RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARGLU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134884

Ensembl transcript IDs: ENST00000360629.3, ENST00000375926.5, ENST00000400198.8, ENST00000472226.2

Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTACCTGTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTaGTTTAACAATACACCACATAGGTCCAGTAATACCCTGGGAATT +
Preference number: 1 (lower is better)
Translates to: LPVSGTSRATVSQGH*FNNTPHRSSNTLGI
Trigger: AATTCCCAGGGTATTACTGGACCTATGTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATACAGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR GCA 90 bp AACAATTTCAACATCTCACTGGAGTCTCCAAAAGCAAGCAGATACTaGAGGATGTCATTAAGCAACTTACTGTCACTTCACACCATATGT +
Preference number: 1 (lower is better)
Translates to: NNFNISLESPKASRY*RMSLSNLLSLHTIC
Trigger: ACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAGTGAGATGTTGAAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR TCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACAAGCTAAGTTCTTTCTaGTGGCCCACTCTGAAAACG +
Preference number: 2 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYKLSSF*WPTLKT
Trigger: CGTTTTCAGAGTGGGCCATCAGAAAGAACTTAGCTT...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR CCA 90 bp TATATATACTTTGTATCAGAGTTGACCAACTGTTTCCTTACCTGTATCAGGAACGGTCCAGTAATACCCTaGGAATTTCCCAATGCAATC +
Preference number: 2 (lower is better)
Translates to: YIYFVSELTNCFLTCIRNGPVIP*EFPNAI
Trigger: GATTGCATTGGGAAATTCCCAGGGTATTACTGGACC...GTTCCTGATACAGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTATATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR TCA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACAGCAAAACCAGCATTATaGTGTAGCAAACAGAGTATA +
Preference number: 2 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTAKPAL*CSKQSI
Trigger: TATACTCTGTTTGCTACATCATAATGCTGGTTTTGC...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR CAA 90 bp ATGAACAGAGACAATACTGAACTGTATATATACTTTGTATCAGAGTaGACCAACTGTTTCCTTACCTGTATCAGGAACATCAAGAGCAAC +
Preference number: 2 (lower is better)
Translates to: MNRDNTELYIYFVSE*TNCFLTCIRNIKSN
Trigger: GTTGCTCTTGATGTTCCTGATACAGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTATATATACAGTTCAGTATTGTCTCTGTTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR TCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAAACTTTGTATCAGAGTTaGCCAACTGTTTCCTTACCT +
Preference number: 2 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKTLYQS*PTVSLP
Trigger: AGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGT...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR CCA 90 bp TATATATACTTTGTATCAGAGTTGACCAACTGTTTCCTTACCTGTATCAGGAACGTATCACAAGGACACTaGTTTAACAATACACCACAT +
Preference number: 2 (lower is better)
Translates to: YIYFVSELTNCFLTCIRNVSQGH*FNNTPH
Trigger: ATGTGGTGTATTGTTAAACCAGTGTCCTTGTGATAC...GTTCCTGATACAGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTATATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR CCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAACACAATGGGGAATGCTaGTTTGATTTTGTCAATGAA +
Preference number: 2 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKHNGEC*FDFVNE
Trigger: TTCATTGACAAAATCAAACCAGCATTCCCCATTGTG...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR CCA 72 bp TCAGGAACATCAAGAGCAACAGTATCACAAGGACACTaGTTTAACAATACACCACATAGGTCCAGTAATACC +
Preference number: 3 (lower is better)
Translates to: SGTSRATVSQGH*FNNTPHRSSNT
Trigger: GGTATTACTGGACCTATGTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR CCA 72 bp GGTTTAACAATACACCACATAGGTCCAGTAATACCCTaGGAATTTCCCAATGCAATCACCAACTTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: GLTIHHIGPVIP*EFPNAITNFFF
Trigger: AAAGAAAAAGTTGGTGATTGCATTGGGAAATTCCCAGGGTATTACTGGACCTATGTGGTGTATTGTTAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
3UTR-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATACTTTGTATCAGAGTaGACCAACTGTTTCCTTACC +
Preference number: 3 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKYFVSE*TNCFLT
Trigger: GGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGGCCCGAAGATGTCGATaGGGTCGGGCGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLARRCR*GRAGTR
Trigger: CCTCGTCCCCGCCCGACCGCATCGACATCTTCGGGC...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGCCCGGCGTCTACAGCTaGCACGAAGGCCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLPGVYS*HEGRLQ
Trigger: TTGGAGGCGGCCTTCGTGGCAGCTGTAGACGCCGGG...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACGCGACCGGGACCGGCTaGGCTTCTTGTTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHATGTG*ASCCAC
Trigger: GCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGC...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACAACACGGCCGTGTTGGTaGAGCGCGAACGGGACCGCG +
Preference number: 4 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTTRPCW*SANGTA
Trigger: CGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGT...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCAGGCTGCTGCGCTTaGTCACCGTGCGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTPGCCA*SPCARR
Trigger: TCTTCGGGCGCACGGTGAGCAAGCGCAGCAGCCTGG...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGTCCTCCTCTCGCTTCTaGTTCTCGTCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLSSSRF*FSSRLL
Trigger: CAGCAGCCTGGACGAGAAGCAGAAGCGAGAGGAGGA...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TATATATACTTTGTATCAGAGTTGACCAACTGTTTCCTTACCTGTATCAGGAACCCTTCGGACGCGGGCTaGCGGTTCTACCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: YIYFVSELTNCFLTCIRNPSDAG*RFYRGR
Trigger: CCGGCCTCGGTAGAACCGCCAGCCCGCGTCCGAAGG...GTTCCTGATACAGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTATATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGTGTGCTTGCTGCTCTTaGTGTGCTTGGAGCGGGACG +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLCACCS*CAWSGT
Trigger: CGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACA...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACGCTTCTCGTCCAGGCTaGTGCGCTTGCTCACCGTGC +
Preference number: 4 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYASRPG*CACSPC
Trigger: GCACGGTGAGCAAGCGCAGCAGCCTGGACGAGAAGC...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAAGGGACACGGCCGTGTTaGTGGAGCGCGAACGGGACC +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKGTRPC*WSANGT
Trigger: GGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCC...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGCTGCGCTTCTTGTTGTaGTTGCTGCTCTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLLRFLL*LLLLVC
Trigger: GCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAG...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATCTCGTCCAGGCTGCTaGGCTTGCTCACCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKSRPGC*ACSPCA
Trigger: GGCGCACGGTGAGCAAGCGCAGCAGCCTGGACGAGA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TATATATACTTTGTATCAGAGTTGACCAACTGTTTCCTTACCTGTATCAGGAACTGCTCTTGGTGTGCTTaGAGCGGGACGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YIYFVSELTNCFLTCIRNCSWCA*SGTSSG
Trigger: GCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCA...GTTCCTGATACAGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGTATATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACGCTTCTTGTTGTGCTTaGTGCTCTTGGTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHASCCA*CSWCAW
Trigger: CCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGC...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATGCGCTTGCTCACCGTaGGCCCGAAGATGTCGATGC +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKCACSP*ARRCRC
Trigger: GCATCGACATCTTCGGGCGCACGGTGAGCAAGCGCA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATTGCTGCTCTTGGTGTaGTTGGAGCGGGACGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKLLLLV*LERDEL
Trigger: GAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACGCAACTGCTTTTCCATaGTGCGTTTGGCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYATAFP*CVWLPP
Trigger: TGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGC...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAAAGGACAGTTTTGGCCTaGACTTCCCCTTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKRTVLA*TSPCPG
Trigger: TCCTGGGCAAGGGGAAGTCCAGGCCAAAACTGTCCT...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGACTTTGTATCAGAGTTaGCCAACTGTTTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLTLYQS*PTVSLP
Trigger: AGGTAAGGAAACAGTTGGTCAACTCTGATACAAAGT...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACTCTGATGGCCCACTCTaGAAACGATCTCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYSDGPL*KRSQIP
Trigger: TGGAATCTGAGATCGTTTTCAGAGTGGGCCATCAGA...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAAGGCCAACGGACTTTATaGCTTTTCCCGGCGTCTACA +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKGQRTL*LFPAST
Trigger: TGTAGACGCCGGGAAAAGGCATAAAGTCCGTTGGCC...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATACTTTCCCGAGATTTaGAACGCTTCCGCACGCGCT +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKYFPEI*NASARA
Trigger: AGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACAGGCCAGTTTGGCTTGTaGTTCTGCAATTTTTCGGTT +
Preference number: 4 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTGQFGL*FCNFSV
Trigger: AACCGAAAAATTGCAGAAGCACAAGCCAAACTGGCC...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACAAAGCAAGCAGATACTaGAGGATGTCATTAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHKASRY*RMSLSN
Trigger: GTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTT...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGCACAATGGGGAATGCTaGTTTGATTTTGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LESPKASRYCRMSLSNLLHNGEC*FDFVNE
Trigger: TTCATTGACAAAATCAAACCAGCATTCCCCATTGTG...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAACTCTCTAGCTTTTTGTaGGGCAAGCTCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKLSSFL*GKLSLS
Trigger: AGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAG...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCACTCTTTCCCATAGCCTaGCAGAGGAAAGTAGTTACC +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPLFPIA*QRKVVT
Trigger: GGTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAG...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCAGTTCTTCGGCCAGTTTaGCTTGTGCTTCTGCAATTT +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPVLRPV*LVLLQF
Trigger: AAATTGCAGAAGCACAAGCCAAACTGGCCGAAGAAC...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAAGGTCCAGTAATACCCTaGGAATTTCCCAATGCAATC +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKGPVIP*EFPNAI
Trigger: GATTGCATTGGGAAATTCCCAGGGTATTACTGGACC...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACCAGCACATTAAAGACTaGATGGTGTATATTATTCAC +
Preference number: 4 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHQHIKD*MVYIIH
Trigger: GTGAATAATATACACCATCCAGTCTTTAATGTGCTG...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACGCAAAACCAGCATTATaGTGTAGCAAACAGAGTATA +
Preference number: 4 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYAKPAL*CSKQSI
Trigger: TATACTCTGTTTGCTACATCATAATGCTGGTTTTGC...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCAAGTTCTTCGAGCAACTaGTTTTCCATGATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPSSSSN*FSMMRL
Trigger: CAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACT...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCATTGACCATCAAAAAGTaGACCACCCTCTTTAAGACT +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPLTIKK*TTLFKT
Trigger: AGTCTTAAAGAGGGTGGTTCACTTTTTGATGGTCAA...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACTTTTCTTCTATTTCTTaGTGTCGAATTTTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYFSSIS*CRIFRC
Trigger: GCAGCGAAAAATTCGACAGCAAGAAATAGAAGAAAA...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR TCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCAAGACTTCTAAATGGTTaGCCATCAAAAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPRLLNG*PSKSEP
Trigger: TGGTTCACTTTTTGATGGTCAACCATTTAGAAGTCT...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CCA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCAGTATCACAAGGACACTaGTTTAACAATACACCACAT +
Preference number: 4 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPVSQGH*FNNTPH
Trigger: ATGTGGTGTATTGTTAAACCAGTGTCCTTGTGATAC...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR GCA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATTACACAATGGGGAATaGTGGTTTGATTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKLHNGE*WFDFVN
Trigger: ATTGACAAAATCAAACCAGCATTCCCCATTGTGTAA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS CCA 90 bp ACGAGGCGCGCTCCCGGTCCCGCTCGCGCCGGGACACGGCCGTGTTaGTGGAGCGCGAACGGGACCGCGACTCCCGCCGCCGGTTCCGTT +
Preference number: 5 (lower is better)
Translates to: TRRAPGPARAGTRPC*WSANGTATPAAGSV
Trigger: AACGGAACCGGCGGCGGGAGTCGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCCGGCGCGAGCGGGACCGGGAGCGCGCCTCGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 90 bp AGGCGCGCTCCCGGTCCCGCTCGCGCCGGGACACGGCCGTGTTGGTaGAGCGCGAACGGGACCGCGACTCCCGCCGCCGGTTCCGTTTAC +
Preference number: 5 (lower is better)
Translates to: RRAPGPARAGTRPCW*SANGTATPAAGSVY
Trigger: GTAAACGGAACCGGCGGCGGGAGTCGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCCGGCGCGAGCGGGACCGGGAGCGCGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 90 bp CCCTCACGCGGCCAGTTCCCCTCGCCTCCGCCTTCGGACGCGGGCTaGCGGTTCTACCGAGGCCGGAGGAAAGAAAGGTGTCGGCCAACG +
Preference number: 5 (lower is better)
Translates to: PSRGQFPSPPPSDAG*RFYRGRRKERCRPT
Trigger: CGTTGGCCGACACCTTTCTTTCCTCCGGCCTCGGTAGAACCGCCAGCCCGCGTCCGAAGGCGGAGGCGAGGGGAACTGGCCGCGTGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp CCTCTCGCTTCTGCTTCTCGTCCAGGCTGCTGCGCTTGCTCACCGTaGGCCCGAAGATGTCGATGCGGTCGGGCGGGGACGAGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: PLASASRPGCCACSP*ARRCRCGRAGTRRA
Trigger: AGCGCGCCTCGTCCCCGCCCGACCGCATCGACATCTTCGGGCGCACGGTGAGCAAGCGCAGCAGCCTGGACGAGAAGCAGAAGCGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 90 bp GGGACCGCGACTCCCGCCGCCGGTTCCGTTTACTTTCCCGAGATTTaGAACGCTTCCGCACGCGCTCCTTGTCCCGGGATCGCGACCGGG +
Preference number: 5 (lower is better)
Translates to: GTATPAAGSVYFPEI*NASARAPCPGIATG
Trigger: CCCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAAACGGAACCGGCGGCGGGAGTCGCGGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp TGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTGCTTaGTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTCCGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CPGIATGTGCASCCA*CSWCAWSGTSSGSE
Trigger: CTCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp GCTTCCGCACGCGCTCCTTGTCCCGGGATCGCGACCGGGACCGGCTaGGCTTCTTGTTGTGCTTGCTGCTCTTGGTGTGCTTGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: ASARAPCPGIATGTG*ASCCACCSWCAWSG
Trigger: CCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp TCCTTGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTaGTTGCTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SLSRDRDRDRLRFLL*LLLLVCLERDELRL
Trigger: GAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp AGGTGTCGGCCAACGGACTTTATGCCTTTTCCCGGCGTCTACAGCTaGCACGAAGGCCGCCTCCAACGAGAAACCCGTAGCGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RCRPTDFMPFPGVYS*HEGRLQRETRSARR
Trigger: GCGCCTGGCGCTACGGGTTTCTCGTTGGAGGCGGCCTTCGTGGCAGCTGTAGACGCCGGGAAAAGGCATAAAGTCCGTTGGCCGACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp TCTACCGAGGCCGGAGGAAAGAAAGGTGTCGGCCAACGGACTTTATaGCTTTTCCCGGCGTCTACAGCTGCCACGAAGGCCGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: STEAGGKKGVGQRTL*LFPASTAATKAASN
Trigger: GTTGGAGGCGGCCTTCGTGGCAGCTGTAGACGCCGGGAAAAGGCATAAAGTCCGTTGGCCGACACCTTTCTTTCCTCCGGCCTCGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp GCGGCAAGCTCAGCTTGTCTCTGTCGCTCGAGTTCTTCGAGCAACTaGTTTTCCATGATGCGTTTGGCTTCCTCCACCCTTCGGAGAACT +
Preference number: 5 (lower is better)
Translates to: AASSACLCRSSSSSN*FSMMRLASSTLRRT
Trigger: AGTTCTCCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS-3UTR CAA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGCTGCTCTTGGTGTGCTaGGAGCGGGACGAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LESPKASRYCRMSLSNLLLLLVC*ERDELR
Trigger: CCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAG...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS TCA 90 bp CAGCTTGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATaGTGCGTTTGGCTTCCTCCACCCTTCGGAGAACTTCTCGTTCAA +
Preference number: 5 (lower is better)
Translates to: QLVSVARVLRATAFP*CVWLPPPFGELLVQ
Trigger: TTGAACGAGAAGTTCTCCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS GCA 90 bp GTCTCTACTTTCCAAACGACCGAGCGTTACCTCTCTAGCTTTTTGTaGGGCAAGCTCAGCTTGTCTCTGTCGCTCGAGTTCTTCGAGCAA +
Preference number: 5 (lower is better)
Translates to: VSTFQTTERYLSSFL*GKLSLSLSLEFFEQ
Trigger: TTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACGCTCGGTCGTTTGGAAAGTAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CCA 90 bp TCTGAACTGAGCAGGAGGCAGAACCCAACACTGAAAGTTTTGCCATaGACTGTCTCTACTTTCCAAACGACCGAGCGTTACCTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: SELSRRQNPTLKVLP*TVSTFQTTERYLSS
Trigger: GCTAGAGAGGTAACGCTCGGTCGTTTGGAAAGTAGAGACAGTCCATGGCAAAACTTTCAGTGTTGGGTTCTGCCTCCTGCTCAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS-3UTR CAA 90 bp TTTGTCCTAAAAATAAACGTGCAAGTACACTACACAATGAAAATGACTCGACCATTCCGCACGCGCTCCTaGTCCCGGGATCGCGACCGG +
Preference number: 5 (lower is better)
Translates to: FVLKINVQVHYTMKMTRPFRTRS*SRDRDR
Trigger: CCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAA...TGGTCGAGTCATTTTCATTGTGTAGTGTACTTGCACGTTTATTTTTAGGACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATCCAGGCTGCTGCGCTaGCTCACCGTGCGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKSRLLR*LTVRPK
Trigger: CTTCGGGCGCACGGTGAGCAAGCGCAGCAGCCTGGA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGATGAGAAGGACAGTTTaGGCCTGGACTTCCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LESPKASRYCRMSLSNLLMRRTV*AWTSPC
Trigger: GCAAGGGGAAGTCCAGGCCAAAACTGTCCTTCTCAT...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGCTCCTCTCTAGCTTTTaGTGCGGCAAGCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LESPKASRYCRMSLSNLLLLSSF*CGKLSL
Trigger: CAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGAG...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACATGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTCGKLS*SLSLEF
Trigger: GAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCA...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACATTGTGCTTGCTGCTCTaGGTGTGCTTGGAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTLCLLL*VCLERD
Trigger: GTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAA...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACCGCTTCTTGTTGTGCTaGCTGCTCTTGGTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHRFLLC*LLLVCL
Trigger: CAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCG...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp TATTATTCACAATTACATCCTCTTTCCCATAGCCTGGCAGAGGAAAGTAGTTACCGGCTGCGCTTCTTGTaGTGCTTGCTGCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: YYSQLHPLSHSLAEESSYRLRFL*CLLLLV
Trigger: CACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCG...GTAACTACTTTCCTCTGCCAGGCTATGGGAAAGAGGATGTAATTGTGAATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp CTGGAGTCTCCAAAAGCAAGCAGATACTGCAGGATGTCATTAAGCAACTTACTGTGTTCTTCGGCCAGTTaGGCTTGTGCTTCTGCAATT +
Preference number: 5 (lower is better)
Translates to: LESPKASRYCRMSLSNLLCSSAS*ACASAI
Trigger: AATTGCAGAAGCACAAGCCAAACTGGCCGAAGAACA...CAGTAAGTTGCTTAATGACATCCTGCAGTATCTGCTTGCTTTTGGAGACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS GCA 90 bp TTAAAAGTTGAATATTTACTGTCTTGTCCAGTGTCCTGCAGAGTGTaGTCCTCGGCTGCCATACGCGCCAGCTTCCTCTTTAAAATGATT +
Preference number: 5 (lower is better)
Translates to: LKVEYLLSCPVSCRV*SSAAIRASFLFKMI
Trigger: AATCATTTTAAAGAGGAAGCTGGCGCGTATGGCAGCCGAGGAGCACACTCTGCAGGACACTGGACAAGACAGTAAATATTCAACTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS-3UTR CAA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACTAGCTCCTCACGTTTaGCACGTTCTTCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTLAPHV*HVLPPL
Trigger: GAGAGGAGGAAGAACGTGCAAAACGTGAGGAGCTAG...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATTACTTTCCCGAGATTaGGAACGCTTCCGCACGCGC +
Preference number: 5 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKLLSRD*ERFRTR
Trigger: GCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS GCA 90 bp CAGTTCTTCCTCCACCCTTTTTGCTACCAATTCTTCTACTCTTCGTaGTGTTTCTTCCTCGATGAGTTTTTCTTCTATTTCTTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: QFFLHPFCYQFFYSS*CFFLDEFFFYFLLS
Trigger: CGACAGCAAGAAATAGAAGAAAAACTCATCGAGGAAGAAACAGCACGAAGAGTAGAAGAATTGGTAGCAAAAAGGGTGGAGGAAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATTTTCCATGATGCGTTaGGCTTCCTCCACCCTTCGG +
Preference number: 5 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKFSMMR*ASSTLR
Trigger: CCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS TCA 90 bp CTACGGGCTTCTTCCATGGGGAAAATGGACTTAACATTCAGATGTTaGCAATTTCGGAAGGCAGCTTATATTGTCATCTACAATCTGAAC +
Preference number: 5 (lower is better)
Translates to: LRASSMGKMDLTFRC*QFRKAAYIVIYNLN
Trigger: GTTCAGATTGTAGATGACAATATAAGCTGCCTTCCGAAATTGTCAACATCTGAATGTTAAGTCCATTTTCCCCATGGAAGAAGCCCGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS GCA 90 bp ATTATGCAAACTATGGTGACAGACACTCAGGGCTGTAAAGTAATTTaGCTTGAGTGTTTCAGTGACTTTCACCAAGTTTTTGGATCCTGG +
Preference number: 5 (lower is better)
Translates to: IMQTMVTDTQGCKVI*LECFSDFHQVFGSW
Trigger: CCAGGATCCAAAAACTTGGTGAAAGTCACTGAAACACTCAAGGCAAATTACTTTACAGCCCTGAGTGTCTGTCACCATAGTTTGCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAATTCGGCCAGTTTGGCTaGTGCTTCTGCAATTTTTCG +
Preference number: 5 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKFGQFG*CFCNFS
Trigger: CGAAAAATTGCAGAAGCACAAGCCAAACTGGCCGAA...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp CAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACACCACTTGTTCTTCTTTTTGTaGACGTTGTCGTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: QEHQEQQYHKDTGLTIHHLFFFL*TLSFLF
Trigger: GAACAAGAACGACAACGTCAACAAAAAGAAGAACAA...GTGGTGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS TCA 90 bp ACCTACGTATTCTTTACCTATACTCCTTTAATCAGCATTAAAAGTTaGATATTTACTGTCTTGTCCAGTGTCCTGCAGAGTGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TYVFFTYTPLISIKS*IFTVLSSVLQSVLL
Trigger: GAGGAGCACACTCTGCAGGACACTGGACAAGACAGTAAATATTCAACTTTTAATGCTGATTAAAGGAGTATAGGTAAAGAATACGTAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS-3UTR CAA 90 bp GTATCAGGAACATCAAGAGCAACAGTATCACAAGGACACTGGTTTAACAATACAGCCCAGGATAATTTTTaGTTCTTCTTTTTGTTGACG +
Preference number: 5 (lower is better)
Translates to: VSGTSRATVSQGHWFNNTAQDNF*FFFLLT
Trigger: CGTCAACAAAAAGAAGAACAAAAAATTATCCTGGGC...TGTATTGTTAAACCAGTGTCCTTGTGATACTGTTGCTCTTGATGTTCCTGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS-3UTR CAA 90 bp TCATTAAGCAACTTACTGTCACTTCACACCATATGTGGCAGTAAGAAACTTAAACCACAATTAGACTCATaGAAGAGCTCAAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: SLSNLLSLHTICGSKKLKPQLDS*KSSKLK
Trigger: CTTTAGTTTTGAGCTCTTCAATGAGTCTAATTGTGG...TTTAAGTTTCTTACTGCCACATATGGTGTGAAGTGACAGTAAGTTGCTTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS CCA 72 bp CCCGGTCCCGCTCGCGCCGGGACACGGCCGTGTTGGTaGAGCGCGAACGGGACCGCGACTCCCGCCGCCGGT +
Preference number: 6 (lower is better)
Translates to: PGPARAGTRPCW*SANGTATPAAG
Trigger: ACCGGCGGCGGGAGTCGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCCGGCGCGAGCGGGACCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 72 bp GCTCCCGGTCCCGCTCGCGCCGGGACACGGCCGTGTTaGTGGAGCGCGAACGGGACCGCGACTCCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: APGPARAGTRPC*WSANGTATPAA
Trigger: GGCGGCGGGAGTCGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCCGGCGCGAGCGGGACCGGGAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp GACGAGGCGCGCTCCCGGTCCCGCTCGCGCCGGGACACGGCCGTGTaGGTGGAGCGCGAACGGGACCGCGACTCCCGCCGCCGGTTCCGT +
Preference number: 6 (lower is better)
Translates to: DEARSRSRSRRDTAV*VERERDRDSRRRFR
Trigger: ACGGAACCGGCGGCGGGAGTCGCGGTCCCGTTCGCGCTCCACCAACACGGCCGTGTCCCGGCGCGAGCGGGACCGGGAGCGCGCCTCGTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp TGCTGCGCTTGCTCACCGTGCGCCCGAAGATGTCGATaGGGTCGGGCGGGGACGAGGCGCGCTCCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: CCACSPCARRCR*GRAGTRRAPGP
Trigger: GGGACCGGGAGCGCGCCTCGTCCCCGCCCGACCGCATCGACATCTTCGGGCGCACGGTGAGCAAGCGCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp CGGGACCGCGACTCCCGCCGCCGGTTCCGTTTACTTTCCCGAGATTaGGAACGCTTCCGCACGCGCTCCTTGTCCCGGGATCGCGACCGG +
Preference number: 6 (lower is better)
Translates to: RDRDSRRRFRLLSRD*ERFRTRSLSRDRDR
Trigger: CCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAAACGGAACCGGCGGCGGGAGTCGCGGTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp CGGGACCGGCTGCGCTTCTTGTTGTGCTTGCTGCTCTTGGTGTGCTaGGAGCGGGACGAGCTCCGGCTCCGAGACCGGCCCATCCTTCCG +
Preference number: 6 (lower is better)
Translates to: RDRLRFLLCLLLLVC*ERDELRLRDRPILP
Trigger: CGGAAGGATGGGCCGGTCTCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp CGCTCCTTGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTaGTGCTTGCTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: RSLSRDRDRDRLRFL*CLLLLVCLERDELR
Trigger: CCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp CTTTCCCGAGATTTGGAACGCTTCCGCACGCGCTCCTaGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: LSRDLERFRTRS*SRDRDRDRLRF
Trigger: GAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp TTGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTGCTaGCTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTCCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LSRDRDRDRLRFLLC*LLLVCLERDELRLR
Trigger: TCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp CGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTaGTTGCTGCTCTTGGTGTGCTTGGAGCGGGACGAG +
Preference number: 6 (lower is better)
Translates to: RDRDRDRLRFLL*LLLLVCLERDE
Trigger: CTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp CGCGCTCCTTGTCCCGGGATCGCGACCGGGACCGGCTaGGCTTCTTGTTGTGCTTGCTGCTCTTGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: RAPCPGIATGTG*ASCCACCSWCA
Trigger: AGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGAGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp CCTCTCGCTTCTGCTTCTCGTCCAGGCTGCTGCGCTTaGTCACCGTGCGCCCGAAGATGTCGATGCGGTCGG +
Preference number: 6 (lower is better)
Translates to: PLASASRPGCCA*SPCARRCRCGR
Trigger: CCGACCGCATCGACATCTTCGGGCGCACGGTGAGCAAGCGCAGCAGCCTGGACGAGAAGCAGAAGCGAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 72 bp GGGACCGGCTGCGCTTCTTGTTGTGCTTGCTGCTCTTaGTGTGCTTGGAGCGGGACGAGCTCCGGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GTGCASCCACCS*CAWSGTSSGSE
Trigger: CTCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp CTGCGCTTCTTGTTGTGCTTGCTGCTCTTGGTGTGCTaGGAGCGGGACGAGCTCCGGCTCCGAGACCGGCCC +
Preference number: 6 (lower is better)
Translates to: LRFLLCLLLLVC*ERDELRLRDRP
Trigger: GGGCCGGTCTCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp CGGGACCGGCTGCGCTTCTTGTTGTGCTTGCTGCTCTaGGTGTGCTTGGAGCGGGACGAGCTCCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: RDRLRFLLCLLL*VCLERDELRLR
Trigger: TCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp TCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTaGTGCTTGCTGCTCTTGGTGTGCTTGGAGCGGGAC +
Preference number: 6 (lower is better)
Translates to: SRDRDRDRLRFL*CLLLLVCLERD
Trigger: GTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp ATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTGCTTaGTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTCC +
Preference number: 6 (lower is better)
Translates to: IATGTGCASCCA*CSWCAWSGTSS
Trigger: GGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp GATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTGCTaGCTGCTCTTGGTGTGCTTGGAGCGGGACGAGCTC +
Preference number: 6 (lower is better)
Translates to: DRDRDRLRFLLC*LLLVCLERDEL
Trigger: GAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp TCCTCTCGCTTCTGCTTCTCGTCCAGGCTGCTGCGCTaGCTCACCGTGCGCCCGAAGATGTCGATGCGGTCG +
Preference number: 6 (lower is better)
Translates to: SSRFCFSSRLLR*LTVRPKMSMRS
Trigger: CGACCGCATCGACATCTTCGGGCGCACGGTGAGCAAGCGCAGCAGCCTGGACGAGAAGCAGAAGCGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CCA 72 bp ACTCCCGCCGCCGGTTCCGTTTACTTTCCCGAGATTTaGAACGCTTCCGCACGCGCTCCTTGTCCCGGGATC +
Preference number: 6 (lower is better)
Translates to: TPAAGSVYFPEI*NASARAPCPGI
Trigger: GATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAAACGGAACCGGCGGCGGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp GACTCCCGCCGCCGGTTCCGTTTACTTTCCCGAGATTaGGAACGCTTCCGCACGCGCTCCTTGTCCCGGGAT +
Preference number: 6 (lower is better)
Translates to: DSRRRFRLLSRD*ERFRTRSLSRD
Trigger: ATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAAACGGAACCGGCGGCGGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp TTCCGTTTACTTTCCCGAGATTTGGAACGCTTCCGCACGCGCTCCTaGTCCCGGGATCGCGACCGGGACCGGCTGCGCTTCTTGTTGTGC +
Preference number: 6 (lower is better)
Translates to: FRLLSRDLERFRTRS*SRDRDRDRLRFLLC
Trigger: GCACAACAAGAAGCGCAGCCGGTCCCGGTCGCGATCCCGGGACAAGGAGCGCGTGCGGAAGCGTTCCAAATCTCGGGAAAGTAAACGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp CCAACGGACTTTATGCCTTTTCCCGGCGTCTACAGCTaGCACGAAGGCCGCCTCCAACGAGAAACCCGTAGC +
Preference number: 6 (lower is better)
Translates to: PTDFMPFPGVYS*HEGRLQRETRS
Trigger: GCTACGGGTTTCTCGTTGGAGGCGGCCTTCGTGGCAGCTGTAGACGCCGGGAAAAGGCATAAAGTCCGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp GCCGGAGGAAAGAAAGGTGTCGGCCAACGGACTTTATaGCTTTTCCCGGCGTCTACAGCTGCCACGAAGGCC +
Preference number: 6 (lower is better)
Translates to: AGGKKGVGQRTL*LFPASTAATKA
Trigger: GGCCTTCGTGGCAGCTGTAGACGCCGGGAAAAGGCATAAAGTCCGTTGGCCGACACCTTTCTTTCCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp GTCTTGTCCAGTGTCCTGCAGAGTGTGCTCCTCGGCTaGCATACGCGCCAGCTTCCTCTCTCTAGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: VLSSVLQSVLLG*HTRQLPLSSFL
Trigger: CAAAAAGCTAGAGAGAGGAAGCTGGCGCGTATGGCAGCCGAGGAGCACACTCTGCAGGACACTGGACAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360629.3
ENST00000375926.5
CDS GCA 72 bp TTCCAAACGACCGAGCGTTACCTCTCTAGCTTTTTGTaGGGCAAGCTCAGCTTGTCTCTGTCGCTCGAGTTC +
Preference number: 6 (lower is better)
Translates to: FQTTERYLSSFL*GKLSLSLSLEF
Trigger: GAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACGCTCGGTCGTTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS GCA 72 bp GAATATTTACTGTCTTGTCCAGTGTCCTGCAGAGTGTaGTCCTCGGCTGCCATACGCGCCAGCTTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: EYLLSCPVSCRV*SSAAIRASFLF
Trigger: AAAGAGGAAGCTGGCGCGTATGGCAGCCGAGGAGCACACTCTGCAGGACACTGGACAAGACAGTAAATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 72 bp ACTTTCCAAACGACCGAGCGTTACCTCTCTAGCTTTTaGTGCGGCAAGCTCAGCTTGTCTCTGTCGCTCGAG +
Preference number: 6 (lower is better)
Translates to: TFQTTERYLSSF*CGKLSLSLSLE
Trigger: CTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACGCTCGGTCGTTTGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp ACGCGCCAGCTTCCTCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATGAT +
Preference number: 6 (lower is better)
Translates to: TRQLPLSSFLCGKLS*SLSLEFFEQLLFHD
Trigger: ATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGAGGAAGCTGGCGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360629.3
ENST00000375926.5
CDS CAA 90 bp ACGACCGAGCGTTACCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATGAT +
Preference number: 6 (lower is better)
Translates to: TTERYLSSFLCGKLS*SLSLEFFEQLLFHD
Trigger: ATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACGCTCGGTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp ACTGTCTCTACTTTCCAAACGACCGAGCGTTACCTCTCTAGCTTTTaGTGCGGCAAGCTCAGCTTGTCTCTGTCGCTCGAGTTCTTCGAG +
Preference number: 6 (lower is better)
Translates to: TVSTFQTTERYLSSF*CGKLSLSLSLEFFE
Trigger: CTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACGCTCGGTCGTTTGGAAAGTAGAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS TCA 72 bp TCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATaGTGCGTTTGGCTTCCTCCACCCTTCGGAGAACTT +
Preference number: 6 (lower is better)
Translates to: SVARVLRATAFP*CVWLPPPFGEL
Trigger: AAGTTCTCCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp TCAGCTTGTCTCTGTCGCTCGAGTTCTTCGAGCAACTaGTTTTCCATGATGCGTTTGGCTTCCTCCACCCTT +
Preference number: 6 (lower is better)
Translates to: SACLCRSSSSSN*FSMMRLASSTL
Trigger: AAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS GCA 72 bp ACGTTTTGCACGTTCTTCCTCCTCTCTAGCTTTTTGTaGGGCAAGCTCAGCTTGTCTCTGTCGCTCGAGTTC +
Preference number: 6 (lower is better)
Translates to: TFCTFFLLSSFL*GKLSLSLSLEF
Trigger: GAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGAGGAAGAACGTGCAAAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS CAA 72 bp TTCCTCCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTT +
Preference number: 6 (lower is better)
Translates to: FLLSSFLCGKLS*SLSLEFFEQLL
Trigger: AAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS CAA 72 bp CGTTACCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTT +
Preference number: 6 (lower is better)
Translates to: RYLSSFLCGKLS*SLSLEFFEQLL
Trigger: AAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGTAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp CTCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATGATGCGTTaGGCTTCCTCCACCCTTCGGAGAACTTCTCGTTCAATTTCATCC +
Preference number: 6 (lower is better)
Translates to: LCRSSSSSNCFSMMR*ASSTLRRTSRSISS
Trigger: GGATGAAATTGAACGAGAAGTTCTCCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS CAA 90 bp TGCACGTTCTTCCTCCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTaGTCTCTGTCGCTCGAGTTCTTCGAGCAACTGCTTTTCCATGAT +
Preference number: 6 (lower is better)
Translates to: CTFFLLSSFLCGKLS*SLSLEFFEQLLFHD
Trigger: ATCATGGAAAAGCAGTTGCTCGAAGAACTCGAGCGACAGAGACAAGCTGAGCTTGCCGCACAAAAAGCTAGAGAGGAGGAAGAACGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400198.8
CDS GCA 72 bp TTAAAAGTTGAATATTTACTGTCTTGTCCAGTGTCCTaGAGAGTGTGCTCCTCGGCTGCCATACGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: LKVEYLLSCPVS*RVCSSAAIRAS
Trigger: GCTGGCGCGTATGGCAGCCGAGGAGCACACTCTGCAGGACACTGGACAAGACAGTAAATATTCAACTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CCA 72 bp AGCAGGAGGCAGAACCCAACACTGAAAGTTTTGCCATaGACTGTCTCTACTTTCCAAACGACCGAGCGTTAC +
Preference number: 6 (lower is better)
Translates to: SRRQNPTLKVLP*TVSTFQTTERY
Trigger: GTAACGCTCGGTCGTTTGGAAAGTAGAGACAGTCCATGGCAAAACTTTCAGTGTTGGGTTCTGCCTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 72 bp TCGAGTTCTTCGAGCAACTGCTTTTCCATGATGCGTTaGGCTTCCTCCACCCTTCGGAGAACTTCTCGTTCA +
Preference number: 6 (lower is better)
Translates to: SSSSSNCFSMMR*ASSTLRRTSRS
Trigger: TGAACGAGAAGTTCTCCGAAGGGTGGAGGAAGCCAAACGCATCATGGAAAAGCAGTTGCTCGAAGAACTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360629.3
ENST00000375926.5
ENST00000400198.8
ENST00000472226.2
CDS CAA 72 bp GAACTGAGCAGGAGGCAGAACCCAACACTGAAAGTTTaGCCATGGACTGTCTCTACTTTCCAAACGACCGAG +
Preference number: 6 (lower is better)
Translates to: ELSRRQNPTLKV*PWTVSTFQTTE
Trigger: CTCGGTCGTTTGGAAAGTAGAGACAGTCCATGGCAAAACTTTCAGTGTTGGGTTCTGCCTCCTGCTCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp TCTCTTTCTGAACTGAGCAGGAGGCAGAACCCAACACTGAAAGTTTaGCCATGGACTGTCTCTACTTTCCAAACGACCGAGCGTTACCTC +
Preference number: 6 (lower is better)
Translates to: SLSELSRRQNPTLKV*PWTVSTFQTTERYL
Trigger: GAGGTAACGCTCGGTCGTTTGGAAAGTAGAGACAGTCCATGGCAAAACTTTCAGTGTTGGGTTCTGCCTCCTGCTCAGTTCAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 72 bp TATTCTCTTCCAGTATTCGCTCTAGCTCCTCACGTTTaGCACGTTCTTCCTCCTAAAGGGGAGGATATGTTA +
Preference number: 6 (lower is better)
Translates to: YSLPVFALAPHV*HVLPPKGEDML
Trigger: TAACATATCCTCCCCTTTAGGAGGAAGAACGTGCAAAACGTGAGGAGCTAGAGCGAATACTGGAAGAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 72 bp GCTCCAGCTGCTGATAAAACAAATCATGTGTTTAGCTaGACTCCAGACAAGGACAACCTGTTCCTTCATAAC +
Preference number: 6 (lower is better)
Translates to: APAADKTNHVFS*TPDKDNLFLHN
Trigger: GTTATGAAGGAACAGGTTGTCCTTGTCTGGAGTCAAGCTAAACACATGATTTGTTTTATCAGCAGCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp TCAACTTCTGCTCCAGCTGCTGATAAAACAAATCATGTGTTTAGCTaGACTCCAGACAAGGACAACCTGTTCCTTCATAACTCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: STSAPAADKTNHVFS*TPDKDNLFLHNSLE
Trigger: CTCTAGAGAGTTATGAAGGAACAGGTTGTCCTTGTCTGGAGTCAAGCTAAACACATGATTTGTTTTATCAGCAGCTGGAGCAGAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS TCA 72 bp AGAAAGGAATTAGATAGTCTGTATTCCATCTCTTTCTaGACTGAGCAGGAGGCAGAACCCAACACTGAAAGT +
Preference number: 6 (lower is better)
Translates to: RKELDSLYSISF*TEQEAEPNTES
Trigger: ACTTTCAGTGTTGGGTTCTGCCTCCTGCTCAGTTCAGAAAGAGATGGAATACAGACTATCTAATTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CCA 72 bp GAGTGTTTCAGTGACTTTCACCAAGTTTTTGGATCCTaGAGTAATCAGTGCAAACAAGCCATAAAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: ECFSDFHQVFGS*SNQCKQAIKLQ
Trigger: CTGAAGCTTTATGGCTTGTTTGCACTGATTACTCCAGGATCCAAAAACTTGGTGAAAGTCACTGAAACACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 90 bp ACTACGGGCTTCTTCCATGGGGAAAATGGACTTAACATTCAGATGTaGACAATTTCGGAAGGCAGCTTATATTGTCATCTACAATCTGAA +
Preference number: 6 (lower is better)
Translates to: TTGFFHGENGLNIQM*TISEGSLYCHLQSE
Trigger: TTCAGATTGTAGATGACAATATAAGCTGCCTTCCGAAATTGTCAACATCTGAATGTTAAGTCCATTTTCCCCATGGAAGAAGCCCGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS GCA 72 bp ACTATGGTGACAGACACTCAGGGCTGTAAAGTAATTTaGCTTGAGTGTTTCAGTGACTTTCACCAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: TMVTDTQGCKVI*LECFSDFHQVF
Trigger: AAAAACTTGGTGAAAGTCACTGAAACACTCAAGGCAAATTACTTTACAGCCCTGAGTGTCTGTCACCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472226.2
CDS CAA 72 bp TTCTTCCATGGGGAAAATGGACTTAACATTCAGATGTaGACAATTTCGGAAGGCAGCTTATATTGTCATCTA +
Preference number: 6 (lower is better)
Translates to: FFHGENGLNIQM*TISEGSLYCHL
Trigger: TAGATGACAATATAAGCTGCCTTCCGAAATTGTCAACATCTGAATGTTAAGTCCATTTTCCCCATGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472226.2