RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFRP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101246

Ensembl transcript IDs: ENST00000424545.2, ENST00000607873.1, ENST00000609188.1, ENST00000609537.5, ENST00000610414.4, ENST00000610774.1, ENST00000612157.4, ENST00000612256.4, ENST00000612772.1, ENST00000614942.4, ENST00000618568.4, ENST00000618838.4, ENST00000619493.4, ENST00000622789.5

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGGGCTGCCAGACTCCCCTCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: RASKGRRCALWKGCR*RAWASRAARLPSKA
Trigger: GGCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR CCA 90 bp AAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTaGGCCAGCCGGGCTGCCAGACTCCCCTCCAAAGCCTCCGGATGC +
Preference number: 1 (lower is better)
Translates to: KGRRCALWKGCRCRA*ASRAARLPSKASGC
Trigger: GCATCCGGAGGCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 90 bp CAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATC +
Preference number: 1 (lower is better)
Translates to: QPSRRQRGCAYVMSL*RGGRCTFRTTHFTI
Trigger: GATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR CCA 90 bp CCCGCAGGTGCAGCCCCCACTCACCCTGTGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTGCCGATCTTGCTGGTGCAGTCGCTG +
Preference number: 1 (lower is better)
Translates to: PAGAAPTHPVRAEQA*VRQSRLPILLVQSL
Trigger: CAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCTCACAGGGTGAGTGGGGGCTGCACCTGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614942.4
3UTR GCA 90 bp CAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCG +
Preference number: 1 (lower is better)
Translates to: QRGCAYVMSLCRGGR*TFRTTHFTIHSMPS
Trigger: CGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR GCA 90 bp GAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCA +
Preference number: 1 (lower is better)
Translates to: ETATGSPEGPTGLSS*SPSQPEHWSPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 90 bp GCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGGTGTGAGGCG +
Preference number: 1 (lower is better)
Translates to: AAGAHSARHTSPSTR*PRAPLCCEDSGCEA
Trigger: CGCCTCACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
3UTR TCA 90 bp GACCTGCCAAAGACCTCCTCCAGGCCTCCCATGCTTTCCGGGAAGTaGAGCTTCTCCCTCTCTGGGGCAGGCTCTGAAGCCTCCCGATGC +
Preference number: 1 (lower is better)
Translates to: DLPKTSSRPPMLSGK*SFSLSGAGSEASRC
Trigger: GCATCGGGAGGCTTCAGAGCCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGGAGGTCTTTGGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 90 bp ATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCCTCCCATaGTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: ISREGTCQRPPPGLP*FPGSEASPSLGQAL
Trigger: CAGAGCCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 90 bp ATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAA +
Preference number: 1 (lower is better)
Translates to: IPPTPNSQGISREGT*QRPPPGLPCFPGSE
Trigger: TTCACTTCCCGGAAAGCATGGGAGGCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 90 bp GCCTGGGCCAGCCGGGCTGCCAGACTCCCCTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAA +
Preference number: 1 (lower is better)
Translates to: AWASRAARLPSKASG*LRFSRHRGKFVFEK
Trigger: TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 2 (lower is better)
Translates to: GLLLDGAETATGSPEGPTAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR GCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PRKAAAAPCGKAAAAGPGRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GLLLDGAETATGSPEGPTALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LTGLLLDGAETATGSPEGRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: PPERASKGRRCALWKGCRLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PERASKGRRCALWKGCRCALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 2 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACGCAGCCGGGGACACCTaGGCCGCCCGCTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GFPYLRQTLPGRISGECHAAGDT*AARCAQ
Trigger: CTGGGCACAGCGGGCGGCTCAGGTGTCCCCGGCTGC...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGAGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 2 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR GCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: ERASKGRRCALWKGCRCRLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: LLDGAETATGSPEGPTGLSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCAAAGCCCCCGCAGGTaGAGCCCCCACTCACCCTGT +
Preference number: 2 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVQSPRR*SPHSPC
Trigger: ACAGGGTGAGTGGGGGCTGCACCTGCGGGGGCTTTG...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000614942.4
3UTR-3UTR TCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PRKAAAAPCGKAAAAGPGTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: PRKAAAAPCGKAAAAGPGSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...CCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR GCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 2 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 2 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 2 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 2 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: LLPTARLRKNTALGRPSGWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GFPYLRQTLPGRISGECHALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GLLLDGAETATGSPEGPTTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: LLPTARLRKNTALGRPSGAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACCTCGCGCACCCCTTTaGTGTGAAGACAGCGGGTGT +
Preference number: 2 (lower is better)
Translates to: GLLLDGAETATGSPEGPTPRAPL*CEDSGC
Trigger: ACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
3UTR-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACATCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: GLLLDGAETATGSPEGPTSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 2 (lower is better)
Translates to: VSNSQEPPPSRREGMDRAGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 2 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGAACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 2 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: TATPSRPPQLFASVSSLPWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PNSQGISREGTCQRPPPGALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: PNSQGISREGTCQRPPPGAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 2 (lower is better)
Translates to: LLPTARLRKNTALGRPSGRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: PPERASKGRRCALWKGCRSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 2 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR TCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 2 (lower is better)
Translates to: LLPTARLRKNTALGRPSGDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: LLPTARLRKNTALGRPSGGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: PNSQGISREGTCQRPPPGCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PTARLRKNTALGRPSGVRSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: PPERASKGRRCALWKGCRSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: RKGLERPPLRPVERLPLQPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCAGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 2 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 2 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: WQPWLTGLLLDGAETATGWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 2 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: PTARLRKNTALGRPSGVRSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 2 (lower is better)
Translates to: AAAGAHSARHTSPSTRCPRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...AGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR TCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 2 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 2 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 2 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: TATPSRPPQLFASVSSLPALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCGGGGAGTGCCACCTCTaGCCCCAGTGGCTGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLGECHL*PQWLWH
Trigger: GTGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCC...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACAGGATCAGTGGGGAGTaGCACCTCTGCCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GFPYLRQTLPGRISGECHRISGE*HLCPQW
Trigger: CCACTGGGGGCAGAGGTGGCACTCCCCACTGATCCT...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 2 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614942.4
3UTR-3UTR CCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAASQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 2 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 2 (lower is better)
Translates to: LQASHAFREVKLLPLWGRSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...CCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 2 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 2 (lower is better)
Translates to: LLDGAETATGSPEGPTGLSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCTCCGCAGGAAGGGAGTaGCTGGACTCTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PNSQGISREGTCQRPPPGSAGRE*LDSPGP
Trigger: TGGGCCTGGAGAGTCCAGGCACTCCCTTCCTGCGGA...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCCTCGCGCACCCCTTTaGTGTGAAGACAGCGGGTGT +
Preference number: 2 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRPRAPL*CEDSGC
Trigger: ACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGG...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
3UTR-3UTR GCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: PTARLRKNTALGRPSGVRSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 2 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCACACACAGGGTCCCCTaGAGAGGACGCGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: YHCWKNRMGLRPALVAGATHRVP*RGRGDF
Trigger: GAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGT...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCAGTGGCTGTGGCACGTaGCAGGGGCCCCTGAAGCTC +
Preference number: 2 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLSGCGT*QGPLKL
Trigger: GAGCTTCAGGGGCCCCTGCCACGTGCCACAGCCACT...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GIGLPPQASALSRGCITITGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: VSNSQEPPPSRREGMDRAAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGTCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQSREGT*QRPPPG
Trigger: GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGA...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: PQISSMGANRRPLLQHQGSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: TATPSRPPQLFASVSSLPPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 2 (lower is better)
Translates to: PTPNSQGISREGTCQRPPRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...AGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 2 (lower is better)
Translates to: RVSLLEEQDGAQASPSRRIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...CCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 2 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 2 (lower is better)
Translates to: RKGLERPPLRPVERLPLQSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp CGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACATCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 2 (lower is better)
Translates to: RLRDVPLPRRPVHIPHDTSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...TGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR GCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 2 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614942.4
3UTR-3UTR CCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: YHCWKNRMGLRPALVAGASQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR TCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACTCTGGGGCAGGCTCTaGAGCCTCCCGATGCACCCA +
Preference number: 2 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGLWGRL*SLPMHP
Trigger: TGGGTGCATCGGGAGGCTTCAGAGCCTGCCCCAGAG...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 2 (lower is better)
Translates to: LQASHAFREVKLLPLWGRPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...CCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 2 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACGGAGGGTATCATTGCTaGAAGAACAGGATGGGGCTC +
Preference number: 2 (lower is better)
Translates to: GFPYLRQTLPGRISGECHGGYHC*KNRMGL
Trigger: GAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCC...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: VSNSQEPPPSRREGMDRAFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 2 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 25 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: PNSQGISREGTCQRPPPGFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 2 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGAAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR GCA 90 bp TTTATAAAGCTTTTTCATAAAACTGGTTGTAGTTGCACAGCTACTGGGAGGGCAGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: FIKLFHKTGCSCTATGRAALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTTATGAAAAAGCTTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CCA 90 bp TTTATAAAGCTTTTTCATAAAACTGGTTGTAGTTGCACAGCTACTGGGAGGGCACCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: FIKLFHKTGCSCTATGRAPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTTATGAAAAAGCTTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 72 bp AAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGGGCTGCCAGACTCCCC +
Preference number: 3 (lower is better)
Translates to: KGRRCALWKGCR*RAWASRAARLP
Trigger: GGGGAGTCTGGCAGCCCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR TCA 72 bp ACCAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCGGCCGGTGCACATTCC +
Preference number: 3 (lower is better)
Translates to: TSRPDGSAAAPT*CPSAAAAGAHS
Trigger: GGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CAA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 3 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618568.4
3UTR GCA 72 bp CGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACATTCCGCACGACACAC +
Preference number: 3 (lower is better)
Translates to: RRQRGCAYVMSL*RGGRCTFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CAA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 3 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
3UTR GCA 72 bp GGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCCCGCTGGCCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: GLPPQASALSRG*ITIQGPRWPLG
Trigger: TCCCAAAGGCCAGCGGGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR CCA 72 bp GCAGCCCCCACTCACCCTGTGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTGCCGATCTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: AAPTHPVRAEQA*VRQSRLPILLV
Trigger: CACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCTCACAGGGTGAGTGGGGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614942.4
3UTR-3UTR CAA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 72 bp GCCCAGATCCCTCAGGCTGCCTGCCATCAGAACTGCTaGCCGGGGCTTCCCCTACCTCAGACAGACCCTCCC +
Preference number: 3 (lower is better)
Translates to: AQIPQAACHQNC*PGLPLPQTDPP
Trigger: GGGAGGGTCTGTCTGAGGTAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCAGGCAGCCTGAGGGATCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR CCA 72 bp CCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTaGGGAGTGCCACCTCTGCCCCCAGTGGCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: PLPQTDPPWEDQ*GVPPLPPVAVA
Trigger: TGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR CCA 72 bp TCGCGCACCCCTTTGCCTGTGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTGCCGATCTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: SRTPLPVRAEQA*VRQSRLPILLV
Trigger: CACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618568.4
3UTR GCA 72 bp TGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACACTTCACCATCCACTCG +
Preference number: 3 (lower is better)
Translates to: CAYVMSLCRGGR*TFRTTHFTIHS
Trigger: CGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CAA 90 bp AGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: RVSLLEEQDGAQASPSRRGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGAGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: GFPYLRQTLPGRISGECHGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR CCA 72 bp AATCCAGGGCCCCCGCTGGCCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGATCAGCCCCAGACCAC +
Preference number: 3 (lower is better)
Translates to: NPGPPLAFGNMA*VFLKARSAPDH
Trigger: GTGGTCTGGGGCTGATCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 72 bp GCACATTCCGCACGACACACTTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGG +
Preference number: 3 (lower is better)
Translates to: AHSARHTSPSTR*PRAPLCCEDSG
Trigger: CCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
3UTR-3UTR CAA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 3 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSLAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
3UTR GCA 72 bp AGCCGGGCTGCCAGACTCCCCTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACATAGAGGAAAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: SRAARLPSKASG*LRFSRHRGKFV
Trigger: GACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGGGGAGTCTGGCAGCCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp GCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: AAAGAHSARHTSPSTRCPDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...AGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
3UTR-3UTR CAA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCAGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
3UTR-3UTR CAA 90 bp TTTATAAAGCTTTTTCATAAAACTGGTTGTAGTTGCACAGCTACTGGGAGGGCATCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 3 (lower is better)
Translates to: FIKLFHKTGCSCTATGRASRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTTATGAAAAAGCTTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614942.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCGCAGCCGGGGACACCTaGGCCGCCCGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRAAGDT*AARCAQ
Trigger: CTGGGCACAGCGGGCGGCTCAGGTGTCCCCGGCTGC...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPSRRQRGCAYVMSLCRGPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...GCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWAWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: RRQRGCAYVMSLCRGGRCAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...GCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR TCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWACTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCGCCGGGTGTTCACAGTaGGCTCAGCCGCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRAGCSQ*AQPRSR
Trigger: GCGGGAGCGCGGCTGAGCTCACTGTGAACACCCGGC...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCAGCCCCGCAGCTGCTaGGCCACCCCCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVQPRSC*ATPTLT
Trigger: AGTCAGGGTGGGGGTGGCGCAGCAGCTGCGGGGCTG...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QPSRRQRGCAYVMSLCRGARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...GCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp CGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: RRQRGCAYVMSLCRGGRCRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...GCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR TCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RKGLERPPLRPVERLPLQAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCGCAGCCGGGGACACCTaGGCCGCCCGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAAAGAHSARHTSPSTRCAAGDT*AARCAQ
Trigger: CTGGGCACAGCGGGCGGCTCAGGTGTCCCCGGCTGC...GCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614942.4
CDS-3UTR GCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LRLRDVPLPRRPVHIPHDWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCGGGGAGTGCCACCTCTaGCCCCAGTGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSSMGRRQPRGLPRVPQGGECHL*PQWLWH
Trigger: GTGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCC...GCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCTGAGCCGCCCGCTGTaGCCAGATCCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGLSRPL*PDPSGC
Trigger: GCAGCCTGAGGGATCTGGGCACAGCGGGCGGCTCAG...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWARAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCCTCAGGGAATGAGCTaGACCGCGTCCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGPQGMS*TASQRP
Trigger: AGGCCGCTGGGACGCGGTTCAGCTCATTCCCTGAGG...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607873.1
ENST00000614942.4
CDS-3UTR TCA 90 bp CGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RDVPLPRRPVHIPHDTLHAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...GTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR TCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGCTCTGGGGCAGGCTCTaGAGCCTCCCGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLLWGRL*SLPMHP
Trigger: TGGGTGCATCGGGAGGCTTCAGAGCCTGCCCCAGAG...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAAALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGCTCCCCAGGAGCCCCTaGAGGCGCCGGGTAGGGACG +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGLPRSP*RRRVGT
Trigger: CGTCCCTACCCGGCGCCTGCAGGGGCTCCTGGGGAG...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCTCCGCAGGAAGGGAGTaGCTGGACTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSSAGRE*LDSPGP
Trigger: TGGGCCTGGAGAGTCCAGGCACTCCCTTCCTGCGGA...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGCCCCACCCTGACTCATaGCCCTTCCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWPHPDS*PFPAAP
Trigger: AGGAGCTGCTGGGAAGGGGCATGAGTCAGGGTGGGG...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCACAGCCCCGCAGCTGCTaGGCCACCCCCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAAQPRSC*ATPTLT
Trigger: AGTCAGGGTGGGGGTGGCGCAGCAGCTGCGGGGCTG...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGCAGCCCCGCAGCTGCTaGGCCACCCCCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: RKGLERPPLRPVERLPLQQPRSC*ATPTLT
Trigger: AGTCAGGGTGGGGGTGGCGCAGCAGCTGCGGGGCTG...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCAGGATCAGTGGGGAGTaGCACCTCTGCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSRISGE*HLCPQW
Trigger: CCACTGGGGGCAGAGGTGGCACTCCCCACTGATCCT...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCTGCCATCAGAACTaGTGCCCGGGGCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWACHQN*CPGLPL
Trigger: TAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCAGGC...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCCTGAGCCGCCCGCTGTaGCCAGATCCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTLSRPL*PDPSGC
Trigger: GCAGCCTGAGGGATCTGGGCACAGCGGGCGGCTCAG...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: SSSMGRRQPRGLPRVPQGRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...GCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKGLERPPLRPVERLPLQRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWAIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPERASKGRRCALWKGCRREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGAGTGGCTGTGGCACGTaGCAGGGGCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRSGCGT*QGPLKL
Trigger: GAGCTTCAGGGGCCCCTGCCACGTGCCACAGCCACT...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: ERASKGRRCALWKGCRCRDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWASPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGATGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SLCRGGRCTFRTTHFTIHAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...GTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGTCCGCAGGAAGGGAGTaGCTGGACTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRSAGRE*LDSPGP
Trigger: TGGGCCTGGAGAGTCCAGGCACTCCCTTCCTGCGGA...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTTCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGSREGT*QRPPPG
Trigger: GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGA...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCCTGCCATCAGAACTaGTGCCCGGGGCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRACHQN*CPGLPL
Trigger: TAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCAGGC...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGCGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQRTAPR*SPPSQT
Trigger: CGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCG...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: ERASKGRRCALWKGCRCRRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWAPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGACACACAGGGTCCCCTaGAGAGGACGCGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLTHRVP*RGRGDF
Trigger: GAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGT...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGAAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAADGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTGCAGCCGGGGACACCTaGGCCGCCCGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTPNSQGISREGTCQRPPAAGDT*AARCAQ
Trigger: CTGGGCACAGCGGGCGGCTCAGGTGTCCCCGGCTGC...AGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AAAAGAHSARHTSPSTRCLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKGLERPPLRPVERLPLQSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCACAAAGCCCCCGCAGGTaGAGCCCCCACTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAAQSPRR*SPHSPC
Trigger: ACAGGGTGAGTGGGGGCTGCACCTGCGGGGGCTTTG...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp CGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACAGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RLRDVPLPRRPVHIPHDTALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...TGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTCCTCCAGGCCTCCCATaGTTTCCGGGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPPPGLP*FPGSEA
Trigger: AGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCTCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTSREGT*QRPPPG
Trigger: GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGA...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGTCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGSREGT*QRPPPG
Trigger: GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGA...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGATCAGTGGGGAGTaGCACCTCTGCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCRISGE*HLCPQW
Trigger: CCACTGGGGGCAGAGGTGGCACTCCCCACTGATCCT...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCTGCCATCAGAACTGCTaGCCGGGGCTTCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGCHQNC*PGLPLP
Trigger: AGGTAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCA...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGGCCTGCCATCAGAACTaGTGCCCGGGGCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMACHQN*CPGLPL
Trigger: TAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCAGGC...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTRTAPR*SPPSQT
Trigger: CGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTTCACCATCCACTCGATGCCCTCGCGCACCCCTTTGCCTGTGAGGGCCGAGCAGGGCCTCCTCCTCGATaGGGCGGAGACAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: LHHPLDALAHPFACEGRAGPPPR*GGDSHG
Trigger: CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCC...TGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618568.4
CDS-3UTR CCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAASQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: RKGLERPPLRPVERLPLQRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: PRKAAAAPCGKAAAAGPGGPRWW*FWIDSS
Trigger: GGATGAGTCTATCCAAAATCACCACCACCGTGGGCC...CCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGCCTCAGGGAATGAGCTaGACCGCGTCCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGPQGMS*TASQRP
Trigger: AGGCCGCTGGGACGCGGTTCAGCTCATTCCCTGAGG...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607873.1
ENST00000614942.4
CDS-3UTR TCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCGCGGCTGCGCCTACGTaGTGTCCCTCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLAAAPT*CPSAAA
Trigger: CGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGC...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGTCCTGCTCACAGCAATaGCTGCGACCTCTCCGCATA +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQSCSQQ*LRPLRI
Trigger: TATGCGGAGAGGTCGCAGTCATTGCTGTGAGCAGGA...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR TCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGCACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASKGRRCALWKGCRCRAWSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...CCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRALGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCTGGAAAGGCTGCCGCTaGAGGGCCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITIWKGCR*RAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCA...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCATCCACTCGATGCCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGGTGTGAGGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSTRCPRAPLCCEDSGCEALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...CTCACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGCCTCGCGCACCCCTTTaGTGTGAAGACAGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: ERASKGRRCALWKGCRCRPRAPL*CEDSGC
Trigger: ACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGG...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp GCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AAAAGAHSARHTSPSTRCALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...GCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRQRGCAYVMSLCRGGRCNRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...GCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCTCCGCAGGAAGGGAGTaGCTGGACTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPSAGRE*LDSPGP
Trigger: TGGGCCTGGAGAGTCCAGGCACTCCCTTCCTGCGGA...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCCAGCCCCGCAGCTGCTaGGCCACCCCCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVQPRSC*ATPTLT
Trigger: AGTCAGGGTGGGGGTGGCGCAGCAGCTGCGGGGCTG...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCTCCTGGGAACCAACCTaGAGAACACACACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SKGRRCALWKGCRCRAWASWEPT*RTHTGS
Trigger: GGACCCTGTGTGTGTTCTGCAGGTTGGTTCCCAGGA...GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCCTCCAGGCCTCCCATaGTTTCCGGGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVPPGLP*FPGSEA
Trigger: AGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGGGGAGTGCCACCTCTaGCCCCAGTGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRGECHL*PQWLWH
Trigger: GTGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCC...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCTGAGCCGCCCGCTGTaGCCAGATCCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRLSRPL*PDPSGC
Trigger: GCAGCCTGAGGGATCTGGGCACAGCGGGCGGCTCAG...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGCTGAGCCGCCCGCTGTaGCCAGATCCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGLSRPL*PDPSGC
Trigger: GCAGCCTGAGGGATCTGGGCACAGCGGGCGGCTCAG...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCCGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTRTAPR*SPPSQT
Trigger: CGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCG...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGCGCCGCTGCGCCCTGTaGAAAGGCTGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQASHAFREVKLLPLWGRRRCAL*KGCRCR
Trigger: CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCG...CCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RRQRGCAYVMSLCRGGRCFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...GCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRTRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGGCGAGGGTCAGGGCCTaGGAGGGTATCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQARVRA*EGIIAG
Trigger: TCCAGCAATGATACCCTCCCAGGCCCTGACCCTCGC...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGGCGAGGGTCAGGGCCTaGGAGGGTATCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQARVRA*EGIIAG
Trigger: TCCAGCAATGATACCCTCCCAGGCCCTGACCCTCGC...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGAGTGGCTGTGGCACGTaGCAGGGGCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPSGCGT*QGPLKL
Trigger: GAGCTTCAGGGGCCCCTGCCACGTGCCACAGCCACT...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGCCCTGGGAGGATCAGTaGGGAGTGCCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPPWEDQ*GVPPLP
Trigger: GGGCAGAGGTGGCACTCCCCACTGATCCTCCCAGGG...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCACCCTGGGAGGATCAGTaGGGAGTGCCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPPWEDQ*GVPPLP
Trigger: GGGCAGAGGTGGCACTCCCCACTGATCCTCCCAGGG...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: WQPWLTGLLLDGAETATGGPRWW*FWIDSS
Trigger: GGATGAGTCTATCCAAAATCACCACCACCGTGGGCC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTCTCTGGGGCAGGCTCTaGAGCCTCCCGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRLWGRL*SLPMHP
Trigger: TGGGTGCATCGGGAGGCTTCAGAGCCTGCCCCAGAG...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTATGCTTTCCGGGAAGTaGAGCTTCTCCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTGLLLDGAETATGSPEGMLSGK*SFSLSG
Trigger: CCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCAT...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCCACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: SSSMGRRQPRGLPRVPQGHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...GCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: AMADGPPPRWGGDSHGVSSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...GGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITICRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCCGACGGCAGCGCGGCTaGGCCTACGTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVRRQRG*AYVMSL
Trigger: GAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCG...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCCTGGGCCAGCCGGGCTaGCAGACTCCCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSLGQPG*QTPLQS
Trigger: GCTTTGGAGGGGAGTCTGGCAGCCCGGCTGGCCCAG...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCGCCCTGTGGAAAGGCTaGCGCTGCAGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLALWKG*RCRAWA
Trigger: GGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGC...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SAAAAGAHSARHTSPSTRSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...TCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRASKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCATTCCGGCCCCTCCCCTaGTCGCGGGACTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPFRPLP*SRDYPA
Trigger: GGCTGGGTAGTCCCGCGAGCAGGGGAGGGGCCGGAA...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTGGGAACCAACCTaGAGAACACACACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLDGAETATGSPEGPTGLSWEPT*RTHTGS
Trigger: GGACCCTGTGTGTGTTCTGCAGGTTGGTTCCCAGGA...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGGCCTGCCATCAGAACTaGTGCCCGGGGCTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGACHQN*CPGLPL
Trigger: TAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCAGGC...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTTCACCATCCACTCGATGCCCTCGCGCACCCCTTTGCCTGTGAGGGCCGAGCAGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHHPLDALAHPFACEGRAARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...TGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618568.4
CDS-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRASQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSSMGRRQPRGLPRVPQGPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: KGLERPPLRPVERLPLQGPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCACTCGGCAGGCCCAGTaGGGTCCGTGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITITRQAQ*GPCRED
Trigger: GTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGT...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGGGAGGGTATCATTGCTaGAAGAACAGGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQGGYHC*KNRMGL
Trigger: GAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCC...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGCACCTCTGCCCCCAGTaGCTGTGGCACGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQHLCPQ*LWHVAG
Trigger: CCCTGCCACGTGCCACAGCCACTGGGGGCAGAGGTG...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGCCCTGGGAGGATCAGTaGGGAGTGCCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGPWEDQ*GVPPLP
Trigger: GGGCAGAGGTGGCACTCCCCACTGATCCTCCCAGGG...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTCCCTGGGAGGATCAGTaGGGAGTGCCACCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRPWEDQ*GVPPLP
Trigger: GGGCAGAGGTGGCACTCCCCACTGATCCTCCCAGGG...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMGPRWW*FWIDSS
Trigger: GGATGAGTCTATCCAAAATCACCACCACCGTGGGCC...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQGPRWW*FWIDSS
Trigger: GGATGAGTCTATCCAAAATCACCACCACCGTGGGCC...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PPPRWGGDSHGVSRGSHRLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...CCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCTTGATGTCAGGGATTaGGAGGCACGTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: AARLRLRDVPLPRRPVHILDVRD*EARLHI
Trigger: GATGTGGAGACGTGCCTCTCAATCCCTGACATCAAG...AATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612157.4
CDS-3UTR TCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GACACTGGGCAGGCCGCTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTGGGATTAGGGTGAGGTaGAGCCAGGCCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DTGQAAPAHSQTEEEHSTGIRVR*SQAQAW
Trigger: CCACGCCTGGGCCTGGCTTCACCTCACCCTAATCCC...AGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAGCGGCCTGCCCAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGCCCGGGGGATTAGGGTaGGGTGAAGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQPGGLG*GEARPR
Trigger: CCTGGGCCTGGCTTCACCTCACCCTAATCCCCCGGG...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGTGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCATGCACTCACCCTGGGTaGCACTGGGCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPCTHPG*HWAGRS
Trigger: GGAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCA...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCAAGGGCCCGACTCCTGTaGGTCACAGCCCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPRARLL*VTAPQL
Trigger: CAGCTGCGGGGCTGTGACTCACAGGAGTCGGGCCCT...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCCTCTGGGGCAGGCTCTaGAGCCTCCCGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGLWGRL*SLPMHP
Trigger: TGGGTGCATCGGGAGGCTTCAGAGCCTGCCCCAGAG...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCACCCTCTGGGGCAGGCTCTaGAGCCTCCCGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: RCTFRTTHFTIHSMPSRTLWGRL*SLPMHP
Trigger: TGGGTGCATCGGGAGGCTTCAGAGCCTGCCCCAGAG...GGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614942.4
CDS-3UTR GCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGCACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITIYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGAYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITIALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGCCCTGTCCCGAGGCTaGATCACAATCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGALSRG*ITIQGP
Trigger: GGGGCCCTGGATTGTGATGCAGCCTCGGGACAGGGC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLLLDGAETATGSPEGPTGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPNRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACCCCCACCCTGACTCATaGCCCTTCCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHPHPDS*PFPAAP
Trigger: AGGAGCTGCTGGGAAGGGGCATGAGTCAGGGTGGGG...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGGAGTGCCACCTCTaGCCCCAGTGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPGECHL*PQWLWH
Trigger: GTGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTAGGATCAGTGGGGAGTaGCACCTCTGCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRRISGE*HLCPQW
Trigger: CCACTGGGGGCAGAGGTGGCACTCCCCACTGATCCT...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCCATCAGAACTGCTaGCCGGGGCTTCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPCHQNC*PGLPLP
Trigger: AGGTAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCA...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAACCAACCTGCAGAACACACACAGGGTCCCCTGGAGAGGACGCGGGGACTTCCAGGGCCGAGCAGGCCTaGGTCAGGCAATCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: EPTCRTHTGSPGEDAGTSRAEQA*VRQSRL
Trigger: CAGGCGAGATTGCCTGACCCAGGCCTGCTCGGCCCT...GGAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGTGTTCTGCAGGTTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PRKAAAAPCGKAAAAGPGFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...CCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ERASKGRRCALWKGCRCRWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGATCCAGGGCCCCCGCTaGCCTTTGGGAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGIQGPR*PLGTWP
Trigger: AGGCCATGTTCCCAAAGGCCAGCGGGGGCCCTGGAT...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: EHSTRQAQWGPCREDPRTPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGCTGGGGGAGGGCTCTaGACCCCCACAAACACTCCC +
Preference number: 4 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQAGGGL*TPTNTP
Trigger: GGGAGTGTTTGTGGGGGTCCAGAGCCCTCCCCCAGC...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGAAACGGGGACGGCCCTaGGGGGAGCGGACTACAGGG +
Preference number: 4 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRKRGRP*GERTTG
Trigger: CCCTGTAGTCCGCTCCCCCCAGGGCCGTCCCCGTTT...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR CCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACACACACAGGGTCCCCTaGAGAGGACGCGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHTHRVP*RGRGDF
Trigger: GAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGT...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTACACACAGGGTCCCCTaGAGAGGACGCGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRTHRVP*RGRGDF
Trigger: GAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGT...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCACACCTCTGCCCCCAGTaGCTGTGGCACGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPHLCPQ*LWHVAG
Trigger: CCCTGCCACGTGCCACAGCCACTGGGGGCAGAGGTG...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PERASKGRRCALWKGCRCLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCTTGATGTCAGGGATTaGGAGGCACGTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPLDVRD*EARLHI
Trigger: GATGTGGAGACGTGCCTCTCAATCCCTGACATCAAG...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGATGGCAGCCATGGCTaGCGGGCCTCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPDGSHG*RASSSM
Trigger: CATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCATC...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAACCTTCTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAATFSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAAGGT...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: EEEHSTRQAQWGPCREDPSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...GGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGTACGTGATGTCCCTCTaGCGCGGCGGCCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQYVMSL*RGGRCT
Trigger: TGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTA...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPNSQGISREGTCQRPPSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...AGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGCCTCGCGCACCCCTTTaGTGTGAAGACAGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLPTARLRKNTALGRPSGPRAPL*CEDSGC
Trigger: ACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGG...CCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTCCGCAGGAAGGGAGTaGCTGGACTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPSAGRE*LDSPGP
Trigger: TGGGCCTGGAGAGTCCAGGCACTCCCTTCCTGCGGA...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCCCCCACCCTGACTCATaGCCCTTCCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSPHPDS*PFPAAP
Trigger: AGGAGCTGCTGGGAAGGGGCATGAGTCAGGGTGGGG...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCTGGGAGGGTATCATTaGTGGAAGAACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMLGGYH*WKNRMG
Trigger: CCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAG...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGCTGGGAGGGTATCATTaGTGGAAGAACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGLGGYH*WKNRMG
Trigger: CCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAG...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: AAAAGAHSARHTSPSTRCSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGCCAGATGGCAGCCATaGCTGACGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVSLLEEQDGAQASPSRRARWQP*LTGLLL
Trigger: GAGGAGGAGGCCCGTCAGCCATGGCTGCCATCTGGC...CCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PRWGGDSHGVSRGSHRAVFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...GACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCACCGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RCTFRTTHFTIHSMPSRTAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...GGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GACACTGGGCAGGCCGCTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: DTGQAAPAHSQTEEEHSTAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...AGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAGCGGCCTGCCCAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCAGCCAGGCCCAGGCGTaGGGTATAGGTCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPSQAQA*GIGLPP
Trigger: CGGGGGAAGACCTATACCCCACGCCTGGGCCTGGCT...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGAATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGACACACAGGGTCCCCTaGAGAGGACGCGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPTHRVP*RGRGDF
Trigger: GAAGTCCCCGCGTCCTCTCCAGGGGACCCTGTGTGT...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCAAGTGGCTGTGGCACGTaGCAGGGGCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPSGCGT*QGPLKL
Trigger: GAGCTTCAGGGGCCCCTGCCACGTGCCACAGCCACT...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAAGTGGCTGTGGCACGTaGCAGGGGCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPSGCGT*QGPLKL
Trigger: GAGCTTCAGGGGCCCCTGCCACGTGCCACAGCCACT...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: QPSRRQRGCAYVMSLCRGQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...GCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp TCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACACCTTCTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLCRGGRCTFRTTHFTIHTFSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAAGGT...GTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612157.4
CDS-3UTR GCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGCACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLCRGGRCTFRTTHFTIHSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...GTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GACACTGGGCAGGCCGCTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: DTGQAAPAHSQTEEEHSTSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...AGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAGCGGCCTGCCCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCTCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ATGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: MAAMADGPPPRWGGDSHGSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGGACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LQASHAFREVKLLPLWGRTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...CCTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGAGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMNRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGCAGCGTGTACATCCTaGCCTGGGCACCCCAACATA +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRAACTS*PGHPNI
Trigger: TATGTTGGGGTGCCCAGGGCAGGATGTACACGCTGC...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCCCCACCCTGACTCATaGCCCTTCCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLPHPDS*PFPAAP
Trigger: AGGAGCTGCTGGGAAGGGGCATGAGTCAGGGTGGGG...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGTCCTGGGAACCAACCTaGAGAACACACACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PPDQQHGSQQEATPPAPGSWEPT*RTHTGS
Trigger: GGACCCTGTGTGTGTTCTGCAGGTTGGTTCCCAGGA...CCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCATCCCGAGAGGGGACCTaGCAAAGACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPSREGT*QRPPPG
Trigger: GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGA...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCTGCCATCAGAACTGCTaGCCGGGGCTTCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGACHQNC*PGLPLP
Trigger: AGGTAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCA...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCGGCACGTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGAGTSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGACGTGCC...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614942.4
CDS-3UTR CCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPRTAPR*SPPSQT
Trigger: CGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCG...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCCCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGAAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SAAAAGAHSARHTSPSTRSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...TCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTGAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: LSSPVTPSPCPTARSLHPRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...AGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGGACACAGGGCCCCACAGAGAACCCCTCCGGGAGGTTCTCTCCTGGCTGGGGGTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GTQGPTENPSGRFSPGWGFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...CCCCCAGCCAGGAGAGAACCTCCCGGAGGGGTTCTCTGTGGGGCCCTGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: PQISSMGANRRPLLQHQGPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTATTTTGCACTCACCCTaGGTGACACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRILHSP*VTLGRP
Trigger: CGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAAT...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGCGAGGGTCAGGGCCTaGGAGGGTATCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGARVRA*EGIIAG
Trigger: TCCAGCAATGATACCCTCCCAGGCCCTGACCCTCGC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GCCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGCTTGATGTCAGGGATTaGGAGGCACGTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: AHSQTEEEHSTRQAQWGPLDVRD*EARLHI
Trigger: GATGTGGAGACGTGCCTCTCAATCCCTGACATCAAG...CGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGACCTTCTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRTFSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAAGGT...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCATCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCATCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAASKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGAAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RDVPLPRRPVHIPHDTLHGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...GTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCTCCTGGGAACCAACCTaGAGAACACACACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCSWEPT*RTHTGS
Trigger: GGACCCTGTGTGTGTTCTGCAGGTTGGTTCCCAGGA...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGCCTCCAGGCCTCCCATaGTTTCCGGGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQPPGLP*FPGSEA
Trigger: AGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGCACGTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPGTSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGACGTGCC...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCACGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACG +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPRTAPR*SPPSQT
Trigger: CGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCG...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCACCCAGATCAGCAGCATaGGAGCCAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPPRSAA*EPTGGH
Trigger: GTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGG...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GACACTGGGCAGGCCGCTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTAGCCAGCCTGAGCACTaGAGCCCCAATTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: DTGQAAPAHSQTEEEHSTSQPEH*SPNSQP
Trigger: TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCT...AGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAGCGGCCTGCCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTGGCCTTTGGGAACATaGCCTGGGTCTTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PTARLRKNTALGRPSGVRWPLGT*PGSSSR
Trigger: CCTTGAGGAAGACCCAGGCCATGTTCCCAAAGGCCA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: GFPYLRQTLPGRISGECHPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCCCCAACTTGCGGGGCTaGGGCATAAAAACAGCCACT +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRAPNLRG*GIKTAT
Trigger: AGTGGCTGTTTTTATGCCCCAGCCCCGCAAGTTGGG...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGAGGAGGGTATCATTGCTaGAAGAACAGGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGGGYHC*KNRMGL
Trigger: GAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCC...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GACACTGGGCAGGCCGCTCCTGCCCACAGCCAGACTGAGGAAGAACACAGCACTGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: DTGQAAPAHSQTEEEHSTGPRWW*FWIDSS
Trigger: GGATGAGTCTATCCAAAATCACCACCACCGTGGGCC...AGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGGCAGGAGCGGCCTGCCCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: QPLPAGPLSFLHQSAPSRLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...CCGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCCTTGATGTCAGGGATTaGGAGGCACGTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRALDVRD*EARLHI
Trigger: GATGTGGAGACGTGCCTCTCAATCCCTGACATCAAG...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCATGCTTTCCGGGAAGTaGAGCTTCTCCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITIMLSGK*SFSLSG
Trigger: CCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCAT...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGCAGCCGGGGACACCTaGGCCGCCCGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKAAGDT*AARCAQ
Trigger: CTGGGCACAGCGGGCGGCTCAGGTGTCCCCGGCTGC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGCTTGATGTCAGGGATTaGGAGGCACGTCAAACGCCT +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRLDVRD*EARQTP
Trigger: AGGCGTTTGACGTGCCTCTCAATCCCTGACATCAAG...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSSGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCATCCACTCGATGCCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGGTGTGAGTCAGGCAATCTCGCCTaGCGATCTTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PSTRCPRAPLCCEDSGCESGNLA*RSCWCS
Trigger: ACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGA...CTCACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCAGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGCCCCCTCAGCTTTTTaGATCAGTCAGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RVSLLEEQDGAQASPSRRAPSAF*ISQLPP
Trigger: GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGC...CCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCCTCCAGGCCTCCCATaGTTTCCGGGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLPPGLP*FPGSEA
Trigger: AGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGAAAACTGGTTGTAGTTaGACAGCTACTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQKTGCS*TATGRA
Trigger: TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTT...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCGTGTACATCCTGCCCTaGGCACCCCAACATAGGTCA +
Preference number: 4 (lower is better)
Translates to: YHCWKNRMGLRPALVAGAVYILP*APQHRS
Trigger: TGACCTATGTTGGGGTGCCCAGGGCAGGATGTACAC...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612256.4
3UTR CAA 72 bp GAAGGGATGGACAGAGCCACACTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACACTGGGCAGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EGMDRATLAVFI*HSPWVTLGRPL
Trigger: GAGCGGCCTGCCCAGTGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAGTGTGGCTCTGTCCATCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGATGCTTTCCGGGAAGTaGAGCTTCTCCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRMLSGK*SFSLSG
Trigger: CCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCAT...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCACCCTTGATGTCAGGGATTaGGAGGCACGTCAAACGCCT +
Preference number: 4 (lower is better)
Translates to: RCTFRTTHFTIHSMPSRTLDVRD*EARQTP
Trigger: AGGCGTTTGACGTGCCTCTCAATCCCTGACATCAAG...GGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCAGGTCAATCGGGTTTTCGACTaGTCCAGGAAGGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PHAAQASLSTGAPIPNQVNRVFD*SRKVCV
Trigger: GACGCAGACCTTCCTGGAGCAGTCGAAAACCCGATT...GACCTGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607873.1
CDS-3UTR GCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCACACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCACACGTCTCCACATCCTaGTTGTTGGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPHVSTS*LLASTK
Trigger: CTTGGTGCTGGCCAACAAGCAGGATGTGGAGACGTG...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCACCGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RCTFRTTHFTIHSMPSRTGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...GGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRNRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCGCTCACAGCAATGACTaGGACCTCTCCGCATACACA +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGAHSND*DLSAYT
Trigger: TGTGTATGCGGAGAGGTCGCAGTCATTGCTGTGAGC...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCCTGGGAGGGTATCATTaGTGGAAGAACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: PNSQGISREGTCQRPPPGLGGYH*WKNRMG
Trigger: CCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAG...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGCTGGGAGGGTATCATTaGTGGAAGAACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQLGGYH*WKNRMG
Trigger: CCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAG...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAAAAACTGGTTGTAGTTaGACAGCTACTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPKTGCS*TATGRA
Trigger: TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTT...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGAAGGGCAGAAGCCAGATaGCAGCCATGGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGRAEAR*QPWLTG
Trigger: GCCCGTCAGCCATGGCTGCCATCTGGCTTCTGCCCT...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: AAAGAHSARHTSPSTRCPFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...AGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR TCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CGAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGCTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: RGSGPGRVSLLEEQDGAQLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...CTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCACTAAGTCCCAGAACATaGGCCGAGCCTTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPLSPRT*AEPFPH
Trigger: ATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAG...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCACTTGATGTCAGGGATTaGGAGGCACGTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPLDVRD*EARLHI
Trigger: GATGTGGAGACGTGCCTCTCAATCCCTGACATCAAG...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: RLRDVPLPRRPVHIPHDTQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...TGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTGCCGCGGCGGCCGGTaGACATTCCGCACGACACAC +
Preference number: 4 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSCRGGR*TFRTTH
Trigger: GTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCA...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCATCCACTCGATGCCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGGTGTGAGTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: PSTRCPRAPLCCEDSGCESKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...CTCACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR GCA 90 bp GAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTCCTCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: EQPSNTITVSNSQEPPPSSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...GGAGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGCCCAGTGGGGTCCGTaGAGGGAGGACCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKAQWGP*REDPRT
Trigger: GGTCCTGGGGTCCTCCCTGCACGGACCCCACTGGGC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPLPTHRGFPERGPAKDLGPGSG*STRPSE
Trigger: TTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCC...GAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCAGGCCTGGGTCAGGCAATCTCGCCTGCCGATCTTGCTGGTGCAGTCGCTGAAAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGLGQAISPADLAGAVAENRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...TTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS-3UTR GCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPNRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCAATCGGGTTTTCGACTaGTCCAGGAAGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITINRVFD*SRKVVF
Trigger: GAAGACGACCTTCCTGGAGCAGTCGAAAACCCGATT...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAAAACTGGTTGTAGTTaGACAGCTACTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCKTGCS*TATGRA
Trigger: TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTT...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GTGTCCAACAGCCAGGAGCCTCCACCCTCCAGGAGGGAAGGGATGGACAGAGCCAAAACTGGTTGTAGTTaGACAGCTACTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSNSQEPPPSRREGMDRAKTGCS*TATGRA
Trigger: TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTT...GGCTCTGTCCATCCCTTCCCTCCTGGAGGGTGGAGGCTCCTGGCTGTTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TATPSRPPQLFASVSSLPFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCTTTGGGAACATGGCCTaGGTCTTCCTCAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GIGLPPQASALSRGCITIFGNMA*VFLKAR
Trigger: TCTTGCCTTGAGGAAGACCCAGGCCATGTTCCCAAA...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CTGAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTGGAGGGTATCATTGCTaGAAGAACAGGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSSPVTPSPCPTARSLHPGGYHC*KNRMGL
Trigger: GAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCC...AGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCATCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCCATCCAAAGCCTCCGGATaGCTACGCTTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: YRSSPAGLSPVPRLHHNPSKASG*LRFSRH
Trigger: ATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGA...TGGATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSSKGRR*ALWKGC
Trigger: GCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGA...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTAGGTTCTCTCCTGGCTaGGGGAGGGCTCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSRFSPG*GRALDP
Trigger: GGGGTCCAGAGCCCTCCCCCAGCCAGGAGAGAACCT...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACACCTCTGCCCCCAGTaGCTGTGGCACGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKHLCPQ*LWHVAG
Trigger: CCCTGCCACGTGCCACAGCCACTGGGGGCAGAGGTG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACAAAGCCCCCGCAGGTaGAGCCCCCACTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKQSPRR*SPHSPC
Trigger: ACAGGGTGAGTGGGGGCTGCACCTGCGGGGGCTTTG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAACGGGAGGTTCTCTCCTaGCTGGGGGAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKREVLS*LGEGSG
Trigger: TCCAGAGCCCTCCCCCAGCCAGGAGAGAACCTCCCG...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp CCCACTTATGAATTCCTCCCACTCCCAACTCACAGGGGATTTCCCGAGAGGGGACAACATAGGTCAGTGTaGAGCCAGAAAGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PTYEFLPLPTHRGFPERGQHRSV*SQKAPP
Trigger: GGGAGGTGCTTTCTGGCTGCACACTGACCTATGTTG...TCCCCTCTCGGGAAATCCCCTGTGAGTTGGGAGTGGGAGGAATTCATAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS-3UTR GCA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTGCCATCAGAACTGCTaGCCGGGGCTTCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSCHQNC*PGLPLP
Trigger: AGGTAGGGGAAGCCCCGGGCAGCAGTTCTGATGGCA...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGCCCCCGCTGGCCTTTaGGAACATGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKAPAGL*EHGLGL
Trigger: AAGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR TCA 90 bp CTGTCCTCATGCAGCCCAAGCCAGCCTGAGCACTGGAGCCCCAATTCCCAACCACAGTACTCGTCCTTCTaGAACATGTACTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: LSSCSPSQPEHWSPNSQPQYSSF*NMYLYK
Trigger: CTTGTACAAGTACATGTTTCAGAAGGACGAGTACTG...TGGTTGGGAATTGGGGCTCCAGTGCTCAGGCTGGCTTGGGCTGCATGAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAATCACCATCCACTCGATaGCCTCGCGCACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKSPSTR*PRAPLC
Trigger: GCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGA...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAACAGGGCTGTCCTCATaGAGCCCAAGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKTGLSS*SPSQPE
Trigger: CTCAGGCTGGCTTGGGCTGCATGAGGACAGCCCTGT...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAACCTTCTCAAACGCCTaGTTGGACTCAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKTFSNA*LDSASL
Trigger: GAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAAGGT...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR GCA 90 bp TTTATAAAGCTTTTTCATAAAACTGGTTGTAGTTGCACAGCTACTGGGAGGGCAGGGGAGTGCCACCTCTaGCCCCAGTGGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: FIKLFHKTGCSCTATGRAGECHL*PQWLWH
Trigger: GTGCCACAGCCACTGGGGGCAGAGGTGGCACTCCCC...TGCCCTCCCAGTAGCTGTGCAACTACAACCAGTTTTATGAAAAAGCTTTATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CCA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGGAGGGTATCATTGCTaGAAGAACAGGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKGGYHC*KNRMGL
Trigger: GAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp CACAGCCCAGCAGGGCCGCAGTGGACGGGAGCGACACCTCAGGGCTaGGTGCGGGCAGGACCCAGAGCCCCACGCCCCAGTGGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: HSPAGPQWTGATPQG*VRAGPRAPRPSGGV
Trigger: GACGCCTCCACTGGGGCGTGGGGCTCTGGGTCCTGCCCGCACTCAGCCCTGAGGTGTCGCTCCCGTCCACTGCGGCCCTGCTGGGCTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp CCTCCGGGAGGTTCTCCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTaGGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PPGGSPPERASKGRR*ALWKGCRCRAWASR
Trigger: CCGGCTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGGAGAACCTCCCGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609188.1
CDS-3UTR CAA 90 bp AAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: KGLERPPLRPVERLPLQGPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...GCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TGGCAGCCATGGCTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WQPWLTGLLLDGAETATGGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAGCCATGGCTGCCA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LLDGAETATGSPEGPTGLGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRTQHSAGPVGSVQGGPQPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...CTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PERASKGRRCALWKGCRCGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCCCAGATCAGCAGCATGGGAGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: PQISSMGANRRPLLQHQGPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...CCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCTCCCATGCTGCTGATCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCACCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: RKNTALGRPSGVRAGRTPPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...TGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp ACCTGCCCAGGGCAGCCCACACTGGGGACCCACCAGGCCATGGTGTaGAGTCCCGGCCAGCCTGGCCCCACATGGCACAGCATAGCCAGT +
Preference number: 5 (lower is better)
Translates to: TCPGQPTLGTHQAMV*SPGQPGPTWHSIAS
Trigger: ACTGGCTATGCTGTGCCATGTGGGGCCAGGCTGGCCGGGACTTCACACCATGGCCTGGTGGGTCCCCAGTGTGGGCTGCCCTGGGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp GGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTTTCTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GPRKAAAAPCGKAAAAGPFSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAA...AGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PPERASKGRRCALWKGCRSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LTGLLLDGAETATGSPEGSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AARLRLRDVPLPRRPVHIGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...AATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LTGLLLDGAETATGSPEGVVFPA*SRPRIR
Trigger: CCTGATCCTGGGCCTGGACAATGCTGGGAAGACGAC...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 90 bp TGGGGGCTGGAGGAACCTAGACCACAGCCTGGCCCGTTGAGGGAGTaGACCTGTGGGGCTCTGTGCCAGCACCTCGCACAGGGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: WGLEEPRPQPGPLRE*TCGALCQHLAQGGS
Trigger: ACTCCCTCCCTGTGCGAGGTGCTGGCACAGAGCCCCACAGGTGCACTCCCTCAACGGGCCAGGCTGTGGTCTAGGTTCCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGACGTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMTSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGACGT...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS GCA 90 bp AGGTCCCACACAGAGGCCGCCAACCCCTCAAGGGACCCTGCAGTGTaGCGGCTGTCTGCTGCTGACACAAGGGAGCAGGCGGACCCTAAG +
Preference number: 5 (lower is better)
Translates to: RSHTEAANPSRDPAV*RLSAADTREQADPK
Trigger: CTTAGGGTCCGCCTGCTCCCTTGTGTCAGCAGCAGACAGCCGGCACACTGCAGGGTCCCTTGAGGGGTTGGCGGCCTCTGTGTGGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp GCCTTCCCTGCCAGGACAGGGCCAGAGTCACTGAGCTCAGACCTCTaGAGCCTGGGCTGGTCAGTCCTGGGCTCGCTGGCAACACTCCTG +
Preference number: 5 (lower is better)
Translates to: AFPARTGPESLSSDL*SLGWSVLGSLATLL
Trigger: CAGGAGTGTTGCCAGCGAGCCCAGGACTGACCAGCCCAGGCTGCAGAGGTCTGAGCTCAGTGACTCTGGCCCTGTCCTGGCAGGGAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp CCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCTTCTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PERASKGRRCALWKGCRCFSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAA...GCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGCAGGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: GGDSHGVSRGSHRAVLMQVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...CTGCATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: ERASKGRRCALWKGCRCRVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCCCCAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPERASKGRRCALWKGCRSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...GCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACATCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GLLLDGAETATGSPEGPTSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RKGLERPPLRPVERLPLQSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...CTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCCCCTCGCGCACCCCTTaGCCTGTGAGGGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPPSRTP*PVRAEQ
Trigger: CTGCTCGGCCCTCACAGGCAAAGGGGTGCGCGAGGG...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000612256.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQLAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 90 bp AGACCACAGCCTGGCCCGTTGAGGGAGTGCACCTGTGGGGCTCTGTaGCAGCACCTCGCACAGGGAGGGAGTGTGGCCATGCGGATAAGA +
Preference number: 5 (lower is better)
Translates to: RPQPGPLRECTCGAL*QHLAQGGSVAMRIR
Trigger: TCTTATCCGCATGGCCACACTCCCTCCCTGTGCGAGGTGCTGGCACAGAGCCCCACAGGTGCACTCCCTCAACGGGCCAGGCTGTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp TCTGCAGCCTGGGCTGGTCAGTCCTGGGCTCGCTGGCAACACTCCTaGGCAAGACAGGGCACAGCCCCTGCAGCCTCAGGTACAAGTGCT +
Preference number: 5 (lower is better)
Translates to: SAAWAGQSWARWQHS*ARQGTAPAASGTSA
Trigger: AGCACTTGTACCTGAGGCTGCAGGGGCTGTGCCCTGTCTTGCCCAGGAGTGTTGCCAGCGAGCCCAGGACTGACCAGCCCAGGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp GAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGCCTGGGCCAGACGGTGGTGGTGATTTaGGATAGACTCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: ERPPLRPVERLPLQGLGQTVVVI*DRLIPL
Trigger: CAAGGGGATGAGTCTATCCAAAATCACCACCACCGT...CTGGCCCAGGCCCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SMGRRQPRGLPRVPQGCPSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...AGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACAGGGCTGTCCTCATGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: WGGDSHGVSRGSHRAVLMSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...CATGAGGACAGCCCTGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGATCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CTGACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: LTGLLLDGAETATGSPEGLAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...ACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCCACACTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: GLLLDGAETATGSPEGPTLAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...TGTGGGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGGCCGGTGCACATTACGGTGGTGGTGATTTaGGATAGACTCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: AARLRLRDVPLPRRPVHITVVVI*DRLIPL
Trigger: CAAGGGGATGAGTCTATCCAAAATCACCACCACCGT...AATGTGCACCGGCCGCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGATTCTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGFSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAA...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCATCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAASLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SAAAAGAHSARHTSPSTRSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...TCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp CACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: HSQTEEEHSTRQAQWGPCGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...GCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SQTEEEHSTRQAQWGPCRGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...CCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQLAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: AAAGAHSARHTSPSTRCPVVFPA*SRPRIR
Trigger: CCTGATCCTGGGCCTGGACAATGCTGGGAAGACGAC...AGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp TCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGAACGTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SAAAAGAHSARHTSPSTRTSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGACGT...TCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS CCA 90 bp GAGGCCCTCAGGACCTTGGAGGAACCCCTCTCCAACGTGGAAGTGTaGGTCCACATAGGGCTGCAGCTGTGGCCAGTGCAGGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: EALRTLEEPLSNVEV*VHIGLQLWPVQASL
Trigger: CAGAGATGCCTGCACTGGCCACAGCTGCAGCCCTATGTGGACCCACACTTCCACGTTGGAGAGGGGTTCCTCCAAGGTCCTGAGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp CAGCTGCCTCATGGGCATGACTTGCACCTCATGTCTAGGAGACCCTaGTGGGCAGGAGATGGGGCTGCCATCCCACAGCTGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: QLPHGHDLHLMSRRP*WAGDGAAIPQLSHS
Trigger: GCTGTGGGACAGCTGTGGGATGGCAGCCCCATCTCCTGCCCACCAGGGTCTCCTAGACATGAGGTGCAAGTCATGCCCATGAGGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp GGTATAGGTCTTCCCCCGCAGGCCTCAGCCCTGTCCCGAGGCTGCATCACAATCTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GIGLPPQASALSRGCITISRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...GATTGTGATGCAGCCTCGGGACAGGGCTGAGGCCTGCGGGGGAAGACCTATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCATCCACTCGATGCCCTCGCGCACCCCTTTGCTGTGAAGACAGCGGGTGTGAGGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PSTRCPRAPLCCEDSGCEGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...CTCACACCCGCTGTCTTCACAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR CAA 90 bp AAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTGCAGGGAGGACCCCAGGACCTGGGAGGGTATCATaGCTGGAAGAACAGGATGGG +
Preference number: 5 (lower is better)
Translates to: KNTALGRPSGVRAGRTPGPGRVS*LEEQDG
Trigger: CCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGG...TCCTGGGGTCCTCCCTGCACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp GGACACCAACCCAGGGTCCAGCCCCAGGACGAGGCCAATTCGCAATaGCGCCCCTTTCTGTGGTGCTGGCTCTGCACAAGGATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: GHQPRVQPQDEANSQ*RPFLWCWLCTRMQD
Trigger: ATCCTGCATCCTTGTGCAGAGCCAGCACCACAGAAAGGGGCGTCATTGCGAATTGGCCTCGTCCTGGGGCTGGACCCTGGGTTGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 90 bp GCAGCAAGCCCAGTGAGAGAATCTCCACGTGGCTCCTGGGGCTTCTaGGCAGGGTGGCAGAAGGTTCATGTGCAACCGGGTCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: AASPVRESPRGSWGF*AGWQKVHVQPGPGP
Trigger: TGGTCCAGGACCCGGTTGCACATGAACCTTCTGCCACCCTGCTCAGAAGCCCCAGGAGCCACGTGGAGATTCTCTCACTGGGCTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 90 bp TGTCCCCAGACGCTGCTCCTGAGAACCTGCCGGCAACCTTTGGCCTaGTGGTGGCCAAAGGTGAAAGACAGGGATTGGGCCAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: CPQTLLLRTCRQPLA*WWPKVKDRDWARRG
Trigger: ACCACGCCTGGCCCAATCCCTGTCTTTCACCTTTGGCCACCATCAGGCCAAAGGTTGCCGGCAGGTTCTCAGGAGCAGCGTCTGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 90 bp GTAACTTCTCCCAGGTCAGCCGCCACTGTGTCCTGCTCACAGCAATaGCTGCGACCTCTCCGCATACACATCGGTTCCGGCCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VTSPRSAATVSCSQQ*LRPLRIHIGSGPSP
Trigger: AGGGGAGGGGCCGGAACCGATGTGTATGCGGAGAGGTCGCAGTCATTGCTGTGAGCAGGACACAGTGGCGGCTGACCTGGGAGAAGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS TCA 90 bp CTTACAGGCTGGGGGCAACAGAGCCACCCCAGAGAAGGCAGGAAGTaGAGATTCACCTGGCCCTCTGGACGCCGGGCTGCTTCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: LTGWGQQSHPREGRK*RFTWPSGRRAASVQ
Trigger: TTGCACAGAAGCAGCCCGGCGTCCAGAGGGCCAGGTGAATCTTCACTTCCTGCCTTCTCTGGGGTGGCTCTGTTGCCCCCAGCCTGTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS GCA 90 bp CATTTTGGTTTCTGTGGGACCCACTTTGGCTGCAAAGAGCCACACTaGCAGGTCACACCTGCCCAGGGCAGCCCACACTGGGGACCCACC +
Preference number: 5 (lower is better)
Translates to: HFGFCGTHFGCKEPH*QVTPAQGSPHWGPT
Trigger: GGTGGGTCCCCAGTGTGGGCTGCCCTGGGCAGGTGTGACCTGGCAGTGTGGCTCTTTGCAGCCAAAGTGGGTCCCACAGAAACCAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp CGGCTCTGTGGAGGCTGCAGCAAGCCCAGTGAGAGAATCTCCACGTaGCTCCTGGGGCTTCTGAGCAGGGTGGCAGAAGGTTCATGTGCA +
Preference number: 5 (lower is better)
Translates to: RLCGGCSKPSERIST*LLGLLSRVAEGSCA
Trigger: TGCACATGAACCTTCTGCCACCCTGCTCAGAAGCCCCAGGAGCCACGTGGAGATTCTCTCACTGGGCTTGCTGCAGCCTCCACAGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp CCTCCAGGCCTCCCATGCTTTCCGGGAAGTGAAGCTTCTCCCTCTCTGGGGCAGTTCTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PPGLPCFPGSEASPSLGQFSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAA...CTGCCCCAGAGAGGGAGAAGCTTCACTTCCCGGAAAGCATGGGAGGCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612256.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCCACAGCCAGACTGAGGAAGAACACAGCACTCGGCAGGCCCAGTGGGGTCCGTTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PTARLRKNTALGRPSGVRSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...ACGGACCCCACTGGGCCTGCCGAGTGCTGTGTTCTTCCTCAGTCTGGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CTGAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTTCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LSSPVTPSPCPTARSLHPSRLPI*LVQSLK
Trigger: CTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGA...AGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGGGCCCCCTCAGCTTTTaGCATCAGTCAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRGPLSF*HQSAPS
Trigger: GGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCC...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPVVFPA*SRPRIR
Trigger: CCTGATCCTGGGCCTGGACAATGCTGGGAAGACGAC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCACCCCTTTGCTGGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: FRTTHFTIHSMPSRTPLLVVFPA*SRPRIR
Trigger: CCTGATCCTGGGCCTGGACAATGCTGGGAAGACGAC...CAGCAAAGGGGTGCGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612157.4
ENST00000614942.4
CDS-3UTR CAA 90 bp CTGAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LSSPVTPSPCPTARSLHPVVFPA*SRPRIR
Trigger: CCTGATCCTGGGCCTGGACAATGCTGGGAAGACGAC...AGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GGCTTCCCCTACCTCAGACAGACCCTCCCTGGGAGGATCAGTGGGGAGTGCCACCCTGGGAGGGTATCATaGCTGGAAGAACAGGATGGG +
Preference number: 5 (lower is better)
Translates to: GFPYLRQTLPGRISGECHPGRVS*LEEQDG
Trigger: CCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGG...GTGGCACTCCCCACTGATCCTCCCAGGGAGGGTCTGTCTGAGGTAGGGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 90 bp ACTCCGCGTCCACGTGGAGCAGACAACAGCTCACATTTGCCACTTTaGCTCCAGGCTGTGCCAGCTCTCCTGTCCAGGCATGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: TPRPRGADNSSHLPL*LQAVPALLSRHECP
Trigger: TGGGCACTCATGCCTGGACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGTCTGCTCCACGTGGACGCGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp ATGCGGATAAGACTGACCAGCGCCATCTACGAAGCGAGCCTTCCCTaGCAGGACAGGGCCAGAGTCACTGAGCTCAGACCTCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: MRIRLTSAIYEASLP*QDRARVTELRPLQP
Trigger: AGGCTGCAGAGGTCTGAGCTCAGTGACTCTGGCCCTGTCCTGGCAGGGAAGGCTCGCTTCGTAGATGGCGCTGGTCAGTCTTATCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp GGCACTCAAGGAAGGGCTGTGCAGCCCCAAGACCAGCAGCAAGGATaGGCTACAGTGGCCCCCTTAAGTCTCCCTCTTCCAGTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: GTQGRAVQPQDQQQG*ATVAPLSLPLPVSP
Trigger: AGGCGAAACTGGAAGAGGGAGACTTAAGGGGGCCACTGTAGCCCATCCTTGCTGCTGGTCTTGGGGCTGCACAGCCCTTCCTTGAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp GAGCCACCCCAGAGAAGGCAGGAAGTGAAGATTCACCTGGCCCTCTaGACGCCGGGCTGCTTCTGTGCAAAGCCACTCCAAGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: EPPQRRQEVKIHLAL*TPGCFCAKPLQENS
Trigger: GCTGTTCTCTTGGAGTGGCTTTGCACAGAAGCAGCCCGGCGTCCAGAGGGCCAGGTGAATCTTCACTTCCTGCCTTCTCTGGGGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS-3UTR CAA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CAGCCGTCCCGACGGCAGCGCGGCTGCGCCTACGTGATGTCCCTCTGCCGCGGCGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: QPSRRQRGCAYVMSLCRGDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...GCCGCGGCAGAGGGACATCACGTAGGCGCAGCCGCGCTGCCGTCGGGACGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp CGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGATGCCCTCGCGCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: RPVHIPHDTLHHPLDALALAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...CGCGAGGGCATCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp ACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGCCTGGGAGGGTATCATaGCTGGAAGAACAGGATGGG +
Preference number: 5 (lower is better)
Translates to: TATPSRPPQLFASVSSLPPGRVS*LEEQDG
Trigger: CCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGG...CGGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCCAACTCACAGGGGATTTCCCGAGAGGGGACCTGCCAAAGACCTCCTCCAGGCCCTGGGAGGGTATCATaGCTGGAAGAACAGGATGGG +
Preference number: 5 (lower is better)
Translates to: PNSQGISREGTCQRPPPGPGRVS*LEEQDG
Trigger: CCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGG...GCCTGGAGGAGGTCTTTGGCAGGTCCCCTCTCGGGAAATCCCCTGTGAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp TCAGGGGTCCCGGCCACTAGAGCAGCACATACTCAGCAGACACGCTaGATGACGAGCCACAGCTGCCTCATGGGCATGACTTGCACCTCA +
Preference number: 5 (lower is better)
Translates to: SGVPATRAAHTQQTR*MTSHSCLMGMTCTS
Trigger: TGAGGTGCAAGTCATGCCCATGAGGCAGCTGTGGCTCGTCATTCAGCGTGTCTGCTGAGTATGTGCTGCTCTAGTGGCCGGGACCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp CATCAGGGGAGAGGCAGCCATCCTGCCGTCCCCACATCTGGTCTTTaGCATTTCTGTGTCCTGTGGTGGTCAGCAGCAAGGTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: HQGRGSHPAVPTSGL*HFCVLWWSAARSLS
Trigger: GCTCAGAGACCTTGCTGCTGACCACCACAGGACACAGAAATGGCAAAGACCAGATGTGGGGACGGCAGGATGGCTGCCTCTCCCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS GCA 90 bp CACAGCAAACTCCGCGTCCACGTGGAGCAGACAACAGCTCACATTTaGCACTTTGCCTCCAGGCTGTGCCAGCTCTCCTGTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: HSKLRVHVEQTTAHI*HFASRLCQLSCPGM
Trigger: CATGCCTGGACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGTCTGCTCCACGTGGACGCGGAGTTTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp TCTGCCGCGGCGGCCGGTGCACATTCCGCACGACACACTTCACCATCCACTCGAACGGTGGTGGTGATTTaGGATAGACTCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SAAAAGAHSARHTSPSTRTVVVI*DRLIPL
Trigger: CAAGGGGATGAGTCTATCCAAAATCACCACCACCGT...TCGAGTGGATGGTGAAGTGTGTCGTGCGGAATGTGCACCGGCCGCCGCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612157.4
ENST00000614942.4
ENST00000618568.4
CDS-3UTR CAA 90 bp GACGGGCCTCCTCCTCGATGGGGCGGAGACAGCCACGGGGTCTCCCGAGGGTCCGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: DGPPPRWGGDSHGVSRGSDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...GGACCCTCGGGAGACCCCGTGGCTGTCTCCGCCCCATCGAGGAGGAGGCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp TATCATTGCTGGAAGAACAGGATGGGGCTCAGGCCAGCCCTAGTCGCCGGGGCCCTCGCCGTCTTTATTTaGCACTCACCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: YHCWKNRMGLRPALVAGALAVFI*HSPWVT
Trigger: TGTCACCCAGGGTGAGTGCAAAATAAAGACGGCGAG...GGCCCCGGCGACTAGGGCTGGCCTGAGCCCCATCCTGTTCTTCCAGCAATGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 90 bp GGAAGTGAAGATTCACCTGGCCCTCTGGACGCCGGGCTGCTTCTGTaGAAAGCCACTCCAAGAGAACAGCTAGAACTCAGCGTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: GSEDSPGPLDAGLLL*KATPREQLELSVAS
Trigger: ACTGGCCACGCTGAGTTCTAGCTGTTCTCTTGGAGTGGCTTTGCACAGAAGCAGCCCGGCGTCCAGAGGGCCAGGTGAATCTTCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS GCA 90 bp CCAGGTCCCCACACTTTGTCTTGTCCTGACTTGTCCCACAAAGACTaGAGCTCTTCCTGCCCTCCTAAGTCCCAGAACATGAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PGPHTLSCPDLSHKD*SSSCPPKSQNMSRA
Trigger: GGCTCGGCTCATGTTCTGGGACTTAGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAAGTCAGGACAAGACAAAGTGTGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424545.2
CDS GCA 90 bp GTGGAGCAGACAACAGCTCACATTTGCCACTTTGCCTCCAGGCTGTaGCAGCTCTCCTGTCCAGGCATGAGTGCCCAGAGACCTAGAACT +
Preference number: 5 (lower is better)
Translates to: VEQTTAHICHFASRL*QLSCPGMSAQRPRT
Trigger: AGTTCTAGGTCTCTGGGCACTCATGCCTGGACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGTCTGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp GAGGGTCAGGGCCTGGGAGGGTATCATTGCTGGAAGAACAGGATGGGGCTCAGGACGGTGGTGGTGATTTaGGATAGACTCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: EGQGLGGYHCWKNRMGLRTVVVI*DRLIPL
Trigger: CAAGGGGATGAGTCTATCCAAAATCACCACCACCGT...CCTGAGCCCCATCCTGTTCTTCCAGCAATGATACCCTCCCAGGCCCTGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CTGAGCAGCCCAGTAACACCATCACCGTGTCCAACAGCCAGGAGCCTCCACCCTACGGTGGTGGTGATTTaGGATAGACTCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSSPVTPSPCPTARSLHPTVVVI*DRLIPL
Trigger: CAAGGGGATGAGTCTATCCAAAATCACCACCACCGT...AGGGTGGAGGCTCCTGGCTGTTGGACACGGTGATGGTGTTACTGGGCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612256.4
ENST00000614942.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp AGCCAACAGGAGGCCACTCCTCCAGCACCAGGGGACCAGCCGTCCCGACGGCAGGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: SQQEATPPAPGDQPSRRQDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...CTGCCGTCGGGACGGCTGGTCCCCTGGTGCTGGAGGAGTGGCCTCCTGTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGGGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: ERASKGRRCALWKGCRCRDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...CCTGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGGCCCCCGCTGGCCTTaGGGAACATGGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKGPRWP*GTWPGS
Trigger: AGACCCAGGCCATGTTCCCAAAGGCCAGCGGGGGCC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp TTGGAGGAGTGCAGGGTCCCCAGGTCCCCACACTTTGTCTTGTCCTaGCTGAGAAAGAAACAGACTGCCCTGACCTCTCTGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LEECRVPRSPHFVLS*LRKKQTALTSLTWP
Trigger: TGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCTCAGTCAGGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp CAGGTCCCCACACTTTGTCTTGTCCTGACTGAGAAAGAAACAGACTaGCCTGACCTCTCTGACTTGGCCAGCGAGGTTGCCCTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: QVPTLCLVLTEKETD*PDLSDLASEVALRL
Trigger: GAGCCTAAGGGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCTCAGTCAGGACAAGACAAAGTGTGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp CCGGCCTGTGACAAGATCATCATCATCTGTGTCACTCCCCAAGCATaGTGCGCACTGGACACACAGGCCCTGACTCAACTTGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: PACDKIIIICVTPQA*CALDTQALTQLVLS
Trigger: AGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCATGCTTGGGGAGTGACACAGATGATGATGATCTTGTCACAGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp CGACCCCCAGTGTGCATCCTGTACCTCGACCTGTCTCAGCATCTGTaGCTGAGACACCGGCCTGTGACAAGATCATCATCATCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: RPPVCILYLDLSQHL*LRHRPVTRSSSSVS
Trigger: TGACACAGATGATGATGATCTTGTCACAGGCCGGTGTCTCAGGCACAGATGCTGAGACAGGTCGAGGTACAGGATGCACACTGGGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp CAGAAAGGGCCTCGAAAGGCCGCCGCTGCGCCCTGTGGAAAGGCTGCCGCTGCAGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: QKGPRKAAAAPCGKAAAADIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...TGCAGCGGCAGCCTTTCCACAGGGCGCAGCGGCGGCCTTTCGAGGCCCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp TCTGTGTCACTCCCCAAGCATGCTGCGCACTGGACACACAGGCCCTaGCTCAACTTGTCCTGTCTGACTTCAGTGGTCCTACAGGATCTA +
Preference number: 5 (lower is better)
Translates to: SVSLPKHAAHWTHRP*LNLSCLTSVVLQDL
Trigger: TAGATCCTGTAGGACCACTGAAGTCAGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCATGCTTGGGGAGTGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp GCCTGTGACAAGATCATCATCATCTGTGTCACTCCCCAAGCATGCTaGGCACTGGACACACAGGCCCTGACTCAACTTGTCCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: ACDKIIIICVTPQAC*ALDTQALTQLVLSD
Trigger: GTCAGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCATGCTTGGGGAGTGACACAGATGATGATGATCTTGTCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp TCTGAAACATGTACTTGTACAAGCCCGACAGCAGCGTGTACATCCTaGCCTGGGCACCCCAACATAGGTCAGTGTGCAGCCAGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SETCTCTSPTAACTS*PGHPNIGQCAARKH
Trigger: GTGCTTTCTGGCTGCACACTGACCTATGTTGGGGTGCCCAGGGCAGGATGTACACGCTGCTGTCGGGCTTGTACAAGTACATGTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS TCA 90 bp CCAGCATTGTCCAGGCCCAGGATCAGGATGCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAGCCCGACAGCAGCGTGTACATCCTG +
Preference number: 5 (lower is better)
Translates to: PALSRPRIRMQYSSF*NMYLYKPDSSVYIL
Trigger: CAGGATGTACACGCTGCTGTCGGGCTTGTACAAGTACATGTTTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCCTGGACAATGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp CCAGCATTGTCCAGGCCCAGGATCAGGATGCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAGCCCGACAGCAGCGTGTACATCCTC +
Preference number: 5 (lower is better)
Translates to: PALSRPRIRMQYSSF*NMYLYKPDSSVYIL
Trigger: GAGGATGTACACGCTGCTGTCGGGCTTGTACAAGTACATGTTTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCCTGGACAATGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618838.4
CDS CCA 90 bp ACAGGATCTATCAGAGATCACTTGGCCATGGGAGAAATGTCTTCTTaGCTAGAAGTCACAGCAGGAGGGGACACTTTGGGGGCGCCTAGG +
Preference number: 5 (lower is better)
Translates to: TGSIRDHLAMGEMSS*LEVTAGGDTLGAPR
Trigger: CCTAGGCGCCCCCAAAGTGTCCCCTCCTGCTGTGACTTCTAGCCAAGAAGACATTTCTCCCATGGCCAAGTGATCTCTGATAGATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp TGTTGGAGAACACTGCACCAGCAGATGGTCTCATTTTGGTTTCTGTaGGACCCACTTTGGCTGCAAAGAGCCACACTGCCAGGTCACACC +
Preference number: 5 (lower is better)
Translates to: CWRTLHQQMVSFWFL*DPLWLQRATLPGHT
Trigger: GGTGTGACCTGGCAGTGTGGCTCTTTGCAGCCAAAGTGGGTCCCACAGAAACCAAAATGAGACCATCTGCTGGTGCAGTGTTCTCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTGTCTCCACATCCTGCTaGTTGGCCAGCACCAAGACG +
Preference number: 5 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSVSTSC*LASTKT
Trigger: CGTCTTGGTGCTGGCCAACAAGCAGGATGTGGAGAC...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 90 bp ATGCTGCGCACTGGACACACAGGCCCTGACTCAACTTGTCCTGTCTaGCTTCAGTGGTCCTACAGGATCTATCAGAGATCACTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: MLRTGHTGPDSTCPV*LQWSYRIYQRSLGH
Trigger: ATGGCCAAGTGATCTCTGATAGATCCTGTAGGACCACTGAAGTCAGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAATTCTCAAACGCCTGCTaGGACTCAGCCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKFSNAC*DSASLS
Trigger: GGAGAGGCTGGCTGAGTCCAAGCAGGCGTTTGAGAA...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS-3UTR CAA 90 bp CCTCCAAAGCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPKPPDAYAFPDIEESLSSLKAV*MSGIER
Trigger: CCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGA...AGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGCTTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CCA 90 bp CTTGCTTCATGTTGGAGAACACTGCACCAGCAGATGGTCTCATTTTaGTTTCTGTGGGACCCACTTTGGCTGCAAAGAGCCACACTGCCA +
Preference number: 5 (lower is better)
Translates to: LASCWRTLHQQMVSF*FLWDPLWLQRATLP
Trigger: TGGCAGTGTGGCTCTTTGCAGCCAAAGTGGGTCCCACAGAAACCAAAATGAGACCATCTGCTGGTGCAGTGTTCTCCAACATGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS-3UTR CAA 90 bp AACAGCCACTCCCAGCAGGCCCCCTCAGCTTTTTGCATCAGTCAGCTCCCTCCCGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: NSHSQQAPSAFCISQLPPDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...GGGAGGGAGCTGACTGATGCAAAAAGCTGAGGGGGCCTGCTGGGAGTGGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 90 bp GGCATCTCTGGCCCCACTGTATTCTTGCTTCATGTTGGAGAACACTaGACCAGCAGATGGTCTCATTTTGGTTTCTGTGGGACCCACTTT +
Preference number: 5 (lower is better)
Translates to: GISGPTVFLLHVGEH*TSRWSHFGFCGTHF
Trigger: AAAGTGGGTCCCACAGAAACCAAAATGAGACCATCTGCTGGTGCAGTGTTCTCCAACATGAAGCAAGAATACAGTGGGGCCAGAGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 90 bp ACTGGGATCTCAGAAATGCCCAAAACCTGTGTCAAAATAGGAGACTaGCGCTGTGAGACCCTGAGGAGTCTTCTGGTGATCATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: TGISEMPKTCVKIGD*RCETLRSLLVIMEE
Trigger: TTCTTCCATGATCACCAGAAGACTCCTCAGGGTCTCACAGCGGCAGTCTCCTATTTTGACACAGGTTTTGGGCATTTCTGAGATCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 90 bp CTCAGAAATGCCCAAAACCTGTGTCAAAATAGGAGACTGCCGCTGTaGGACCCTGAGGAGTCTTCTGGTGATCATGGAAGAACAAATGTT +
Preference number: 5 (lower is better)
Translates to: LRNAQNLCQNRRLPL*DPEESSGDHGRTNV
Trigger: AACATTTGTTCTTCCATGATCACCAGAAGACTCCTCAGGGTCTCACAGCGGCAGTCTCCTATTTTGACACAGGTTTTGGGCATTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 90 bp CTGAGGAGAGAGGCAGAGGCGAAACACATCAAGGAGGGGCTATACTaGCTTCCAAATATCCTTACTCAGGTCTGTTCTTTAAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: LRREAEAKHIKEGLY*LPNILTQVCSLKDR
Trigger: TCTGTCTTTTAAAGAACAGACCTGAGTAAGGATATTTGGAAGCCAGTATAGCCCCTCCTTGATGTGTTTCGCCTCTGCCTCTCTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609537.5
CDS-3UTR CAA 90 bp GCCTCCGGATGCCTACGCTTTTCCAGACATAGAGGAAAGTTTGTCTTCGAGAAAGACATAGAGGAAAGTTaGTCTTCGAGAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: ASGCLRFSRHRGKFVFEKDIEES*SSRKQS
Trigger: ACTTTGTTTTCTCGAAGACAAACTTTCCTCTATGTC...TTTCTCGAAGACAAACTTTCCTCTATGTCTGGAAAAGCGTAGGCATCCGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000607873.1
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 72 bp GCGGCGCCTGACGGGACGCGGGCCGGCCTCAGGGAATaGGCTGAACCGCGTCCCAGCGGCCTCCGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: AAPDGTRAGLRE*AEPRPSGLRAP
Trigger: CGGAGCGCGGAGGCCGCTGGGACGCGGTTCAGCTCATTCCCTGAGGCCGGCCCGCGTCCCGTCAGGCGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607873.1
ENST00000614942.4
CDS GCA 72 bp CACGCTTCACGCGCGCGGAACGGGGAACACACTCGCTaGAGCCCCGCCTGGGCCACGGCACCCTCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: HASRARNGEHTR*SPAWATAPSSA
Trigger: GGCGCTCGAGGGTGCCGTGGCCCAGGCGGGGCTGCAGCGAGTGTGTTCCCCGTTCCGCGCGCGTGAAGCGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS TCA 72 bp GCAGGGCCGCAGTGGACGGGAGCGACACCTCAGGGCTaGGTGCGGGCAGGACCCAGAGCCCCACGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: AGPQWTGATPQG*VRAGPRAPRPS
Trigger: ACTGGGGCGTGGGGCTCTGGGTCCTGCCCGCACTCAGCCCTGAGGTGTCGCTCCCGTCCACTGCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp CCCTGCTCGCGGGACTACCCAGCCGGGTGTTCACAGTaGGCTCAGCCGCGCTCCCGCCCTCCCCCGAGGCTT +
Preference number: 6 (lower is better)
Translates to: PCSRDYPAGCSQ*AQPRSRPPPRL
Trigger: AAGCCTCGGGGGAGGGCGGGAGCGCGGCTGAGCTCACTGTGAACACCCGGCTGGGTAGTCCCGCGAGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS CCA 72 bp GACCCAGGGAGCCACTGGCCCCACCACGGTGGTGTCTaGAGAAGGGCTCAGACTGCCAGGAAGTCGCACCCC +
Preference number: 6 (lower is better)
Translates to: DPGSHWPHHGGV*RRAQTARKSHP
Trigger: GGGGTGCGACTTCCTGGCAGTCTGAGCCCTTCTCCAGACACCACCGTGGTGGGGCCAGTGGCTCCCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp ACAGAGGCCGCCAACCCCTCAAGGGACCCTGCAGTGTaGCGGCTGTCTGCTGCTGACACAAGGGAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: TEAANPSRDPAV*RLSAADTREQA
Trigger: CGCCTGCTCCCTTGTGTCAGCAGCAGACAGCCGGCACACTGCAGGGTCCCTTGAGGGGTTGGCGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp AGCTGGGGACCCAGGGAGCCACTGGCCCCACCACGGTaGTGTCTGGAGAAGGGCTCAGACTGCCAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: SWGPREPLAPPR*CLEKGSDCQEV
Trigger: GACTTCCTGGCAGTCTGAGCCCTTCTCCAGACACCACCGTGGTGGGGCCAGTGGCTCCCTGGGTCCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp GGGGGAAGAGGGAGGTGTCCAAGCGTGGCTCCTGGCTaGCCAGCTGACCCCAGTGGAGCAGTCAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: GGRGRCPSVAPG*PADPSGAVRGT
Trigger: AGTCCCTCTGACTGCTCCACTGGGGTCAGCTGGCCAGCCAGGAGCCACGCTTGGACACCTCCCTCTTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp TGGGCTGGTCAGTCCTGGGCTCGCTGGCAACACTCCTaGGCAAGACAGGGCACAGCCCCTGCAGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: WAGQSWARWQHS*ARQGTAPAASG
Trigger: ACCTGAGGCTGCAGGGGCTGTGCCCTGTCTTGCCCAGGAGTGTTGCCAGCGAGCCCAGGACTGACCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp ACCTCTGCAGCCTGGGCTGGTCAGTCCTGGGCTCGCTaGCAACACTCCTGGGCAAGACAGGGCACAGCCCCT +
Preference number: 6 (lower is better)
Translates to: TSAAWAGQSWAR*QHSWARQGTAP
Trigger: AGGGGCTGTGCCCTGTCTTGCCCAGGAGTGTTGCCAGCGAGCCCAGGACTGACCAGCCCAGGCTGCAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GGAGGGGCGGCTCTGTGGAGGCTGCAGCAAGCCCAGTaGGAGAATCTCCACGTGGCTCCTGGGGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: GGAALWRLQQAQ*ENLHVAPGASE
Trigger: CTCAGAAGCCCCAGGAGCCACGTGGAGATTCTCTCACTGGGCTTGCTGCAGCCTCCACAGAGCCGCCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp GAGGAACCTAGACCACAGCCTGGCCCGTTGAGGGAGTaGACCTGTGGGGCTCTGTGCCAGCACCTCGCACAG +
Preference number: 6 (lower is better)
Translates to: EEPRPQPGPLRE*TCGALCQHLAQ
Trigger: CTGTGCGAGGTGCTGGCACAGAGCCCCACAGGTGCACTCCCTCAACGGGCCAGGCTGTGGTCTAGGTTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp GACCCACCAGGCCATGGTGTGAAGTCCCGGCCAGCCTaGCCCCACATGGCACAGCATAGCCAGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DPPGHGVKSRPA*PHMAQHSQFSS
Trigger: GGAGGAGAACTGGCTATGCTGTGCCATGTGGGGCCAGGCTGGCCGGGACTTCACACCATGGCCTGGTGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp CTGCTGCTGACACAAGGGAGCAGGCGGACCCTAAGGTaGAGACCTCTGTGGCAGGAGGGGCGGCTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLLTQGSRRTLR*RPLWQEGRLCG
Trigger: TCCACAGAGCCGCCCCTCCTGCCACAGAGGTCTCCACCTTAGGGTCCGCCTGCTCCCTTGTGTCAGCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp CCAGCACCAAGACGGGGACACCGCACAGCGCCTCGCTaGTCACCACCTTCAAACGCCTGCTTGGACTCAGCC +
Preference number: 6 (lower is better)
Translates to: PAPRRGHRTAPR*SPPSNACLDSA
Trigger: GGCTGAGTCCAAGCAGGCGTTTGAAGGTGGTGACCAGCGAGGCGCTGTGCGGTGTCCCCGTCTTGGTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 90 bp GATAGGGTTTGGGGGCTGGAGGAACCTAGACCACAGCCTGGCCCGTaGAGGGAGTGCACCTGTGGGGCTCTGTGCCAGCACCTCGCACAG +
Preference number: 6 (lower is better)
Translates to: DRVWGLEEPRPQPGP*RECTCGALCQHLAQ
Trigger: CTGTGCGAGGTGCTGGCACAGAGCCCCACAGGTGCACTCCCTCAACGGGCCAGGCTGTGGTCTAGGTTCCTCCAGCCCCCAAACCCTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp CCCAGGGTCCAGCCCCAGGACGAGGCCAATTCGCAATaGCGCCCCTTTCTGTGGTGCTGGCTCTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: PRVQPQDEANSQ*RPFLWCWLCTR
Trigger: CCTTGTGCAGAGCCAGCACCACAGAAAGGGGCGTCATTGCGAATTGGCCTCGTCCTGGGGCTGGACCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GGGAGATCTGGTGGAGGTGTCCCCAGACGCTGCTCCTaGGAACCTGCCGGCAACCTTTGGCCTGATGGTGGC +
Preference number: 6 (lower is better)
Translates to: GRSGGGVPRRCS*EPAGNLWPDGG
Trigger: GCCACCATCAGGCCAAAGGTTGCCGGCAGGTTCTCAGGAGCAGCGTCTGGGGACACCTCCACCAGATCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp CCAGCACCAAGACGGGGACACCGCACAGCGCCTCGCTaGTCACCACCTTCTCAAACGCCTGCTTGGACTCAG +
Preference number: 6 (lower is better)
Translates to: PAPRRGHRTAPR*SPPSQTPAWTQ
Trigger: CTGAGTCCAAGCAGGCGTTTGAGAAGGTGGTGACCAGCGAGGCGCTGTGCGGTGTCCCCGTCTTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000607873.1
ENST00000609537.5
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 72 bp CCCAGGTCAGCCGCCACTGTGTCCTGCTCACAGCAATaGCTGCGACCTCTCCGCATACACATCGGTTCCGGC +
Preference number: 6 (lower is better)
Translates to: PRSAATVSCSQQ*LRPLRIHIGSG
Trigger: GCCGGAACCGATGTGTATGCGGAGAGGTCGCAGTCATTGCTGTGAGCAGGACACAGTGGCGGCTGACCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS GCA 72 bp TTCTGTGGGACCCACTTTGGCTGCAAAGAGCCACACTaGCAGGTCACACCTGCCCAGGGCAGCCCACACTGG +
Preference number: 6 (lower is better)
Translates to: FCGTHFGCKEPH*QVTPAQGSPHW
Trigger: CCAGTGTGGGCTGCCCTGGGCAGGTGTGACCTGGCAGTGTGGCTCTTTGCAGCCAAAGTGGGTCCCACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp GACGCCCCTTTCTGTGGTGCTGGCTCTGCACAAGGATaGAGGATACAGGAAACCAGGGTGGGAGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: DAPFCGAGSAQG*RIQETRVGAGA
Trigger: GGCCCCTGCTCCCACCCTGGTTTCCTGTATCCTGCATCCTTGTGCAGAGCCAGCACCACAGAAAGGGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp AGGACCTTGGAGGAACCCCTCTCCAACGTGGAAGTGTaGGTCCACATAGGGCTGCAGCTGTGGCCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: RTLEEPLSNVEV*VHIGLQLWPVQ
Trigger: CTGCACTGGCCACAGCTGCAGCCCTATGTGGACCCACACTTCCACGTTGGAGAGGGGTTCCTCCAAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp GGAAGGGCTGTGCAGCCCCAAGACCAGCAGCAAGGATaGGCTACAGTGGCCCCCTTAAGTCTCCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: GRAVQPQDQQQG*ATVAPLSLPLP
Trigger: TGGAAGAGGGAGACTTAAGGGGGCCACTGTAGCCCATCCTTGCTGCTGGTCTTGGGGCTGCACAGCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp GAGCAGGCCTGGGTCAGGCAATCTCGCCTGCCGATCTaGCTGGTGCAGTCGCTGAAGGCCGTCTTGATGTCA +
Preference number: 6 (lower is better)
Translates to: EQAWVRQSRLPI*LVQSLKAVLMS
Trigger: TGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTGCCTGACCCAGGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000607873.1
ENST00000610414.4
ENST00000610774.1
ENST00000612157.4
ENST00000612256.4
ENST00000612772.1
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CAA 72 bp CTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LPILLVQSLKAV*MSGIERHVWGR
Trigger: CCTCCCCCAGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610414.4
CDS TCA 72 bp ACGCTGCTCCTGAGAACCTGCCGGCAACCTTTGGCCTaGTGGTGGCCAAAGGTGAAAGACAGGGATTGGGCC +
Preference number: 6 (lower is better)
Translates to: TLLLRTCRQPLA*WWPKVKDRDWA
Trigger: GGCCCAATCCCTGTCTTTCACCTTTGGCCACCATCAGGCCAAAGGTTGCCGGCAGGTTCTCAGGAGCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GGATTGAGAGGCACGTCAGATGTCCCTCTTGTCGGCTaGGATTGTAGGGGAGGCCAGCCTTACAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GLRGTSDVPLVG*DCRGGQPYRLG
Trigger: CCCCAGCCTGTAAGGCTGGCCTCCCCTACAATCTCAGCCGACAAGAGGGACATCTGACGTGCCTCTCAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS GCA 72 bp CTCCGCGTCCACGTGGAGCAGACAACAGCTCACATTTaGCACTTTGCCTCCAGGCTGTGCCAGCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: LRVHVEQTTAHI*HFASRLCQLSC
Trigger: ACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGTCTGCTCCACGTGGACGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp GCAGCAAGGTCTCTGAGCCGAAAGGAGGCACTCACTTaGGAGGAGTGCAGGGTCCCCAGGTCCCCACACTTT +
Preference number: 6 (lower is better)
Translates to: AARSLSRKEALT*EECRVPRSPHF
Trigger: AAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAAAGTGAGTGCCTCCTTTCGGCTCAGAGACCTTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS CAA 90 bp TGGTGGTCAGCAGCAAGGTCTCTGAGCCGAAAGGAGGCACTCACTTaGGAGGAGTGCAGGGTCCCCAGGTCCCCACACTTTGTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: WWSAARSLSRKEALT*EECRVPRSPHFVLS
Trigger: GGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAAAGTGAGTGCCTCCTTTCGGCTCAGAGACCTTGCTGCTGACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS CAA 90 bp AGGAGTGCAGGGTCCCCAGGTCCCCACACTTTGTCTTGTCCTGACTaGTCCCACAAAGACTGCAGCTCTTCCTGCCCTCCTAAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RSAGSPGPHTLSCPD*SHKDCSSSCPPKSQ
Trigger: CTGGGACTTAGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAAGTCAGGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424545.2
CDS CAA 90 bp TCATCAGGGGAGAGGCAGCCATCCTGCCGTCCCCACATCTGGTCTTaGCCATTTCTGTGTCCTGTGGTGGTCAGCAGCAAGGTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSGERQPSCRPHIWS*PFLCPVVVSSKVSE
Trigger: CTCAGAGACCTTGCTGCTGACCACCACAGGACACAGAAATGGCAAAGACCAGATGTGGGGACGGCAGGATGGCTGCCTCTCCCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS CAA 90 bp CAATCTCGCCTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCAAACGCCTGCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: QSRLPILLVQSLKAV*MSGIERHVKRLLGL
Trigger: GAGTCCAAGCAGGCGTTTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS CAA 90 bp CAATCTCGCCTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCAGATGTCCCTCTTGTCGG +
Preference number: 6 (lower is better)
Translates to: QSRLPILLVQSLKAV*MSGIERHVRCPSCR
Trigger: CCGACAAGAGGGACATCTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS TCA 72 bp GGTGCAGTCGCTGAAGGCCGTCTTGATGTCAGGGATTaGGAGGCACGTCTCCACATCCTGCTTGTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: GAVAEGRLDVRD*EARLHILLVGQ
Trigger: CTGGCCAACAAGCAGGATGTGGAGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000607873.1
ENST00000610774.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 72 bp CCGGCCACTAGAGCAGCACATACTCAGCAGACACGCTaGATGACGAGCCACAGCTGCCTCATGGGCATGACT +
Preference number: 6 (lower is better)
Translates to: PATRAAHTQQTR*MTSHSCLMGMT
Trigger: AGTCATGCCCATGAGGCAGCTGTGGCTCGTCATTCAGCGTGTCTGCTGAGTATGTGCTGCTCTAGTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GGTGCAGTCGCTGAAGGCCGTCTTGATGTCAGGGATTaGGAGGCACGTCAAACGCCTGCTTGGACTCAGCCA +
Preference number: 6 (lower is better)
Translates to: GAVAEGRLDVRD*EARQTPAWTQP
Trigger: TGGCTGAGTCCAAGCAGGCGTTTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS TCA 72 bp GGTGCAGTCGCTGAAGGCCGTCTTGATGTCAGGGATTaGGAGGCACGTCAGATGTCCCTCTTGTCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: GAVAEGRLDVRD*EARQMSLLSAE
Trigger: CTCAGCCGACAAGAGGGACATCTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS GCA 72 bp TCTCTGAGCCGAAAGGAGGCACTCACTTTGGAGGAGTaGAGGGTCCCCAGGTCCCCACACTTTGTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SLSRKEALTLEE*RVPRSPHFVLS
Trigger: GGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAAAGTGAGTGCCTCCTTTCGGCTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS GCA 72 bp TGTACTTGTACAAGCCCGACAGCAGCGTGTACATCCTaGCCTGGGCACCCCAACATAGGTCAGTGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: CTCTSPTAACTS*PGHPNIGQCAA
Trigger: GGCTGCACACTGACCTATGTTGGGGTGCCCAGGGCAGGATGTACACGCTGCTGTCGGGCTTGTACAAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612256.4
CDS GCA 72 bp GATTCACCTGGCCCTCTGGACGCCGGGCTGCTTCTGTaGAAAGCCACTCCAAGAGAACAGCTAGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: DSPGPLDAGLLL*KATPREQLELS
Trigger: GCTGAGTTCTAGCTGTTCTCTTGGAGTGGCTTTGCACAGAAGCAGCCCGGCGTCCAGAGGGCCAGGTGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS CAA 72 bp GGGTCCCCAGGTCCCCACACTTTGTCTTGTCCTGACTaGTCCCACAAAGACTGCAGCTCTTCCTGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: GSPGPHTLSCPD*SHKDCSSSCPP
Trigger: AGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAAGTCAGGACAAGACAAAGTGTGGGGACCTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424545.2
CDS CAA 72 bp CTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCTCCACATCC +
Preference number: 6 (lower is better)
Translates to: LPILLVQSLKAV*MSGIERHVSTS
Trigger: GGATGTGGAGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000607873.1
ENST00000610774.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CAA 72 bp CAGACTGCCCTGACCTCTCTGACTTGGCCAGCGAGGTaGCCCTTAGGCTCAAACCCAAGCCAGGGTTTGAAC +
Preference number: 6 (lower is better)
Translates to: QTALTSLTWPAR*PLGSNPSQGLN
Trigger: GTTCAAACCCTGGCTTGGGTTTGAGCCTAAGGGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp TCCACGTGGAGCAGACAACAGCTCACATTTGCCACTTaGCCTCCAGGCTGTGCCAGCTCTCCTGTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: STWSRQQLTFAT*PPGCASSPVQA
Trigger: TGCCTGGACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGTCTGCTCCACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp CTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCAAACGCCTG +
Preference number: 6 (lower is better)
Translates to: LPILLVQSLKAV*MSGIERHVKRL
Trigger: CAGGCGTTTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614942.4
ENST00000618568.4
CDS CAA 72 bp CTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCAGATGTCCC +
Preference number: 6 (lower is better)
Translates to: LPILLVQSLKAV*MSGIERHVRCP
Trigger: GGGACATCTGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612772.1
CDS CAA 90 bp AGGCACTCACTTTGGAGGAGTGCAGGGTCCCCAGGTCCCCACACTTaGTCTTGTCCTGACTTGTCCCACAAAGACTGCAGCTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RHSLWRSAGSPGPHT*SCPDLSHKDCSSSC
Trigger: GCAGGAAGAGCTGCAGTCTTTGTGGGACAAGTCAGGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAAAGTGAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424545.2
CDS CAA 90 bp CAATCTCGCCTGCCGATCTTGCTGGTGCAGTCGCTGAAGGCCGTCTaGATGTCAGGGATTGAGAGGCACGTCTCCACATCCTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: QSRLPILLVQSLKAV*MSGIERHVSTSCLL
Trigger: CAACAAGCAGGATGTGGAGACGTGCCTCTCAATCCCTGACATCAAGACGGCCTTCAGCGACTGCACCAGCAAGATCGGCAGGCGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000607873.1
ENST00000610774.1
ENST00000612157.4
ENST00000612256.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CAA 90 bp AAGTCTCCCTCTTCCAGTTTCGCCTTAAGAGAGGCCCTCAGGACCTaGGAGGAACCCCTCTCCAACGTGGAAGTGTGGGTCCACATAGGG +
Preference number: 6 (lower is better)
Translates to: KSPSSSFALREALRT*EEPLSNVEVWVHIG
Trigger: CCCTATGTGGACCCACACTTCCACGTTGGAGAGGGGTTCCTCCAAGGTCCTGAGGGCCTCTCTTAAGGCGAAACTGGAAGAGGGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp CTCCCCAAGCATGCTGCGCACTGGACACACAGGCCCTaGCTCAACTTGTCCTGTCTGACTTCAGTGGTCCTA +
Preference number: 6 (lower is better)
Translates to: LPKHAAHWTHRP*LNLSCLTSVVL
Trigger: TAGGACCACTGAAGTCAGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCATGCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp ACAACAGCTCACATTTGCCACTTTGCCTCCAGGCTGTaGCAGCTCTCCTGTCCAGGCATGAGTGCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: TTAHICHFASRL*QLSCPGMSAQR
Trigger: TCTCTGGGCACTCATGCCTGGACAGGAGAGCTGGCACAGCCTGGAGGCAAAGTGGCAAATGTGAGCTGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp CTTTGGAGGAGTGCAGGGTCCCCAGGTCCCCACACTTaGTCTTGTCCTGACTTGTCCCACAAAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: LWRSAGSPGPHT*SCPDLSHKDCS
Trigger: GCTGCAGTCTTTGTGGGACAAGTCAGGACAAGACAAAGTGTGGGGACCTGGGGACCCTGCACTCCTCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424545.2
CDS CAA 72 bp GTTTTCGACTGCTCCAGGAAGGTCGTCTTCCCAGCATaGTCCAGGCCCAGGATCAGGATGCAGTACTCGTCC +
Preference number: 6 (lower is better)
Translates to: VFDCSRKVVFPA*SRPRIRMQYSS
Trigger: GGACGAGTACTGCATCCTGATCCTGGGCCTGGACAATGCTGGGAAGACGACCTTCCTGGAGCAGTCGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CCA 72 bp CTGAGAAAGAAACAGACTGCCCTGACCTCTCTGACTTaGCCAGCGAGGTTGCCCTTAGGCTCAAACCCAAGC +
Preference number: 6 (lower is better)
Translates to: LRKKQTALTSLT*PARLPLGSNPS
Trigger: GCTTGGGTTTGAGCCTAAGGGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp ATTTCTGTGTCCTGTGGTGGTCAGCAGCAAGGTCTCTaGGCCGAAAGGAGGCACTCACTTTGGAGGAGTGCA +
Preference number: 6 (lower is better)
Translates to: ISVSCGGQQQGL*AERRHSLWRSA
Trigger: TGCACTCCTCCAAAGTGAGTGCCTCCTTTCGGCTCAGAGACCTTGCTGCTGACCACCACAGGACACAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424545.2
ENST00000610774.1
CDS TCA 72 bp AATGGGAGCTCCCCAACTGCAAAGTGCCAGCCAGCCTaGGAGACTAGTGTTACAGCAAAGAACCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: NGSSPTAKCQPA*ETSVTAKNPGA
Trigger: AGCTCCTGGGTTCTTTGCTGTAACACTAGTCTCTCAGGCTGGCTGGCACTTTGCAGTTGGGGAGCTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GTGGTCAGTGTGTTAAGACACACACACCCGAGAGCATaGGAAGCCAGGAGGCACAGCCCAACTCTCCGAAAT +
Preference number: 6 (lower is better)
Translates to: VVSVLRHTHPRA*EARRHSPTLRN
Trigger: ATTTCGGAGAGTTGGGCTGTGCCTCCTGGCTTCTCATGCTCTCGGGTGTGTGTGTCTTAACACACTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp TCCAGGCCCAGGATCAGGATGCAGTACTCGTCCTTCTaGAACATGTACTTGTACAAGCCCGACAGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SRPRIRMQYSSF*NMYLYKPDSSV
Trigger: CACGCTGCTGTCGGGCTTGTACAAGTACATGTTTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS GCA 72 bp GTGTGCATCCTGTACCTCGACCTGTCTCAGCATCTGTaGCTGAGACACCGGCCTGTGACAAGATCATCATCA +
Preference number: 6 (lower is better)
Translates to: VCILYLDLSQHL*LRHRPVTRSSS
Trigger: TGATGATGATCTTGTCACAGGCCGGTGTCTCAGGCACAGATGCTGAGACAGGTCGAGGTACAGGATGCACAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 72 bp ACTGAGAAAGAAACAGACTGCCCTGACCTCTCTGACTaGGCCAGCGAGGTTGCCCTTAGGCTCAAACCCAAG +
Preference number: 6 (lower is better)
Translates to: TEKETDCPDLSD*ASEVALRLKPK
Trigger: CTTGGGTTTGAGCCTAAGGGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CAA 90 bp AGAAAGAAACAGACTGCCCTGACCTCTCTGACTTGGCCAGCGAGGTaGCCCTTAGGCTCAAACCCAAGCCAGGGTTTGAACATTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RKKQTALTSLTWPAR*PLGSNPSQGLNIPR
Trigger: TCTGGGAATGTTCAAACCCTGGCTTGGGTTTGAGCCTAAGGGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp ACACTTTGTCTTGTCCTGACTGAGAAAGAAACAGACTaGCCTGACCTCTCTGACTTGGCCAGCGAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: TLCLVLTEKETD*PDLSDLASEVA
Trigger: GGCAACCTCGCTGGCCAAGTCAGAGAGGTCAGGGCAGTCTGTTTCTTTCTCAGTCAGGACAAGACAAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp AAGATCATCATCATCTGTGTCACTCCCCAAGCATGCTaGGCACTGGACACACAGGCCCTGACTCAACTTGTC +
Preference number: 6 (lower is better)
Translates to: KIIIICVTPQAC*ALDTQALTQLV
Trigger: GACAAGTTGAGTCAGGGCCTGTGTGTCCAGTGCGCAGCATGCTTGGGGAGTGACACAGATGATGATGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp GCCCAAAACCTGTGTCAAAATAGGAGACTGCCGCTGTaGGACCCTGAGGAGTCTTCTGGTGATCATGGAAGA +
Preference number: 6 (lower is better)
Translates to: AQNLCQNRRLPL*DPEESSGDHGR
Trigger: TCTTCCATGATCACCAGAAGACTCCTCAGGGTCTCACAGCGGCAGTCTCCTATTTTGACACAGGTTTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS TCA 72 bp CATCCACAGTGCCGATGTTTAGGCCCACGGTGGTGGTaGTTTTGGATAGACTCATCCCCTTGTAGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: HPQCRCLGPRWW*FWIDSSPCSSC
Trigger: ACAAGAACTACAAGGGGATGAGTCTATCCAAAATCACCACCACCGTGGGCCTAAACATCGGCACTGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000424545.2
ENST00000607873.1
ENST00000609537.5
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS TCA 72 bp ACTGGACACACAGGCCCTGACTCAACTTGTCCTGTCTaGCTTCAGTGGTCCTACAGGATCTATCAGAGATCA +
Preference number: 6 (lower is better)
Translates to: TGHTGPDSTCPV*LQWSYRIYQRS
Trigger: TGATCTCTGATAGATCCTGTAGGACCACTGAAGTCAGACAGGACAAGTTGAGTCAGGGCCTGTGTGTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp TCAGAAATGCCCAAAACCTGTGTCAAAATAGGAGACTaGCGCTGTGAGACCCTGAGGAGTCTTCTGGTGATC +
Preference number: 6 (lower is better)
Translates to: SEMPKTCVKIGD*RCETLRSLLVI
Trigger: GATCACCAGAAGACTCCTCAGGGTCTCACAGCGGCAGTCTCCTATTTTGACACAGGTTTTGGGCATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS GCA 72 bp TCGTCTTCCCAGCATTGTCCAGGCCCAGGATCAGGATaGAGTACTCGTCCTTCTGAAACATGTACTTGTACA +
Preference number: 6 (lower is better)
Translates to: SSSQHCPGPGSG*STRPSETCTCT
Trigger: TGTACAAGTACATGTTTCAGAAGGACGAGTACTGCATCCTGATCCTGGGCCTGGACAATGCTGGGAAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612157.4
ENST00000612256.4
ENST00000614942.4
ENST00000618568.4
ENST00000618838.4
ENST00000619493.4
ENST00000622789.5
CDS CAA 90 bp GTCCTGTCTGACTTCAGTGGTCCTACAGGATCTATCAGAGATCACTaGGCCATGGGAGAAATGTCTTCTTGGCTAGAAGTCACAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VLSDFSGPTGSIRDH*AMGEMSSWLEVTAG
Trigger: TCCTGCTGTGACTTCTAGCCAAGAAGACATTTCTCCCATGGCCAAGTGATCTCTGATAGATCCTGTAGGACCACTGAAGTCAGACAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610774.1
CDS CCA 72 bp GAGGCAGAGGCGAAACACATCAAGGAGGGGCTATACTaGCTTCCAAATATCCTTACTCAGGTCTGTTCTTTA +
Preference number: 6 (lower is better)
Translates to: EAEAKHIKEGLY*LPNILTQVCSL
Trigger: TAAAGAACAGACCTGAGTAAGGATATTTGGAAGCCAGTATAGCCCCTCCTTGATGTGTTTCGCCTCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609537.5