RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132254

Ensembl transcript IDs: ENST00000254584.6, ENST00000396777.8, ENST00000423813.6, ENST00000445086.6, ENST00000525235.1, ENST00000525329.1, ENST00000529847.1, ENST00000530410.1, ENST00000531037.5, ENST00000614314.4

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCGCAGCTTCTCATACTTGTCCCGATGGGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCACGTGTCCCTGCATCCCGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: PRSFSYLSRWAWKVA*ALSSRPRVPASRGP
Trigger: AGGCCCCCGGGATGCAGGGACACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR CCA 90 bp CATCTCCCCGCAGCTTCTCATACTTGTCCCGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTCGACCACGTGTCCCTGCATCCCGGG +
Preference number: 1 (lower is better)
Translates to: HLPAASHTCPDGPGK*PGHSQVDHVSLHPG
Trigger: CCCGGGATGCAGGGACACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR CCA 90 bp ATGGCCACATCTCCCCGCAGCTTCTCATACTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGTGTCCCTGCA +
Preference number: 1 (lower is better)
Translates to: MATSPRSFSYLSRWA*KVAWALSSRPRVPA
Trigger: TGCAGGGACACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGATGTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR TCA 90 bp GCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCC +
Preference number: 1 (lower is better)
Translates to: ATSLAQGSPRRAAIG*QGIFRLCHWSGSTP
Trigger: GGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CCA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTaGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCAC +
Preference number: 1 (lower is better)
Translates to: RRNIIGPGESEKSCH*LTGHFQALSLVREH
Trigger: GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR TCA 90 bp TTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGT +
Preference number: 1 (lower is better)
Translates to: FRLCHWSGSTPQPEE*CHWPGSGFVIAVGC
Trigger: ACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR GCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTaGCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGG +
Preference number: 1 (lower is better)
Translates to: GIRRNIIGPGESEKS*HWLTGHFQALSLVR
Trigger: CCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CCA 90 bp TCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATaGGAATCTGCTGAGTGGGTCTTCCCCTTCCTCCAGCCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: SMTKGKVMPVRIPAL*ESAEWVFPFLQPSR
Trigger: TCTGGAAGGCTGGAGGAAGGGGAAGACCCACTCAGCAGATTCCCATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp GTGATGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: VMPLAREWFCHSRWL*SGRKRSGNEALWPG
Trigger: TCCTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR TCA 90 bp GAGCTTGTCTCCACCCAGGCCACCCTCCTAGAGTCCCCGACAAATTaGCCTCGCTGGGCCTGCTTTTATGAAAGGTTTATTCCTAGTGCT +
Preference number: 1 (lower is better)
Translates to: ELVSTQATLLESPTN*PRWACFYERFIPSA
Trigger: AGCACTAGGAATAAACCTTTCATAAAAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTCTAGGAGGGTGGCCTGGGTGGAGACAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR GCA 90 bp CCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATaGTCCAGTGCTTGTGAAGGAAACCCAGACGGGGATCATGCTTGC +
Preference number: 1 (lower is better)
Translates to: PPQPLIHLSSAHSTR*SSACEGNPDGDHAC
Trigger: GCAAGCATGATCCCCGTCTGGGTTTCCTTCACAAGCACTGGAGCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 90 bp GGATCTTGCTCCCCAGACGTTAGCCCTCATCACTCAGCTAGAAAGTaGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAG +
Preference number: 1 (lower is better)
Translates to: GSCSPDVSPHHSARK*QNLELSPVFRPYNQ
Trigger: CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTGATGAGGGCTAACGTCTGGGGAGCAAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTaGGTGAGGGTAGGCCTATTCAGATGCAAGGCCAGCAATGGGGCT +
Preference number: 1 (lower is better)
Translates to: RSQSSWALSTIKLGG*VRVGLFRCKASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTACCCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
3UTR CCA 90 bp CTAAAGGACAAAGCTTTGGCTCCAACTGAGGCTGGGAGAGAAGACTaGGCCTTCAAACCATCTCTGAAACCTGTGACTTCAGCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: LKDKALAPTEAGRED*AFKPSLKPVTSAAW
Trigger: CCAGGCAGCTGAAGTCACAGGTTTCAGAGATGGTTTGAAGGCCCAGTCTTCTCTCCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR CCA 90 bp ACAAGGTTCAGATTTAGGCTCAACACCTGGGTGCAGCAGGAGCTTTaGGAACCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGC +
Preference number: 1 (lower is better)
Translates to: TRFRFRLNTWVQQEL*EPPQPLIHLSSAHS
Trigger: GCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGGTTCCCAAAGCTCCTGCTGCACCCAGGTGTTGAGCCTAAATCTGAACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 90 bp CTTTCTTGTGACCTCTCCACAAGGTTCAGATTTAGGCTCAACACCTaGGTGCAGCAGGAGCTTTGGGAACCGCCTCAACCTCTTATCCAC +
Preference number: 1 (lower is better)
Translates to: LSCDLSTRFRFRLNT*VQQELWEPPQPLIH
Trigger: GTGGATAAGAGGTTGAGGCGGTTCCCAAAGCTCCTGCTGCACCCAGGTGTTGAGCCTAAATCTGAACCTTGTGGAGAGGTCACAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp CCTTCCCTGCCCCAAAAATCAAGCTCTAGTCAGATGATTGCAGGCTaGTCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGTATCCATGAC +
Preference number: 1 (lower is better)
Translates to: PSLPQKSSSSQMIAG*SKPRRLSGSCSIHD
Trigger: GTCATGGATACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGATCAGCCTGCAATCATCTGACTAGAGCTTGATTTTTGGGGCAGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp ACGTTAGCCCTCATCACTCAGCTAGAAAGTGGCAGAACCTGGAGTTaGGCCCTGTTTTTAGGCCCTACAACCAGCATTTGGAGACTCGGT +
Preference number: 1 (lower is better)
Translates to: TLALITQLESGRTWS*ALFLGPTTSIWRLG
Trigger: ACCGAGTCTCCAAATGCTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTGATGAGGGCTAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp TATAAGGACCACCTTCCCTGCCCCAAAAATCAAGCTCTAGTCAGATaGTTGCAGGCTGATCAAAGCCCAGAAGACTGTCTGGGAGCTGCA +
Preference number: 1 (lower is better)
Translates to: YKDHLPCPKNQALVR*LQADQSPEDCLGAA
Trigger: TGCAGCTCCCAGACAGTCTTCTGGGCTTTGATCAGCCTGCAATCATCTGACTAGAGCTTGATTTTTGGGGCAGGGAAGGTGGTCCTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp TTTAGGCCCTACAACCAGCATTTGGAGACTCGGTACCTTTCATGTTaGAAAATCCCCAGTGGCCCATTAAGTGGCAGCTCATATAAGGAC +
Preference number: 1 (lower is better)
Translates to: FRPYNQHLETRYLSC*KIPSGPLSGSSYKD
Trigger: GTCCTTATATGAGCTGCCACTTAATGGGCCACTGGGGATTTTTCAACATGAAAGGTACCGAGTCTCCAAATGCTGGTTGTAGGGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 90 bp GCTGGGGCTACTATGCTACCCAAGATGAGGGAACTGGAGTCTAGATaGCACTATCTTAAGCCTCAGAGGACTACTTTTCTCAACTCTATA +
Preference number: 1 (lower is better)
Translates to: AGATMLPKMRELESR*HYLKPQRTTFLNSI
Trigger: TATAGAGTTGAGAAAAGTAGTCCTCTGAGGCTTAAGATAGTGTCATCTAGACTCCAGTTCCCTCATCTTGGGTAGCATAGTAGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 90 bp TGCTTTTATGAAAGGTTTATTCCTAGTGCTAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGGTAGGC +
Preference number: 1 (lower is better)
Translates to: CFYERFIPSARSQSS*ALSTIKLGGWVRVG
Trigger: GCCTACCCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCTAGCACTAGGAATAAACCTTTCATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
3UTR-3UTR CCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCACAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 2 (lower is better)
Translates to: QHHWPRGVREELPLADRAQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CAA 90 bp TGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGGGAGCAGCTCACTGCTCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: CPISHTLGLPFPMSF*IAKLGWEQLTAPLA
Trigger: GGCTAGAGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR TCA 90 bp GAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: ELPLADRAFSGSVIGQGAPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...TGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR TCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTGAGTCCCCGACAAATTaGCCTCGCTGGGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPESPTN*PRWACF
Trigger: AAAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTC...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR GCA 90 bp TTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: LADRAFSGSVIGQGAHPSPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...GCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp TTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 2 (lower is better)
Translates to: LADRAFSGSVIGQGAHPSDGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...GCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR CAA 90 bp AGGAACTTGAGCTTGATGGCCACATCTCCCCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAAGTGGCCTGGGCACTCTCAAGTCGA +
Preference number: 2 (lower is better)
Translates to: RNLSLMATSPRSFSY*SRWAWKVAWALSSR
Trigger: TCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR TCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR GCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 2 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCACCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 2 (lower is better)
Translates to: QHHWPRGVREELPLADRAPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 2 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR TCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 2 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR TCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: SPSLQWARIEERQRVLDAEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR TCA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATAGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR TCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGACAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 2 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp CATCCCGGGGGCCTAGACTCAGCTCCTCTAAGTCTGTTCGGTAGGCATCATATTCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 2 (lower is better)
Translates to: HPGGLDSAPLSLFGRHHIQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...AATATGATGCCTACCGAACAGACTTAGAGGAGCTGAGTCTAGGCCCCCGGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR CCA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 2 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR CAA 90 bp CCAGTGCTTGTGAAGGAAACCCAGACGGGGATCATGCTTGCAGTTTaGGGCTGGGGCTACTATGCTACCCAAGATGAGGGAACTGGAGTC +
Preference number: 2 (lower is better)
Translates to: PVLVKETQTGIMLAV*GWGYYATQDEGTGV
Trigger: GACTCCAGTTCCCTCATCTTGGGTAGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGGTTTCCTTCACAAGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR TCA 90 bp AACCCAACCCCCTCTGGATCTGGTGCTCTTAAGATCCATAGCTATCTTGGTGCTGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: NPTPSGSGALKIHSYLGAEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...AGCACCAAGATAGCTATGGATCTTAAGAGCACCAGATCCAGAGGGGGTTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR TCA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: QWARIEERQRVLDATSLAEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGGTAGGCCTATTCAGATaGAAGGCCAGCAATGGGGCT +
Preference number: 2 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWVGLFR*KASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTAC...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp TCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGTATCCATGACAAAGGGCAAAGTCCAGTCCATGCCAGATaGCCCTCCTTTGTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SKPRRLSGSCSIHDKGQSPVHAR*PSFVLP
Trigger: TGGGAGCACAAAGGAGGGGCATCTGGCATGGACTGG...ACTTTGCCCTTTGTCATGGATACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CCA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 2 (lower is better)
Translates to: QWARIEERQRVLDATSLAQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CAA 90 bp GACGTTAGCCCTCATCACTCAGCTAGAAAGTGGCAGAACCTGGAGTaGAGCCCTGTTTTTAGGCCCTACAACCAGCATTTGGAGACTCGG +
Preference number: 2 (lower is better)
Translates to: DVSPHHSARKWQNLE*SPVFRPYNQHLETR
Trigger: CCGAGTCTCCAAATGCTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTGATGAGGGCTAACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR TCA 90 bp GCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTGATAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 2 (lower is better)
Translates to: AFSGSVIGQGAHPSLKSDKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...ATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR TCA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 2 (lower is better)
Translates to: SCHWLTGHFQALSLVREHHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR TCA 90 bp AACCCAACCCCCTCTGGATCTGGTGCTCTTAAGATCCATAGCTATCTTGGTGCTAGCTTTGGCTCCAACTaGGGCTGGGAGAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: NPTPSGSGALKIHSYLGASFGSN*GWERRL
Trigger: CAGTCTTCTCTCCCAGCCTCAGTTGGAGCCAAAGCT...AGCACCAAGATAGCTATGGATCTTAAGAGCACCAGATCCAGAGGGGGTTGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CCA 90 bp GATGAAGGTCAGCAAACCCAACCCCCTCTGGATCTGGTGCTCTTAAGATCCATATTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: DEGQQTQPPLDLVLLRSIFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...TATGGATCTTAAGAGCACCAGATCCAGAGGGGGTTGGGTTTGCTGACCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR TCA 90 bp GCGCCCTCTGTACTTCTGTATCCTAATACTTATCACTGTTTTGTAGTTGCCTGGCCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: APSVLLYPNTYHCFVVAWPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...CCAGGCAACTACAAAACAGTGATAAGTATTAGGATACAGAAGTACAGAGGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CCA 90 bp CCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACTTATTCCCCTTCTCTGCAATaGGCACGCATAGAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: PLLCAPTAPSVLLYPNTYSPSLQ*ARIEER
Trigger: TCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA...ATAAGTATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR CAA 90 bp TGCTTGTGCATCACCTTGATCTTGTTTTCTTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGCAGCTTCTCATACTTGTCCCGATGG +
Preference number: 2 (lower is better)
Translates to: CLCITLILFSSRNLS*MATSPRSFSYLSRW
Trigger: CCATCGGGACAAGTATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR TCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCACATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 2 (lower is better)
Translates to: SPSLQWARIEERQRVLDAHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTTGTTTTGTAGTTGCCTaGTTACTTCTTTCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPCFVVA*LLLSLS
Trigger: ACTGAGGGAAAGAAGTAACCAGGCAACTACAAAACA...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CCA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 2 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR TCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 2 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR GCA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATATCACTGTTTTGTAGTTaGCTGGTTACTTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: RCPSFVLPQRPLYFCILISLFCS*LVTSFP
Trigger: AGGGAAAGAAGTAACCAGGCAACTACAAAACAGTGA...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CCA 90 bp GATGAAGGTCAGCAAACCCAACCCCCTCTGGATCTGGTGCTCTTAAGATCCATAGACTTGATAGGGTTCTaGTGTTTGATTAGACTGAGC +
Preference number: 2 (lower is better)
Translates to: DEGQQTQPPLDLVLLRSIDLIGF*CLIRLS
Trigger: GCTCAGTCTAATCAAACACCAGAACCCTATCAAGTC...TATGGATCTTAAGAGCACCAGATCCAGAGGGGGTTGGGTTTGCTGACCTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CCA 90 bp AGAGGACTACTTTTCTCAACTCTATACTTCTCCCATGCAGTCAAATTTCTGCTTGTGAGCCACCGCACCTaGCCAGGTCTCAGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: RGLLFSTLYFSHAVKFLLVSHRT*PGLSFQ
Trigger: TTGAAAGCTGAGACCTGGCCAGGTGCGGTGGCTCAC...AAGCAGAAATTTGACTGCATGGGAGAAGTATAGAGTTGAGAAAAGTAGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR GCA 90 bp GCTAGAAAGTGGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAGTGCTGTATGAATGAATaGATGATGAAGGTCAGCAAA +
Preference number: 2 (lower is better)
Translates to: ARKWQNLELSPVFRPYNQCCMNE*MMKVSK
Trigger: TTTGCTGACCTTCATCATGCATTCATTCATACAGCA...CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CCA 90 bp TGCAGTATCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATGTGTTTTGTAGTTGCCTaGTTACTTCTTTCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: CSIHDKGQSHACEDPCTMCFVVA*LLLSLS
Trigger: ACTGAGGGAAAGAAGTAACCAGGCAACTACAAAACA...CATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGATACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CCA 90 bp TCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGTATCCATGACAAAGGGCAAAGTAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAA +
Preference number: 2 (lower is better)
Translates to: SKPRRLSGSCSIHDKGQSRSQSS*ALSTIK
Trigger: TTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT...ACTTTGCCCTTTGTCATGGATACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 72 bp TCTCCCCGCAGCTTCTCATACTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGT +
Preference number: 3 (lower is better)
Translates to: SPRSFSYLSRWA*KVAWALSSRPR
Trigger: ACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR TCA 72 bp GAGCCACCGCACCTGGCCAGGTCTCAGCTTTCAAACTaGCATCCCCATTTCCACCCCAGTCCATGCCAGATG +
Preference number: 3 (lower is better)
Translates to: EPPHLARSQLSN*HPHFHPSPCQM
Trigger: CATCTGGCATGGACTGGGGTGGAAATGGGGATGTCAGTTTGAAAGCTGAGACCTGGCCAGGTGCGGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR TCA 72 bp CATGCCTGTGAGGATCCCTGCACTATGGGAATCTGCTaGGTGGGTCTTCCCCTTCCTCCAGCCTTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: HACEDPCTMGIC*VGLPLPPAFQR
Trigger: CCTCTGGAAGGCTGGAGGAAGGGGAAGACCCACTCAGCAGATTCCCATAGTGCAGGGATCCTCACAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACACGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: RRNIIGPGESEKSCHWLTRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...TGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR GCA 72 bp CGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTaGCATTGGCTGACAGGGCATTTTCAGGCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: RNIIGPGESEKS*HWLTGHFQALS
Trigger: TGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CAA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGTTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGA +
Preference number: 3 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWLDATS*AQGSPR
Trigger: TCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAA...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CAA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCAAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 3 (lower is better)
Translates to: QHHWPRGVREELPLADRAKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR TCA 72 bp CCCAGCCAGAAAAAGGAGCCCAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTCCAATCTCCCACACCC +
Preference number: 3 (lower is better)
Translates to: PSQKKEPKPEGK*QRMYHVQSPTP
Trigger: GGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGGGCTCCTTTTTCTGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR TCA 72 bp TGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGTGGTTTTGTCATAGCC +
Preference number: 3 (lower is better)
Translates to: CHWSGSTPQPEE*CHWPGSGFVIA
Trigger: GGCTATGACAAAACCACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR CCA 72 bp GACCTCTCCACAAGGTTCAGATTTAGGCTCAACACCTaGGTGCAGCAGGAGCTTTGGGAACCGCCTCAACCT +
Preference number: 3 (lower is better)
Translates to: DLSTRFRFRLNT*VQQELWEPPQP
Trigger: AGGTTGAGGCGGTTCCCAAAGCTCCTGCTGCACCCAGGTGTTGAGCCTAAATCTGAACCTTGTGGAGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 72 bp AAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATaGGAATCTGCTGAGTGGGTCTTCCCCTTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: KGKVMPVRIPAL*ESAEWVFPFLQ
Trigger: CTGGAGGAAGGGGAAGACCCACTCAGCAGATTCCCATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 72 bp GAAACCCAGACGGGGATCATGCTTGCAGTTTTGGGCTaGGGCTACTATGCTACCCAAGATGAGGGAACTGGA +
Preference number: 3 (lower is better)
Translates to: ETQTGIMLAVLG*GYYATQDEGTG
Trigger: TCCAGTTCCCTCATCTTGGGTAGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CAA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATATTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 3 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CAA 90 bp CCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACTTATAGAGTCCCCGACAAATaGACCTCGCTGGGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PLLCAPTAPSVLLYPNTYRVPDK*TSLGLL
Trigger: AAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTCT...ATAAGTATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CAA 90 bp TGGGAACCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATGCTTGATTAGACTGAGCTaGTCTCCACCCAGGCCACCC +
Preference number: 3 (lower is better)
Translates to: WEPPQPLIHLSSAHSTRCLIRLS*SPPRPP
Trigger: GGGTGGCCTGGGTGGAGACAAGCTCAGTCTAATCAA...GCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp TCCCTCTTCATTTTTCATTCCAAGCAATTCCTCCCAGTTCCTACTCAGAGCCTTCCAGATGCCCCTCCTTaGTGCTCCCACAGCGCCCTC +
Preference number: 3 (lower is better)
Translates to: SLFIFHSKQFLPVPTQSLPDAPP*CSHSAL
Trigger: GAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGG...AAGGCTCTGAGTAGGAACTGGGAGGAATTGCTTGGAATGAAAAATGAAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 3 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR CCA 72 bp TCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTaGGTGAGGGTAGGCCTATTCAGATGCAAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: SSWALSTIKLGG*VRVGLFRCKAS
Trigger: GCTGGCCTTGCATCTGAATAGGCCTACCCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CCA 72 bp CTGCCTGGCCCCAGCTCTTTTGACTTGATAGGGTTCTaGTGTTTGATTAGACTGAGCTTGTCTCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: LPGPSSFDLIGF*CLIRLSLSPPR
Trigger: CCTGGGTGGAGACAAGCTCAGTCTAATCAAACACCAGAACCCTATCAAGTCAAAAGAGCTGGGGCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CAA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CAA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR-3UTR CAA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCCGAGAAGAGCTGCCATaGGCTGACAGGGCATTTTCA +
Preference number: 3 (lower is better)
Translates to: QWARIEERQRVLDATSLAREELP*ADRAFS
Trigger: TGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR TCA 72 bp TTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LAREWFCHSRWL*SGRKRSGNEAL
Trigger: CAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR GCA 72 bp CCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATaGTCCAGTGCTTGTGAAGGAAACCCAGACGGGGAT +
Preference number: 3 (lower is better)
Translates to: PLIHLSSAHSTR*SSACEGNPDGD
Trigger: ATCCCCGTCTGGGTTTCCTTCACAAGCACTGGAGCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 3 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR CAA 90 bp TGCAGTATCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATGATCATGCTTGCAGTTTaGGGCTGGGGCTACTATGCT +
Preference number: 3 (lower is better)
Translates to: CSIHDKGQSHACEDPCTMIMLAV*GWGYYA
Trigger: AGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGAT...CATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGATACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 72 bp CCCCAAAAATCAAGCTCTAGTCAGATGATTGCAGGCTaGTCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: PQKSSSSQMIAG*SKPRRLSGSCS
Trigger: ACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGATCAGCCTGCAATCATCTGACTAGAGCTTGATTTTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 72 bp CACCTTCCCTGCCCCAAAAATCAAGCTCTAGTCAGATaGTTGCAGGCTGATCAAAGCCCAGAAGACTGTCTG +
Preference number: 3 (lower is better)
Translates to: HLPCPKNQALVR*LQADQSPEDCL
Trigger: CAGACAGTCTTCTGGGCTTTGATCAGCCTGCAATCATCTGACTAGAGCTTGATTTTTGGGGCAGGGAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR TCA 72 bp CTCATCACTCAGCTAGAAAGTGGCAGAACCTGGAGTTaGGCCCTGTTTTTAGGCCCTACAACCAGCATTTGG +
Preference number: 3 (lower is better)
Translates to: LITQLESGRTWS*ALFLGPTTSIW
Trigger: CCAAATGCTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CCA 72 bp AAAGCTTTGGCTCCAACTGAGGCTGGGAGAGAAGACTaGGCCTTCAAACCATCTCTGAAACCTGTGACTTCA +
Preference number: 3 (lower is better)
Translates to: KALAPTEAGRED*AFKPSLKPVTS
Trigger: TGAAGTCACAGGTTTCAGAGATGGTTTGAAGGCCCAGTCTTCTCTCCCAGCCTCAGTTGGAGCCAAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR-3UTR CAA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
3UTR-3UTR CAA 90 bp ACTTCTCAGCTCCTTCTCCAGAGGGCAAAAGTCCTTAACCAGCCTGCAGTCTTCATAGGGTTCTGGTGTTaGATTAGACTGAGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: TSQLLLQRAKVLNQPAVFIGFWC*IRLSLS
Trigger: AGACAAGCTCAGTCTAATCAAACACCAGAACCCTAT...GAAGACTGCAGGCTGGTTAAGGACTTTTGCCCTCTGGAGAAGGAGCTGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp AATCCTGAAAAATTCTGGTTTCCTTGGCCAAAGGGCATACAGGTGATGACACCTCTAAAGGACAAAGCTTaGGCTCCAACTGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: NPEKFWFPWPKGIQVMTPLKDKA*APTEAG
Trigger: CCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAG...AGGTGTCATCACCTGTATGCCCTTTGGCCAAGGAAACCAGAATTTTTCAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR-3UTR CAA 90 bp GATCTGGTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: DLVLLRSIAILVLAKGQSFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...GCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCACCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR TCA 72 bp TACAACCAGCATTTGGAGACTCGGTACCTTTCATGTTaGAAAATCCCCAGTGGCCCATTAAGTGGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: YNQHLETRYLSC*KIPSGPLSGSS
Trigger: TGAGCTGCCACTTAATGGGCCACTGGGGATTTTTCAACATGAAAGGTACCGAGTCTCCAAATGCTGGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR GCA 72 bp AGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCTCTGCATTGTAGCCAA +
Preference number: 3 (lower is better)
Translates to: RSSRLLAAFPHS*IVVSVSLHCSQ
Trigger: TTGGCTACAATGCAGAGACACAGAAACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
3UTR CCA 72 bp GAAAGGTTTATTCCTAGTGCTAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: ERFIPSARSQSS*ALSTIKLGGWV
Trigger: CACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCTAGCACTAGGAATAAACCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp TTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCGACACCATCACCTGCTaGAGGTCCTCGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LADRAFSGSVIGQGAHPSDTITC*RSSGRA
Trigger: GGCCCGGCCCGAGGACCTCCAGCAGGTGATGGTGTC...GCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR TCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCCCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFEVGCQ*PAQLQD
Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQEVGCQ*PAQLQD
Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCCTGACACCATCACCTaGTGGAGGTCCTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LADRAFSGSVIGQGAHPSPDTIT*WRSSGR
Trigger: CCGGCCCGAGGACCTCCAGCAGGTGATGGTGTCAGG...GCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR CCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTGACACCATCACCTGCTaGAGGTCCTCGGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFDTITC*RSSGRA
Trigger: GGCCCGGCCCGAGGACCTCCAGCAGGTGATGGTGTC...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000445086.6
CDS-3UTR TCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCAGACCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGQTLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTG...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR TCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCCTTCAGGAAGCTGCCTaGCTTCGCCGTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPLQEAA*LRRSRG
Trigger: TCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAG...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
3UTR CAA 72 bp AGCTTGATGGCCACATCTCCCCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SLMATSPRSFSY*SRWAWKVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR TCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSIEVGS*HHHLLE
Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPLGTSG*GQQRHH
Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCATGGTCTTGATCTCCTaGCCTGGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGMVLIS*PGDPPA
Trigger: GGCGGGCGGATCACCAGGTCAGGAGATCAAGACCAT...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGGGACTCGGCGGAAATaGCGTCCTCTCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGAGTRRK*RPLRAE
Trigger: TTCTGCCCGGAGAGGACGTCATTTCCGCCGAGTCCC...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPPDTIT*WRSCSS
Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGACCTGACACCATCACCTaGTGGAGGTCCTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGPDTIT*WRSSGR
Trigger: CCGGCCCGAGGACCTCCAGCAGGTGATGGTGTCAGG...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000445086.6
CDS-3UTR CCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSASPFP*IGISIV
Trigger: CACAATGGAGATCCCTATCCACGGGAACGGCGAAGC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTTCAGGAAGCTGCCTaGCTTCGCCGTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGLQEAA*LRRSRG
Trigger: TCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAG...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCAGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: QHHWPRGVREELPLADRADGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGLSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCAAGCCTCCCGAGTAGCTaGGACTACAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: QHHWPRGVREELPLADRASLPSS*DYRTTG
Trigger: GCCTGTAGTCCTGTAGTCCCAGCTACTCGGGAGGCT...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPIEVGS*HHHLLE
Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAGACCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSQTLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTG...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR TCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACATGGTCTTGATCTCCTaGCCTGGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHMVLIS*PGDPPA
Trigger: GGCGGGCGGATCACCAGGTCAGGAGATCAAGACCAT...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACTGTGCACTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHCALWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGTGCACA...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR TCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTACTTCCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGATSLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGAAGT...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCTCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGSSSGS*LASPFP
Trigger: CGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCHWLTGHFQALSLVREHPDTIT*WRSCSS
Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLEVGCQ*PAQLQD
Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTGCATCACCCAGTGCATaGTGGGTCTGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALASPSA*WVCSRL
Trigger: CAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGC...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCATCACCCAGTGCATaGTGGGTCTGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGAASPSA*WVCSRL
Trigger: CAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGC...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGGCATCACCCAGTGCATaGTGGGTCTGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMASPSA*WVCSRL
Trigger: CAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGC...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGADTITC*RSCSSP
Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGSGAVR*MAARPC
Trigger: ACAGGGTCTGGCCGCCATCCATCTCACAGCACCACT...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CTGCATCCCGGGGGCCTAGACTCAGCTCCTCTAAGTCTGTTCGGTAGGCATCATCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: LHPGGLDSAPLSLFGRHHQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...ATGATGCCTACCGAACAGACTTAGAGGAGCTGAGTCTAGGCCCCCGGGATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGDGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVLSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGALSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGTTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTCAGACCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVQTLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTG...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR TCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 4 (lower is better)
Translates to: WPRGVREELPLADRAFSGKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...GCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGGAGTCCCCGACAAATTaGCCTCGCTGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWESPTN*PRWACF
Trigger: AAAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTC...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGGGCTGCCTCCACAGGTaGGTGCTGCTGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LMLETKKFTAPSSVSPFLGCLHR*VLLGVG
Trigger: CCCTACCCCCAGCAGCACTCACCTGTGGAGGCAGCC...CAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGTCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGSSSGS*LASPFP
Trigger: CGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLPDTIT*WRSCSS
Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTAGTGCCCGGCCCAGCTaGAGGACACTCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGASARPS*RTLSYL
Trigger: CAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACT...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSEVGCQ*PAQLQD
Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp GCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTGATGCATCACCCAGTGCATaGTGGGTCTGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AFSGSVIGQGAHPSLKSDASPSA*WVCSRL
Trigger: CAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGC...ATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCCAGTCCATGCCAGATaGCCCTCCTTTGTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCPVHAR*PSFVLP
Trigger: TGGGAGCACAAAGGAGGGGCATCTGGCATGGACTGG...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCCCAGACGGGGATCATaGTTGCAGTTTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFPRRGS*LQFWAG
Trigger: CCCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGG...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGCTTCAGGAAGCTGCCTaGCTTCGCCGTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLLQEAA*LRRSRG
Trigger: TCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAG...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QARGQVTKDVPCPISHTLDTITC*RSCSSP
Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMSGAVR*MAARPC
Trigger: ACAGGGTCTGGCCGCCATCCATCTCACAGCACCACT...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR CCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFDGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGATTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGLSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGTTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTCCCCTTCTCTGCAATaGGCACGCATAGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPSPSLQ*ARIEER
Trigger: TCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGATGCAAGGCCAGCAATaGGGCTCCCCATTATCCCCA +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGMQGQQ*GSPLSP
Trigger: TGGGGATAATGGGGAGCCCCATTGCTGGCCTTGCAT...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGGTGAGCCACCGCACCTaGCCAGGTCTCAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQVSHRT*PGLSFQ
Trigger: TTGAAAGCTGAGACCTGGCCAGGTGCGGTGGCTCAC...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTAGCCTCCCGAGTAGCTaGGACTACAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALSLPSS*DYRTTG
Trigger: GCCTGTAGTCCTGTAGTCCCAGCTACTCGGGAGGCT...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCACCAGACACCTCTGTaGCCCCACCCATACTTCTCT +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGHQTPL*PHPYFS
Trigger: AGAGAAGTATGGGTGGGGCCACAGAGGTGTCTGGTG...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFIEVGS*HHHLLE
Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCCAGACCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QWARIEERQRVLDATSLAQTLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTG...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
CDS-3UTR TCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLLGTSG*GQQRHH
Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TGGGAACCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATGCGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: WEPPQPLIHLSSAHSTRCEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...GCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SCHWLTGHFQALSLVREHRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGAGTCCCCGACAAATTaGCCTCGCTGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPESPTN*PRWACF
Trigger: AAAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTC...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCTGGCCCCAGCTCTTTTaGCTTGATAGGGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGWPQLF*LDRVLV
Trigger: CACCAGAACCCTATCAAGTCAAAAGAGCTGGGGCCA...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTAGCTTTGGCTCCAACTaGGGCTGGGAGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFSFGSN*GWERRL
Trigger: CAGTCTTCTCTCCCAGCCTCAGTTGGAGCCAAAGCT...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGAGCTTTGGCTCCAACTaGGGCTGGGAGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGSFGSN*GWERRL
Trigger: CAGTCTTCTCTCCCAGCCTCAGTTGGAGCCAAAGCT...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCATGCTCCAGTGCTTGTaGAGGAAACCCAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFMLQCL*RKPRRG
Trigger: TCCCCGTCTGGGTTTCCTTCACAAGCACTGGAGCAT...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTGGCAGAACCTGGAGTTaGGCCCTGTTTTTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFGRTWS*ALFLGP
Trigger: AGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCC...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGACCTGCTGGAGGTCCTaGTCCAGCCCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGTCWRS*SSPSSS
Trigger: TGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGT...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCACCTGCTGGAGGTCCTaGTCCAGCCCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVTCWRS*SSPSSS
Trigger: TGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGT...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGACCTGCTGGAGGTCCTaGTCCAGCCCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMTCWRS*SSPSSS
Trigger: TGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGT...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVPDTIT*WRSCSS
Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: LADRAFSGSVIGQGAHPSGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...GCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCAGTGCCCGGCCCAGCTaGAGGACACTCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSSARPS*RTLSYL
Trigger: CAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACT...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGAGTGCCCGGCCCAGCTaGAGGACACTCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLSARPS*RTLSYL
Trigger: CAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACT...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWSSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALSSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALFLLKL*GLLAEV
Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGFLLKL*GLLAEV
Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVFLLKL*GLLAEV
Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: QARGQVTKDVPCPISHTLAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSDGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGATGGGCCTGGAAAGTaGCCTGGGCACTCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQDGPGK*PGHSQV
Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATC...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACTTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNLSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCAATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELPLADRAFSGSVIGQGAIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...TGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTTTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGAFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGATGCAAGGCCAGCAATaGGGCTCCCCATTATCCCCA +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGMQGQQ*GSPLSP
Trigger: TGGGGATAATGGGGAGCCCCATTGCTGGCCTTGCAT...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VLMLETKKFTAPSSVSPFEGVVL*DGWRPD
Trigger: GTCTGGCCGCCATCCATCTCACAGCACCACTCCTTC...GAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR TCA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 4 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QARGQVTKDVPCPISHTLRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGGGACTCGGCGGAAATaGCGTCCTCTCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPGTRRK*RPLRAE
Trigger: TTCTGCCCGGAGAGGACGTCATTTCCGCCGAGTCCC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000614314.4
CDS-3UTR TCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCGCAAAGTCATGCCTGTaGGGATCCCTGCACTATGGG +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSAKSCL*GSLHYG
Trigger: CCCATAGTGCAGGGATCCTCACAGGCATGACTTTGC...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp GCTAGAAAGTGGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAGTCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: ARKWQNLELSPVFRPYNQSSSGS*LASPFP
Trigger: CGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA...CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TCCCTCTTCATTTTTCATTCCAAGCAATTCCTCCCAGTTCCTACTCAGAGCCTTGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLFIFHSKQFLPVPTQSLEVGCQ*PAQLQD
Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...AAGGCTCTGAGTAGGAACTGGGAGGAATTGCTTGGAATGAAAAATGAAGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTACCTGTGACTTCAGCTaGCTGGCCCCAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSTCDFS*LAPALL
Trigger: CAAAAGAGCTGGGGCCAGGCAGCTGAAGTCACAGGT...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGTTCCACCCCAGTCCATaGCAGATGCCCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQFHPSP*QMPLLC
Trigger: ACAAAGGAGGGGCATCTGGCATGGACTGGGGTGGAA...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCACCTCTCTGCCTGGGATaGTCTTCCCTTTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDAPLCLG*SSLYPA
Trigger: GGCAGGGTAAAGGGAAGAGCATCCCAGGCAGAGAGG...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGCTTCAGGAAGCTGCCTaGCTTCGCCGTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLLQEAA*LRRSRG
Trigger: TCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAG...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVSGAVR*MAARPC
Trigger: ACAGGGTCTGGCCGCCATCCATCTCACAGCACCACT...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR CCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSSSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSFLLKL*GLLAEV
Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPFLLKL*GLLAEV
Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGATAGCCAAGTTGGGCTaGGAGCAGCTCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQIAKLG*EQLTAP
Trigger: AGGAGCAGTGAGCTGCTCCCAGCCCAACTTGGCTAT...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGTTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACTCCCCTTCTCTGCAATaGGCACGCATAGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHSPSLQ*ARIEER
Trigger: TCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGATGCAAGGCCAGCAATaGGGCTCCCCATTATCCCCA +
Preference number: 4 (lower is better)
Translates to: QARGQVTKDVPCPISHTLMQGQQ*GSPLSP
Trigger: TGGGGATAATGGGGAGCCCCATTGCTGGCCTTGCAT...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
3UTR CAA 72 bp GGCCCCAGCTCTTTTGACTTGATAGGGTTCTGGTGTTaGATTAGACTGAGCTTGTCTCCACCCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GPSSFDLIGFWC*IRLSLSPPRPP
Trigger: GGGTGGCCTGGGTGGAGACAAGCTCAGTCTAATCAAACACCAGAACCCTATCAAGTCAAAAGAGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR CAA 72 bp GTGAAGGAAACCCAGACGGGGATCATGCTTGCAGTTTaGGGCTGGGGCTACTATGCTACCCAAGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: VKETQTGIMLAV*GWGYYATQDEG
Trigger: TCCCTCATCTTGGGTAGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGGTTTCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp AGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTTCAGACCCTGTGGGGATaGGTCCATCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQRSSRLLAAFPHSCIVVQTLWG*VHHQSP
Trigger: GGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTG...AACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR TCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLLGTSG*GQQRHH
Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR TCA 90 bp GTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: VLMLETKKFTAPSSVSPFLGTSG*GQQRHH
Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...GAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR TCA 90 bp TGCAGTATCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATGCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: CSIHDKGQSHACEDPCTMLGTSG*GQQRHH
Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...CATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGATACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGAGCACACCCCAGCCTaGAGAGTGATGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPEHTPA*RVMPLA
Trigger: GGCCAATGGCATCACTCTTCAGGCTGGGGTGTGCTC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTTGGCCCCAGCTCTTTTaGCTTGATAGGGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPWPQLF*LDRVLV
Trigger: CACCAGAACCCTATCAAGTCAAAAGAGCTGGGGCCA...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTCTATGCTACCCAAGATaGGGGAACTGGAGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPLCYPR*GNWSLD
Trigger: ATCTAGACTCCAGTTCCCTCATCTTGGGTAGCATAG...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAGTGCTTGTGAAGGAAACCCAGACGGGGATCATGCTTGCAGTTTTGGGCTGGCGGTACCTTTCATGTTaGAAAATCCCCAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PVLVKETQTGIMLAVLGWRYLSC*KIPSGP
Trigger: TGGGCCACTGGGGATTTTTCAACATGAAAGGTACCG...CCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGGTTTCCTTCACAAGCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGGCCAGAAGGAGTGGTaGTGTGAGATGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LVTNVLMLETKKFTAPSSGQKEW*CEMDGG
Trigger: GCCGCCATCCATCTCACAGCACCACTCCTTCTGGCC...GCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAGCTTGATGTTGAACTaGTGCAGGGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGSLMLN*CRVCSS
Trigger: GCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCT...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCAGCTTGATGTTGAACTaGTGCAGGGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSSLMLN*CRVCSS
Trigger: GCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCT...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGTTTTCTTCCAGGAACTTGAGCTTGATGGCCACATCTCCCCGCAGCTTCTCACCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFSSRNLSLMATSPRSFSPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...TGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR GCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTGTAGGCCTATTCAGATaGAAGGCCAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSVGLFR*KASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTAC...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCATAACAGTTGCTTTGTaGACTGTGGGGATGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPITVAL*TVGMSP
Trigger: TGGACTCATCCCCACAGTGCACAAAGCAACTGTTAT...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR GCA 90 bp CCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCGCACATAGCACAAGATaGTCCAGTGCTTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PLADRAFSGSVIGQGAHPAHSTR*SSACEG
Trigger: TCCTTCACAAGCACTGGAGCATCTTGTGCTATGTGC...GGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp TGCAGTATCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATGGGCTCAACACCTGGGTaGAGCAGGAGCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: CSIHDKGQSHACEDPCTMGSTPG*SRSFGN
Trigger: GTTCCCAAAGCTCCTGCTGCACCCAGGTGTTGAGCC...CATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGATACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATAGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIASPFP*IGISIV
Trigger: CACAATGGAGATCCCTATCCACGGGAACGGCGAAGC...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTCTTCAGGAAGCTGCCTaGCTTCGCCGTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSLQEAA*LRRSRG
Trigger: TCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAG...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp AATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCAGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NVLMLETKKFTAPSSVSPDTITC*RSCSSP
Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...TGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPDTITC*RSCSSP
Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDASSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGTCCCGATGGGCCTaGAAAGTGGCCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSLSRWA*KVAWAL
Trigger: GAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAA...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: QARGQVTKDVPCPISHTLPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTATTAAACTGGGTGGGTaGGTGAGGGTAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFIKLGG*VRVGLF
Trigger: GAATAGGCCTACCCTCACCCACCCACCCAGTTTAAT...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTGGATCCCGTCCGTCATaGCTAGGAAAGGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSGSRPS*LGKVLE
Trigger: CTCCAATACCTTTCCTAGCCATGACGGACGGGATCC...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAGCTAGCCTCTCTGCCTaGGATGCTCTTCCCTTTACC +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDAASLSA*DALPFT
Trigger: GGTAAAGGGAAGAGCATCCCAGGCAGAGAGGCTAGC...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CAA 72 bp ATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: IEERQRVLDATS*AQGSPRRAAIG
Trigger: GCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCAGGTCCACAGTCCGTaGGCCTCGACCAAATCGTTC +
Preference number: 4 (lower is better)
Translates to: LMLETKKFTAPSSVSPFLQVHSP*ASTKSF
Trigger: GAACGATTTGGTCGAGGCTCACGGACTGTGGACCTG...CAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR TCA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRNIIGPGESEKSCHWLTACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...TGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCATAGCCGTTGGCTGTaGAGTGGAAGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWHSRWL*SGRKRS
Trigger: AGATCTTTTCCTTCCACTTCACAGCCAACGGCTATG...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp TCCATGGTCTTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCCCAGCCTGAAGAGTaGTGCCATTGGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SMVLVTNVLMLETKKFTAPQPEE*CHWPGS
Trigger: ACTCCCTGGCCAATGGCATCACTCTTCAGGCTGGGG...AGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR TCA 90 bp TTGTTTTCTTCCAGGAACTTGAGCTTGATGGCCACATCTCCCCGCAGCTTCTCAAGAGCTGCCATTGGCTaGCAGGGCATTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LFSSRNLSLMATSPRSFSRAAIG*QGIFRL
Trigger: GAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCT...TGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR TCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCAGCAGTCCCTGGCAAATaGAAGCACTCAGTAAATATT +
Preference number: 4 (lower is better)
Translates to: QHHWPRGVREELPLADRAAVPGK*KHSVNI
Trigger: AATATTTACTGAGTGCTTTCATTTGCCAGGGACTGC...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGAGCTGCAGTATCCATaGCAAAGGGCAAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPELQYP*QRAKSC
Trigger: GCATGACTTTGCCCTTTGTCATGGATACTGCAGCTC...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGCAGATGATTGCAGGCTaGTCAAAGCCCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQQMIAG*SKPRRL
Trigger: CAGTCTTCTGGGCTTTGATCAGCCTGCAATCATCTG...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCTCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LVTNVLMLETKKFTAPSSSSSGS*LASPFP
Trigger: CGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA...GCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp AGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTTCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQRSSRLLAAFPHSCIVVPDTIT*WRSCSS
Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...AACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTAGTGCCCGGCCCAGCTaGAGGACACTCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: ETKKFTAPSSVSPFLHSSSARPS*RTLSYL
Trigger: CAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACT...ACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCAAGTGCCCGGCCCAGCTaGAGGACACTCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSSARPS*RTLSYL
Trigger: CAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACT...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR GCA 90 bp AGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTTGCATCACCCAGTGCATaGTGGGTCTGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RQRSSRLLAAFPHSCIVVASPSA*WVCSRL
Trigger: CAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGC...AACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACAGCTTGATGTTGAACTaGTGCAGGGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNSLMLN*CRVCSS
Trigger: GCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCT...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTAGCTTGATGTTGAACTaGTGCAGGGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVSLMLN*CRVCSS
Trigger: GCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCT...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCACCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAGTAGGCCTATTCAGATaGAAGGCCAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDAVGLFR*KASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTAC...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCACCTGTGACTTCAGCTaGCTGGCCCCAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGTCDFS*LAPALL
Trigger: CAAAAGAGCTGGGGCCAGGCAGCTGAAGTCACAGGT...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCGATGCCCCTCCTTTGTaGTCCCACAGCGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLLRSIAILVLAKGQSFGDAPPL*SHSALC
Trigger: ACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATC...GCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCACCAGTCCATGCCAGATaGCCCTCCTTTGTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSPVHAR*PSFVLP
Trigger: TGGGAGCACAAAGGAGGGGCATCTGGCATGGACTGG...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp CCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACTTATTTCCACCCCAGTCCATaGCAGATGCCCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PLLCAPTAPSVLLYPNTYFHPSP*QMPLLC
Trigger: ACAAAGGAGGGGCATCTGGCATGGACTGGGGTGGAA...ATAAGTATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKDTITC*RSCSSP
Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LVTNVLMLETKKFTAPSSSGAVR*MAARPC
Trigger: ACAGGGTCTGGCCGCCATCCATCTCACAGCACCACT...GCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCACAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCTAGAAAGTGGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAGCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: ARKWQNLELSPVFRPYNQPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGATGCAAGGCCAGCAATaGGGCTCCCCATTATCCCCA +
Preference number: 4 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRMQGQQ*GSPLSP
Trigger: TGGGGATAATGGGGAGCCCCATTGCTGGCCTTGCAT...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp CCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACTTATGTGCAGCAGGAGCTTTaGGAACCGCCTCAACCTCTT +
Preference number: 4 (lower is better)
Translates to: PLLCAPTAPSVLLYPNTYVQQEL*EPPQPL
Trigger: AAGAGGTTGAGGCGGTTCCCAAAGCTCCTGCTGCAC...ATAAGTATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp GCTAGAAAGTGGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAGTTTAGGCTCAACACCTaGGTGCAGCAGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ARKWQNLELSPVFRPYNQFRLNT*VQQELW
Trigger: CCAAAGCTCCTGCTGCACCCAGGTGTTGAGCCTAAA...CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGAATCCTGAAAAATTCTaGTTTCCTTGGCCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQNPEKF*FPWPKG
Trigger: GCCCTTTGGCCAAGGAAACCAGAATTTTTCAGGATT...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAAGGATCCCTGCACTATaGGAATCTGCTGAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDARIPAL*ESAEWV
Trigger: GACCCACTCAGCAGATTCCCATAGTGCAGGGATCCT...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTCACTCAGCTAGAAAGTaGCAGAACCTGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSHSARK*QNLELS
Trigger: GCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTG...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp AATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCAATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NVLMLETKKFTAPSSVSPIEVGS*HHHLLE
Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...TGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR TCA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTAAGCCAGAGGGCAAGTaGCAAAGGATGTACCATGTC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVKPEGK*QRMYHV
Trigger: GACATGGTACATCCTTTGTCACTTGCCCTCTGGCTT...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACTTATACTATGGGAATCTGCTaGGTGGGTCTTCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLLCAPTAPSVLLYPNTYTMGIC*VGLPLP
Trigger: AGGAAGGGGAAGACCCACTCAGCAGATTCCCATAGT...ATAAGTATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGCAAGCTCTAGTCAGATaGTTGCAGGCTGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQQALVR*LQADQS
Trigger: GCTTTGATCAGCCTGCAATCATCTGACTAGAGCTTG...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGTCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKSSSGS*LASPFP
Trigger: CGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCACCTGCTGGAGGTCCTaGTCCAGCCCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TNVLMLETKKFTAPSSVSTCWRS*SSPSSS
Trigger: TGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGT...GGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp TTGTTTTCTTCCAGGAACTTGAGCTTGATGGCCACATCTCCCCGCAGCTTCTCAACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LFSSRNLSLMATSPRSFSTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...TGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR GCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHSSSCL*ITLILF
Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMSSSCL*ITLILF
Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCSSSCL*ITLILF
Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATATGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TGGGAACCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATGCTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WEPPQPLIHLSSAHSTRCLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...GCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGAGCTTGATGTTGAACTaGTGCAGGGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRSLMLN*CRVCSS
Trigger: GCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCT...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCACACCCTGGGGCTaGCCTTCCCAATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKPTPWG*PSQCLS
Trigger: AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGG...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGTAGGCCTATTCAGATaGAAGGCCAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLVGLFR*KASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTAC...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCATCACTGTTTTGTAGTTaGCTGGTTACTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: QHHWPRGVREELPLADRASLFCS*LVTSFP
Trigger: AGGGAAAGAAGTAACCAGGCAACTACAAAACAGTGA...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GCGCCCTCTGTACTTCTGTATCCTAATACTTATCACTGTTTTGTAGTTGCCTGGGATGCCCCTCCTTTGTaGTCCCACAGCGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: APSVLLYPNTYHCFVVAWDAPPL*SHSALC
Trigger: ACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATC...CCAGGCAACTACAAAACAGTGATAAGTATTAGGATACAGAAGTACAGAGGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: ETKKFTAPSSVSPFLHSSASPFP*IGISIV
Trigger: CACAATGGAGATCCCTATCCACGGGAACGGCGAAGC...ACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKSGAVR*MAARPC
Trigger: ACAGGGTCTGGCCGCCATCCATCTCACAGCACCACT...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
CDS-3UTR CCA 90 bp AGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTTCAGGGCCAGAAGGAGTaGTGCTGTGAGATGGATGGC +
Preference number: 4 (lower is better)
Translates to: RQRSSRLLAAFPHSCIVVQGQKE*CCEMDG
Trigger: GCCATCCATCTCACAGCACCACTCCTTCTGGCCCTG...AACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp TTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LMLETKKFTAPSSVSPFLSSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...CAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp GAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ELPLADRAFSGSVIGQGAHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...TGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QRASDKGCTMSNLPHPGAHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGGCCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKAWKVA*ALSSRP
Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGC...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGGGTTTCTCAGCTCCTaGAGGCCGCAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPGFLSS*RPQLDV
Trigger: AACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCAATCTCCCACACCCTaGGGCTGCCCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKQSPTP*GCPSQC
Trigger: ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTG...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCCCATTGGCCAGGGAGTaGTTTTGTCATAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: QWARIEERQRVLDATSLAPLARE*FCHSRW
Trigger: CCAACGGCTATGACAAAACCACTCCCTGGCCAATGG...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTATTAAACTGGGTGGGTaGGTGAGGGTAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVIKLGG*VRVGLF
Trigger: GAATAGGCCTACCCTCACCCACCCACCCAGTTTAAT...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGTGTTTTGTAGTTGCCTaGTTACTTCTTTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQCFVVA*LLLSLS
Trigger: ACTGAGGGAAAGAAGTAACCAGGCAACTACAAAACA...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GATGAAGGTCAGCAAACCCAACCCCCTCTGGATCTGGTGCTCTTAAGATCCATAGGATCCCGTCCGTCATaGCTAGGAAAGGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: DEGQQTQPPLDLVLLRSIGSRPS*LGKVLE
Trigger: CTCCAATACCTTTCCTAGCCATGACGGACGGGATCC...TATGGATCTTAAGAGCACCAGATCCAGAGGGGGTTGGGTTTGCTGACCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp TCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAACTGAGGCTGGGAGAGAACTTGCAGTTTTGGGCTaGGGCTACTATGCTACCCAA +
Preference number: 4 (lower is better)
Translates to: SWCWLKDKALAPTEAGRELAVLG*GYYATQ
Trigger: TTGGGTAGCATAGTAGCCCCAGCCCAAAACTGCAAG...TTCTCTCCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGAAATTCTGGTTTCCTTaGCCAAAGGGCATACAGGTG +
Preference number: 4 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWKFWFP*PKGIQV
Trigger: CACCTGTATGCCCTTTGGCCAAGGAAACCAGAATTT...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGTTGAAAAATCCCCAGTaGCCCATTAAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: REELPLADRAFSGSVIGQLKNPQ*PIKWQL
Trigger: GAGCTGCCACTTAATGGGCCACTGGGGATTTTTCAA...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKIEVGS*HHHLLE
Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCACTTTTCTCCAGCAATaGCCCGAGCCACCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LVTNVLMLETKKFTAPSSTFLQQ*PEPPHL
Trigger: GAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGT...GCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGTGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: ETKKFTAPSSVSPFLHSSGHSHT*ASSHAA
Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCC...ACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSSSSCL*ITLILF
Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGTAGGCCTATTCAGATaGAAGGCCAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPVGLFR*KASNGA
Trigger: AGCCCCATTGCTGGCCTTGCATCTGAATAGGCCTAC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTCGTTCTGATAACAGTTaGTTTGTGCACTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSRSDNS*FVHCGD
Trigger: ATCCCCACAGTGCACAAAGCAACTGTTATCAGAACG...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR GCA 90 bp CCAGTTCCTACTCAGAGCCTTCATTATATGCTAGCCTCTCTGCCTGGGATGCTCAAGGACCACCTTCCCTaGCCCAAAAATCAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: PVPTQSLHYMLASLPGMLKDHLP*PKNQAL
Trigger: TAGAGCTTGATTTTTGGGGCAGGGAAGGTGGTCCTT...GAGCATCCCAGGCAGAGAGGCTAGCATATAATGAAGGCTCTGAGTAGGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGAGCGTGTCTTCCATGGTCTTGGTGACCAATGTGTTGATGCTAGAGACAAAGGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: MSVSSMVLVTNVLMLETKASPFP*IGISIV
Trigger: CACAATGGAGATCCCTATCCACGGGAACGGCGAAGC...CTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGAAGACACGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR CCA 90 bp GATCTGGTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: DLVLLRSIAILVLAKGQSSSGDF*LRSAKA
Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...GCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCACCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTTCAGGCTCTGTCATTaGTCAGGGAGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: VLLRSIAILVLAKGQSFGFRLCH*SGSTPQ
Trigger: CTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAA...GCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTCCCCTTCTCTGCAATaGGCACGCATAGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPSPSLQ*ARIEER
Trigger: TCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp CCAGCATTTGGAGACTCGGTACCTTTCATGTTGAAAAATCCCCAGTGGCCCATTTCCCCTTCTCTGCAATaGGCACGCATAGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PAFGDSVPFMLKNPQWPISPSLQ*ARIEER
Trigger: TCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA...AATGGGCCACTGGGGATTTTTCAACATGAAAGGTACCGAGTCTCCAAATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp GCGCCCTCTGTACTTCTGTATCCTAATACTTATCACTGTTTTGTAGTTGCCTGGGTGAGCCACCGCACCTaGCCAGGTCTCAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: APSVLLYPNTYHCFVVAWVSHRT*PGLSFQ
Trigger: TTGAAAGCTGAGACCTGGCCAGGTGCGGTGGCTCAC...CCAGGCAACTACAAAACAGTGATAAGTATTAGGATACAGAAGTACAGAGGGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTGGATCCCGTCCGTCATaGCTAGGAAAGGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSGSRPS*LGKVLE
Trigger: CTCCAATACCTTTCCTAGCCATGACGGACGGGATCC...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CCA 90 bp TGGGAACCGCCTCAACCTCTTATCCACCTGAGTTCAGCACATAGCACAAGATGCTCATGCTTGCAGTTTTaGGCTGGGGCTACTATGCTA +
Preference number: 4 (lower is better)
Translates to: WEPPQPLIHLSSAHSTRCSCLQF*AGATML
Trigger: TAGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGA...GCATCTTGTGCTATGTGCTGAACTCAGGTGGATAAGAGGTTGAGGCGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CAA 72 bp CCTCATCACTCAGCTAGAAAGTGGCAGAACCTGGAGTaGAGCCCTGTTTTTAGGCCCTACAACCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: PHHSARKWQNLE*SPVFRPYNQHL
Trigger: CAAATGCTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGCTGAGTGATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR TCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTCAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCA +
Preference number: 4 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSQCWFH*GWVLTP
Trigger: TGGTGTCAGGACCCAACCTCAATGAAACCAGCATTG...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp TCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAACTGAGGCTGGGAGAGAAAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SWCWLKDKALAPTEAGRESSSCL*ITLILF
Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...TTCTCTCCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGAACTGCTGCAGGGTCTaGTCCAGCTGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKNCCRV*SSCFWF
Trigger: GAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTT...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp GCGCCCTCTGTACTTCTGTATCCTAATACTTATCACTGTTTTGTAGTTGCCTGGGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: APSVLLYPNTYHCFVVAWASPFP*IGISIV
Trigger: CACAATGGAGATCCCTATCCACGGGAACGGCGAAGC...CCAGGCAACTACAAAACAGTGATAAGTATTAGGATACAGAAGTACAGAGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCAATTAAACTGGGTGGGTaGGTGAGGGTAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSIKLGG*VRVGLF
Trigger: GAATAGGCCTACCCTCACCCACCCACCCAGTTTAAT...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATACCTACAACCAGCATTTaGAGACTCGGTACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIPTTSI*RLGTFH
Trigger: ATGAAAGGTACCGAGTCTCCAAATGCTGGTTGTAGG...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
3UTR CAA 72 bp CCTCTGGATCTGGTGCTCTTAAGATCCATAGCTATCTaGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PLDLVLLRSIAI*VLAKGQSFGSN
Trigger: GTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCACCAGATCCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
3UTR CAA 72 bp TTGTGCATCACCTTGATCTTGTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCTCCCCGCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LCITLILFSSRN*SLMATSPRSFS
Trigger: TGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR TCA 90 bp TGCAGTATCCATGACAAAGGGCAAAGTCATGCCTGTGAGGATCCCTGCACTATGGAACTGGAGTCTAGATaGCACTATCTTAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSIHDKGQSHACEDPCTMELESR*HYLKPQ
Trigger: CTGAGGCTTAAGATAGTGTCATCTAGACTCCAGTTC...CATAGTGCAGGGATCCTCACAGGCATGACTTTGCCCTTTGTCATGGATACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKWKSSS*LCITLI
Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGTTGATGTTGAACTGCTaGAGGGTCTGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKLMLNC*RVCSSC
Trigger: ACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAA...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTGCTGTATGAATGAATaGATGATGAAGGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVCCMNE*MMKVSK
Trigger: TTTGCTGACCTTCATCATGCATTCATTCATACAGCA...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACTGCTGTATGAATGAATaGATGATGAAGGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHCCMNE*MMKVSK
Trigger: TTTGCTGACCTTCATCATGCATTCATTCATACAGCA...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp TCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGTATCCATGACAAAGGGCAAAGTCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SKPRRLSGSCSIHDKGQSHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...ACTTTGCCCTTTGTCATGGATACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAA +
Preference number: 4 (lower is better)
Translates to: SCHWLTGHFQALSLVREHRSQSS*ALSTIK
Trigger: TTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGACTTGATAGGGTTCTaGTGTTTGATTAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVDLIGF*CLIRLS
Trigger: GCTCAGTCTAATCAAACACCAGAACCCTATCAAGTC...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR TCA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPACASP*SCFLPG
Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR TCA 90 bp GTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCAAGGATCAAGTTCTCTaGCACCAGCCTCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VLLRSIAILVLAKGQSFGKDQVL*HQPLSD
Trigger: ATCTGAGAGAGGCTGGTGTCAGAGAACTTGATCCTT...GCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR GCA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR GCA 90 bp GTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLMLETKKFTAPSSVSPFAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...GAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR GCA 90 bp GCTAGAAAGTGGCAGAACCTGGAGTTGAGCCCTGTTTTTAGGCCCTACAACCAGTCACTGTTTTGTAGTTaGCTGGTTACTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARKWQNLELSPVFRPYNQSLFCS*LVTSFP
Trigger: AGGGAAAGAAGTAACCAGGCAACTACAAAACAGTGA...CTGGTTGTAGGGCCTAAAAACAGGGCTCAACTCCAGGTTCTGCCACTTTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CCA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAA +
Preference number: 4 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPRSQSS*ALSTIK
Trigger: TTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CCA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCATGTTTTGTAGTTGCCTaGTTACTTCTTTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SPSLQWARIEERQRVLDACFVVA*LLLSLS
Trigger: ACTGAGGGAAAGAAGTAACCAGGCAACTACAAAACA...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCATCATATTCCAGCCTaGCAGCCTCATACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKHHIPA*QPHTVS
Trigger: TGAAACAGTATGAGGCTGCCAGGCTGGAATATGATG...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CCA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCAGACTTGATAGGGTTCTaGTGTTTGATTAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLQWARIEERQRVLDATSDLIGF*CLIRLS
Trigger: GCTCAGTCTAATCAAACACCAGAACCCTATCAAGTC...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR GCA 90 bp ATGAGCGTGTCTTCCATGGTCTTGGTGACCAATGTGTTGATGCTAGAGACAAAGGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MSVSSMVLVTNVLMLETKAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...CTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGAAGACACGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR CCA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGAGATCCCAATCTTCTTaGGCTCTAAGCACAATTAAA +
Preference number: 4 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRRSQSS*ALSTIK
Trigger: TTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR TCA 90 bp TTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAACGCAGTCCCTGGCAAATaGAAGCACTCAGTAAATATT +
Preference number: 4 (lower is better)
Translates to: LRSIAILVLAKGQSFGSNAVPGK*KHSVNI
Trigger: AATATTTACTGAGTGCTTTCATTTGCCAGGGACTGC...GTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR GCA 90 bp TTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAACGCGTTTCCCCATTCTTaGATAGTAGTTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LRSIAILVLAKGQSFGSNAFPHS*IVVSVS
Trigger: AGACACAGAAACTACTATGCAAGAATGGGGAAACGC...GTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS TCA 90 bp ATGCCCCGAGCCACCTCATCTCCAGGGCCAGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGACCCTGTGGGGATGAGTCCATCACCA +
Preference number: 5 (lower is better)
Translates to: MPRATSSPGPEGVVL*DGWRPDPVGMSPSP
Trigger: TGGTGATGGACTCATCCCCACAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGCTCGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000525235.1
ENST00000531037.5
CDS GCA 90 bp CAGTGCATGCTGGGTCTGCAGCAGGCTGTAGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGACACTCTCATACTTGCGCTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: QCMLGLQQAVEVGCQ*PAQLQDTLILALRL
Trigger: GAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTCTACAGCCTGCTGCAGACCCAGCATGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000614314.4
CDS TCA 90 bp CCCATAGCCACCAGACACAATGCTGGTTTCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAGGTCCTCGGGCCGGGCCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PIATRHNAGFIEVGS*HHHLLEVLGPGRSS
Trigger: GGAAGAGCGGCCCGGCCCGAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000445086.6
CDS-3UTR CAA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS GCA 90 bp GGTGGGCTGTCAGTGCCCGGCCCAGCTGCAGGACACTCTCATACTTaGGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGLSVPGPAAGHSHT*ASSHAATQSAALAP
Trigger: TGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000614314.4
CDS TCA 90 bp CATCACCAGAGCCCCCATAGCCACCAGACACAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCATCACCTGCTGGAGGTCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: HHQSPHSHQTQCWFH*GWVLTPSPAGGPRA
Trigger: GGCCCGAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGGGGCTCTGGTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000445086.6
CDS GCA 90 bp ATCACCTGCTGGAGGTCCTGCTCCAGCCCATCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCGTGGATAGGGATCTCCATTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ITCWRSCSSPSSSGS*LASPFPWIGISIVA
Trigger: AGCCACAATGGAGATCCCTATCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000525235.1
ENST00000530410.1
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGACCAGATGCCCCTCCTTaGTGCTCCCACAGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGPDAPP*CSHSAL
Trigger: GAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGG...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS TCA 90 bp ATGCCCCGAGCCACCTCATCTCCAGGGCCAGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGACCCTAAAGGATCAAGTTCTCTGACA +
Preference number: 5 (lower is better)
Translates to: MPRATSSPGPEGVVL*DGWRPDPKGSSSLT
Trigger: TGTCAGAGAACTTGATCCTTTAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGCTCGGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPLDATS*AQGSPR
Trigger: TCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAA...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: WPRGVREELPLADRAFSGTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...GCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: GCTMSNLPHPGAALPNVFSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...AAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGCGAGAAGAGCTGCCATaGGCTGACAGGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQREELP*ADRAFS
Trigger: TGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGGGCTTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: SHTLGLPFPMSFLIAKLGLDATS*AQGSPR
Trigger: TCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAA...GCCCAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTAGAGTCCCCGACAAATaGACCTCGCTGGGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QRASDKGCTMSNLPHPGARVPDK*TSLGLL
Trigger: AAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTCT...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTAGAGTCCCCGACAAATaGACCTCGCTGGGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCRVPDK*TSLGLL
Trigger: AAGCAGGCCCAGCGAGGTCAATTTGTCGGGGACTCT...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS TCA 90 bp CATCACCAGAGCCCCCATAGCCACCAGACACAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCATCACCTGCTGGAGGTCCTATAGGC +
Preference number: 5 (lower is better)
Translates to: HHQSPHSHQTQCWFH*GWVLTPSPAGGPIG
Trigger: GCCTATAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGGGGCTCTGGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529847.1
CDS TCA 90 bp TGCTGTGAGATGGATGGCGGCCAGACCCTAAAGGATCAAGTTCTCTaGCACCAGCCTCTCTCAGATACACCAGACACCTCTGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: CCEMDGGQTLKDQVL*HQPLSDTPDTSVAP
Trigger: TGGGGCCACAGAGGTGTCTGGTGTATCTGAGAGAGGCTGGTGTCAGAGAACTTGATCCTTTAGGGTCTGGCCGCCATCCATCTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS GCA 90 bp GAATCAAACAGAAGCACCTGCTCCAGCCCATCATCTTCAGGAAGCTaGCTGGCTTCGCCGTTCCCGTGGATAGGGATCTCCATTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ESNRSTCSSPSSSGS*LASPFPWIGISIVA
Trigger: AGCCACAATGGAGATCCCTATCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGATGGGCTGGAGCAGGTGCTTCTGTTTGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529847.1
CDS-3UTR CAA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGGTTTCATTGAGGTaGGGTCCTGACACCATCACC +
Preference number: 5 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGLVSLR*GPDTIT
Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACCAG...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CAA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QVTKDVPCPISHTLGLPFRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...GAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPLADRAFSGSVIGQGAHRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...GTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: MSNLPHPGAALPNVFLDSSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...GCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGATCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCCAGGCCCTCTTCCCACCATAGCAATGTGGGCAAAACTGGTGTCAGGCCCCAGAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: SRPSSHHSNVGKTGVRPQKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...CTGGGGCCTGACACCAGTTTTGCCCACATTGCTATGGTGGGAAGAGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 5 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTTTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 5 (lower is better)
Translates to: QRMYHVQSPTPWGCPSQCFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...ACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGTTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 5 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCAGTGCTTGTGAAGGAAACCCAGACGGGGATCATGCTTGCAGTTTTGGGCTGGTTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 5 (lower is better)
Translates to: PVLVKETQTGIMLAVLGWFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...CCAGCCCAAAACTGCAAGCATGATCCCCGTCTGGGTTTCCTTCACAAGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTGATTAGACTGAGCTaGTCTCCACCCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVLIRLS*SPPRPP
Trigger: GGGTGGCCTGGGTGGAGACAAGCTCAGTCTAATCAA...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS GCA 90 bp GTAGCCAAATTCCTCTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGGTCCACAGTCCGTGAGCCTCGACCAAAT +
Preference number: 5 (lower is better)
Translates to: VAKFLLRFVSRSNSI*SSSSRSTVREPRPN
Trigger: ATTTGGTCGAGGCTCACGGACTGTGGACCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGAGGAATTTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS-3UTR CAA 90 bp AGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGCTGGTTTCATTGAGGTaGGGTCCTGACACCATCACC +
Preference number: 5 (lower is better)
Translates to: SQRASDKGCTMSNLPHPGLVSLR*GPDTIT
Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACCAG...CCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTCTGGTTTCATTGAGGTaGGGTCCTGACACCATCACC +
Preference number: 5 (lower is better)
Translates to: QRASDKGCTMSNLPHPGALVSLR*GPDTIT
Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACCAG...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTGATAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: AFSGSVIGQGAHPSLKSDRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...ATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QARGQVTKDVPCPISHTLRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PSQRASDKGCTMSNLPHPRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...AGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGTGGCCAGGAAGATAGACAGGGCAGCAACTTCTGGGCCTCCAGGCCCTCTTCCTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CGQEDRQGSNFWASRPSSCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...GGAAGAGGGCCTGGAGGCCCAGAAGTTGCTGCCCTGTCTATCTTCCTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: RRNIIGPGESEKSCHWLTKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...TGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCCTGGAGGCCGCAGCTaGATGTTGAACTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGPGGRS*MLNCCR
Trigger: CCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGG...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTCGAGAAGAGCTGCCATaGGCTGACAGGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: QRASDKGCTMSNLPHPGAREELP*ADRAFS
Trigger: TGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACCGAGAAGAGCTGCCATaGGCTGACAGGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SCHWLTGHFQALSLVREHREELP*ADRAFS
Trigger: TGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGTTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLLDATS*AQGSPR
Trigger: TCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAA...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTTAGACGCAACATCATaGGCCCAGGGGAGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSLDATS*AQGSPR
Trigger: TCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAA...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGTTGATTAGACTGAGCTaGTCTCCACCCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLLIRLS*SPPRPP
Trigger: GGGTGGCCTGGGTGGAGACAAGCTCAGTCTAATCAA...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp GAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACTAAAGGACAAAGCTTaGGCTCCAACTGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ELPLADRAFSGSVIGQGALKDKA*APTEAG
Trigger: CCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAG...TGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACACCCTACAACCAGCATTaGGAGACTCGGTACCTTTCA +
Preference number: 5 (lower is better)
Translates to: RRNIIGPGESEKSCHWLTPYNQH*ETRYLS
Trigger: TGAAAGGTACCGAGTCTCCAAATGCTGGTTGTAGGG...TGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS GCA 90 bp GACACAATGCTGGTTTCATTGAGGTTGGGTCCTGACACCATCACCTaGTGGAGGTCCTATAGGCCAGAGAAGAGGGGTTGCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DTMLVSLRLGPDTIT*WRSYRPEKRGCFRN
Trigger: GTTCCTGAAGCAACCCCTCTTCTCTGGCCTATAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529847.1
CDS CCA 90 bp GGAACTCGGACTTTGCGCGGTGAGAACCAAATCCTGATATACATATaGCCTCCTTGGGGGTTAGAGGAGGGGTTTGCAGGGAGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: GTRTLRGENQILIYI*PPWGLEEGFAGSCW
Trigger: CCAACAACTCCCTGCAAACCCCTCCTCTAACCCCCAAGGAGGCCATATGTATATCAGGATTTGGTTCTCACCGCGCAAAGTCCGAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS-3UTR CAA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGTCCAGGAACTTGAGCTaGATGGCCACATCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLSRNLS*MATSPR
Trigger: GCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGA...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQVTKDVPCPISHTLGLPCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...GGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: KGCTMSNLPHPGAALPNVKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...GACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTTTTCAGGCTCTGTCATaGGTCAGGGAGCACACCCCA +
Preference number: 5 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVFQALS*VREHTP
Trigger: TGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAA...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGCGAGAAGAGCTGCCATaGGCTGACAGGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: QARGQVTKDVPCPISHTLREELP*ADRAFS
Trigger: TGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAAGCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGCTAAAGGACAAAGCTTaGGCTCCAACTGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QARGQVTKDVPCPISHTLLKDKA*APTEAG
Trigger: CCCAGCCTCAGTTGGAGCCAAAGCTTTGTCCTTTAG...CAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp TTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCTCCAACCCAGATGCCCCTCCTTaGTGCTCCCACAGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRSIAILVLAKGQSFGSNPDAPP*CSHSAL
Trigger: GAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGG...GTTGGAGCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS CCA 90 bp ACTTTGCGCGGTGAGAACCAAATCCTGATATACATATGGCCTCCTTaGGGGTTAGAGGAGGGGTTTGCAGGGAGTTGTTGGTGTACAGGG +
Preference number: 5 (lower is better)
Translates to: TLRGENQILIYIWPP*GLEEGFAGSCWCTG
Trigger: CCCTGTACACCAACAACTCCCTGCAAACCCCTCCTCTAACCCCCAAGGAGGCCATATGTATATCAGGATTTGGTTCTCACCGCGCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS-3UTR CAA 90 bp TCCCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCACTGGTTTCATTGAGGTaGGGTCCTGACACCATCACC +
Preference number: 5 (lower is better)
Translates to: SPSLQWARIEERQRVLDALVSLR*GPDTIT
Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACCAG...TGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp CAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACAGGGCATGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: QHHWPRGVREELPLADRACITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...TGCCCTGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARGQVTKDVPCPISHTLGCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...CCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCAGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CQMPLLCAPTAPSVLLYPCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...AGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CGAGAAGAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: REELPLADRAFSGSVIGQKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...CTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTCTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGTGGCCAGCTGATAACAGTTGCTTaGTGCACTGTGGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: AVGCEVEGKDLGMKPCGQLITVA*CTVGMS
Trigger: ACTCATCCCCACAGTGCACAAAGCAACTGTTATCAG...CTGGCCACAGGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445086.6
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGATCGGTACCTTTCATGTaGAAAAATCCCCAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGSVPFM*KNPQWP
Trigger: GGGCCACTGGGGATTTTTCAACATGAAAGGTACCGA...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS TCA 90 bp GGCAAAAGGGAAATGGATGGACAACGCTGGGAGTTGCTTTTGGGCTaGGGAGAGTCCATGAGGTTCCTACAAGCAGAAGTTCCCAAGATC +
Preference number: 5 (lower is better)
Translates to: GKREMDGQRWELLLG*GESMRFLQAEVPKI
Trigger: GATCTTGGGAACTTCTGCTTGTAGGAACCTCATGGACTCTCCTCAGCCCAAAAGCAACTCCCAGCGTTGTCCATCCATTTCCCTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529847.1
ENST00000530410.1
CDS-3UTR CAA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CAA 90 bp ACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: TKDVPCPISHTLGLPFPMSVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...CATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGCTGACATTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RRNIIGPGESEKSCHWLTLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...TGTCAGCCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: SCHWLTGHFQALSLVREHFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...GTGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAGAGGGCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QRASDKGCTMSNLPHPGACLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...AGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GAGCTGCCATTGGCTGACAGGGCATTTTCAGGCTCTGTCATTGGTCAGGGAGCAAGATCCATAGCTATCTaGGTGCTGGCTAAAGGACAA +
Preference number: 5 (lower is better)
Translates to: ELPLADRAFSGSVIGQGARSIAI*VLAKGQ
Trigger: TTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCT...TGCTCCCTGACCAATGACAGAGCCTGAAAATGCCCTGTCAGCCAATGGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS GCA 90 bp CACATGAAATTGACTTCCCTGAAGGAGATGCTAGAGACAACTGGATaGTCCTGCTTACTAGGAGGAACTCGGACTTTGCGCGGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: HMKLTSLKEMLETTG*SCLLGGTRTLRGEN
Trigger: GTTCTCACCGCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAGCATCTCCTTCAGGGAAGTCAATTTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS-3UTR CAA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTCTGGTTTCATTGAGGTaGGGTCCTGACACCATCACC +
Preference number: 5 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSLVSLR*GPDTIT
Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACCAG...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CAA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKRTLSY*RFVSRS
Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCT...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000614314.4
CDS-3UTR CAA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLSVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ACTTCTCAGCTCCTTCTCCAGAGGGCAAAAGTCCTTAACCAGCCTGCAGTCTTCGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TSQLLLQRAKVLNQPAVFVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...GAAGACTGCAGGCTGGTTAAGGACTTTTGCCCTCTGGAGAAGGAGCTGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp GGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCGCAGCTTCTCATACTaGTCCCGATGGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GFVIAVGCEVEGKDLGMKRSFSY*SRWAWK
Trigger: TTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCG...CTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGATTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: MYHVQSPTPWGCPSQCLSFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...AGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GGTATTAGACGCAACATCATTGGCCCAGGGGAGTCCGAGAAGAGCTGCCATTGGTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GIRRNIIGPGESEKSCHWCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...CCAATGGCAGCTCTTCTCGGACTCCCCTGGGCCAATGATGTTGCGTCTAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTGATTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AFSGSVIGQGAHPSLKSDCLCIT*ILFSSR
Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...ATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGATGCCCCTCCTTTGTGCTCCCACAGCGCCCTCTGTACTTCTGTATCCTAATATTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RCPSFVLPQRPLYFCILIFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...TATTAGGATACAGAAGTACAGAGGGCGCTGTGGGAGCACAAAGGAGGGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp GCAAGTGACAAAGGATGTACCATGTCCAATCTCCCACACCCTGGGGCTGCCCTTATAGGGTTCTGGTGTTaGATTAGACTGAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: ASDKGCTMSNLPHPGAALIGFWC*IRLSLS
Trigger: AGACAAGCTCAGTCTAATCAAACACCAGAACCCTAT...AAGGGCAGCCCCAGGGTGTGGGAGATTGGACATGGTACATCCTTTGTCACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS TCA 90 bp TGGATGGACAACGCTGGGAGTTGCTTTTGGGCTGAGGAGAGTCCATaGGGTTCCTACAAGCAGAAGTTCCCAAGATCTCCAGACATAATT +
Preference number: 5 (lower is better)
Translates to: WMDNAGSCFWAEESP*GSYKQKFPRSPDII
Trigger: AATTATGTCTGGAGATCTTGGGAACTTCTGCTTGTAGGAACCTCATGGACTCTCCTCAGCCCAAAAGCAACTCCCAGCGTTGTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529847.1
ENST00000530410.1
CDS GCA 90 bp AAATTGACTTCCCTGAAGGAGATGCTAGAGACAACTGGATGCTCCTaGTTACTAGGAGGAACTCGGACTTTGCGCGGTGAGAACCAAATC +
Preference number: 5 (lower is better)
Translates to: KLTSLKEMLETTGCS*LLGGTRTLRGENQI
Trigger: GATTTGGTTCTCACCGCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAGCATCTCCTTCAGGGAAGTCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS-3UTR CAA 90 bp AATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCAACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: NVLMLETKKFTAPSSVSPTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...TGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp ATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTGTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ISHTLGLPFPMSFLIAKLCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...CAACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPKSSSC*CITLIL
Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AGATCCCAATCTTCTTGGGCTCTAAGCACAATTAAACTGGGTGGGTGGGTGAGGTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSQSSWALSTIKLGGWVRFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...CCTCACCCACCCACCCAGTTTAATTGTGCTTAGAGCCCAAGAAGATTGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000614314.4
CDS-3UTR CAA 90 bp CCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSGFVIAVGCEVEGKDLFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...CAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCAAAGCCCAGAAGACTGTCTGGGAGCTGCAGTATCCATGACAAAGGGCAAAGTTTCCCAATGTCTTTCTaGATAGCCAAGTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SKPRRLSGSCSIHDKGQSFPMSF*IAKLGW
Trigger: CCAGCCCAACTTGGCTATCAAGAAAGACATTGGGAA...ACTTTGCCCTTTGTCATGGATACTGCAGCTCCCAGACAGTCTTCTGGGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp TGTGACCTCTCCACAAGGTTCAGATTTAGGCTCAACACCTGGGTGCAGCAGGAGATAGGGTTCTGGTGTTaGATTAGACTGAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: CDLSTRFRFRLNTWVQQEIGFWC*IRLSLS
Trigger: AGACAAGCTCAGTCTAATCAAACACCAGAACCCTAT...CTCCTGCTGCACCCAGGTGTTGAGCCTAAATCTGAACCTTGTGGAGAGGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCATCATGCTTGCAGTTTaGGGCTGGGGCTACTATGCT +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPIMLAV*GWGYYA
Trigger: AGCATAGTAGCCCCAGCCCAAAACTGCAAGCATGAT...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp GTGCTCTTAAGATCCATAGCTATCTTGGTGCTGGCTAAAGGACAAAGCTTTGGCACAATGCTGGTTTCATaGAGGTTGGGTCCTGACACC +
Preference number: 5 (lower is better)
Translates to: VLLRSIAILVLAKGQSFGTMLVS*RLGPDT
Trigger: GGTGTCAGGACCCAACCTCAATGAAACCAGCATTGT...GCCAAAGCTTTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCTTAAGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254584.6
ENST00000614314.4
CDS-3UTR CAA 90 bp TGCCATTGGCCAGGGAGTGGTTTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGATTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: CHWPGSGFVIAVGCEVEGLMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...TCCTTCCACTTCACAGCCAACGGCTATGACAAAACCACTCCCTGGCCAATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GCATTTTCAGGCTCTGTCATTGGTCAGGGAGCACACCCCAGCCTGAAGAGTGATTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: AFSGSVIGQGAHPSLKSDLMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...ATCACTCTTCAGGCTGGGGTGTGCTCCCTGACCAATGACAGAGCCTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QWARIEERQRVLDATSLASVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCGTGTCTTCCATGGTCTaGGTGACCAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPVSSMV*VTNVLM
Trigger: CATCAACACATTGGTCACCAAGACCATGGAAGACAC...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCTTTTCTTCCAGGAACTaGAGCTTGATGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: QWARIEERQRVLDATSLAFSSRN*SLMATS
Trigger: AGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAA...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp AATCTCCCACACCCTGGGGCTGCCCTTCCCAATGTCTTTCTTGATAGCCAAGTTTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: NLPHPGAALPNVFLDSQVCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...AACTTGGCTATCAAGAAAGACATTGGGAAGGGCAGCCCCAGGGTGTGGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CCCTTCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: PFSAMGTHRGETKGIRRNCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...GTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS GCA 90 bp CAGCAGGAGTCAAGGATGGTGGGTCATGATAACAAGAAACCTGGTTaGATTCCCATGTGGAATCTTAGTGTGAGATTCAGGGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: QQESRMVGHDNKKPG*IPMWNLSVRFRAVC
Trigger: ACAAACAGCCCTGAATCTCACACTAAGATTCCACATGGGAATGCAACCAGGTTTCTTGTTATCATGACCCACCATCCTTGACTCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CCA 90 bp AACAGAAGAAAATACACTGAGTTTGGGGGCAGCAGGAGTCAAGGATaGTGGGTCATGATAACAAGAAACCTGGTTGCATTCCCATGTGGA +
Preference number: 5 (lower is better)
Translates to: NRRKYTEFGGSRSQG*WVMITRNLVAFPCG
Trigger: TCCACATGGGAATGCAACCAGGTTTCTTGTTATCATGACCCACCATCCTTGACTCCTGCTGCCCCCAAACTCAGTGTATTTTCTTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS-3UTR CAA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCAAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: SLQWARIEERQRVLDATSSVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPSVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGCATAGTAGCGTTTCCCCATTCTaGCATAGTAGTTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LETKKFTAPSSVSPFLHSSVSPF*HSSFCV
Trigger: GACACAGAAACTACTATGCAAGAATGGGGAAACGCT...ACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp GTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCAGCGTTTCCCCATTCTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: VLMLETKKFTAPSSVSPFLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...GAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp GCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: AMGTHRGETKGIRRNIIGLMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...GCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp CAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGCCTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: QWARIEERQRVLDATSLALMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...GGCCAATGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SLQWARIEERQRVLDATSLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TTTGTCATAGCCGTTGGCTGTGAAGTGGAAGGAAAAGATCTGGGAATGAAGCCCTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: FVIAVGCEVEGKDLGMKPCITLI*FSSRNL
Trigger: CAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...GGGCTTCATTCCCAGATCTTTTCCTTCCACTTCACAGCCAACGGCTATGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp TCTCTGCAATGGGCACGCATAGAGGAGAGACAAAGGGTATTAGACGCAACATCATTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: SLQWARIEERQRVLDATSLMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...TGATGTTGCGTCTAATACCCTTTGTCTCTCCTCTATGCGTGCCCATTGCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000531037.5
ENST00000614314.4
CDS-3UTR CAA 90 bp GTCTTGGTGACCAATGTGTTGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGCTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLVTNVLMLETKKFTAPSLMPHF*TMSNFS
Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...GCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525235.1
CDS-3UTR CAA 90 bp AATCCTGAAAAATTCTGGTTTCCTTGGCCAAAGGGCATACAGGTGATGACACCTAGATCCATAGCTATCTaGGTGCTGGCTAAAGGACAA +
Preference number: 5 (lower is better)
Translates to: NPEKFWFPWPKGIQVMTPRSIAI*VLAKGQ
Trigger: TTGTCCTTTAGCCAGCACCAAGATAGCTATGGATCT...AGGTGTCATCACCTGTATGCCCTTTGGCCAAGGAAACCAGAATTTTTCAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS-3UTR CAA 90 bp AGAGGACTACTTTTCTCAACTCTATACTTCTCCCATGCAGTCAAATTTCTGCTTTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RGLLFSTLYFSHAVKFLLLVTNV*MLETKK
Trigger: CTTCTTTGTCTCTAGCATCAACACATTGGTCACCAA...AAGCAGAAATTTGACTGCATGGGAGAAGTATAGAGTTGAGAAAAGTAGTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS GCA 72 bp CTGGGTCTGCAGCAGGCTGTAGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGACACTCTCATACTTGCG +
Preference number: 6 (lower is better)
Translates to: LGLQQAVEVGCQ*PAQLQDTLILA
Trigger: CGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTCTACAGCCTGCTGCAGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000614314.4
CDS TCA 72 bp GCCACCTCATCTCCAGGGCCAGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGACCCTGTGGGGATGAGT +
Preference number: 6 (lower is better)
Translates to: ATSSPGPEGVVL*DGWRPDPVGMS
Trigger: ACTCATCCCCACAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000525235.1
ENST00000531037.5
CDS CCA 72 bp CTCATCTCCAGGGCCAGAAGGAGTGGTGCTGTGAGATaGATGGCGGCCAGACCCTGTGGGGATGAGTCCATC +
Preference number: 6 (lower is better)
Translates to: LISRARRSGAVR*MAARPCGDESI
Trigger: GATGGACTCATCCCCACAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000525235.1
ENST00000531037.5
CDS CAA 90 bp AGGTGGGCTGTCAGTGCCCGGCCCAGCTGCAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: RWAVSARPSCRTLSY*RFVSRSNSICSSSS
Trigger: GGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000614314.4
CDS TCA 72 bp ACCAGACACAATGCTGGTTTCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAGGTCCTCGGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: TRHNAGFIEVGS*HHHLLEVLGPG
Trigger: GCCCGGCCCGAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423813.6
ENST00000445086.6
CDS CAA 72 bp GTCAGTGCCCGGCCCAGCTGCAGGACACTCTCATACTaGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VSARPSCRTLSY*RFVSRSNSICS
Trigger: GCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000614314.4
CDS TCA 72 bp GCCACCTCATCTCCAGGGCCAGAAGGAGTGGTGCTGTaGGATGGATGGCGGCCAGACCCTAAAGGATCAAGT +
Preference number: 6 (lower is better)
Translates to: ATSSPGPEGVVL*DGWRPDPKGSS
Trigger: ACTTGATCCTTTAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614314.4
CDS CCA 72 bp TCATCTTCAGGAAGCTGCCTGGCTTCGCCGTTCCCGTaGATAGGGATCTCCATTGTGGCTGCCTTCCCTAGG +
Preference number: 6 (lower is better)
Translates to: SSSGSCLASPFP*IGISIVAAFPR
Trigger: CCTAGGGAAGGCAGCCACAATGGAGATCCCTATCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000525235.1
ENST00000529847.1
ENST00000530410.1
ENST00000531037.5
ENST00000614314.4
CDS GCA 72 bp TTCCTCTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGGTCCACAGTCCGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: FLLRFVSRSNSI*SSSSRSTVREP
Trigger: AGGCTCACGGACTGTGGACCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGAGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531037.5
CDS TCA 72 bp AGCCCCCATAGCCACCAGACACAATGCTGGTTTCATTaGGGTTGGGTCCTGACACCATCACCTGCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: SPHSHQTQCWFH*GWVLTPSPAGG
Trigger: ACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000525235.1
ENST00000529847.1
ENST00000530410.1
ENST00000531037.5
ENST00000614314.4
CDS GCA 72 bp TCCCTGAAGGAGATGCTAGAGACAACTGGATGCTCCTaGTTACTAGGAGGAACTCGGACTTTGCGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: SLKEMLETTGCS*LLGGTRTLRGE
Trigger: CTCACCGCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAGCATCTCCTTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS TCA 72 bp GTCTCTGGTAAAAGCCTCTCTCTCCCAGGATATCGGTaGCCCTTCCACAGTCAGTTATGTCTCCCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: VSGKSLSLPGYR*PFHSQLCLPGV
Trigger: CACACCTGGGAGACATAACTGACTGTGGAAGGGTCACCGATATCCTGGGAGAGAGAGGCTTTTACCAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525329.1
CDS CCA 72 bp ACTTTGCGCGGTGAGAACCAAATCCTGATATACATATaGCCTCCTTGGGGGTTAGAGGAGGGGTTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: TLRGENQILIYI*PPWGLEEGFAG
Trigger: CCCTGCAAACCCCTCCTCTAACCCCCAAGGAGGCCATATGTATATCAGGATTTGGTTCTCACCGCGCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS GCA 72 bp TTGACTTCCCTGAAGGAGATGCTAGAGACAACTGGATaGTCCTGCTTACTAGGAGGAACTCGGACTTTGCGC +
Preference number: 6 (lower is better)
Translates to: LTSLKEMLETTG*SCLLGGTRTLR
Trigger: GCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAGCATCTCCTTCAGGGAAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CCA 72 bp GGTGAGAACCAAATCCTGATATACATATGGCCTCCTTaGGGGTTAGAGGAGGGGTTTGCAGGGAGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: GENQILIYIWPP*GLEEGFAGSCW
Trigger: CCAACAACTCCCTGCAAACCCCTCCTCTAACCCCCAAGGAGGCCATATGTATATCAGGATTTGGTTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CAA 90 bp CTAGAGACAACTGGATGCTCCTGCTTACTAGGAGGAACTCGGACTTaGCGCGGTGAGAACCAAATCCTGATATACATATGGCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: LETTGCSCLLGGTRT*RGENQILIYIWPPW
Trigger: CCAAGGAGGCCATATGTATATCAGGATTTGGTTCTCACCGCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS TCA 72 bp GAAATGGATGGACAACGCTGGGAGTTGCTTTTGGGCTaGGGAGAGTCCATGAGGTTCCTACAAGCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: EMDGQRWELLLG*GESMRFLQAEV
Trigger: AACTTCTGCTTGTAGGAACCTCATGGACTCTCCTCAGCCCAAAAGCAACTCCCAGCGTTGTCCATCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529847.1
ENST00000530410.1
CDS CAA 72 bp GTGGCCCCACCCATACTTCTCTTCGAGCACATGAAATaGACTTCCCTGAAGGAGATGCTAGAGACAACTGGA +
Preference number: 6 (lower is better)
Translates to: VAPPILLFEHMK*TSLKEMLETTG
Trigger: TCCAGTTGTCTCTAGCATCTCCTTCAGGGAAGTCAATTTCATGTGCTCGAAGAGAAGTATGGGTGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CAA 72 bp ATGAGCGTGTCTTCCATGGTCTTGGTGACCAATGTGTaGATGCTAGAGACAAAGAAGTTCACGGCTCCTAGC +
Preference number: 6 (lower is better)
Translates to: MSVSSMVLVTNV*MLETKKFTAPS
Trigger: GCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGAAGACACGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254584.6
ENST00000396777.8
ENST00000423813.6
ENST00000445086.6
ENST00000531037.5
ENST00000614314.4
CDS CAA 72 bp ACTGGATGCTCCTGCTTACTAGGAGGAACTCGGACTTaGCGCGGTGAGAACCAAATCCTGATATACATATGG +
Preference number: 6 (lower is better)
Translates to: TGCSCLLGGTRT*RGENQILIYIW
Trigger: CCATATGTATATCAGGATTTGGTTCTCACCGCGCAAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CCA 72 bp AAATACACTGAGTTTGGGGGCAGCAGGAGTCAAGGATaGTGGGTCATGATAACAAGAAACCTGGTTGCATTC +
Preference number: 6 (lower is better)
Translates to: KYTEFGGSRSQG*WVMITRNLVAF
Trigger: GAATGCAACCAGGTTTCTTGTTATCATGACCCACCATCCTTGACTCCTGCTGCCCCCAAACTCAGTGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CCA 72 bp GAAATTGACTTCCCTGAAGGAGATGCTAGAGACAACTaGATGCTCCTGCTTACTAGGAGGAACTCGGACTTT +
Preference number: 6 (lower is better)
Translates to: EIDFPEGDARDN*MLLLTRRNSDF
Trigger: AAAGTCCGAGTTCCTCCTAGTAAGCAGGAGCATCCAGTTGTCTCTAGCATCTCCTTCAGGGAAGTCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1
CDS CAA 90 bp AGAGAAGAGGGGTTGCTTCAGGAACATAGGGGCTGCAGAAGCATTTaGGAGGTGGGAACAAGTTTGGATTCAAGCATCATAAAGATAGTA +
Preference number: 6 (lower is better)
Translates to: REEGLLQEHRGCRSI*EVGTSLDSSIIKIV
Trigger: TACTATCTTTATGATGCTTGAATCCAAACTTGTTCCCACCTCCAAAATGCTTCTGCAGCCCCTATGTTCCTGAAGCAACCCCTCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529847.1
CDS TCA 72 bp AGAAACCTGGTTGCATTCCCATGTGGAATCTTAGTGTaGGATTCAGGGCTGTTTGTTCCTCTAAACTTTAGA +
Preference number: 6 (lower is better)
Translates to: RNLVAFPCGILV*DSGLFVPLNFR
Trigger: TCTAAAGTTTAGAGGAACAAACAGCCCTGAATCTCACACTAAGATTCCACATGGGAATGCAACCAGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530410.1