE
Trigger: TTCTAAGCTATATTCATCCAACAAGCCATAAAGCCA...AATGGTACTGGAAAAATACTGAATAGACTTGCTAAATGGCACATGCACTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGTTCACATTTTCTGTaGATCTCTGAAGATGCAAAC +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPCSHFL*ISEDAN
Trigger: GTTTGCATCTTCAGAGATCAACAGAAAATGTGAACA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGAAAGCTCAGGCAATTaGTTCACATTTTCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPESSGN*FTFSVD
Trigger: ATCAACAGAAAATGTGAACAAATTGCCTGAGCTTTC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCGTAATATTGTCTACCTaGATCATCAACATGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPVILST*IINMLE
Trigger: CTCAAGCATGTTGATGATCAAGGTAGACAATATTAC...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTCGCTGTCTTGGTTCTaGCTTAATTGCATTAACAAA +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPSLSWF*LNCINK
Trigger: TTTGTTAATGCAATTAAGCAAGAACCAAGACAGCGA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS-3UTR CAA 90 bp CTAACTAAAACTCCAGTATATCACAGTGTTTTAAGTAATATTAGTGTGCTGCCCTGGCTTTATGGCTTGTaGGATGAATATAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: LTKTPVYHSVLSNISVLPWLYGL*DEYSLE
Trigger: TTCTAAGCTATATTCATCCAACAAGCCATAAAGCCA...GGGCAGCACACTAATATTACTTAAAACACTGTGATATACTGGAGTTTTAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp GCAGCAGGCGGCTCCCTTCTTAGTCCGCCCCGCGGCTaGGGGTCGACGACGCGAGCCCGAAGAGCGTTCACA +
Preference number: 6 (lower is better)
Translates to: AAGGSLLSPPRG*GSTTRARRAFT
Trigger: TGTGAACGCTCTTCGGGCTCGCGTCGTCGACCCGCAGCCGCGGGGCGGACTAAGAAGGGAGCCGCCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 72 bp GCTCTTGATCCCCTGGATTTTGGAAATCTCCTTTGCTaGTGCTTGCATCCCGAGTCCAACGAGGAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: ALDPLDFGNLLC*CLHPESNEEVS
Trigger: GGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp GGAGTTATTTGGCAGACCAGCTACCTGCTTAACAGGTaGCATGAGAGCTTTGCGCGTGACCTCCTTCACATA +
Preference number: 6 (lower is better)
Translates to: GVIWQTSYLLNR*HESFARDLLHI
Trigger: TATGTGAAGGAGGTCACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCCAAATAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 72 bp ACTCTTGATCCCCTGGATTTTGGAAATCTCCTTTGCTaGTGCTTGCATCCCGAGTCCAACGAGGAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: TLDPLDFGNLLC*CLHPESNEEVS
Trigger: GGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGATCAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS CCA 72 bp GAGAGCTTTGCGCGTGACCTCCTTCACATACTGGGCTaGCACATAAAACGCTTTGGAGTTTTCATCTGGCTT +
Preference number: 6 (lower is better)
Translates to: ESFARDLLHILG*HIKRFGVFIWL
Trigger: AAGCCAGATGAAAACTCCAAAGCGTTTTATGTGCCAGCCCAGTATGTGAAGGAGGTCACGCGCAAAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 90 bp GCTCCCAGGAAGTGGGGGAAGAGCAGACTGGGATATTTTCAGTTCTaGAAGGTTAGCATAGACAGGAGAATCTGGCCTTCCTTGATTTGG +
Preference number: 6 (lower is better)
Translates to: APRKWGKSRLGYFQF*KVSIDRRIWPSLIW
Trigger: CCAAATCAAGGAAGGCCAGATTCTCCTGTCTATGCTAACCTTCAAGAACTGAAAATATCCCAGTCTGCTCTTCCCCCACTTCCTGGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp ATTATTTTCGTGGAGTTATTTGGCAGACCAGCTACCTaGTTAACAGGTGGCATGAGAGCTTTGCGCGTGACC +
Preference number: 6 (lower is better)
Translates to: IIFVELFGRPAT*LTGGMRALRVT
Trigger: GGTCACGCGCAAAGCTCTCATGCCACCTGTTAAGCAGGTAGCTGGTCTGCCAAATAACTCCACGAAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp ATCCCCTGGATTTTGGAAATCTCCTTTGCTGATGCTTaGATCCCGAGTCCAACGAGGAGGTTTCCAAGTTCT +
Preference number: 6 (lower is better)
Translates to: IPWILEISFADA*IPSPTRRFPSS
Trigger: AGAACTTGGAAACCTCCTCGTTGGACTCGGGATGCAAGCATCAGCAAAGGAGATTTCCAAAATCCAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp GTTAGCATAGACAGGAGAATCTGGCCTTCCTTGATTTaGAGGTGTGGTTGCCCTTATCTGTTCAGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: VSIDRRIWPSLI*RCGCPYLFSGA
Trigger: AGCTCCACTGAACAGATAAGGGCAACCACACCTCCAAATCAAGGAAGGCCAGATTCTCCTGTCTATGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp CTCAATTGTTGCCCCCTTGAGGTCCACTGTGAACTCTaGTTTGGACTGATTACTGCCAAACCAACTTGTGCT +
Preference number: 6 (lower is better)
Translates to: LNCCPLEVHCEL*FGLITAKPTCA
Trigger: AGCACAAGTTGGTTTGGCAGTAATCAGTCCAAACCAGAGTTCACAGTGGACCTCAAGGGGGCAACAATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000497103.1
CDS CAA 90 bp TATATAAGGTATGCCCACGTTCATCCAACTCTTCTGACCAACCCCTaGGAGGAGAACCACACTGACTATCTGACTGGCTGTAAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: YIRYAHVHPTLLTNP*EENHTDYLTGCKKC
Trigger: GCACTTCTTACAGCCAGTCAGATAGTCAGTGTGGTTCTCCTCCAAGGGGTTGGTCAGAAGAGTTGGATGAACGTGGGCATACCTTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
CDS CAA 72 bp AAGTGGGGGAAGAGCAGACTGGGATATTTTCAGTTCTaGAAGGTTAGCATAGACAGGAGAATCTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KWGKSRLGYFQF*KVSIDRRIWPS
Trigger: GGAAGGCCAGATTCTCCTGTCTATGCTAACCTTCAAGAACTGAAAATATCCCAGTCTGCTCTTCCCCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 72 bp CCGAGATCCGTCTGCACTGTAGTAATATTGTCTACCTaGATCATCAACATGCTTGAGCCACTCTTGATCCCC +
Preference number: 6 (lower is better)
Translates to: PRSVCTVVILST*IINMLEPLLIP
Trigger: GGGGATCAAGAGTGGCTCAAGCATGTTGATGATCAAGGTAGACAATATTACTACAGTGCAGACGGATCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311380.8
ENST00000375245.8
CDS TCA 72 bp GTTTTCTCTACATCCAAGAACTCTGGACCGGGAAAATaGCCAAATGAGCGTGTCCTATTCTGGCTGGAAACT +
Preference number: 6 (lower is better)
Translates to: VFSTSKNSGPGK*PNERVLFWLET
Trigger: AGTTTCCAGCCAGAATAGGACACGCTCATTTGGTCATTTTCCCGGTCCAGAGTTCTTGGATGTAGAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp CTGGGCTGGCACATAAAACGCTTTGGAGTTTTCATCTaGCTTGACTTGCCACCAGTCATCATTGGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: LGWHIKRFGVFI*LDLPPVIIGLF
Trigger: AAAAAGACCAATGATGACTGGTGGCAAGTCAAGCCAGATGAAAACTCCAAAGCGTTTTATGTGCCAGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp TCAGAGCCTTCTCCTGCGGAATCACAAGATTGTTCCTaGGAGAAGCTAGTTTTCTCTACATCCAAGAACTCT +
Preference number: 6 (lower is better)
Translates to: SEPSPAESQDCS*EKLVFSTSKNS
Trigger: AGAGTTCTTGGATGTAGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 72 bp GGAGCTGCTGCTAAGTTCATCACCAGATTCAGAATCTaGATGTATTCTTTCAGAGCCTTCTCCTGCGGAATC +
Preference number: 6 (lower is better)
Translates to: GAAAKFITRFRI*MYSFRAFSCGI
Trigger: GATTCCGCAGGAGAAGGCTCTGAAAGAATACATCAAGATTCTGAATCTGGTGATGAACTTAGCAGCAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 90 bp CTGTTCAGTGGAGCTGCTGCTAAGTTCATCACCAGATTCAGAATCTaGATGTATTCTTTCAGAGCCTTCTCCTGCGGAATCACAAGATTG +
Preference number: 6 (lower is better)
Translates to: LFSGAAAKFITRFRI*MYSFRAFSCGITRL
Trigger: CAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATACATCAAGATTCTGAATCTGGTGATGAACTTAGCAGCAGCTCCACTGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 72 bp GAGCTGCTGCTAAGTTCATCACCAGATTCAGAATCTTaGTGTATTCTTTCAGAGCCTTCTCCTGCGGAATCA +
Preference number: 6 (lower is better)
Translates to: ELLLSSSPDSES*CILSEPSPAES
Trigger: TGATTCCGCAGGAGAAGGCTCTGAAAGAATACATCAAGATTCTGAATCTGGTGATGAACTTAGCAGCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp TTTCAGTTCTTGAAGGTTAGCATAGACAGGAGAATCTaGCCTTCCTTGATTTGGAGGTGTGGTTGCCCTTAT +
Preference number: 6 (lower is better)
Translates to: FQFLKVSIDRRI*PSLIWRCGCPY
Trigger: ATAAGGGCAACCACACCTCCAAATCAAGGAAGGCCAGATTCTCCTGTCTATGCTAACCTTCAAGAACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 72 bp ATACAATGGTGCTATGTCTCCACTTTGTTAATACTATaGGTTCTTGCAGCCGCCTGTCCAGGCTCCTACTTT +
Preference number: 6 (lower is better)
Translates to: IQWCYVSTLLIL*VLAAACPGSYF
Trigger: AAAGTAGGAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGTGGAGACATAGCACCATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
ENST00000497103.1
CDS CAA 90 bp ATCTTGATGTATTCTTTCAGAGCCTTCTCCTGCGGAATCACAAGATaGTTCCTGGGAGAAGCTAGTTTTCTCTACATCCAAGAACTCTGG +
Preference number: 6 (lower is better)
Translates to: ILMYSFRAFSCGITR*FLGEASFLYIQELW
Trigger: CCAGAGTTCTTGGATGTAGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATACATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 72 bp ACTTTCCGTTATTATGGGTCAGGTCCAGGCTTAGGTTaGCAGTCTGACCTTGATTATAACTGGGTCCAAAAT +
Preference number: 6 (lower is better)
Translates to: TFRYYGSGPGLG*QSDLDYNWVQN
Trigger: ATTTTGGACCCAGTTATAATCAAGGTCAGACTGTCAACCTAAGCCTGGACCTGACCCATAATAACGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp GAGAACCACACTGACTATCTGACTGGCTGTAAGAAGTaGTGTAGTAGTTTTCTTCCGATGAAAGAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: ENHTDYLTGCKK*CSSFLPMKEAL
Trigger: AAGAGCTTCTTTCATCGGAAGAAAACTACTACAGCACTTCTTACAGCCAGTCAGATAGTCAGTGTGGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp TTCTTTATACAGACTGTGTTACATTTCTTGGTGATCTaGCTTCCCCTAATTGGGCTGGAGTACTCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: FFIQTVLHFLVI*LPLIGLEYSGS
Trigger: ACTACCTGAGTACTCCAGCCCAATTAGGGGAAGGCAGATCACCAAGAAATGTAACACAGTCTGTATAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492028.5
CDS CCA 72 bp CTTCTGAGATGTCGGAAAAGAATCTGCATTGTGTCTTaGTTTGGCTTTGGCAACTGTCTGATTAGGTCCTTA +
Preference number: 6 (lower is better)
Translates to: LLRCRKRICIVS*FGFGNCLIRSL
Trigger: TAAGGACCTAATCAGACAGTTGCCAAAGCCAAACCAAGACACAATGCAGATTCTTTTCCGACATCTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000493008.1
CDS CAA 72 bp TATTCTTTCAGAGCCTTCTCCTGCGGAATCACAAGATaGTTCCTGGGAGAAGCTAGTTTTCTCTACATCCAA +
Preference number: 6 (lower is better)
Translates to: YSFRAFSCGITR*FLGEASFLYIQ
Trigger: TTGGATGTAGAGAAAACTAGCTTCTCCCAGGAACAATCTTGTGATTCCGCAGGAGAAGGCTCTGAAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS TCA 72 bp TTCCTGTGTCCCTCTGTTATAGTAATAGCAACGCCCTaGGCTGTCTTTATGAGTTTCCCATTCTCCATTAAT +
Preference number: 6 (lower is better)
Translates to: FLCPSVIVIATP*AVFMSFPFSIN
Trigger: ATTAATGGAGAATGGGAAACTCATAAAGACAGCTCAGGGCGTTGCTATTACTATAACAGAGGGACACAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS GCA 72 bp GTGCTATGTCTCCACTTTGTTAATACTATTGGTTCTTaGAGCCGCCTGTCCAGGCTCCTACTTTTAATTATT +
Preference number: 6 (lower is better)
Translates to: VLCLHFVNTIGS*SRLSRLLLLII
Trigger: AATAATTAAAAGTAGGAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGTGGAGACATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
CDS CAA 72 bp CCGAGATCCGTCTGCACTGTAGTAATATTGTCTACCTaGATCATCAACATGCTTGAGCCACTTTTCATTAGT +
Preference number: 6 (lower is better)
Translates to: PRSVCTVVILST*IINMLEPLFIS
Trigger: ACTAATGAAAAGTGGCTCAAGCATGTTGATGATCAAGGTAGACAATATTACTACAGTGCAGACGGATCTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375250.9
ENST00000396144.8
ENST00000454919.1
CDS TCA 72 bp TGTGTGTGTGTGTTTAAAGTACTTCTTTGCCTCTTCTaGACACGTTTGCATGTGTCAGAATTCCCACTCATT +
Preference number: 6 (lower is better)
Translates to: CVCVFKVLLCLF*TRLHVSEFPLI
Trigger: AATGAGTGGGAATTCTGACACATGCAAACGTGTTCAGAAGAGGCAAAGAAGTACTTTAAACACACACACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493008.1
CDS CAA 90 bp TATAAACATTTGAAATCTGATGGAATCCAGCTTCTATTCCACAGGTaGTCTTCAGTAAGAATCAACGTCCGAAGATGGAACTCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: YKHLKSDGIQLLFHR*SSVRINVRRWNSVP
Trigger: TGGAACTGAGTTCCATCTTCGGACGTTGATTCTTACTGAAGACAACCTGTGGAATAGAAGCTGGATTCCATCAGATTTCAAATGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
ENST00000492028.5
ENST00000493008.1
ENST00000497085.1
CDS CAA 72 bp TTGTTACATTTAATAATCCATATTTCTCTTGATCCTTaGGACTGCTGGCTGTATCTTGGTGCTTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LLHLIIHISLDP*DCWLYLGALVR
Trigger: CCTCACCAAAGCACCAAGATACAGCCAGCAGTCCAAAGGATCAAGAGAAATATGGATTATTAAATGTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344936.7
ENST00000375245.8
CDS CAA 90 bp GTCCTTTGCTTCATATTCATAATCATATTCCACCTCAATATACACTaGTCCTGGAATAATCTTCCCACTTCTGTCAGCCATTTTCATTCA +
Preference number: 6 (lower is better)
Translates to: VLCFIFIIIFHLNIH*SWNNLPTSVSHFHS
Trigger: TGAATGAAAATGGCTGACAGAAGTGGGAAGATTATTCCAGGACAAGTGTATATTGAGGTGGAATATGATTATGAATATGAAGCAAAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 90 bp CCAAGATGTACCTCTCCCCTTGTTTTATCACAATCTTTCTGTCCTTaGCTTCATATTCATAATCATATTCCACCTCAATATACACTTGTC +
Preference number: 6 (lower is better)
Translates to: PRCTSPLVLSQSFCP*LHIHNHIPPQYTLV
Trigger: GACAAGTGTATATTGAGGTGGAATATGATTATGAATATGAAGCAAAGGACAGAAAGATTGTGATAAAACAAGGGGAGAGGTACATCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CCA 72 bp TTCATAATCATATTCCACCTCAATATACACTTGTCCTaGAATAATCTTCCCACTTCTGTCAGCCATTTTCAT +
Preference number: 6 (lower is better)
Translates to: FIIIFHLNIHLS*NNLPTSVSHFH
Trigger: ATGAAAATGGCTGACAGAAGTGGGAAGATTATTCCAGGACAAGTGTATATTGAGGTGGAATATGATTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 72 bp AAAGGATGTTATACCACATTATGGCTTTATGGCTTGTaGGATGAATATAGCTTAGAACAAGGAGATCTACAC +
Preference number: 6 (lower is better)
Translates to: KGCYTTLWLYGL*DEYSLEQGDLH
Trigger: GTGTAGATCTCCTTGTTCTAAGCTATATTCATCCAACAAGCCATAAAGCCATAATGTGGTATAACATCCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8
CDS CAA 72 bp ACCTCTCCCCTTGTTTTATCACAATCTTTCTGTCCTTaGCTTCATATTCATAATCATATTCCACCTCAATAT +
Preference number: 6 (lower is better)
Translates to: TSPLVLSQSFCP*LHIHNHIPPQY
Trigger: ATATTGAGGTGGAATATGATTATGAATATGAAGCAAAGGACAGAAAGATTGTGATAAAACAAGGGGAGAGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311380.8
ENST00000344936.7
ENST00000375245.8
ENST00000375250.9
ENST00000396144.8