RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARGFX (Homo sapiens)

Ensembl gene IDs: ENSG00000186103

Ensembl transcript IDs: ENST00000334384.5, ENST00000651603.1

Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAGGGGCCACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATaGCAGAAGGAAGGGAGAGGAGGAGGTAAGAGAGAGAGAGAAAGA +
Preference number: 1 (lower is better)
Translates to: WRGHTWPGPSCFILP*QKEGRGGGKRERER
Trigger: TCTTTCTCTCTCTCTCTTACCTCCTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGTGGCCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR CCA 90 bp AGGGTTTTGCCATGTTGCTCAGACTGTGATTACCTCTTTAACCACTaGTTATTTAGGAATGTGTTGTTTAATATCCACATATTTGTGAAT +
Preference number: 1 (lower is better)
Translates to: RVLPCCSDCDYLFNH*LFRNVLFNIHIFVN
Trigger: ATTCACAAATATGTGGATATTAAACAACACATTCCTAAATAACCAGTGGTTAAAGAGGTAATCACAGTCTGAGCAACATGGCAAAACCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAGGTGGAGGTTGCACTaGGCTGAGATCCCGCCACTG +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEERWRLH*AEIPPL
Trigger: CAGTGGCGGGATCTCAGCTCAGTGCAACCTCCACCT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAGGCAGAGGCTGCAGTaGGCCAAGATGGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEERQRLQ*AKMVPL
Trigger: CAGTGGCACCATCTTGGCTCACTGCAGCCTCTGCCT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGGTGGGAGGACTGTTTaGGCCCAGGAGGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHGGRTV*AQEAEA
Trigger: AGCCTCTGCCTCCTGGGCTCAAACAGTCCTCCCACC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGGATCTCTTGACCTCGTaGTCTGCCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEDLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCAGATCACGAGGTCAAGAGATC...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCTGAGATCCCGCCACTaGACTCCACCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEELRSRH*TPPWVT
Trigger: TGTCACCCAGGGTGGAGTGCAGTGGCGGGATCTCAG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCCAGGAGGTGGAGGTTaGACTGAGCTGAGATCCCGC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEPGGGG*TELRSR
Trigger: GCGGGATCTCAGCTCAGTGCAACCTCCACCTCCTGG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCTTGACCTCGTGATCTaGCCGCCTTGGCCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEELDLVI*PPWPPN
Trigger: GTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAAG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGCCTCTCGAGTAGCTaGGACCATGGGCTCTGGCCG +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHSLSSS*DHGLWP
Trigger: CGGCCAGAGCCCATGGTCCCAGCTACTCGAGAGGCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGCACTCCACCCTGGGTaGCAGTGCGAGACTCAGTCT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHALHPG*QCETQS
Trigger: AGACTGAGTCTCGCACTGTCACCCAGGGTGGAGTGC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGAGGTTGCACTGAGCTaGGATCCCGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHEVALS*DPATAL
Trigger: GAGTGCAGTGGCGGGATCTCAGCTCAGTGCAACCTC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGGTGGAGGTTGCACTaGGCTGAGATCCCGCCACTG +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHRWRLH*AEIPPL
Trigger: CAGTGGCGGGATCTCAGCTCAGTGCAACCTCCACCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCCAGGAGGTGGAGGTTaGACTGAGCTGAGATCCCGC +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEPGGGG*TELRSR
Trigger: GCGGGATCTCAGCTCAGTGCAACCTCCACCTCCTGG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTTGTCCAGGCTGGAGTaGAGTGGTGCGACCTCAGCT +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEELSRLE*SGATSA
Trigger: AGCTGAGGTCGCACCACTGCACTCCAGCCTGGACAA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCTTGACCTCGTGATCTaGCCGCCTTGGCCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLDLVI*PPWPPN
Trigger: GTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAAG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCGAGATTGCACGGCCTaGGTGACAGAGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEERDCTA*VTEQDS
Trigger: GGAGTCTTGCTCTGTCACCCAGGCCGTGCAATCTCG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCACAGGAGAATCACTTaGACCCCAGGAGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEHRRIT*TPGGGG
Trigger: ACCTCCACCTCCTGGGGTTCAAGTGATTCTCCTGTG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTTGTCCAGGCTGGAGTaGAGTGGTGCGACCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLSRLE*SGATSA
Trigger: AGCTGAGGTCGCACCACTGCACTCCAGCCTGGACAA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCTCAGAAGGCTGAGGTaGGAGGACTGTTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEELRRLR*EDCLSP
Trigger: TGGGCTCAAACAGTCCTCCCACCTCAGCCTTCTGAG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCACAGGAGAATCACTTaGACCCCAGGAGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHHRRIT*TPGGGG
Trigger: ACCTCCACCTCCTGGGGTTCAAGTGATTCTCCTGTG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGCCTGGGCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEAWATW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGCCCAGGC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGCCTGGGCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHAWATW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGCCCAGGC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGATGGTCTTGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEMVLIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCAAGACCAT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTGGCCAGGATGGTCTTaGTCTCTTGACCTCGTGATC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEWPGWS*SLDLVI
Trigger: GATCACGAGGTCAAGAGATCAAGACCATCCTGGCCA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGCAGGAGAATCATTTaGCCCAGGAGGCGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHSRRII*PRRRRL
Trigger: CAACCTCCGCCTCCTGGGTCAAATGATTCTCCTGCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTTGAGCTCAGGAGTTTaGGGCCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGELSSGV*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCTCAAACTCCTGAGCTCAA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTTGAGCTCAGGAGTTTaGGGCCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLSSGV*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCTCAAACTCCTGAGCTCAA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTTGCTCAAGCTGGAGTaGAGTGGCACAGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEELLKLE*SGTVTA
Trigger: AGCTGTGACTGTGCCACTGCACTCCAGCTTGAGCAA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGTAATCTCAGCCCTTTaGGAGGCTGAGACGGGAGGA +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHVISAL*EAETGG
Trigger: TCCTCCCGTCTCAGCCTCCCAAAGGGCTGAGATTAC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTGGCCAGGATGGTCTTaGTCTCTTGACCTCGTGATC +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEWPGWS*SLDLVI
Trigger: GATCACGAGGTCAAGAGATCAAGACCATCCTGGCCA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTTGCTCAAGCTGGAGTaGAGTGGCACAGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLLKLE*SGTVTA
Trigger: AGCTGTGACTGTGCCACTGCACTCCAGCTTGAGCAA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGGTAGTCCCAGCTACTTaGGAGGCTAAAGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEVVPAT*EAKAGE
Trigger: TTCTCCTGCTTTAGCCTCCCAAGTAGCTGGGACTAC...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGACAGTATCACTGTGTTaGTCAAGCTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEETVSLC*SSWSAV
Trigger: CACTGCACTCCAGCTTGAGCAACACAGTGATACTGT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGATTAGCCAGGTGTGGTaGCGAGCATCTGTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEISQVW*RASVVL
Trigger: TAGGACTACAGATGCTCGCCACCACACCTGGCTAAT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAAAATTAGCCAGGTGTaGTGGCGAGCATCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEKISQV*WRASVV
Trigger: GACTACAGATGCTCGCCACCACACCTGGCTAATTTT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGATTAGCCAGACATGGTaGCGCATGTCTGTAGTCTCA +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEISQTW*RMSVVS
Trigger: TGAGACTACAGACATGCGCCACCATGTCTGGCTAAT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCCAACGCATGAGCTGTaGGGGACACATTCATACCAT +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEPTHEL*GTHSYH
Trigger: ATGGTATGAATGTGTCCCCCACAGCTCATGCGTTGG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTGTTTCATCCTCCCATaGCAGAAGGAAGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHCFILP*QKEGRG
Trigger: TCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGGTGGGAGGACTGTTTaGGCCCAGGAGGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVGGRTV*AQEAEA
Trigger: AGCCTCTGCCTCCTGGGCTCAAACAGTCCTCCCACC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACACAGTATCACTGTGTTaGTCAAGCTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHTVSLC*SSWSAV
Trigger: CACTGCACTCCAGCTTGAGCAACACAGTGATACTGT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGATTAGCCAGACATGGTaGCGCATGTCTGTAGTCTCA +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEISQTW*RMSVVS
Trigger: TGAGACTACAGACATGCGCCACCATGTCTGGCTAAT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGAGGTTGCACTGAGCTaGGATCCCGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVEVALS*DPATAL
Trigger: GAGTGCAGTGGCGGGATCTCAGCTCAGTGCAACCTC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAAGGCAGAGGCTGCAGTaGGCCAAGATGGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVRQRLQ*AKMVPL
Trigger: CAGTGGCACCATCTTGGCTCACTGCAGCCTCTGCCT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTACTGAGATCCCGCCACTaGACTCCACCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVLRSRH*TPPWVT
Trigger: TGTCACCCAGGGTGGAGTGCAGTGGCGGGATCTCAG...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCGACCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVATSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGGTCGC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGAGGGTTTTGCCATGTTaGTCAGACTGTGATTACCTC +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGERVLPC*SDCDYL
Trigger: GAGGTAATCACAGTCTGAGCAACATGGCAAAACCCT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGGGTTTTGCCATGTTaGTCAGACTGTGATTACCTC +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHRVLPC*SDCDYL
Trigger: GAGGTAATCACAGTCTGAGCAACATGGCAAAACCCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTACACTGCACTCCACCCTaGGTGACAGTGCGAGACTCA +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVHCTPP*VTVRDS
Trigger: TGAGTCTCGCACTGTCACCCAGGGTGGAGTGCAGTG...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAATGGTCTTGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVMVLIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCAAGACCAT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTTTCCTTCTAAGCATTaGTTTAGCTTCATCCCATGT +
Preference number: 2 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEFPSKH*FSFIPC
Trigger: ACATGGGATGAAGCTAAATCAATGCTTAGAAGGAAA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGTTTGGAGAACACACTaGATAGTTTCAATCCTTGTG +
Preference number: 2 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHVWRTH*IVSILV
Trigger: CACAAGGATTGAAACTATGCAGTGTGTTCTCCAAAC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTTTCCTTCTAAGCATTaGTTTAGCTTCATCCCATGT +
Preference number: 2 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEFPSKH*FSFIPC
Trigger: ACATGGGATGAAGCTAAATCAATGCTTAGAAGGAAA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAATTAGCCAGGTGTGGTaGCGAGCATCTGTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVISQVW*RASVVL
Trigger: TAGGACTACAGATGCTCGCCACCACACCTGGCTAAT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAAAAATTAGCCAGGTGTaGTGGCGAGCATCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: NTLHSFNPCDSPASASQVKISQV*WRASVV
Trigger: GACTACAGATGCTCGCCACCACACCTGGCTAATTTT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR CAA 90 bp CATAGCAAGCTCTATTCACAACATCTATTTCTTGTGGAGTCAGATTaGGTATTCTGTGTCTTCCTAGGAATTTGTCCATTTCATTTATCT +
Preference number: 2 (lower is better)
Translates to: HSKLYSQHLFLVESD*VFCVFLGICPFHLS
Trigger: AGATAAATGAAATGGACAAATTCCTAGGAAGACACAGAATACCAAATCTGACTCCACAAGAAATAGATGTTGTGAATAGAGCTTGCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCGTGATCTGCCCGCCTaGGCCTCCCAACGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGERDLPA*ASQRAG
Trigger: CCCAGCACGTTGGGAGGCCAAGGCGGGCAGATCACG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR CCA 72 bp CTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCTaGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAG +
Preference number: 3 (lower is better)
Translates to: LPVSDGRWRGHT*PGPSCFILPWQ
Trigger: CTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTGTATTCCTAGCACTTaGGGAGGCTGTGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEECIPST*GGCGRW
Trigger: CCACCTGCCACAGCCTCCCAAAGTGCTAGGAATACA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGACAGTATCACTGTGTaGCTCAAGCTGGAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEDSITV*LKLECS
Trigger: ACTGCACTCCAGCTTGAGCAACACAGTGATACTGTC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGGTGGGGATAAAGATTTaGGGGAAGAAGAAGGCCGAA +
Preference number: 3 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEVGIKI*GKKKAE
Trigger: TTCGGCCTTCTTCTTCCCCAAAATCTTTATCCCCAC...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGTGGGGATAAAGATTTaGGGGAAGAAGAAGGCCGAA +
Preference number: 3 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEVGIKI*GKKKAE
Trigger: TTCGGCCTTCTTCTTCCCCAAAATCTTTATCCCCAC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCACCTCTCAAAGCTGTaGCTTTGGGGATTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHHLSKL*LWGLSF
Trigger: GAAACTTAATCCCCAAAGCAACAGCTTTGAGAGGTG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGCTTCATCCCATGTTTaGGTTTGTTGTGCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHASSHV*VCCAFV
Trigger: AACAAAAGCACAACAAACCAAAACATGGGATGAAGC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR-3UTR CAA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGCTTCATCCCATGTTTaGGTTTGTTGTGCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEASSHV*VCCAFV
Trigger: AACAAAAGCACAACAAACCAAAACATGGGATGAAGC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR GCA 72 bp CCCACAATAATGGCATTAATCCATTCATGGGGGCTCTaGCTAGTAACCCTTAAAGGTCTCACCTCTCAAAGC +
Preference number: 3 (lower is better)
Translates to: PTIMALIHSWGL*LVTLKGLTSQS
Trigger: GCTTTGAGAGGTGAGACCTTTAAGGGTTACTAGGCAGAGCCCCCATGAATGGATTAATGCCATTATTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR CCA 72 bp CCATGTTGCTCAGACTGTGATTACCTCTTTAACCACTaGTTATTTAGGAATGTGTTGTTTAATATCCACATA +
Preference number: 3 (lower is better)
Translates to: PCCSDCDYLFNH*LFRNVLFNIHI
Trigger: TATGTGGATATTAAACAACACATTCCTAAATAACCAGTGGTTAAAGAGGTAATCACAGTCTGAGCAACATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAGCCTCTCGAGTAGCTaGGACCATGGGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEESLSSS*DHGLWP
Trigger: CGGCCAGAGCCCATGGTCCCAGCTACTCGAGAGGCT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGGTGGGAGGACTGTTTaGGCCCAGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEGGRTV*AQEAEA
Trigger: AGCCTCTGCCTCCTGGGCTCAAACAGTCCTCCCACC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGCACTCCACCCTGGGTaGCAGTGCGAGACTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEALHPG*QCETQS
Trigger: AGACTGAGTCTCGCACTGTCACCCAGGGTGGAGTGC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGAGGTGGAGGTTGCACTaGGCTGAGATCCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGERWRLH*AEIPPL
Trigger: CAGTGGCGGGATCTCAGCTCAGTGCAACCTCCACCT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGGCAGAGGCTGCAGTaGGCCAAGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHRQRLQ*AKMVPL
Trigger: CAGTGGCACCATCTTGGCTCACTGCAGCCTCTGCCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGATCTCTTGACCTCGTaGTCTGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHDLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCAGATCACGAGGTCAAGAGATC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCTGAGATCCCGCCACTaGACTCCACCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLRSRH*TPPWVT
Trigger: TGTCACCCAGGGTGGAGTGCAGTGGCGGGATCTCAG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCTGAGATCCCGCCACTaGACTCCACCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGELRSRH*TPPWVT
Trigger: TGTCACCCAGGGTGGAGTGCAGTGGCGGGATCTCAG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCCAGGAGGTGGAGGTTaGACTGAGCTGAGATCCCGC +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHPGGGG*TELRSR
Trigger: GCGGGATCTCAGCTCAGTGCAACCTCCACCTCCTGG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGCGACCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHATSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGGTCGC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGCGACCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEATSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGGTCGC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCTTGACCTCGTGATCTaGCCGCCTTGGCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGELDLVI*PPWPPN
Trigger: GTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAAG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAGCAGGAGAATCATTTaGCCCAGGAGGCGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEESRRII*PRRRRL
Trigger: CAACCTCCGCCTCCTGGGTCAAATGATTCTCCTGCT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCACTGCACTCCACCCTaGGTGACAGTGCGAGACTCA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHHCTPP*VTVRDS
Trigger: TGAGTCTCGCACTGTCACCCAGGGTGGAGTGCAGTG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCGAGATTGCACGGCCTaGGTGACAGAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGERDCTA*VTEQDS
Trigger: GGAGTCTTGCTCTGTCACCCAGGCCGTGCAATCTCG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTTGAACCTGGGAGGTTaGGGCTGCAGTAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGELNLGG*GCSKPR
Trigger: TCTCGGCTTACTGCAGCCTCAACCTCCCAGGTTCAA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTTGAACCTGGGAGGTTaGGGCTGCAGTAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLNLGG*GCSKPR
Trigger: TCTCGGCTTACTGCAGCCTCAACCTCCCAGGTTCAA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCACAGGAGAATCACTTaGACCCCAGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEHRRIT*TPGGGG
Trigger: ACCTCCACCTCCTGGGGTTCAAGTGATTCTCCTGTG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACATGGTCTTGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHMVLIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCAAGACCAT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGCCGAGACCGTGCCACTaGACTCCAGCTTGGATAACA +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEPRPCH*TPAWIT
Trigger: TGTTATCCAAGCTGGAGTGCAGTGGCACGGTCTCGG...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCCGAGACCGTGCCACTaGACTCCAGCTTGGATAACA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHPRPCH*TPAWIT
Trigger: TGTTATCCAAGCTGGAGTGCAGTGGCACGGTCTCGG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCTCAGAAGGCTGAGGTaGGAGGACTGTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHLRRLR*EDCLSP
Trigger: TGGGCTCAAACAGTCCTCCCACCTCAGCCTTCTGAG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCCAACGCATGAGCTGTaGGGGACACATTCATACCAT +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEPTHEL*GTHSYH
Trigger: ATGGTATGAATGTGTCCCCCACAGCTCATGCGTTGG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTGTTTCATCCTCCCATaGCAGAAGGAAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEECFILP*QKEGRG
Trigger: TCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACATTAGCCAGGTGTGGTaGCGAGCATCTGTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHISQVW*RASVVL
Trigger: TAGGACTACAGATGCTCGCCACCACACCTGGCTAAT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGAGGGTTTTGCCATGTTaGTCAGACTGTGATTACCTC +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEERVLPC*SDCDYL
Trigger: GAGGTAATCACAGTCTGAGCAACATGGCAAAACCCT...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGACAGTATCACTGTGTTaGTCAAGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGETVSLC*SSWSAV
Trigger: CACTGCACTCCAGCTTGAGCAACACAGTGATACTGT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAAGCCTCTCGAGTAGCTaGGACCATGGGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVSLSSS*DHGLWP
Trigger: CGGCCAGAGCCCATGGTCCCAGCTACTCGAGAGGCT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTACAGTTCTGAAGGCTaGGAAGTCTTCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHYSSEG*EVFQSQ
Trigger: CTGAGACTGGAAGACTTCCCAGCCTTCAGAACTGTA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTACAGTTCTGAAGGCTaGGAAGTCTTCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEYSSEG*EVFQSQ
Trigger: CTGAGACTGGAAGACTTCCCAGCCTTCAGAACTGTA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGATTGCTGCTGCTGCTaGTTCTTCAATTTGAATCGC +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEDCCCC*FFNLNR
Trigger: GCGATTCAAATTGAAGAAGCAGCAGCAGCAGCAATC...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTGCTTTGCTGATTGCTaGTGCTGCTGCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHCFADC*CCCFFN
Trigger: ATTGAAGAAGCAGCAGCAGCAGCAATCAGCAAAGCA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACAGCTCCTCATACTGTTaGTGGGTGAAAGAAGTACGT +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHSSSYC*WVKEVR
Trigger: ACGTACTTCTTTCACCCACCAACAGTATGAGGAGCT...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGTATTTCTTACAGTTCTaGAGGCTGGGAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGEYFLQF*RLGSLP
Trigger: TGGAAGACTTCCCAGCCTTCAGAACTGTAAGAAATA...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTTTGCTGATTGCTGCTaGTGCTGCTTCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHFADCC*CCFFNL
Trigger: CAAATTGAAGAAGCAGCAGCAGCAGCAATCAGCAAA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATTGTCCAGGCTGGAGTaGAGTGGTGCGACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVLSRLE*SGATSA
Trigger: AGCTGAGGTCGCACCACTGCACTCCAGCCTGGACAA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGGTTTGGAGAACACACTaGATAGTTTCAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEVWRTH*IVSILV
Trigger: CACAAGGATTGAAACTATGCAGTGTGTTCTCCAAAC...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTACGAGATTGCACGGCCTaGGTGACAGAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVRDCTA*VTEQDS
Trigger: GGAGTCTTGCTCTGTCACCCAGGCCGTGCAATCTCG...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCCTGGGCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVAWATW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGCCCAGGC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGTAATCTCAGCCCTTTaGGAGGCTGAGACGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVVISAL*EAETGG
Trigger: TCCTCCCGTCTCAGCCTCCCAAAGGGCTGAGATTAC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATTGCTCAAGCTGGAGTaGAGTGGCACAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVLLKLE*SGTVTA
Trigger: AGCTGTGACTGTGCCACTGCACTCCAGCTTGAGCAA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTACCAACGCATGAGCTGTaGGGGACACATTCATACCAT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVPTHEL*GTHSYH
Trigger: ATGGTATGAATGTGTCCCCCACAGCTCATGCGTTGG...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATGTTTCATCCTCCCATaGCAGAAGGAAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVCFILP*QKEGRG
Trigger: TCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR TCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGTTCCTCATGGTTTCTaGAATCTGTCACGAATCCCC +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVVPHGF*NLSRIP
Trigger: GGGGATTCGTGACAGATTTCAGAAACCATGAGGAAC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334384.5
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAACAGTATCACTGTGTTaGTCAAGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVTVSLC*SSWSAV
Trigger: CACTGCACTCCAGCTTGAGCAACACAGTGATACTGT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGATTGCTGCTGCTGCTaGTTCTTCAATTTGAATCGC +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVDCCCC*FFNLNR
Trigger: GCGATTCAAATTGAAGAAGCAGCAGCAGCAGCAATC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATGCTTTGCTGATTGCTaGTGCTGCTGCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVCFADC*CCCFFN
Trigger: ATTGAAGAAGCAGCAGCAGCAGCAATCAGCAAAGCA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAAGCTCCTCATACTGTTaGTGGGTGAAAGAAGTACGT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVSSSYC*WVKEVR
Trigger: ACGTACTTCTTTCACCCACCAACAGTATGAGGAGCT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGATTGCTGCTGCTaGTGCTTCTTCAATTTGAAT +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVADCCC*CFFNLN
Trigger: ATTCAAATTGAAGAAGCAGCAGCAGCAGCAATCAGC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR GCA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATTTGCTGATTGCTGCTaGTGCTGCTTCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: NTLHSFNPCDSPASASQVFADCC*CCFFNL
Trigger: CAAATTGAAGAAGCAGCAGCAGCAGCAATCAGCAAA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
3UTR CAA 72 bp CTCTATTCACAACATCTATTTCTTGTGGAGTCAGATTaGGTATTCTGTGTCTTCCTAGGAATTTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LYSQHLFLVESD*VFCVFLGICPF
Trigger: AAATGGACAAATTCCTAGGAAGACACAGAATACCAAATCTGACTCCACAAGAAATAGATGTTGTGAATAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACCGTGATCTGCCCGCCTaGGCCTCCCAACGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHRDLPA*ASQRAG
Trigger: CCCAGCACGTTGGGAGGCCAAGGCGGGCAGATCACG...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTGTATTCCTAGCACTTaGGGAGGCTGTGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHCIPST*GGCGRW
Trigger: CCACCTGCCACAGCCTCCCAAAGTGCTAGGAATACA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp ACACCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGACCAAACCTTTACTGTaGACTCCGGTAGGTCGAGTC +
Preference number: 5 (lower is better)
Translates to: TPGQGLHVSSSHGRRKGETKPLL*TPVGRV
Trigger: GACTCGACCTACCGGAGTCAACAGTAAAGGTTTGGT...CTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGTGCTGCTTCTTCAATTaGAATCGCCGGTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEECCFFN*NRRFLN
Trigger: GTTCAGGAACCGGCGATTCAAATTGAAGAAGCAGCA...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACTCTGGTTTCGTTGCTTaGCTGATTGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHSGFVA*LIAAAA
Trigger: AGCAGCAGCAGCAATCAGCAAAGCAACGAAACCAGA...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp GTTCTGAAGGCTGGGAAGTCTTCCAGTCTCAGACGGAAGATGGAGGGGCCACACGACAGTATCACTGTGTaGCTCAAGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VLKAGKSSSLRRKMEGPHDSITV*LKLECS
Trigger: ACTGCACTCCAGCTTGAGCAACACAGTGATACTGTC...GTGTGGCCCCTCCATCTTCCGTCTGAGACTGGAAGACTTCCCAGCCTTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGCACCTCTCAAAGCTGTaGCTTTGGGGATTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEHLSKL*LWGLSF
Trigger: GAAACTTAATCCCCAAAGCAACAGCTTTGAGAGGTG...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp CCTGGCCAGGGCCTTCATGTTTCATCCTCCCATGGCAGAAGGAAGGGAGAGGAGGCTTCATCCCATGTTTaGGTTTGTTGTGCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PGQGLHVSSSHGRRKGEEASSHV*VCCAFV
Trigger: AACAAAAGCACAACAAACCAAAACATGGGATGAAGC...CTCCTCTCCCTTCCTTCTGCCATGGGAGGATGAAACATGAAGGCCCTGGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAACCAAACCTTTACTGTaGACTCCGGTAGGTCGAGTC +
Preference number: 5 (lower is better)
Translates to: NTLHSFNPCDSPASASQVTKPLL*TPVGRV
Trigger: GACTCGACCTACCGGAGTCAACAGTAAAGGTTTGGT...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTATCTGGTTTCGTTGCTTaGCTGATTGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NTLHSFNPCDSPASASQVSGFVA*LIAAAA
Trigger: AGCAGCAGCAGCAATCAGCAAAGCAACGAAACCAGA...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1
CDS-3UTR CAA 90 bp AACACACTGCATAGTTTCAATCCTTGTGATTCTCCTGCCTCAGCCTCCCAAGTAGTGGGGATAAAGATTTaGGGGAAGAAGAAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: NTLHSFNPCDSPASASQVVGIKI*GKKKAE
Trigger: TTCGGCCTTCTTCTTCCCCAAAATCTTTATCCCCAC...TACTTGGGAGGCTGAGGCAGGAGAATCACAAGGATTGAAACTATGCAGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334384.5
ENST00000651603.1