RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFGEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000066777

Ensembl transcript IDs: ENST00000262215.8, ENST00000517955.2, ENST00000518230.5, ENST00000518290.1, ENST00000518789.5, ENST00000519436.1, ENST00000520381.5, ENST00000522878.5

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACCATCTGCTTGGATATACCTGCACGTAGTCTGTGTTCTGGGTaGCATCCTGGCAGGGCTAGGACAGGTAGAGATGGACAATGCAAC +
Preference number: 1 (lower is better)
Translates to: VTICLDIPARSLCSG*HPGRARTGRDGQCN
Trigger: GTTGCATTGTCCATCTCTACCTGTCCTAGCCCTGCCAGGATGCCACCCAGAACACAGACTACGTGCAGGTATATCCAAGCAGATGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR GCA 90 bp TCTGGGTGGCATCCTGGCAGGGCTAGGACAGGTAGAGATGGACAATaGAACATCCACTGCTTGTTCTGGGGTATTCCTTATGTTGGTAAG +
Preference number: 1 (lower is better)
Translates to: SGWHPGRARTGRDGQ*NIHCLFWGIPYVGK
Trigger: CTTACCAACATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACCTGTCCTAGCCCTGCCAGGATGCCACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR GCA 90 bp ATTACAGTGTCTCATGGCTGCCTTAGTCATAGCCATGTGACCATCTaGTTGGATATACCTGCACGTAGTCTGTGTTCTGGGTGGCATCCT +
Preference number: 1 (lower is better)
Translates to: ITVSHGCLSHSHVTI*LDIPARSLCSGWHP
Trigger: AGGATGCCACCCAGAACACAGACTACGTGCAGGTATATCCAAGCAGATGGTCACATGGCTATGACTAAGGCAGCCATGAGACACTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR TCA 90 bp CGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATaGGGCCAATATAACACACAAAATCCACCAGCACTAAAAGGGACT +
Preference number: 1 (lower is better)
Translates to: REHELTLFKQAFCST*GQYNTQNPPALKGT
Trigger: AGTCCCTTTTAGTGCTGGTGGATTTTGTGTGTTATATTGGCCTCATGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR CCA 90 bp GCTAGGACAGGTAGAGATGGACAATGCAACATCCACTGCTTGTTCTaGGGTATTCCTTATGTTGGTAAGTTTGTGAAAAGACACTTATTA +
Preference number: 1 (lower is better)
Translates to: ARTGRDGQCNIHCLF*GIPYVGKFVKRHLL
Trigger: TAATAAGTGTCTTTTCACAAACTTACCAACATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACCTGTCCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR TCA 90 bp GCCAGGCATTGTGTTAACCCAGTGGGTCTCATGAGGAGTTTGGTCTaGAGTCAAAACTGTTTGTATTATAAACTAAGACATTATTTGTCT +
Preference number: 1 (lower is better)
Translates to: ARHCVNPVGLMRSLV*SQNCLYYKLRHYLS
Trigger: AGACAAATAATGTCTTAGTTTATAATACAAACAGTTTTGACTTCAGACCAAACTCCTCATGAGACCCACTGGGTTAACACAATGCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGGCAGAGCTGGCAGTaGGCCAAGACCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLRQSWQ*AKTVPL
Trigger: CAGTGGCACGGTCTTGGCTCACTGCCAGCTCTGCCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR CAA 90 bp ACAGTGTCTCATGGCTGCCTTAGTCATAGCCATGTGACCATCTGCTaGGATATACCTGCACGTAGTCTGTGTTCTGGGTGGCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: TVSHGCLSHSHVTIC*DIPARSLCSGWHPG
Trigger: GCCAGGATGCCACCCAGAACACAGACTACGTGCAGGTATATCCAAGCAGATGGTCACATGGCTATGACTAAGGCAGCCATGAGACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGAGTACAAGGCCATaGGGTGGTTGGACAGCAGTT +
Preference number: 2 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLQSTRP*GGWTAV
Trigger: AACTGCTGTCCAACCACCTCATGGCCTTGTACTCTG...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGAAAGGGGGAGATTCCTaGGGTCATAATGGGAACTTG +
Preference number: 2 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLKGGDS*GHNGNL
Trigger: CAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR CAA 90 bp GGCAGGGCTAGGACAGGTAGAGATGGACAATGCAACATCCACTGCTaGTTCTGGGGTATTCCTTATGTTGGTAAGTTTGTGAAAAGACAC +
Preference number: 2 (lower is better)
Translates to: GRARTGRDGQCNIHC*FWGIPYVGKFVKRH
Trigger: GTGTCTTTTCACAAACTTACCAACATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACCTGTCCTAGCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTTTAGAGATCAGCCGTaGTTACAGTGTCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLFRDQP*LQCLMA
Trigger: AGCCATGAGACACTGTAATCACGGCTGATCTCTAAA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAAGCACTAAAAGGGACTaGAGTGTTGCAAGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: GRTREHELTLFKQAFCSTSTKRD*SVASLS
Trigger: ACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGGCAGGAGAATGGCATaGACCCAGGAGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLGRRMA*TQEAEL
Trigger: CAGCTCTGCCTCCTGGGTTCATGCCATTCTCCTGCC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTTACAAGGCCATGAGGTaGTTGGACAGCAGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAYKAMR*LDSSFQ
Trigger: TTGAAAACTGCTGTCCAACCACCTCATGGCCTTGTA...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCCCGTGAGCATGAGCTaGCACTGTTTAAACAGGCTT +
Preference number: 2 (lower is better)
Translates to: RPASLYIFHRMITSISDSPVSMS*HCLNRL
Trigger: AAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGGTAGAGATGGACAATaGAACATCCACTGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPGRDGQ*NIHCLF
Trigger: GAACAAGCAGTGGATGTTGCATTGTCCATCTCTACC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGCTTTCTGCTCAACATaGGGCCAATATAACACACAA +
Preference number: 2 (lower is better)
Translates to: RPASLYIFHRMITSISDSAFCST*GQYNTQ
Trigger: TTGTGTGTTATATTGGCCTCATGTTGAGCAGAAAGC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTTAGTCATAGCCATGTaGCCATCTGCTTGGATATAC +
Preference number: 2 (lower is better)
Translates to: VCVTYISKALWGPQFLRVLVIAM*PSAWIY
Trigger: GTATATCCAAGCAGATGGTCACATGGCTATGACTAA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAGCCATGTGACCATCTaGTTGGATATACCTGCACGT +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSHVTI*LDIPAR
Trigger: ACGTGCAGGTATATCCAAGCAGATGGTCACATGGCT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTACAGTGTCTCATGGCTaGCTTAGTCATAGCCATGTG +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLTVSHG*LSHSHV
Trigger: CACATGGCTATGACTAAGGCAGCCATGAGACACTGT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGATCCACTGCTTGTTCTaGGGTATTCCTTATGTTGGT +
Preference number: 2 (lower is better)
Translates to: VCVTYISKALWGPQFLRVIHCLF*GIPYVG
Trigger: ACCAACATAAGGAATACCCCAGAACAAGCAGTGGAT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGTATCTCAGATAGCCTaGGTGTGCAAAAATCTTCAG +
Preference number: 2 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSVSQIA*VCKNLQ
Trigger: CTGAAGATTTTTGCACACTCAGGCTATCTGAGATAC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCAATGCAACATCCACTaGTTGTTCTGGGGTATTCCT +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLQCNIH*LFWGIP
Trigger: AGGAATACCCCAGAACAAGCAGTGGATGTTGCATTG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGGAGTGTTGCAAGTTTaGGTAAGACTTCTAAGCATC +
Preference number: 2 (lower is better)
Translates to: HFILQNTALLSCTSCRSSGVLQV*VRLLSI
Trigger: GATGCTTAGAAGTCTTACTCAAACTTGCAACACTCC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR TCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCCTAAGAGAAATATGTaGCAGGTAGTTACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSPKRNM*QVVTVS
Trigger: ACTGACAGTAACTACCTGTCACATATTTCTCTTAGG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTGTGTTACTACATCTTaGCCTCATTCACCCATGACT +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLCVTTS*PHSPMT
Trigger: AGTCATGGGTGAATGAGGGCAAGATGTAGTAACACA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAAACACGAGTTGATCTaGAATTTATGTACCTGGATC +
Preference number: 2 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLKHELI*NLCTWI
Trigger: GATCCAGGTACATAAATTTCAGATCAACTCGTGTTT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR CCA 72 bp TGCTTGGATATACCTGCACGTAGTCTGTGTTCTGGGTaGCATCCTGGCAGGGCTAGGACAGGTAGAGATGGA +
Preference number: 3 (lower is better)
Translates to: CLDIPARSLCSG*HPGRARTGRDG
Trigger: TCCATCTCTACCTGTCCTAGCCCTGCCAGGATGCCACCCAGAACACAGACTACGTGCAGGTATATCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR GCA 72 bp CATCCTGGCAGGGCTAGGACAGGTAGAGATGGACAATaGAACATCCACTGCTTGTTCTGGGGTATTCCTTAT +
Preference number: 3 (lower is better)
Translates to: HPGRARTGRDGQ*NIHCLFWGIPY
Trigger: ATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACCTGTCCTAGCCCTGCCAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR GCA 72 bp TCTCATGGCTGCCTTAGTCATAGCCATGTGACCATCTaGTTGGATATACCTGCACGTAGTCTGTGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: SHGCLSHSHVTI*LDIPARSLCSG
Trigger: CCCAGAACACAGACTACGTGCAGGTATATCCAAGCAGATGGTCACATGGCTATGACTAAGGCAGCCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGAACCAGATGTAGTCTaGAGTAGTAGGCAGAGTACA +
Preference number: 3 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLEPDVV*SSRQST
Trigger: TGTACTCTGCCTACTACTCAAGACTACATCTGGTTC...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR TCA 72 bp TTACAGTGTCTCATGGCTGCCTTAGTCATAGCCATGTaGCCATCTGCTTGGATATACCTGCACGTAGTCTGT +
Preference number: 3 (lower is better)
Translates to: LQCLMAALVIAM*PSAWIYLHVVC
Trigger: ACAGACTACGTGCAGGTATATCCAAGCAGATGGTCACATGGCTATGACTAAGGCAGCCATGAGACACTGTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGAAGGCCATGAGGTGGTaGGACAGCAGTTTTCAAAAT +
Preference number: 3 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQKAMRW*DSSFQN
Trigger: ATTTTGAAAACTGCTGTCCAACCACCTCATGGCCTT...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR TCA 72 bp GAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATaGGGCCAATATAACACACAAAATCCACCAGCACTA +
Preference number: 3 (lower is better)
Translates to: ELTLFKQAFCST*GQYNTQNPPAL
Trigger: TAGTGCTGGTGGATTTTGTGTGTTATATTGGCCTCATGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR TCA 72 bp TATCTGCCAGGCATTGTGTTAACCCAGTGGGTCTCATaGGGAGTTTGGTCTGAAGTCAAAACTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: YLPGIVLTQWVS*GVWSEVKTVCI
Trigger: AATACAAACAGTTTTGACTTCAGACCAAACTCCTCATGAGACCCACTGGGTTAACACAATGCCTGGCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR TCA 72 bp TTTTTCACGTTTCCAGTATATTTTAGAGATCAGCCGTaGTTACAGTGTCTCATGGCTGCCTTAGTCATAGCC +
Preference number: 3 (lower is better)
Translates to: FFTFPVYFRDQP*LQCLMAALVIA
Trigger: GGCTATGACTAAGGCAGCCATGAGACACTGTAATCACGGCTGATCTCTAAAATATACTGGAAACGTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR CCA 72 bp GGTAGAGATGGACAATGCAACATCCACTGCTTGTTCTaGGGTATTCCTTATGTTGGTAAGTTTGTGAAAAGA +
Preference number: 3 (lower is better)
Translates to: GRDGQCNIHCLF*GIPYVGKFVKR
Trigger: TCTTTTCACAAACTTACCAACATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCATGTGACCATCTGCTaGGATATACCTGCACGTAGT +
Preference number: 3 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLHVTIC*DIPARS
Trigger: ACTACGTGCAGGTATATCCAAGCAGATGGTCACATG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTGCAACATCCACTGCTaGTTCTGGGGTATTCCTTAT +
Preference number: 3 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLCNIHC*FWGIPY
Trigger: ATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTCATTCACCCATGACTaGGTGGTTGGTATTGTTTTT +
Preference number: 3 (lower is better)
Translates to: VCVTYISKALWGPQFLRVSFTHD*VVGIVF
Trigger: AAAAACAATACCAACCACCAAGTCATGGGTGAATGA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTGGAGTGTTGCAAGTTaGAGTAAGACTTCTAAGCAT +
Preference number: 3 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSWSVAS*SKTSKH
Trigger: ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR CCA 72 bp TCTTGTAGAAGTTCAATCTTTACATCTATAGTTCTTTaGGTAAGTTTCACTTCCACACCTGCCAAAAACGTG +
Preference number: 3 (lower is better)
Translates to: SCRSSIFTSIVL*VSFTSTPAKNV
Trigger: CACGTTTTTGGCAGGTGTGGAAGTGAAACTTACCCAAAGAACTATAGATGTAAAGATTGAACTTCTACAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAGCCCGGGCGGCTGTCTaGCGGGAACTGAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTARAAV*RELRDE
Trigger: CTCGTCCCTCAGTTCCCGGCAGACAGCCGCCCGGGC...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGTGGAGGTGGGGGATTaGAGGCGTGGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAVEVGD*RRGGQR
Trigger: CCGCTGCCCTCCACGCCTCCAATCCCCCACCTCCAC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGCTTGCACGGCGGCTCTaGGACCCCGCATCCCAATGC +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKLARRL*DPASQC
Trigger: GCATTGGGATGCGGGGTCCCAGAGCCGCCGTGCAAG...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGCCCACAGGCCAGGCTaGTGGTCTCCTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKAHRPG*WSPASE
Trigger: TTCTGAAGCAGGAGACCAGCAGCCTGGCCTGTGGGC...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGACATCCGGAAGAGAATaGGCAGCCCACAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKTSGRE*AAHRPG
Trigger: GCCTGGCCTGTGGGCTGCGCATTCTCTTCCGGATGT...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGATCTCTGAGAGCTCTTaGACGGCGGCTCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKISESS*TAALGP
Trigger: GGGTCCCAGAGCCGCCGTGCAAGAGCTCTCAGAGAT...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGCCACTGGTGGCTTTaGACAAGCAGCAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKGHWWL*TSSSAA
Trigger: GGCTGCACTGCTGCTTGTGCAAAGCCACCAGTGGCC...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAAGGCTGCTGGTCTCCTaGTTCAGAAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTRLLVS*FRRLGL
Trigger: CAAGCCCAACCTTCTGAAGCAGGAGACCAGCAGCCT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCTTGTAAAGGGTGCCTaGACATGGCTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLLVKGA*TWLTAS
Trigger: GGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCAGCCTGGGCACTGCTTaGTTCATCTCTGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFSLGTA*FISESS
Trigger: AGAGCTCTCAGAGATGAATCAAGCAGTGCCCAGGCT...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCCAGAGTACAAGGCCATaGGGTGGTTGGACAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFQSTRP*GGWTAV
Trigger: AACTGCTGTCCAACCACCTCATGGCCTTGTACTCTG...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACATTCAAAAGCCTCTGCTaGACCTCCTCCCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTFKSLC*TSSQAL
Trigger: TAGTGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAA...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTCTGTCTGCCGGGAACTaGGGGACGAGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSLSAGN*GTRWRR
Trigger: CCGCCGCCACCTCGTCCCTCAGTTCCCGGCAGACAG...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGGTGATTCAGGCTCGTaGTGGCTTACTGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAGDSGS*WLTGDC
Trigger: ACAGTCTCCAGTAAGCCATCACGAGCCTGAATCACC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCTGTGCCAGCTCCAACTaGCTGATGCACTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGCASSN*LMHFRI
Trigger: GATTCTGAAGTGCATCAGTCAGTTGGAGCTGGCACA...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCGCTTGGATTTGCCTTTaGATCCTGCTTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFAWICL*ILLSTG
Trigger: CCCTGTGGAAAGCAGGATTCAAAGGCAAATCCAAGC...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGAGAAAAGCAAGGACTaGGGAAGATACAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTEKSKD*GRYSKA
Trigger: GGCCTTGCTGTATCTTCCTCAGTCCTTGCTTTTCTC...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTCCATCACCGCCGACCTaGCCCGGCCGCCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSPSPPT*PGRHVG
Trigger: CCCAACATGGCGGCCGGGGCAGGTCGGCGGTGATGG...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACACCAGATCGCGCTAACTaGTCATTGTCTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTPDRAN*SLSCCT
Trigger: TGTGCAGCAAGACAATGAGCAGTTAGCGCGATCTGG...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGGCTGCTGGTCTCCTaGTTCAGAAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLRLLVS*FRRLGL
Trigger: CAAGCCCAACCTTCTGAAGCAGGAGACCAGCAGCCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAACATTCAAAAGCCTCTaGTGGACCTCCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPTFKSL*WTSSQA
Trigger: TGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAATGT...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGGGGGATTGGAGGCGTaGAGGGCAGCGGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSGGLEA*RAAAGS
Trigger: TGATCCTGCCGCTGCCCTCCACGCCTCCAATCCCCC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGCGGCTCCCAGCGGCTaGAGGGGAGGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSAAPSG*RGGGGE
Trigger: CTCTCCTCCTCCTCCCCTCCAGCCGCTGGGAGCCGC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACACATCCCAATGCGAATTaGGCTAGAAATGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTHPNAN*ARNVGL
Trigger: CAGCCCCACATTTCTAGCCCAATTCGCATTGGGATG...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAGCAGCAGTGCAGCCTaGGCACTGCTTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPSSSAA*ALLDSS
Trigger: AGATGAATCAAGCAGTGCCCAGGCTGCACTGCTGCT...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
3UTR CAA 72 bp CATGGCTGCCTTAGTCATAGCCATGTGACCATCTGCTaGGATATACCTGCACGTAGTCTGTGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HGCLSHSHVTIC*DIPARSLCSGW
Trigger: CCACCCAGAACACAGACTACGTGCAGGTATATCCAAGCAGATGGTCACATGGCTATGACTAAGGCAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATCAGCTGCAGTTGCCTaGTCAGCTTCAGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTSAAVA*SASVCS
Trigger: TGAACAGACTGAAGCTGATCAGGCAACTGCAGCTGA...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCTTGTAGACCCACACTaGATGCAGCCAGAAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLLVDPH*MQPEKA
Trigger: CGCCTTTTCTGGCTGCATTCAGTGTGGGTCTACAAG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCTGTGCCAGCTCCAACTaGCTGATGCACTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNACASSN*LMHFRI
Trigger: GATTCTGAAGTGCATCAGTCAGTTGGAGCTGGCACA...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAGCTTGGATTTGCCTTTaGATCCTGCTTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTAWICL*ILLSTG
Trigger: CCCTGTGGAAAGCAGGATTCAAAGGCAAATCCAAGC...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCGTCCAGGCTTCTCGATaGCTTTCTGATGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGVQASR*LSDVRV
Trigger: CACTCTAACATCAGAAAGTCATCGAGAAGCCTGGAC...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCCCCGTGAGCATGAGCTaGCACTGTTTAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAPVSMS*HCLNRL
Trigger: AAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGG...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGTGCTTGATTCATCTCTaGGAGCTCTTGCACGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQCLIHL*ELLHGG
Trigger: GCCGCCGTGCAAGAGCTCTCAGAGATGAATCAAGCA...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGACAAGGGTGACAATGTaGCCGGTTGTTTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKTRVTM*PVVWNA
Trigger: TGCATTCCAAACAACCGGGCACATTGTCACCCTTGT...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCACGCAGAAACCAGTGGTaGTTGTGGTCTGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPRRNQW*LWSVIH
Trigger: GTGGATAACAGACCACAAGCACCACTGGTTTCTGCG...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTACATCCGGAAGAGAATaGGCAGCCCACAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTTSGRE*AAHRPG
Trigger: GCCTGGCCTGTGGGCTGCGCATTCTCTTCCGGATGT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGACATTCAAAAGCCTCTaGTGGACCTCCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLTFKSL*WTSSQA
Trigger: TGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAATGT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTACCCTGGCTACTGTaGGGATTAGCACCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSLPWLL*GLAPAA
Trigger: CGCGGCGGGTGCTAATCCCCACAGTAGCCAGGGTAG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGTTTCTCCAGAATTaGGTCGCCAGGTCAACAGCG +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLQFLQN*VARSTA
Trigger: CGCTGTTGACCTGGCGACCCAATTCTGGAGAAACTG...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCAACCAGTGGTGCTTGTaGTCTGTTATCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFNQWCL*SVIHRP
Trigger: AGGTCTGTGGATAACAGACCACAAGCACCACTGGTT...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCAGACGCAGAAACCAGTaGTGCTTGTGGTCTGTTATC +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGRRRNQ*CLWSVI
Trigger: GATAACAGACCACAAGCACCACTGGTTTCTGCGTCT...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTTCAAAAGCCTCTGCTaGACCTCCTCCCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLFKSLC*TSSQAL
Trigger: TAGTGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCAAAGGGGGAGATTCCTaGGGTCATAATGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGKGGDS*GHNGNL
Trigger: CAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTT...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGCATCCTCCTTTCACTaGCAGCCCCATGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPASSFH*QPHAHR
Trigger: CCTGTGAGCATGGGGCTGCCAGTGAAAGGAGGATGC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTCTGAGGGTTTTTCCTaGCCAAGAGTTGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSEGFS*PRVVWE
Trigger: CTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAACTCATCTCTTGCTCTaGGGGTTTTTCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTTHLLL*GFFLTK
Trigger: CTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGCATCTCTCTCCAGCTaGATGCTGAAAATGCATGCA +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAASLSS*MLKMHA
Trigger: TGCATGCATTTTCAGCATTCAGCTGGAGAGAGATGC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCGTGGGATTGTGGTTTTaGAGATATCCAGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGVGLWF*RYPVCS
Trigger: ACTGCACACTGGATATCTTCAAAACCACAATCCCAC...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCCCCGGTTGTTTGGAATaGAAGTTCCACTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFPGCLE*KFHYAF
Trigger: GAAAGCATAGTGGAACTTGCATTCCAAACAACCGGG...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACATGTGTCTGGGAAAGCTaGATTGCACGCAAATTCAGA +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTCVWES*IARKFR
Trigger: TCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACA...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCACACCCTGTCTTCAGGTaGTACGTTCATATCATCGCT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPHPVFR*YVHIIA
Trigger: AGCGATGATATGAACGTAGCACCTGAAGACAGGGTG...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCCTATGCGAGGACATTTaGACTGGCATGCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNALCEDI*TGMPTQ
Trigger: TTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAG...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACACACTTCACTGCATCCTaGAAAGAATCAATGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTHFTAS*KESMVA
Trigger: AGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTG...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCAACCAGTGGTGCTTGTaGTCTGTTATCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNANQWCL*SVIHRP
Trigger: AGGTCTGTGGATAACAGACCACAAGCACCACTGGTT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCAGACGCAGAAACCAGTaGTGCTTGTGGTCTGTTATC +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNARRRNQ*CLWSVI
Trigger: GATAACAGACCACAAGCACCACTGGTTTCTGCGTCT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCCTAGAAATGTGGGGCTaGATTCGAAGCCTCATACTT +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGLEMWG*IRSLIL
Trigger: AAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAG...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTATACAGCAAGGCCACTaGTGGCTTTGCACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAIQQGH*WLCTSS
Trigger: GCTGCTTGTGCAAAGCCACCAGTGGCCTTGCTGTAT...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCTACAAGGCCATGAGGTaGTTGGACAGCAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFYKAMR*LDSSFQ
Trigger: TTGAAAACTGCTGTCCAACCACCTCATGGCCTTGTA...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAATATCTAAGTTGAGGTaGTTCAGGCTCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTISKLR*FRLVMA
Trigger: AGCCATCACGAGCCTGAATCACCTCAACTTAGATAT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTTGTAAAGGGTGCCTaGACATGGCTCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSLVKGA*TWLTAS
Trigger: GGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGCATCTCTCTCCAGCTaGATGCTGAAAATGCATGCA +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLASLSS*MLKMHA
Trigger: TGCATGCATTTTCAGCATTCAGCTGGAGAGAGATGC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCCGAATGTTAGCAGCTTaGGAATTAACCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFRMLAA*ELTICA
Trigger: AGCACAGATGGTTAATTCTCAAGCTGCTAACATTCG...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCGCTTGTGTATTCCTTaGAAGCCTGAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLRLCIP*KPEVYQ
Trigger: CTGATAGACCTCAGGCTTTCAAGGAATACACAAGCG...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGCACTTGTAAAGGGTaGCTGAACATGGCTCACGGC +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPCTCKG*LNMAHG
Trigger: GCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAGTTCCTATAAGCTGTaGCAGCTCCAACTGACTGAT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPSSYKL*QLQLTD
Trigger: ATCAGTCAGTTGGAGCTGGCACAGCTTATAGGAACT...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGACAAGGGTGACAATGTaGCCGGTTGTTTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLTRVTM*PVVWNA
Trigger: TGCATTCCAAACAACCGGGCACATTGTCACCCTTGT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACACTGGGAAAGCTGCATTaGACGCAAATTCAGACAAAC +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTLGKLH*TQIQTN
Trigger: GTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAG...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGGCCCACAGGCCAGGCTaGTGGTCTCCTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVAHRPG*WSPASE
Trigger: TTCTGAAGCAGGAGACCAGCAGCCTGGCCTGTGGGC...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGACATCCGGAAGAGAATaGGCAGCCCACAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVTSGRE*AAHRPG
Trigger: GCCTGGCCTGTGGGCTGCGCATTCTCTTCCGGATGT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGCCATGTGACCATCTaGTTGGATATACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSHVTI*LDIPAR
Trigger: ACGTGCAGGTATATCCAAGCAGATGGTCACATGGCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACACAACACTCTGAGAACTaGTTTCTCCAATGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTQHSEN*FLQWIP
Trigger: AGGAATCCATTGGAGAAACCAGTTCTCAGAGTGTTG...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCGGACAAAATCCACAATaGCATTTCCATCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGGQNPQ*HFHLAL
Trigger: CAAGGCTAGATGGAAATGCCATTGTGGATTTTGTCC...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAACCAGTGGTGCTTGTaGTCTGTTATCCACAGACCT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLNQWCL*SVIHRP
Trigger: AGGTCTGTGGATAACAGACCACAAGCACCACTGGTT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAATGTTGTCGATAGTCTaGATGAGTTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTMLSIV*MSSSCT
Trigger: TGTGCAGCTGGAACTCATCCAGACTATCGACAACAT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGATTGGGCTAGAAATGTaGGGCTGGATTCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQIGLEM*GWIRSL
Trigger: GAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAAT...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTCCAGCTCCAACTGACTaGTGCACTTCAGAATCTCAT +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAPAPTD*CTSESH
Trigger: ATGAGATTCTGAAGTGCATCAGTCAGTTGGAGCTGG...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAAATTCATCAGGAGCCTaGTCTTTTGTTCCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTNSSGA*SFVPVR
Trigger: TCTTACTGGAACAAAAGATCAGGCTCCTGATGAATT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCATACATTCCTTGGTCTTaGGTATCAACGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPYIPWS*VSTRTS
Trigger: TGATGTTCGCGTTGATACTCAAGACCAAGGAATGTA...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGCTTGGATTTGCCTTTaGATCCTGCTTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPAWICL*ILLSTG
Trigger: CCCTGTGGAAAGCAGGATTCAAAGGCAAATCCAAGC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAGTTGCCATCTGCACTTaGATTTATAGTAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTVAICT*IYSSPF
Trigger: GAAGGGACTACTATAAATGCAAGTGCAGATGGCAAC...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCTACCAAGTTCTTGACTaGCCCTTCCTTGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAYQVLD*PFLEQF
Trigger: AAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTA...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATCTGTGTACTGTAGCTaGCTATTCCTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTSVYCS*LFLMMM
Trigger: CATCATCATCAGGAATAGGCAGCTACAGTACACAGA...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTATCTTCAGGTGTGGTaGCAAGCATCCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLYLQVW*QASLVL
Trigger: AAGAACAAGGGATGCTTGGCACCACACCTGAAGATA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGAGTTTGTCCTTGGTTaGATTCTAGGTATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAEFVLG*ILGILQ
Trigger: CTGCAAGATACCTAGAATGCAACCAAGGACAAACTC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAACATGGGCCTCACATaGTCCAAATGTGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLNMGLT*SKCVAL
Trigger: AAGTGCAACACATTTGGAGCATGTGAGGCCCATGTT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGTTCCTATAAGCTGTaGCAGCTCCAACTGACTGAT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSSYKL*QLQLTD
Trigger: ATCAGTCAGTTGGAGCTGGCACAGCTTATAGGAACT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAGGATTCCTGAATACTTaGTATCTGTTTCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPGFLNT*YLFPVH
Trigger: GTGGACTGGAAACAGATAGCAAGTATTCAGGAATCC...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCTGGGAAAGCTGCATTaGACGCAAATTCAGACAAAC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLLGKLH*TQIQTN
Trigger: GTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAGCGAATAAGTCGAATTaGTTCCATACTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPANKSN*FHTCVW
Trigger: CCAGACACAAGTATGGAAGCAATTCGACTTATTCGC...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCCAGATCGCGCTAACTaGTCATTGTCTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPPDRAN*SLSCCT
Trigger: TGTGCAGCAAGACAATGAGCAGTTAGCGCGATCTGG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGTGGATGAGTTCCAGCTaGACAACACATTTAATCAAC +
Preference number: 4 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKWMSSS*TTHLIN
Trigger: GTTGATTAAATGTGTTGTGCAGCTGGAACTCATCCA...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTTTTGCCTTTGAATCCTaGTTTCCACAGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAFAFES*FPQGSP
Trigger: AGGACTGCCCTGTGGAAAGCAGGATTCAAAGGCAAA...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGCCCACAGGCCAGGCTaGTGGTCTCCTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSAHRPG*WSPASE
Trigger: TTCTGAAGCAGGAGACCAGCAGCCTGGCCTGTGGGC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTAGAGAAGGGCTACCCTaGCTACTGTGGGGATTAGCA +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTREGLP*LLWGLA
Trigger: TGCTAATCCCCACAGTAGCCAGGGTAGCCCTTCTCT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGAGTTGTCTGGGAGTTaGGATTCACATACTGATCCT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLELSGS*DSHTDP
Trigger: AGGATCAGTATGTGAATCCCAACTCCCAGACAACTC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGCATCCCTTGTTCTTaGAGGTACTGTATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSIPCS*RYCIPL
Trigger: GAGAGGAATACAGTACCTCCAAGAACAAGGGATGCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACACAACACTCTGAGAACTaGTTTCTCCAATGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTQHSEN*FLQWIP
Trigger: AGGAATCCATTGGAGAAACCAGTTCTCAGAGTGTTG...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTTTCCATACTTGTGTCTaGGAAAGCTGCATTGCACGC +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAFHTCV*ESCIAR
Trigger: GCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAA...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGGTCAACAGCGCATGTaGGATTGTGGTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLGQQRM*DCGFED
Trigger: ATCTTCAAAACCACAATCCCACATGCGCTGTTGACC...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGATGTTGTCGATAGTCTaGATGAGTTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLMLSIV*MSSSCT
Trigger: TGTGCAGCTGGAACTCATCCAGACTATCGACAACAT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTTGCGCAGCTGGGAGTaGTGCGCCTTCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVLRSWE*CAFFTS
Trigger: GGAAGTGAAGAAGGCGCATCACTCCCAGCTGCGCAA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAGTTTACACAATGACCTaGATACTAGAAAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTVYTMT*ILERHP
Trigger: AGGATGCCTTTCTAGTATTCAGGTCATTGTGTAAAC...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCAATCGATCGATTTTCTaGGCTTCCCCTGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPNRSIF*ASPGRR
Trigger: TCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCCAGCTCCAACTGACTaGTGCACTTCAGAATCTCAT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPPAPTD*CTSESH
Trigger: ATGAGATTCTGAAGTGCATCAGTCAGTTGGAGCTGG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCATCTCCAATGGATTCCTaGATACTTGCTATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPSPMDS*ILAICF
Trigger: GAAACAGATAGCAAGTATTCAGGAATCCATTGGAGA...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCATCTACAGACTTCTGTaGTATTGTATCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGIYRLL*YCIQWL
Trigger: AAGCCATTGGATACAATATCACAGAAGTCTGTAGAT...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGTCCAGGCTTCTCGATaGCTTTCTGATGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPVQASR*LSDVRV
Trigger: CACTCTAACATCAGAAAGTCATCGAGAAGCCTGGAC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACCACCTCGCAAGCTTTaGGCAGCTGGGAGTGATGCG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSPPRKL*AAGSDA
Trigger: CGCATCACTCCCAGCTGCGCAAAGCTTGCGAGGTGG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGAACTTCATTGACAACTaGCTCAAGGAGTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLNFIDN*LKESTA
Trigger: TGCAGTAGACTCCTTGAGGCAGTTGTCAATGAAGTT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAATGCAAGTTCCACTATaGTTTCATCTTGATCAGATG +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTMQVPL*FHLDQM
Trigger: CATCTGATCAAGATGAAAGCATAGTGGAACTTGCAT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGGAAAGCTGCATTaGACGCAAATTCAGACAAAC +
Preference number: 4 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQLGKLH*TQIQTN
Trigger: GTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAG...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGCGAATAAGTCGAATTaGTTCCATACTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLANKSN*FHTCVW
Trigger: CCAGACACAAGTATGGAAGCAATTCGACTTATTCGC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACATATCCAGTGTGCAGTTaGAAGTTTTATCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTYPVCS*KFYPRF
Trigger: AAATCTGGGATAAAACTTGCAACTGCACACTGGATA...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATCGCAGAAACCAGTGGTaGTTGTGGTCTGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHRRNQW*LWSVIH
Trigger: GTGGATAACAGACCACAAGCACCACTGGTTTCTGCG...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTTTGCCTTTGAATCCTaGTTTCCACAGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPFAFES*FPQGSP
Trigger: AGGACTGCCCTGTGGAAAGCAGGATTCAAAGGCAAA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTACGTGGGGCTTTTCCTaGCGTGGAAGACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSTWGFS*RGRQGR
Trigger: CCTTCCCTGTCTTCCACGGCAGGAAAAGCCCCACGT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACACTGTACAATGTCTTGTaGCTTTTCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTLYNVL*LFLTIM
Trigger: CATGATTGTGAGGAAAAGCCACAAGACATTGTACAG...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACACATATCTCGAATTGTTaGAGACCTGTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTHISNC*RPVPFH
Trigger: ATGAAACGGAACAGGTCTCCAACAATTCGAGATATG...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCACCTGGAAAGAATCAATaGTCGCTGGAAAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPPGKNQ*SLESVF
Trigger: AAAAACACTTTCCAGCGACCATTGATTCTTTCCAGG...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCACTTCTTTCTTACTTGTaGCTGGGAAGAAGACAATGT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPLLSYL*LGRRQC
Trigger: ACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAG...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCTCACAGGGTCCGTTTaGTCCTATTATCACTTATCT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLLTGSV*SYYHLS
Trigger: AGATAAGTGATAATAGGACCAAACGGACCCTGTGAG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAATAACCATCCATTTGTaGTCAAATGAGCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTITIHL*SNELVE
Trigger: TTCTACCAGCTCATTTGATCACAAATGGATGGTTAT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAATTCATCAGGAGCCTaGTCTTTTGTTCCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLNSSGA*SFVPVR
Trigger: TCTTACTGGAACAAAAGATCAGGCTCCTGATGAATT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTCTCCAATGGATTCCTaGATACTTGCTATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSPMDS*ILAICF
Trigger: GAAACAGATAGCAAGTATTCAGGAATCCATTGGAGA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTCGCTTGTGTATTCCTTaGAAGCCTGAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTRLCIP*KPEVYQ
Trigger: CTGATAGACCTCAGGCTTTCAAGGAATACACAAGCG...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGTGGGATTGTGGTTTTaGAGATATCCAGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPVGLWF*RYPVCS
Trigger: ACTGCACACTGGATATCTTCAAAACCACAATCCCAC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCAAAATACAGCTCTCCTaGGTTGTACTTCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAKIQLS*VVLLVE
Trigger: TTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCAGAATTAACCATCTGTaGTATACACCGTACAACCAT +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNARINHL*YTPYNH
Trigger: ATGGTTGTACGGTGTATAGCACAGATGGTTAATTCT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCATGCAAGTTCCACTATaGTTTCATCTTGATCAGATG +
Preference number: 4 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAMQVPL*FHLDQM
Trigger: CATCTGATCAAGATGAAAGCATAGTGGAACTTGCAT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAAGACAAACACTTCACTaGATCCTGGAAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: GRTREHELTLFKQAFCSTRQTLH*ILERIN
Trigger: ATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAGACAAACACTTCACTaGATCCTGGAAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPRQTLH*ILERIN
Trigger: ATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCT...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCGAATACATCACAGATTaGATAAAGTGCATGATTGCA +
Preference number: 4 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFEYITD*IKCMIA
Trigger: TGCAATCATGCACTTTATGCAATCTGTGATGTATTC...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCCAGATCGCGCTAACTaGTCATTGTCTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSPDRAN*SLSCCT
Trigger: TGTGCAGCAAGACAATGAGCAGTTAGCGCGATCTGG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATTTTGCCTTTGAATCCTaGTTTCCACAGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHFAFES*FPQGSP
Trigger: AGGACTGCCCTGTGGAAAGCAGGATTCAAAGGCAAA...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCAGGCTGCTGGTCTCCTaGTTCAGAAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSRLLVS*FRRLGL
Trigger: CAAGCCCAACCTTCTGAAGCAGGAGACCAGCAGCCT...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTCACTGGCAGCCCCATaGTCACAGGGTCCGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSLAAP*SQGPFG
Trigger: ACCAAACGGACCCTGTGAGCATGGGGCTGCCAGTGA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCCTGGAAAGAATCAATaGTCGCTGGAAAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLPGKNQ*SLESVF
Trigger: AAAAACACTTTCCAGCGACCATTGATTCTTTCCAGG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR CAA 72 bp AGGACAGGTAGAGATGGACAATGCAACATCCACTGCTaGTTCTGGGGTATTCCTTATGTTGGTAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: RTGRDGQCNIHC*FWGIPYVGKFV
Trigger: CACAAACTTACCAACATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCATTGTCCATCTCTACCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
3UTR CAA 72 bp AGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTaGCCCTCATTCACCCATGACTTGGTGGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: RIGLFISLCYYI*PSFTHDLVVGI
Trigger: AATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGCTTTTGCTTCTCCATaGGGAGGACTCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHAFASP*GGLCFS
Trigger: TGAAAAACAGAGTCCTCCTCATGGAGAAGCAAAAGC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTGGTGGAAGGGTGCTTaGTCCAGCTTTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSWWKGA*SSFCFS
Trigger: GGAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTATATCCACTACACTCTaGGCATCTGCACAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTISTTL*ASAQIL
Trigger: GAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATAT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAATCGATCGATTTTCTaGGCTTCCCCTGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSNRSIF*ASPGRR
Trigger: TCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTCTTGTAGACCCACACTaGATGCAGCCAGAAAAGGCG +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSLVDPH*MQPEKA
Trigger: CGCCTTTTCTGGCTGCATTCAGTGTGGGTCTACAAG...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTGTGCCAGCTCCAACTaGCTGATGCACTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVCASSN*LMHFRI
Trigger: GATTCTGAAGTGCATCAGTCAGTTGGAGCTGGCACA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCGAATGTTAGCAGCTTaGGAATTAACCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPRMLAA*ELTICA
Trigger: AGCACAGATGGTTAATTCTCAAGCTGCTAACATTCG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGGTGGTTGTGATATCTaGAAAACTACTCCGATTCGC +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHGGCDI*KTTPIR
Trigger: GCGAATCGGAGTAGTTTTTCAGATATCACAACCACC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAAACACGAGTTGATCTaGAATTTATGTACCTGGATC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLKHELI*NLCTWI
Trigger: GATCCAGGTACATAAATTTCAGATCAACTCGTGTTT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTACTATCTGGAGCATTaGCAGTCAAGTGCCCATAAG +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTYYLEH*QSSAHK
Trigger: CTTATGGGCACTTGACTGGCAATGCTCCAGATAGTA...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTACCAAGTTCTTGACTaGCCCTTCCTTGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPYQVLD*PFLEQF
Trigger: AAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTCTGTGTACTGTAGCTaGCTATTCCTGATGATGATG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPSVYCS*LFLMMM
Trigger: CATCATCATCAGGAATAGGCAGCTACAGTACACAGA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTCACGGCCTCCATGAGTaGTTTAGCTGTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSHGLHE*FSCLGH
Trigger: ATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTG...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTAACATGGGCCTCACATaGTCCAAATGTGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTNMGLT*SKCVAL
Trigger: AAGTGCAACACATTTGGAGCATGTGAGGCCCATGTT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGAGAATTAACCATCTGTaGTATACACCGTACAACCAT +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLRINHL*YTPYNH
Trigger: ATGGTTGTACGGTGTATAGCACAGATGGTTAATTCT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGAATTAACCATCTGTaGTATACACCGTACAACCAT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLRINHL*YTPYNH
Trigger: ATGGTTGTACGGTGTATAGCACAGATGGTTAATTCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATTGTGTCTGGGAAAGCTaGATTGCACGCAAATTCAGA +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHCVWES*IARKFR
Trigger: TCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACA...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGATCAGACACATATTTTaGACAATGGCGAATAAGTCG +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLIRHIF*TMANKS
Trigger: CGACTTATTCGCCATTGTGCAAAATATGTGTCTGAT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCGCAGAAACCAGTGGTaGTTGTGGTCTGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVRRNQW*LWSVIH
Trigger: GTGGATAACAGACCACAAGCACCACTGGTTTCTGCG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTACATTCAAAAGCCTCTaGTGGACCTCCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSTFKSL*WTSSQA
Trigger: TGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAATGT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGAACTTAGTGCTTCACTaGAGACATTCAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQNLVLH*RHSKAS
Trigger: AGAGGCTTTTGAATGTCTGCAGTGAAGCACTAAGTT...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGTGTTACTACATCTTaGCCTCATTCACCCATGACT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPCVTTS*PHSPMT
Trigger: AGTCATGGGTGAATGAGGGCAAGATGTAGTAACACA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCAACACTCTGAGAACTaGTTTCTCCAATGGATTCCT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPQHSEN*FLQWIP
Trigger: AGGAATCCATTGGAGAAACCAGTTCTCAGAGTGTTG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGGACAAAATCCACAATaGCATTTCCATCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPGQNPQ*HFHLAL
Trigger: CAAGGCTAGATGGAAATGCCATTGTGGATTTTGTCC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCATATCTCGAATTGTTaGAGACCTGTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQHISNC*RPVPFH
Trigger: ATGAAACGGAACAGGTCTCCAACAATTCGAGATATG...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTCACTTCACTGCATCCTaGAAAGAATCAATGGTCGCT +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTHFTAS*KESMVA
Trigger: AGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTG...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCAGTTTCTCCAGAATTaGGTCGCCAGGTCAACAGCG +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSQFLQN*VARSTA
Trigger: CGCTGTTGACCTGGCGACCCAATTCTGGAGAAACTG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTTTCAAAAGCCTCTGCTaGACCTCCTCCCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSFKSLC*TSSQAL
Trigger: TAGTGCCTGGGAGGAGGTCCAGCAGAGGCTTTTGAA...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCATCCACTGCTTGTTCTaGGGTATTCCTTATGTTGGT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPIHCLF*GIPYVG
Trigger: ACCAACATAAGGAATACCCCAGAACAAGCAGTGGAT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGACTCATCTCTTGCTCTaGGGGTTTTTCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVTHLLL*GFFLTK
Trigger: CTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCGCTTGTGTATTCCTTaGAAGCCTGAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVRLCIP*KPEVYQ
Trigger: CTGATAGACCTCAGGCTTTCAAGGAATACACAAGCG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTCCAAAAGTACATCACTaGGTACTTCTAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAPKVHH*VLLNTE
Trigger: CTCAGTATTTAGAAGTACTCAGTGATGTACTTTTGG...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGTGGGATTGTGGTTTTaGAGATATCCAGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSVGLWF*RYPVCS
Trigger: ACTGCACACTGGATATCTTCAAAACCACAATCCCAC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTGGAGTGTTGCAAGTTTaGGTAAGACTTCTAAGCATC +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTGVLQV*VRLLSI
Trigger: GATGCTTAGAAGTCTTACTCAAACTTGCAACACTCC...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGGCCAGAGACTACATaGCATGTAATGATTTCATCT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPWPETT*HVMISS
Trigger: AGATGAAATCATTACATGTCATGTAGTCTCTGGCCA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTACCCAGTGGGTCTCATaGGGAGTTTGGTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLTQWVS*GVWSEV
Trigger: GACTTCAGACCAAACTCCTCATGAGACCCACTGGGT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCACGGCCTCCATGAGTaGTTTAGCTGTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLHGLHE*FSCLGH
Trigger: ATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATGCACTTGTAAAGGGTaGCTGAACATGGCTCACGGC +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSCTCKG*LNMAHG
Trigger: GCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTGCGAATAAGTCGAATTaGTTCCATACTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTANKSN*FHTCVW
Trigger: CCAGACACAAGTATGGAAGCAATTCGACTTATTCGC...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCACCCTGTCTTCAGGTaGTACGTTCATATCATCGCT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVHPVFR*YVHIIA
Trigger: AGCGATGATATGAACGTAGCACCTGAAGACAGGGTG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGGATGAGTTCCAGCTaGACAACACATTTAATCAAC +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPWMSSS*TTHLIN
Trigger: GTTGATTAAATGTGTTGTGCAGCTGGAACTCATCCA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGACAGTGTCTCATGGCTaGCTTAGTCATAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVTVSHG*LSHSHV
Trigger: CACATGGCTATGACTAAGGCAGCCATGAGACACTGT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCAATATCTTCAGGTGTaGTGCCAAGCATCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSQYLQV*CQASLV
Trigger: AACAAGGGATGCTTGGCACCACACCTGAAGATATTG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAATCTTGCTAGTGCCTaGACATATGCATCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSNLASA*TYASLS
Trigger: GGAGAGAGATGCATATGTCCAGGCACTAGCAAGATT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTCTTAAGAAATCCTTCTaGAATCTGAAGTTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTALKKSF*NLKLAS
Trigger: GCTTGCTAACTTCAGATTCCAGAAGGATTTCTTAAG...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGAGAATCAATGGTCGCTaGAAAGTGTTTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLRINGR*KVFFKY
Trigger: GTATTTGAAAAACACTTTCCAGCGACCATTGATTCT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGACATATTTTGCACAATaGCGAATAAGTCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLTYFAQ*RISRIA
Trigger: AGCAATTCGACTTATTCGCCATTGTGCAAAATATGT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTTACTGTTAAACCCCTaGTTCTTACATCTAATTTGC +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLLLLNP*FLHLIC
Trigger: GCAAATTAGATGTAAGAACCAGGGGTTTAACAGTAA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCAGTTTCTCCAGAATTaGGTCGCCAGGTCAACAGCG +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLQFLQN*VARSTA
Trigger: CGCTGTTGACCTGGCGACCCAATTCTGGAGAAACTG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGTTATCCACAGACCTTaGTTGAATAGAATCATGAAT +
Preference number: 4 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLVIHRP*LNRIMN
Trigger: ATTCATGATTCTATTCAACCAAGGTCTGTGGATAAC...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGTTATCCACAGACCTTaGTTGAATAGAATCATGAAT +
Preference number: 4 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLVIHRP*LNRIMN
Trigger: ATTCATGATTCTATTCAACCAAGGTCTGTGGATAAC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGGCTCTGTGTCATCCTaGAGACTTTTATCTACATCA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSGSVSS*RLLSTS
Trigger: TGATGTAGATAAAAGTCTTCAGGATGACACAGAGCC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATCTGAGGGTTTTTCCTaGCCAAGAGTTGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSSEGFS*PRVVWE
Trigger: CTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAGGAACTCACCCACTTaGGTAGAGTCTAATCTTTCC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVRNSPT*VESNLS
Trigger: GGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCATCTACAGACTTCTGTaGTATTGTATCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPIYRLL*YCIQWL
Trigger: AAGCCATTGGATACAATATCACAGAAGTCTGTAGAT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTGTCCAGGCTTCTCGATaGCTTTCTGATGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVVQASR*LSDVRV
Trigger: CACTCTAACATCAGAAAGTCATCGAGAAGCCTGGAC...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGTATCTCAGATAGCCTaGGTGTGCAAAAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSVSQIA*VCKNLQ
Trigger: CTGAAGATTTTTGCACACTCAGGCTATCTGAGATAC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAACTTCATTGACAACTaGCTCAAGGAGTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSNFIDN*LKESTA
Trigger: TGCAGTAGACTCCTTGAGGCAGTTGTCAATGAAGTT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCCCGGTTGTTTGGAATaGAAGTTCCACTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVPGCLE*KFHYAF
Trigger: GAAAGCATAGTGGAACTTGCATTCCAAACAACCGGG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCACAAGGGTGACAATGTaGCCGGTTGTTTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSTRVTM*PVVWNA
Trigger: TGCATTCCAAACAACCGGGCACATTGTCACCCTTGT...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCATCAGACACATATTTTaGACAATGGCGAATAAGTCG +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPIRHIF*TMANKS
Trigger: CGACTTATTCGCCATTGTGCAAAATATGTGTCTGAT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTACAGATTGCATAAAGTaGATGATTGCAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTATDCIK*MIASCC
Trigger: ACAACAACTTGCAATCATGCACTTTATGCAATCTGT...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCAATGCAACATCCACTaGTTGTTCTGGGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVQCNIH*LFWGIP
Trigger: AGGAATACCCCAGAACAAGCAGTGGATGTTGCATTG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGGGTAGAGATGGACAATaGAACATCCACTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVGRDGQ*NIHCLF
Trigger: GAACAAGCAGTGGATGTTGCATTGTCCATCTCTACC...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACGAGGACATTTGGACTaGCATGCCAACTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSRGHLD*HANSKG
Trigger: GCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATATCAACAGTCTGAGGTaGCAAATATCTAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHINSLR*QISKLR
Trigger: CCTCAACTTAGATATTTGCCACCTCAGACTGTTGAT...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCAATATCTTCAGGTGTaGTGCCAAGCATCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVQYLQV*CQASLV
Trigger: AACAAGGGATGCTTGGCACCACACCTGAAGATATTG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCAAGAGAGTTTGTCCTTaGTTGCATTCTAGGTATCTT +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPKRVCP*LHSRYL
Trigger: AAGATACCTAGAATGCAACCAAGGACAAACTCTCTT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAATCTTGCTAGTGCCTaGACATATGCATCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVNLASA*TYASLS
Trigger: GGAGAGAGATGCATATGTCCAGGCACTAGCAAGATT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCTTAAGAAATCCTTCTaGAATCTGAAGTTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPLKKSF*NLKLAS
Trigger: GCTTGCTAACTTCAGATTCCAGAAGGATTTCTTAAG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCACTTCACTGCATCCTaGAAAGAATCAATGGTCGCT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVHFTAS*KESMVA
Trigger: AGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTTCCATACTTGTGTCTaGGAAAGCTGCATTGCACGC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSFHTCV*ESCIAR
Trigger: GCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTTTACTGTTAAACCCCTaGTTCTTACATCTAATTTGC +
Preference number: 4 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTALLLNP*FLHLIC
Trigger: GCAAATTAGATGTAAGAACCAGGGGTTTAACAGTAA...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGGGTCAACAGCGCATGTaGGATTGTGGTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVGQQRM*DCGFED
Trigger: ATCTTCAAAACCACAATCCCACATGCGCTGTTGACC...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAGCACTAAAAGGGACTaGAGTGTTGCAAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSSTKRD*SVASLS
Trigger: ACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCATAACATTTAGCATCTaGGTGAGAGTAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSITFSI*VRVALA
Trigger: AGCCAAAGCTACTCTCACTCAGATGCTAAATGTTAT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAACGAAGTCTTTTCCTaGAAAGTCATGTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVNEVFS*KVMLVH
Trigger: GTGGACCAACATGACTTTTCAGGAAAAGACTTCGTT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACCAGCTCCAACTGACTaGTGCACTTCAGAATCTCAT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSPAPTD*CTSESH
Trigger: ATGAGATTCTGAAGTGCATCAGTCAGTTGGAGCTGG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAATTCATCAGGAGCCTaGTCTTTTGTTCCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSNSSGA*SFVPVR
Trigger: TCTTACTGGAACAAAAGATCAGGCTCCTGATGAATT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATCACTGGTGGAAGGGTaGTTGATCCAGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSSLVEG*LIQLLL
Trigger: AAGCAAAAGCTGGATCAAGCACCCTTCCACCAGTGA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATGTTTCAGCTGCAGTTaGCTGATCAGCTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSCFSCS*LISFSL
Trigger: CAGACTGAAGCTGATCAGGCAACTGCAGCTGAAACA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTTATCTTCAGGTGTGGTaGCAAGCATCCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSYLQVW*QASLVL
Trigger: AAGAACAAGGGATGCTTGGCACCACACCTGAAGATA...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGGCTGTCTTGGCCATCTaGTCCATTTCTAAGTTATAC +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVAVLAI*SISKLY
Trigger: GTATAACTTAGAAATGGAGCAGATGGCCAAGACAGC...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTAGTTCCTATAAGCTGTaGCAGCTCCAACTGACTGAT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSSYKL*QLQLTD
Trigger: ATCAGTCAGTTGGAGCTGGCACAGCTTATAGGAACT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAACTTCATTGACAACTaGCTCAAGGAGTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVNFIDN*LKESTA
Trigger: TGCAGTAGACTCCTTGAGGCAGTTGTCAATGAAGTT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCCCGGTTGTTTGGAATaGAAGTTCCACTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSPGCLE*KFHYAF
Trigger: GAAAGCATAGTGGAACTTGCATTCCAAACAACCGGG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACACCCTGTCTTCAGGTaGTACGTTCATATCATCGCT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSHPVFR*YVHIIA
Trigger: AGCGATGATATGAACGTAGCACCTGAAGACAGGGTG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTATCCAGTGTGCAGTTaGAAGTTTTATCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTYPVCS*KFYPRF
Trigger: AAATCTGGGATAAAACTTGCAACTGCACACTGGATA...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTTTCACTTCCACACCTaGCAAAAACGTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVFHFHT*QKRGAF
Trigger: AAAAGCCCCACGTTTTTGGCAGGTGTGGAAGTGAAA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTTCTACATCATTTGTATaGAGGTCAAGGTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSSTSFV*RSRSPS
Trigger: CGAAGGGGACCTTGACCTCCATACAAATGATGTAGA...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTAGCATCCCTTGTTCTTaGAGGTACTGTATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSIPCS*RYCIPL
Trigger: GAGAGGAATACAGTACCTCCAAGAACAAGGGATGCT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCAGAATCAATGGTCGCTaGAAAGTGTTTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPRINGR*KVFFKY
Trigger: GTATTTGAAAAACACTTTCCAGCGACCATTGATTCT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTTCCATACTTGTGTCTaGGAAAGCTGCATTGCACGC +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLFHTCV*ESCIAR
Trigger: GCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGGTCAACAGCGCATGTaGGATTGTGGTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSGQQRM*DCGFED
Trigger: ATCTTCAAAACCACAATCCCACATGCGCTGTTGACC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAGACGCAGAAACCAGTaGTGCTTGTGGTCTGTTATC +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLRRRNQ*CLWSVI
Trigger: GATAACAGACCACAAGCACCACTGGTTTCTGCGTCT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATATCCACTACACTCTaGGCATCTGCACAAATCCTC +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLISTTL*ASAQIL
Trigger: GAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTTTGTCTCAGGGTGTTTaGTTTCACTCATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSLSQGV*FHSSLA
Trigger: AGCAAGAGATGAGTGAAATCAAACACCCTGAGACAA...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAAGGAACTCACCCACTTaGGTAGAGTCTAATCTTTCC +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSRNSPT*VESNLS
Trigger: GGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCT...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTCGAATGTTAGCAGCTTaGGAATTAACCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVRMLAA*ELTICA
Trigger: AGCACAGATGGTTAATTCTCAAGCTGCTAACATTCG...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTACATTCCTTGGTCTTaGGTATCAACGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVYIPWS*VSTRTS
Trigger: TGATGTTCGCGTTGATACTCAAGACCAAGGAATGTA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTGAGAGGGTAGTAGAATaGTGCATGAGCTTTAAACCT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVERVVE*CMSFKP
Trigger: AGGTTTAAAGCTCATGCATCATTCTACTACCCTCTC...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCTGTTCAGGTGGTTGTaGTATCTGAAAAACTACTCC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSLFRWL*YLKNYS
Trigger: GGAGTAGTTTTTCAGATATCACAACCACCTGAACAG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCGGATTCATTTTGCAGTaGTTCAAGTTTTGGTCCATA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSGFILQ*FKFWSI
Trigger: TATGGACCAAAACTTGAATCACTGCAAAATGAATCC...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTACATTTGGACTGGCATaGCAACTCAAAAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVTFGLA*QLKRQE
Trigger: TTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCTCCAATGTTGCCATCTaGACTTGCATTTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSSNVAI*TCIYSS
Trigger: ACTACTATAAATGCAAGTGCAGATGGCAACATTGGA...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGCTGTCTTGGCCATCTaGTCCATTTCTAAGTTATAC +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSAVLAI*SISKLY
Trigger: GTATAACTTAGAAATGGAGCAGATGGCCAAGACAGC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGGATTCCTGAATACTTaGTATCTGTTTCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSGFLNT*YLFPVH
Trigger: GTGGACTGGAAACAGATAGCAAGTATTCAGGAATCC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTGTGTCTGGGAAAGCTaGATTGCACGCAAATTCAGA +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLCVWES*IARKFR
Trigger: TCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAACTTAGTGCTTCACTaGAGACATTCAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVNLVLH*RHSKAS
Trigger: AGAGGCTTTTGAATGTCTGCAGTGAAGCACTAAGTT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATGGTGTTGTACTATCTaGAGCATTGCCAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSWCCTI*SIASQV
Trigger: CACTTGACTGGCAATGCTCCAGATAGTACAACACCA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGCTTCCTGTAATGCTTaGTTTTCCATGCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSASCNA*FSMRAK
Trigger: CTTTGCACGCATGGAAAACCAAGCATTACAGGAAGC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTTTTCCTCACAATCATaGTTTTCTCCGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTFSSQS*FSPSYN
Trigger: GTTATATGACGGAGAAAACCATGATTGTGAGGAAAA...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGAGTTGTCTGGGAGTTaGGATTCACATACTGATCCT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSELSGS*DSHTDP
Trigger: AGGATCAGTATGTGAATCCCAACTCCCAGACAACTC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGGACAAAATCCACAATaGCATTTCCATCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSGQNPQ*HFHLAL
Trigger: CAAGGCTAGATGGAAATGCCATTGTGGATTTTGTCC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTTAAGAAATCCTTCTaGAATCTGAAGTTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSLKKSF*NLKLAS
Trigger: GCTTGCTAACTTCAGATTCCAGAAGGATTTCTTAAG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTACATATTTTGCACAATaGCGAATAAGTCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTTYFAQ*RISRIA
Trigger: AGCAATTCGACTTATTCGCCATTGTGCAAAATATGT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTGTTATCCACAGACCTTaGTTGAATAGAATCATGAAT +
Preference number: 4 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTVIHRP*LNRIMN
Trigger: ATTCATGATTCTATTCAACCAAGGTCTGTGGATAAC...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATGTTGTCGATAGTCTaGATGAGTTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLMLSIV*MSSSCT
Trigger: TGTGCAGCTGGAACTCATCCAGACTATCGACAACAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCTTCTTTCTTACTTGTaGCTGGGAAGAAGACAATGT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVLLSYL*LGRRQC
Trigger: ACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTTGTCTCAGGGTGTTTaGTTTCACTCATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLLSQGV*FHSSLA
Trigger: AGCAAGAGATGAGTGAAATCAAACACCCTGAGACAA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAAACGAAGTCTTTTCCTaGAAAGTCATGTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSNEVFS*KVMLVH
Trigger: GTGGACCAACATGACTTTTCAGGAAAAGACTTCGTT...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTCTCCAATGGATTCCTaGATACTTGCTATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSPMDS*ILAICF
Trigger: GAAACAGATAGCAAGTATTCAGGAATCCATTGGAGA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCCAAAAGTACATCACTaGGTACTTCTAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVPKVHH*VLLNTE
Trigger: CTCAGTATTTAGAAGTACTCAGTGATGTACTTTTGG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTACATTCCTTGGTCTTaGGTATCAACGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLYIPWS*VSTRTS
Trigger: TGATGTTCGCGTTGATACTCAAGACCAAGGAATGTA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGCTTTCTGCTCAACATaGGGCCAATATAACACACAA +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSAFCST*GQYNTQ
Trigger: TTGTGTGTTATATTGGCCTCATGTTGAGCAGAAAGC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGAGTTTGTCCTTGGTTaGATTCTAGGTATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLEFVLG*ILGILQ
Trigger: CTGCAAGATACCTAGAATGCAACCAAGGACAAACTC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGGATTCCTGAATACTTaGTATCTGTTTCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLGFLNT*YLFPVH
Trigger: GTGGACTGGAAACAGATAGCAAGTATTCAGGAATCC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTATCCAGTGTGCAGTTaGAAGTTTTATCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVYPVCS*KFYPRF
Trigger: AAATCTGGGATAAAACTTGCAACTGCACACTGGATA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTGGATGAGTTCCAGCTaGACAACACATTTAATCAAC +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVWMSSS*TTHLIN
Trigger: GTTGATTAAATGTGTTGTGCAGCTGGAACTCATCCA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCAACTTAGTGCTTCACTaGAGACATTCAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSNLVLH*RHSKAS
Trigger: AGAGGCTTTTGAATGTCTGCAGTGAAGCACTAAGTT...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAACCTCCGCAAACCATaGCAGATTTGTTATTTTAAT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSNLRKP*QICYFN
Trigger: ATTAAAATAACAAATCTGGCATGGTTTGCGGAGGTT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCATATGCAACAGAAATTaGTGTTCCTGGAATTCCATT +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSICNRN*CSWNSI
Trigger: AATGGAATTCCAGGAACACCAATTTCTGTTGCATAT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTCTGCATTCTGCAGAATaGATAGAAGTAACTGCAATG +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVLHSAE*IEVTAM
Trigger: CATTGCAGTTACTTCTATCCATTCTGCAGAATGCAG...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTTTATTTTTCACCTGTaGACTGTGAAGGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVFIFHL*TVKVCG
Trigger: ACCACAGACCTTCACAGTCCACAGGTGAAAAATAAA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCAGAATCAATGGTCGCTaGAAAGTGTTTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSRINGR*KVFFKY
Trigger: GTATTTGAAAAACACTTTCCAGCGACCATTGATTCT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCCTGGAAAGAATCAATaGTCGCTGGAAAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSPGKNQ*SLESVF
Trigger: AAAAACACTTTCCAGCGACCATTGATTCTTTCCAGG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCACATCTATAGTTCTTTaGGTAAGTTTCACTTCCACA +
Preference number: 4 (lower is better)
Translates to: RPASLYIFHRMITSISDSTSIVL*VSFTST
Trigger: TGTGGAAGTGAAACTTACCCAAAGAACTATAGATGT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR CAA 72 bp GCCAGAGACTACATGACATGTAATGATTTCATCTCTTaGAAGCTAGCAAAATGTGTCCTTGTGTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: ARDYMTCNDFIS*KLAKCVLVYSC
Trigger: ACAAGAATACACAAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTCTCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCAGTACAGTCCCTTCATaGATTTCTATGTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSSTVPS*ISMCCD
Trigger: ATCACAACACATAGAAATTCATGAAGGGACTGTACT...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTATCTACAGACTTCTGTaGTATTGTATCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVIYRLL*YCIQWL
Trigger: AAGCCATTGGATACAATATCACAGAAGTCTGTAGAT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACCTAAGAGAAATATGTaGCAGGTAGTTACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSPKRNM*QVVTVS
Trigger: ACTGACAGTAACTACCTGTCACATATTTCTCTTAGG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTAAGAACACCTCAATTTaGATCTTCAGATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVKNTSI*IFRCVL
Trigger: CAAGACACATCTGAAGATGCAAATTGAGGTGTTCTT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGACAGATTGCATAAAGTaGATGATTGCAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVTDCIK*MIASCC
Trigger: ACAACAACTTGCAATCATGCACTTTATGCAATCTGT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGCAATGAAAGAATCTTaGATCGTAGTTCATGAGACT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSAMKES*IVVHET
Trigger: AGTCTCATGAACTACGATCCAAGATTCTTTCATTGC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGACCTCAAATTGTTCTaGATTATCAGTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSDLKLF*IISARH
Trigger: ATGTCTGGCACTGATAATCCAGAACAATTTGAGGTC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGACCTCAAATTGTTCTaGATTATCAGTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLDLKLF*IISARH
Trigger: ATGTCTGGCACTGATAATCCAGAACAATTTGAGGTC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTAAGAGAGTTTGTCCTTaGTTGCATTCTAGGTATCTT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSKRVCP*LHSRYL
Trigger: AAGATACCTAGAATGCAACCAAGGACAAACTCTCTT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTTTATTTTTCACCTGTaGACTGTGAAGGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLFIFHL*TVKVCG
Trigger: ACCACAGACCTTCACAGTCCACAGGTGAAAAATAAA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCATATCTCGAATTGTTaGAGACCTGTTCCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLHISNC*RPVPFH
Trigger: ATGAAACGGAACAGGTCTCCAACAATTCGAGATATG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGACATATTTTGCACAATaGCGAATAAGTCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: VCVTYISKALWGPQFLRVTYFAQ*RISRIA
Trigger: AGCAATTCGACTTATTCGCCATTGTGCAAAATATGT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACTTCTTTCTTACTTGTaGCTGGGAAGAAGACAATGT +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSLLSYL*LGRRQC
Trigger: ACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATAACCATCCATTTGTaGTCAAATGAGCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLITIHL*SNELVE
Trigger: TTCTACCAGCTCATTTGATCACAAATGGATGGTTAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR TCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCACCAAAAGTACATCACTaGGTACTTCTAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSPKVHH*VLLNTE
Trigger: CTCAGTATTTAGAAGTACTCAGTGATGTACTTTTGG...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR TCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATGAGGAGTTTGGTCTaGAGTCAAAACTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLMRSLV*SQNCLY
Trigger: ATACAAACAGTTTTGACTTCAGACCAAACTCCTCAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATGCAAGTTCCACTATaGTTTCATCTTGATCAGATG +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLMQVPL*FHLDQM
Trigger: CATCTGATCAAGATGAAAGCATAGTGGAACTTGCAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAGACAAACACTTCACTaGATCCTGGAAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLRQTLH*ILERIN
Trigger: ATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR GCA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAATCAGACACATATTTTaGACAATGGCGAATAAGTCG +
Preference number: 4 (lower is better)
Translates to: HFILQNTALLSCTSCRSSIRHIF*TMANKS
Trigger: CGACTTATTCGCCATTGTGCAAAATATGTGTCTGAT...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTACAGATTGCATAAAGTaGATGATTGCAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVTDCIK*MIASCC
Trigger: ACAACAACTTGCAATCATGCACTTTATGCAATCTGT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGAATACATCACAGATTaGATAAAGTGCATGATTGCA +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSEYITD*IKCMIA
Trigger: TGCAATCATGCACTTTATGCAATCTGTGATGTATTC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTTAAGTTCCCATCATTaGTTGTTTATTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SMNTFPVNLTSANHARFVLSSHH*LFIPSS
Trigger: GGAACTTGGAATAAACAAGCAATGATGGGAACTTAA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTATTCCTGAGTATCATTaGAAGAGACTGACAATCTAT +
Preference number: 4 (lower is better)
Translates to: IFHRMITSISDSLSVQKSIPEYH*KRLTIY
Trigger: ATAGATTGTCAGTCTCTTCCAATGATACTCAGGAAT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CCA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTTACTGTTAAACCCCTaGTTCTTACATCTAATTTGC +
Preference number: 4 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSLLLNP*FLHLIC
Trigger: GCAAATTAGATGTAAGAACCAGGGGTTTAACAGTAA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
3UTR CAA 72 bp ACAGCAATCTGGATTCATTTTGCAGTGATTCAAGTTTaGGTCCATAAAGGATCATTCTATTTTAATGGCTCA +
Preference number: 4 (lower is better)
Translates to: TAIWIHFAVIQV*VHKGSFYFNGS
Trigger: TGAGCCATTAAAATAGAATGATCCTTTATGGACCAAAACTTGAATCACTGCAAAATGAATCCAGATTGCTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR GCA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGAATACATCACAGATTaGATAAAGTGCATGATTGCA +
Preference number: 4 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLEYITD*IKCMIA
Trigger: TGCAATCATGCACTTTATGCAATCTGTGATGTATTC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS CCA 90 bp GAGGTGGCGGCGGCTCTCAGAGGCACCGCGAGAGAAGGGCTACCCTaGCTACTGTGGGGATTAGCACCCGCCGCGGCCGCGAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: EVAAALRGTAREGLP*LLWGLAPAAAANWP
Trigger: GGGCCAGTTCGCGGCCGCGGCGGGTGCTAATCCCCACAGTAGCCAGGGTAGCCCTTCTCTCGCGGTGCCTCTGAGAGCCGCCGCCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 90 bp GCGGCTCTCAGAGGCACCGCGAGAGAAGGGCTACCCTGGCTACTGTaGGGATTAGCACCCGCCGCGGCCGCGAACTGGCCCCCATCACCG +
Preference number: 5 (lower is better)
Translates to: AALRGTAREGLPWLL*GLAPAAAANWPPSP
Trigger: CGGTGATGGGGGCCAGTTCGCGGCCGCGGCGGGTGCTAATCCCCACAGTAGCCAGGGTAGCCCTTCTCTCGCGGTGCCTCTGAGAGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 90 bp CAGAGAAGGAGGCGGCGGCTCGTCCGACCCGCGGCTCCCAGCGGCTaGAGGGGAGGAGGAGGAGAGGAAGGAAGAGAAGAGAGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: QRRRRRLVRPAAPSG*RGGGGEEGREERKE
Trigger: CTCCTTTCTCTCTTCTCTTCCTTCCTCTCCTCCTCCTCCCCTCCAGCCGCTGGGAGCCGCGGGTCGGACGAGCCGCCGCCTCCTTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 90 bp GGAGGAGGAGGAGAGGAAGGAAGAGAAGAGAGAAAGGAGAGGGGGTaGAGGTGGGGGATTGGAGGCGTGGAGGGCAGCGGCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: GGGGEEGREERKERG*RWGIGGVEGSGRIR
Trigger: CCTGATCCTGCCGCTGCCCTCCACGCCTCCAATCCCCCACCTCCACCCCCTCTCCTTTCTCTCTTCTCTTCCTTCCTCTCCTCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS TCA 90 bp CCACTGGTGGCTTTGCACAAGCAGCAGTGCAGCCTGGGCACTGCTTaGTTCATCTCTGAGAGCTCTTGCACGGCGGCTCTGGGACCCCGC +
Preference number: 5 (lower is better)
Translates to: PLVALHKQQCSLGTA*FISESSCTAALGPR
Trigger: GCGGGGTCCCAGAGCCGCCGTGCAAGAGCTCTCAGAGATGAATCAAGCAGTGCCCAGGCTGCACTGCTGCTTGTGCAAAGCCACCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CCA 90 bp GAGCTCTTGCACGGCGGCTCTGGGACCCCGCATCCCAATGCGAATTaGGCTAGAAATGTGGGGCTGGATTCGAAGCCTCATACTTACCCT +
Preference number: 5 (lower is better)
Translates to: ELLHGGSGTPHPNAN*ARNVGLDSKPHTYP
Trigger: AGGGTAAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCGGGGTCCCAGAGCCGCCGTGCAAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CCA 90 bp GATTGCAAACTGCAGAGCCTTAAACTGCCTAGAGTCAAACTACTCTaGGGCTCCATCACAGGAGCCAGGAAAGCAGGGTCCACAGCAGGC +
Preference number: 5 (lower is better)
Translates to: DCKLQSLKLPRVKLL*GSITGARKAGSTAG
Trigger: GCCTGCTGTGGACCCTGCTTTCCTGGCTCCTGTGATGGAGCCCCAGAGTAGTTTGACTCTAGGCAGTTTAAGGCTCTGCAGTTTGCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518290.1
CDS GCA 90 bp GAAAAGCAAGGACTGAGGAAGATACAGCAAGGCCACTGGTGGCTTTaGACAAGCAGCAGTGCAGCCTGGGCACTGCTTGATTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: EKQGLRKIQQGHWWL*TSSSAAWALLDSSL
Trigger: CAGAGATGAATCAAGCAGTGCCCAGGCTGCACTGCTGCTTGTGCAAAGCCACCAGTGGCCTTGCTGTATCTTCCTCAGTCCTTGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS GCA 90 bp CGTCCAAGCCAACTTAAACATGGGCCTCACATGCTCCAAATGTGTTaGACTTGTAAAGGGTGCCTGAACATGGCTCACGGCCTCCATGAG +
Preference number: 5 (lower is better)
Translates to: RPSQLKHGPHMLQMC*TCKGCLNMAHGLHE
Trigger: CTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGTTGGCTTGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS CCA 90 bp GCGGCTCTGGGACCCCGCATCCCAATGCGAATTGGGCTAGAAATGTaGGGCTGGATTCGAAGCCTCATACTTACCCTATTATCACTTATC +
Preference number: 5 (lower is better)
Translates to: AALGPRIPMRIGLEM*GWIRSLILTLLSLI
Trigger: GATAAGTGATAATAGGGTAAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCGGGGTCCCAGAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS-3UTR CAA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGCAGTTTCTCCAGAATaGGGTCGCCAGGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLAVSPE*GRQVNS
Trigger: GCTGTTGACCTGGCGACCCAATTCTGGAGAAACTGC...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS TCA 90 bp GGCTGCTGGTCTCCTGCTTCAGAAGGTTGGGCTTGGATTTGCCTTTaGATCCTGCAGAAAAGGGAAGTTTCTGGGATTAGTTTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GCWSPASEGWAWICL*ILQKREVSGISLGR
Trigger: CCTTCCCAAACTAATCCCAGAAACTTCCCTTTTCTGCAGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGAGACCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCTGCTTGATCCAGCTTTaGCTTCTCCATGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNACLIQL*LLHEED
Trigger: GTCCTCCTCATGGAGAAGCAAAAGCTGGATCAAGCA...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCACTCATACCAAGTTCTaGACTGCCCCTTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNATHTKF*TAPSLS
Trigger: GCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGAAAGCGGTACATTCCTaGGTCTTGAGTATCAACGCG +
Preference number: 5 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKKAVHS*VLSINA
Trigger: CGCGTTGATACTCAAGACCAAGGAATGTACCGCTTT...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGAGGTTGGGCTTGGATTaGCCTTTGAATCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKRLGLD*PLNPAF
Trigger: GAAAGCAGGATTCAAAGGCAAATCCAAGCCCAACCT...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAGTAGTTCATGAGACTTaGGATCTGGTGGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: GRTREHELTLFKQAFCSTVVHET*DLVVHL
Trigger: CAGATGGACCACCAGATCCAAAGTCTCATGAACTAC...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGACTCATACCAAGTTCTaGACTGCCCCTTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLTHTKF*TAPSLS
Trigger: GCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGGATTCCAACCATATCTCGAATaGTTGGAGACCTGTTCCGTT +
Preference number: 5 (lower is better)
Translates to: GGDSWGHNGNLSRYPKGFQPYLE*LETCSV
Trigger: AACGGAACAGGTCTCCAACAATTCGAGATATGGTTG...GAATCCCTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCTCTGGGAAAGCTGCATaGCACGCAAATTCAGACAAA +
Preference number: 5 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGSGKAA*HANSDK
Trigger: TTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGA...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCGCAGTTTCTCCAGAATaGGGTCGCCAGGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPAVSPE*GRQVNS
Trigger: GCTGTTGACCTGGCGACCCAATTCTGGAGAAACTGC...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGT +
Preference number: 5 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGGKKTM*SIVWMS
Trigger: ACTCATCCAGACTATCGACAACATTGTCTTCTTCCC...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAAAAGCGGTACATTCCTaGGTCTTGAGTATCAACGCG +
Preference number: 5 (lower is better)
Translates to: GRTREHELTLFKQAFCSTKAVHS*VLSINA
Trigger: CGCGTTGATACTCAAGACCAAGGAATGTACCGCTTT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGAACCAGATGTAGTCTaGAGTAGTAGGCAGAGTACA +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTEPDVV*SSRQST
Trigger: TGTACTCTGCCTACTACTCAAGACTACATCTGGTTC...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS CCA 90 bp CTGGGACCCCGCATCCCAATGCGAATTGGGCTAGAAATGTGGGGCTaGATTCGAAGCCTCATACTTACCCTATTATCACTTATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: LGPRIPMRIGLEMWG*IRSLILTLLSLIFR
Trigger: TCTAAAGATAAGTGATAATAGGGTAAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCGGGGTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACATGGATTCCTGAATACTaGCTATCTGTTTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTWIPEY*LSVSSP
Trigger: TGGACTGGAAACAGATAGCAAGTATTCAGGAATCCA...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACATCGAATGTTAGCAGCTaGAGAATTAACCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTSNVSS*RINHLC
Trigger: GCACAGATGGTTAATTCTCAAGCTGCTAACATTCGA...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCAATGTGCCCGGTTGTTaGGAATGCAAGTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNANVPGC*ECKFHY
Trigger: ATAGTGGAACTTGCATTCCAAACAACCGGGCACATT...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAGAATTGCTTCCATACTaGTGTCTGGGAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPELLPY*CLGKLH
Trigger: ATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTC...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp TTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAGGCCATTCTCTAAACAGTTaGTACCAGATCGCGCTAACT +
Preference number: 5 (lower is better)
Translates to: LPGTTKYAKGTAAAQSTGHSLNS*YQIALT
Trigger: AGTTAGCGCGATCTGGTACAAACTGTTTAGAGAATG...GCCTGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGT +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAGKKTM*SIVWMS
Trigger: ACTCATCCAGACTATCGACAACATTGTCTTCTTCCC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAGTACATTCCTTGGTCTaGAGTATCAACGCGAACATC +
Preference number: 5 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPVHSLV*SINANI
Trigger: GATGTTCGCGTTGATACTCAAGACCAAGGAATGTAC...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAAAGCGGTACATTCCTaGGTCTTGAGTATCAACGCG +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLKAVHS*VLSINA
Trigger: CGCGTTGATACTCAAGACCAAGGAATGTACCGCTTT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGCAAAGGGGGAGATTCCTGGGGTCATAATGGGAACTTGTCAAGGTATCCCAAGGTCCTCTGTTCGTTGTaGGAATTAAACGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: GKGGDSWGHNGNLSRYPKVLCSL*ELNAFA
Trigger: TGCAAAAGCGTTTAATTCCAACAACGAACAGAGGAC...CTTGGGATACCTTGACAAGTTCCCATTATGACCCCAGGAATCTCCCCCTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GATGAGGCCCATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCATTCAGAAGGTTGGGCTaGGATTTGCCTTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: DEAHSLGTLGYLEPLNMPFRRLG*DLPLNP
Trigger: AGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAA...TGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATGGGCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTTCCTGCTTCAGAAGGTaGGGCTTGGATTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTASCFRR*GLDLPL
Trigger: CAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGA...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGGGTCATAATGGGAACTaGTCAAGGTATCCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLGHNGN*SRYPKG
Trigger: TCCCTTGGGATACCTTGACAAGTTCCCATTATGACC...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGCTCACAGGGTCCGTTaGGTCCTATTATCACTTATC +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLAHRVR*VLLSLI
Trigger: GATAAGTGATAATAGGACCAAACGGACCCTGTGAGC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS GCA 90 bp GGTCTCCTGCTTCAGAAGGTTGGGCTTGGATTTGCCTTTGAATCCTaGAGAAAAGGGAAGTTTCTGGGATTAGTTTGGGAAGGCATCTTA +
Preference number: 5 (lower is better)
Translates to: GLLLQKVGLGFAFES*RKGKFLGLVWEGIL
Trigger: TAAGATGCCTTCCCAAACTAATCCCAGAAACTTCCCTTTTCTGCAGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS-3UTR CAA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACAAGAGTTTGTCCTTGGTaGCATTCTAGGTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: GRTREHELTLFKQAFCSTRVCPW*HSRYLA
Trigger: TGCAAGATACCTAGAATGCAACCAAGGACAAACTCT...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAATGTGCCCGGTTGTTaGGAATGCAAGTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLNVPGC*ECKFHY
Trigger: ATAGTGGAACTTGCATTCCAAACAACCGGGCACATT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGTCTGGGAAAGCTGCATaGCACGCAAATTCAGACAAA +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSGKAA*HANSDK
Trigger: TTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGA...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGAATTGCTTCCATACTaGTGTCTGGGAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLELLPY*CLGKLH
Trigger: ATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAATATCCAGTGTGCAGTaGCAAGTTTTATCCCAGATT +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTISSVQ*QVLSQI
Trigger: AATCTGGGATAAAACTTGCAACTGCACACTGGATAT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGTGTGGGATTGTGGTTTaGAAGATATCCAGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLCGIVV*KISSVQ
Trigger: CTGCACACTGGATATCTTCAAAACCACAATCCCACA...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACACAGACTTCTGTGATATaGTATCCAATGGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTQTSVI*YPMAFH
Trigger: GTGAAAAGCCATTGGATACAATATCACAGAAGTCTG...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLGKKTM*SIVWMS
Trigger: ACTCATCCAGACTATCGACAACATTGTCTTCTTCCC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGGTACATTCCTTGGTCTaGAGTATCAACGCGAACATC +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLVHSLV*SINANI
Trigger: GATGTTCGCGTTGATACTCAAGACCAAGGAATGTAC...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCGTCCTCTGTTCGTTGTaGGAATTAAACGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAVLCSL*ELNAFA
Trigger: TGCAAAAGCGTTTAATTCCAACAACGAACAGAGGAC...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp TCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGAAGGCCATGAGGTGGTaGGACAGCAGTTTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: SLGTLGYLEPLNMPKEQLKAMRW*DSSFQN
Trigger: ATTTTGAAAACTGCTGTCCAACCACCTCATGGCCTT...CAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS TCA 90 bp ACATTTCCTCCAACTAGCCCTAAACCCACAAATTCATCAGGAGCCTaGTCTTTTGTTCCAGTAAGAGATCCTTCTCTGCCTCGCACTGTT +
Preference number: 5 (lower is better)
Translates to: TFPPTSPKPTNSSGA*SFVPVRDPSLPRTV
Trigger: AACAGTGCGAGGCAGAGAAGGATCTCTTACTGGAACAAAAGATCAGGCTCCTGATGAATTTGTGGGTTTAGGGCTAGTTGGAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGCCTTCTTCACTTCCTaGTCGGCCAATATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHAFFTS*SANIFS
Trigger: GGAGAAGATATTGGCCGACAAGGAAGTGAAGAAGGC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATTTTATCTACATCATTaGTATGGAGGTCAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRTREHELTLFKQAFCSTFYLHH*YGGQGP
Trigger: GGGACCTTGACCTCCATACAAATGATGTAGATAAAA...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTTTCCTGACCAAGAGTaGTCTGGGAGTTGGGATTCA +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPFPDQE*SGSWDS
Trigger: TGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGATTGTCTCAGGGTGTTaGATTTCACTCATCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLIVSGC*ISLISC
Trigger: GCAAGAGATGAGTGAAATCAAACACCCTGAGACAAT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGAAGGACCCGTGAGCATGAGCTGACACTGTTTAAACAGGCTTTCTGCTCAACATTCCTGATGATGATGTaGACTCCAGGGAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: GRTREHELTLFKQAFCSTFLMMM*TPGNLN
Trigger: GTTTAAATTCCCTGGAGTCAACATCATCATCAGGAA...TGTTGAGCAGAAAGCCTGTTTAAACAGTGTCAGCTCATGCTCACGGGTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGGTGCCAAGCATCCCTaGTTCTTGGAGGTACTGTAT +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHGAKHP*FLEVLY
Trigger: ATACAGTACCTCCAAGAACAAGGGATGCTTGGCACC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTCCATATCTCGAATTGTaGGAGACCTGTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAPYLEL*ETCSVS
Trigger: TGAAACGGAACAGGTCTCCAACAATTCGAGATATGG...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGAATGTGCCCGGTTGTTaGGAATGCAAGTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQNVPGC*ECKFHY
Trigger: ATAGTGGAACTTGCATTCCAAACAACCGGGCACATT...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGATAACTCAAAGAGAATaGGGAACCATCCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQITQRE*GTILSP
Trigger: GGGTGAGAGGATGGTTCCCAATTCTCTTTGAGTTAT...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAAGCTTTCTCTGTCTGTaGTTCTGGCAATTTCATATT +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTSFLCL*FWQFHI
Trigger: AATATGAAATTGCCAGAACAACAGACAGAGAAAGCT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCATTCTCTAAACAGTTaGTACCAGATCGCGCTAACT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLHSLNS*YQIALT
Trigger: AGTTAGCGCGATCTGGTACAAACTGTTTAGAGAATG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGCCCAGAGCACAATCCACAGACCTTGGTaGAATAGAATCATGAATATC +
Preference number: 5 (lower is better)
Translates to: GLPGTTKYAKGTAAAQSTIHRPW*NRIMNI
Trigger: GATATTCATGATTCTATTCAACCAAGGTCTGTGGAT...TGTGCTCTGGGCTGCAGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp GGTAGGAAACCTCAGCTCCAGCGTCCTTTTAAAGAGCAGAGGGATGTAAATGCCTGGAGTGTTGCAAGTTaGAGTAAGACTTCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: GRKPQLQRPFKEQRDVNAWSVAS*SKTSKH
Trigger: ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCA...GGCATTTACATCCCTCTGCTCTTTAAAAGGACGCTGGAGCTGAGGTTTCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCTGTGTTACTACATCTaGCCCTCATTCACCCATGAC +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPLCYYI*PSFTHD
Trigger: GTCATGGGTGAATGAGGGCAAGATGTAGTAACACAG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS TCA 90 bp AGGAAAGCAGGGTCCACAGCAGGCAGTGACTCTGGTTTGTGGAACTaGGAGACAGAAGTGTTAGAAAAACTCACTTCATACAAACACTAT +
Preference number: 5 (lower is better)
Translates to: RKAGSTAGSDSGLWN*ETEVLEKLTSYKHY
Trigger: ATAGTGTTTGTATGAAGTGAGTTTTTCTAACACTTCTGTCTCTCAGTTCCACAAACCAGAGTCACTGCCTGCTGTGGACCCTGCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518290.1
CDS GCA 90 bp ATGGCGAATAAGTCGAATTGCTTCCATACTTGTGTCTGGGAAAGCTaGATTGCACGCAAATTCAGACAAACACTTCACTGCATCCTGGAA +
Preference number: 5 (lower is better)
Translates to: MANKSNCFHTCVWES*IARKFRQTLHCILE
Trigger: TTCCAGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 90 bp TTTGCCTTTGAATCCTGCAGAAAAGGGAAGTTTCTGGGATTAGTTTaGGAAGGCATCTTATGTAAAGGTGAAACAGCCCGTATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FAFESCRKGKFLGLV*EGILCKGETARMEA
Trigger: TGCCTCCATACGGGCTGTTTCACCTTTACATAAGATGCCTTCCCAAACTAATCCCAGAAACTTCCCTTTTCTGCAGGATTCAAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATACATGTTCTCACAGCTaGCAGTACAGTCCCTTCATG +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHTCSHS*QYSPFM
Trigger: CATGAAGGGACTGTACTGCAAGCTGTGAGAACATGT...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATATGTTTCAGCTGCAGTaGCCTGATCAGCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHMFQLQ*PDQLQS
Trigger: AGACTGAAGCTGATCAGGCAACTGCAGCTGAAACAT...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTTTCCTGACCAAGAGTaGTCTGGGAGTTGGGATTCA +
Preference number: 5 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTFPDQE*SGSWDS
Trigger: TGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAA...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGTCTCTAAGAACTTCATaGACAACTGCCTCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQSLRTS*TTASRS
Trigger: ACTCCTTGAGGCAGTTGTCAATGAAGTTCTTAGAGA...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGCATGATTGCAAGTTGTaGTCATCCATTCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLHDCKL*SSIQLS
Trigger: AGAAAGCTGAATGGATGACAACAACTTGCAATCATG...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGTGGGATTGTGGTTTaGAAGATATCCAGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPCGIVV*KISSVQ
Trigger: CTGCACACTGGATATCTTCAAAACCACAATCCCACA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp TTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCTGCAGTCCTCTGTTCGTaGTTGGAATTAAACGCTTTT +
Preference number: 5 (lower is better)
Translates to: FTRDSGLPGTTKYAKGTAAVLCS*LELNAF
Trigger: AAAAGCGTTTAATTCCAACAACGAACAGAGGACTGC...AGCTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTAGGTTGGGCTTGGATTaGCCTTTGAATCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTRLGLD*PLNPAF
Trigger: GAAAGCAGGATTCAAAGGCAAATCCAAGCCCAACCT...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTGCAACATCCACTGCTaGTTCTGGGGTATTCCTTAT +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPCNIHC*FWGIPY
Trigger: ATAAGGAATACCCCAGAACAAGCAGTGGATGTTGCA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS GCA 90 bp ATCTTTCCTCTTGATGTAAGAATTGGGCAATATCTTCAGGTGTGGTaGCAAGCATCCCTTGTTCTTGGAGGTACTGTATTCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: IFPLDVRIGQYLQVW*QASLVLGGTVFLSL
Trigger: CAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAGGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS GCA 90 bp TGCATCTCTCTCCAGCTGAATGCTGAAAATGCATGCAATTCTGATTaGACATCTTATACCTTCCAGGCAAAGAGAGGCTACTTCAGTATC +
Preference number: 5 (lower is better)
Translates to: CISLQLNAENACNSD*TSYTFQAKRGYFSI
Trigger: GATACTGAAGTAGCCTCTCTTTGCCTGGAAGGTATAAGATGTGCAATCAGAATTGCATGCATTTTCAGCATTCAGCTGGAGAGAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS GCA 90 bp GTCTGGGAAAGCTGCATTGCACGCAAATTCAGACAAACACTTCACTaGATCCTGGAAAGAATCAATGGTCGCTGGAAAGTGTTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: VWESCIARKFRQTLH*ILERINGRWKVFFK
Trigger: TTTGAAAAACACTTTCCAGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 90 bp TTCAGACAAACACTTCACTGCATCCTGGAAAGAATCAATGGTCGCTaGAAAGTGTTTTTCAAATACAAGGGTGACAATGTGCCCGGTTGT +
Preference number: 5 (lower is better)
Translates to: FRQTLHCILERINGR*KVFFKYKGDNVPGC
Trigger: ACAACCGGGCACATTGTCACCCTTGTATTTGAAAAACACTTTCCAGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 90 bp TTTTGCACAATGGCGAATAAGTCGAATTGCTTCCATACTTGTGTCTaGGAAAGCTGCATTGCACGCAAATTCAGACAAACACTTCACTGC +
Preference number: 5 (lower is better)
Translates to: FCTMANKSNCFHTCV*ESCIARKFRQTLHC
Trigger: GCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 90 bp GCTGACTTCTTCATTAACAGCAGACGCAGAAACCAGTGGTGCTTGTaGTCTGTTATCCACAGACCTTGGTTGAATAGAATCATGAATATC +
Preference number: 5 (lower is better)
Translates to: ADFFINSRRRNQWCL*SVIHRPWLNRIMNI
Trigger: GATATTCATGATTCTATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTCTGGTGGAAGGGTGCTaGATCCAGCTTTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVLVEGC*IQLLLL
Trigger: GAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCAG...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGTCCCCTTCGTGTTCTaGGGATATATGATCAACAGT +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHVPFVF*GYMINS
Trigger: ACTGTTGATCATATATCCCAAGAACACGAAGGGGAC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCAGAGTTTGTCCTTGGTaGCATTCTAGGTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPRVCPW*HSRYLA
Trigger: TGCAAGATACCTAGAATGCAACCAAGGACAAACTCT...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTCCATATCTCGAATTGTaGGAGACCTGTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTPYLEL*ETCSVS
Trigger: TGAAACGGAACAGGTCTCCAACAATTCGAGATATGG...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CCCTGTGTTACTACATCTTGCCCTCATTCACCCATGACTTGGTGGTTGGTATTGAGCTTTCTCTGTCTGTaGTTCTGGCAATTTCATATT +
Preference number: 5 (lower is better)
Translates to: PCVTTSCPHSPMTWWLVLSFLCL*FWQFHI
Trigger: AATATGAAATTGCCAGAACAACAGACAGAGAAAGCT...CAATACCAACCACCAAGTCATGGGTGAATGAGGGCAAGATGTAGTAACACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CATTCACTAGGGACTCTGGGTTACCTGGAACCACTAAATATGCCAAAGGAACAGCATGATTGCAAGTTGTaGTCATCCATTCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HSLGTLGYLEPLNMPKEQHDCKL*SSIQLS
Trigger: AGAAAGCTGAATGGATGACAACAACTTGCAATCATG...CTGTTCCTTTGGCATATTTAGTGGTTCCAGGTAACCCAGAGTCCCTAGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518230.5
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAGCAGTTTCTCCAGAATaGGGTCGCCAGGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSAVSPE*GRQVNS
Trigger: GCTGTTGACCTGGCGACCCAATTCTGGAGAAACTGC...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS GCA 90 bp CTTCCATCCAGATCGAATGTTAGCAGCTTGAGAATTAACCATCTGTaGTATACACCGTACAACCATATCTCGAATTGTTGGAGACCTGTT +
Preference number: 5 (lower is better)
Translates to: LPSRSNVSSLRINHL*YTPYNHISNCWRPV
Trigger: AACAGGTCTCCAACAATTCGAGATATGGTTGTACGGTGTATAGCACAGATGGTTAATTCTCAAGCTGCTAACATTCGATCTGGATGGAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 90 bp AGGTCTATCAGACACATATTTTGCACAATGGCGAATAAGTCGAATTaGTTCCATACTTGTGTCTGGGAAAGCTGCATTGCACGCAAATTC +
Preference number: 5 (lower is better)
Translates to: RSIRHIFCTMANKSN*FHTCVWESCIARKF
Trigger: GAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAATATGTGTCTGATAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 90 bp GCTTGTGTATTCCTTGAAAGCCTGAGGTCTATCAGACACATATTTTaGACAATGGCGAATAAGTCGAATTGCTTCCATACTTGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ACVFLESLRSIRHIF*TMANKSNCFHTCVW
Trigger: CCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAATATGTGTCTGATAGACCTCAGGCTTTCAAGGAATACACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 90 bp AATTTTGCTGACTTCTTCATTAACAGCAGACGCAGAAACCAGTGGTaGTTGTGGTCTGTTATCCACAGACCTTGGTTGAATAGAATCATG +
Preference number: 5 (lower is better)
Translates to: NFADFFINSRRRNQW*LWSVIHRPWLNRIM
Trigger: CATGATTCTATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTCAGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTACTATGCGAGGACATTaGGACTGGCATGCCAACTCA +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVTMRGH*DWHANS
Trigger: TGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACAAAATCCACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTGTTCTGTACAATGTCTaGTGGCTTTTCCTCACAATC +
Preference number: 5 (lower is better)
Translates to: TKSTSTKRDWSVASLSKTVLYNV*WLFLTI
Trigger: GATTGTGAGGAAAAGCCACAAGACATTGTACAGAAC...AGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGTGGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCTTCCTGATGATGATGTaGACTCCAGGGAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPFLMMM*TPGNLN
Trigger: GTTTAAATTCCCTGGAGTCAACATCATCATCAGGAA...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCAACCATATCTCGAATaGTTGGAGACCTGTTCCGTT +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSQPYLE*LETCSV
Trigger: AACGGAACAGGTCTCCAACAATTCGAGATATGGTTG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCATAACTCAAAGAGAATaGGGAACCATCCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSITQRE*GTILSP
Trigger: GGGTGAGAGGATGGTTCCCAATTCTCTTTGAGTTAT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATAGAATTGGGCTGTTCATTTCCCTGTGTTACTACATCTTGCCCTCATTCACCCCAGACTTCTGTGATATaGTATCCAATGGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: IELGCSFPCVTTSCPHSPQTSVI*YPMAFH
Trigger: GTGAAAAGCCATTGGATACAATATCACAGAAGTCTG...GGGTGAATGAGGGCAAGATGTAGTAACACAGGGAAATGAACAGCCCAATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS TCA 90 bp TTAAAAAGTTGTTGTGATGTTAAAAAGCGGTACATTCCTTGGTCTTaGGTATCAACGCGAACATCAAAGTCCACCGCATCTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LKSCCDVKKRYIPWS*VSTRTSKSTASLCA
Trigger: AGCACAGAGAGATGCGGTGGACTTTGATGTTCGCGTTGATACTCAAGACCAAGGAATGTACCGCTTTTTAACATCACAACAACTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000518789.5
ENST00000520381.5
ENST00000522878.5
CDS GCA 90 bp ATTTTCACTGTCACTACCATCCTCTATAGTTCCAATGTTGCCATCTaGACTTGCATTTATAGTAGTCCCTTCTCCCATATCTCCAACAAC +
Preference number: 5 (lower is better)
Translates to: IFTVTTILYSSNVAI*TCIYSSPFSHISNN
Trigger: GTTGTTGGAGATATGGGAGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGTAGTGACAGTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS GCA 90 bp CAAATTGTTCTGGATTATCAGTGCCAGACATCTGTGTACTGTAGCTaGCTATTCCTGATGATGATGTTGACTCCAGGGAATTTAAACTTC +
Preference number: 5 (lower is better)
Translates to: QIVLDYQCQTSVYCS*LFLMMMLTPGNLNF
Trigger: GAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAACAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS CCA 90 bp TGTAAGCAATCTAGAGATGTACTAACTATGCGAGGACATTTGGACTaGCATGCCAACTCAAAAGGCAAGAAGTACTTGTCTGCTTCAATA +
Preference number: 5 (lower is better)
Translates to: CKQSRDVLTMRGHLD*HANSKGKKYLSASI
Trigger: TATTGAAGCAGACAAGTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CCA 90 bp AAAGCTGCATTGCACGCAAATTCAGACAAACACTTCACTGCATCCTaGAAAGAATCAATGGTCGCTGGAAAGTGTTTTTCAAATACAAGG +
Preference number: 5 (lower is better)
Translates to: KAALHANSDKHFTAS*KESMVAGKCFSNTR
Trigger: CCTTGTATTTGAAAAACACTTTCCAGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 90 bp TTTAATTTTGCTGACTTCTTCATTAACAGCAGACGCAGAAACCAGTaGTGCTTGTGGTCTGTTATCCACAGACCTTGGTTGAATAGAATC +
Preference number: 5 (lower is better)
Translates to: FNFADFFINSRRRNQ*CLWSVIHRPWLNRI
Trigger: GATTCTATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTCAGCAAAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGAAGCATCCCTTGTTCTaGGAGGTACTGTATTCCTCT +
Preference number: 5 (lower is better)
Translates to: VCVTYISKALWGPQFLRVKHPLF*EVLYSS
Trigger: AGAGGAATACAGTACCTCCAAGAACAAGGGATGCTT...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGGTGCCAAGCATCCCTaGTTCTTGGAGGTACTGTAT +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLGAKHP*FLEVLY
Trigger: ATACAGTACCTCCAAGAACAAGGGATGCTTGGCACC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTAGTGCTTTAGCTGTCTaGGCCATCTGCTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSALAV*AICSIS
Trigger: AGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACT...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGCAACCATATCTCGAATaGTTGGAGACCTGTTCCGTT +
Preference number: 5 (lower is better)
Translates to: VCVTYISKALWGPQFLRVQPYLE*LETCSV
Trigger: AACGGAACAGGTCTCCAACAATTCGAGATATGGTTG...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCATTCTCTAAACAGTTaGTACCAGATCGCGCTAACT +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSHSLNS*YQIALT
Trigger: AGTTAGCGCGATCTGGTACAAACTGTTTAGAGAATG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTTCAGAAGGTTGGGCTaGGATTTGCCTTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: VCVTYISKALWGPQFLRVFRRLG*DLPLNP
Trigger: AGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATCCTGCTTCAGAAGGTaGGGCTTGGATTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSSCFRR*GLDLPL
Trigger: CAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTCCTGCTTCAGAAGGTaGGGCTTGGATTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSCFRR*GLDLPL
Trigger: CAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATAGTTCCCATCATTGCTaGTTTATTCCAAGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHSSHHC*FIPSSC
Trigger: ACAGGAACTTGGAATAAACAAGCAATGATGGGAACT...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ACCAGCACTAAAAGGGACTGGAGTGTTGCAAGTTTGAGTAAGACTTCTAAGCATGCAGTGATTCAAGTTTaGGTCCATAAAGGATCATTC +
Preference number: 5 (lower is better)
Translates to: TSTKRDWSVASLSKTSKHAVIQV*VHKGSF
Trigger: GAATGATCCTTTATGGACCAAAACTTGAATCACTGC...ATGCTTAGAAGTCTTACTCAAACTTGCAACACTCCAGTCCCTTTTAGTGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTAAGCATCCCTTGTTCTaGGAGGTACTGTATTCCTCT +
Preference number: 5 (lower is better)
Translates to: IFHRMITSISDSLSVQKSKHPLF*EVLYSS
Trigger: AGAGGAATACAGTACCTCCAAGAACAAGGGATGCTT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAGTGCTTTAGCTGTCTaGGCCATCTGCTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSALAV*AICSIS
Trigger: AGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGTCGAATGTTAGCAGCTaGAGAATTAACCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: VCVTYISKALWGPQFLRVSNVSS*RINHLC
Trigger: GCACAGATGGTTAATTCTCAAGCTGCTAACATTCGA...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTCTGGGAAAGCTGCATaGCACGCAAATTCAGACAAA +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSGKAA*HANSDK
Trigger: TTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGAATTGCTTCCATACTaGTGTCTGGGAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSELLPY*CLGKLH
Trigger: ATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCATGATTGCAAGTTGTaGTCATCCATTCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSHDCKL*SSIQLS
Trigger: AGAAAGCTGAATGGATGACAACAACTTGCAATCATG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCAGACTTCTGTGATATaGTATCCAATGGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSQTSVI*YPMAFH
Trigger: GTGAAAAGCCATTGGATACAATATCACAGAAGTCTG...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCGTACATTCCTTGGTCTaGAGTATCAACGCGAACATC +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSVHSLV*SINANI
Trigger: GATGTTCGCGTTGATACTCAAGACCAAGGAATGTAC...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GTGTGTGTGACATACATAAGTAAAGCTCTTTGGGGTCCTCAATTTTTAAGAGTGGCAGTCCTCTGTTCGTaGTTGGAATTAAACGCTTTT +
Preference number: 5 (lower is better)
Translates to: VCVTYISKALWGPQFLRVAVLCS*LELNAF
Trigger: AAAAGCGTTTAATTCCAACAACGAACAGAGGACTGC...CACTCTTAAAAATTGAGGACCCCAAAGAGCTTTACTTATGTATGTCACACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTAGGTTGGGCTTGGATTaGCCTTTGAATCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLRLGLD*PLNPAF
Trigger: GAAAGCAGGATTCAAAGGCAAATCCAAGCCCAACCT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTTCAGAAGGTTGGGCTaGGATTTGCCTTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVFRRLG*DLPLNP
Trigger: AGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCTGACAGTGGTTTCATaGACAGTTTACACAATGACC +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSLTVVS*TVYTMT
Trigger: GGTCATTGTGTAAACTGTCAATGAAACCACTGTCAG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTGGATTCCTGAATACTaGCTATCTGTTTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSWIPEY*LSVSSP
Trigger: TGGACTGGAAACAGATAGCAAGTATTCAGGAATCCA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTCTCTAAGAACTTCATaGACAACTGCCTCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSLRTS*TTASRS
Trigger: ACTCCTTGAGGCAGTTGTCAATGAAGTTCTTAGAGA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTCCATATCTCGAATTGTaGGAGACCTGTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLPYLEL*ETCSVS
Trigger: TGAAACGGAACAGGTCTCCAACAATTCGAGATATGG...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp AGTATGAATACATTTCCAGTAAATCTAACCTCCGCAAACCATGCCAGATTTGTTTCGAATGTTAGCAGCTaGAGAATTAACCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: SMNTFPVNLTSANHARFVSNVSS*RINHLC
Trigger: GCACAGATGGTTAATTCTCAAGCTGCTAACATTCGA...AACAAATCTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATAACTCAAAGAGAATaGGGAACCATCCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLITQRE*GTILSP
Trigger: GGGTGAGAGGATGGTTCCCAATTCTCTTTGAGTTAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATGTGGGATTGTGGTTTaGAAGATATCCAGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSCGIVV*KISSVQ
Trigger: CTGCACACTGGATATCTTCAAAACCACAATCCCACA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AGACCTGCATCTCTGTACATTTTTCACAGGATGATTACCAGTATCTCAGATAGCATCCACAGACCTTGGTaGAATAGAATCATGAATATC +
Preference number: 5 (lower is better)
Translates to: RPASLYIFHRMITSISDSIHRPW*NRIMNI
Trigger: GATATTCATGATTCTATTCAACCAAGGTCTGTGGAT...GCTATCTGAGATACTGGTAATCATCCTGTGAAAAATGTACAGAGATGCAGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTGCAGTCCTCTGTTCGTaGTTGGAATTAAACGCTTTT +
Preference number: 5 (lower is better)
Translates to: IFHRMITSISDSLSVQKSAVLCS*LELNAF
Trigger: AAAAGCGTTTAATTCCAACAACGAACAGAGGACTGC...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCTCTATAGTTCCAATGTaGCCATCTGCACTTGCATTT +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSSIVPM*PSALAF
Trigger: AAATGCAAGTGCAGATGGCAACATTGGAACTATAGA...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAATTGTCTCAGGGTGTTaGATTTCACTCATCTCTTGC +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSIVSGC*ISLISC
Trigger: GCAAGAGATGAGTGAAATCAAACACCCTGAGACAAT...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTGGATTCCTGAATACTaGCTATCTGTTTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLWIPEY*LSVSSP
Trigger: TGGACTGGAAACAGATAGCAAGTATTCAGGAATCCA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTCTCTAAGAACTTCATaGACAACTGCCTCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSLRTS*TTASRS
Trigger: ACTCCTTGAGGCAGTTGTCAATGAAGTTCTTAGAGA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp ATTTTTCACAGGATGATTACCAGTATCTCAGATAGCCTGAGTGTGCAAAAATCTATATCCAGTGTGCAGTaGCAAGTTTTATCCCAGATT +
Preference number: 5 (lower is better)
Translates to: IFHRMITSISDSLSVQKSISSVQ*QVLSQI
Trigger: AATCTGGGATAAAACTTGCAACTGCACACTGGATAT...AGATTTTTGCACACTCAGGCTATCTGAGATACTGGTAATCATCCTGTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTGTCCTCTGTTCGTTGTaGGAATTAAACGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLVLCSL*ELNAFA
Trigger: TGCAAAAGCGTTTAATTCCAACAACGAACAGAGGAC...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS CCA 90 bp CTGTTCCGTTTCATTATATGTTCAAAAGGTCTTAAGAAATCCTTCTaGAATCTGAAGTTAGCAAGCTCCCCTTTCTCTAAGAACTTCATT +
Preference number: 5 (lower is better)
Translates to: LFRFIICSKGLKKSF*NLKLASSPFSKNFI
Trigger: AATGAAGTTCTTAGAGAAAGGGGAGCTTGCTAACTTCAGATTCCAGAAGGATTTCTTAAGACCTTTTGAACATATAATGAAACGGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCCTTTTTCCATTTGTTTaGCTTCCTGTAATGCTTGGT +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSLFPFV*LPVMLG
Trigger: ACCAAGCATTACAGGAAGCAAAACAAATGGAAAAAG...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp AACCATCAGAGCACAATTCACAGTATGAATACATTTCCAGTAAATCTAACCTCCAAAGAACACCTCAATTaGCATCTTCAGATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: NHQSTIHSMNTFPVNLTSKEHLN*HLQMCL
Trigger: AAGACACATCTGAAGATGCAAATTGAGGTGTTCTTT...GGAGGTTAGATTTACTGGAAATGTATTCATACTGTGAATTGTGCTCTGATGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATATCCAGTGTGCAGTaGCAAGTTTTATCCCAGATT +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLISSVQ*QVLSQI
Trigger: AATCTGGGATAAAACTTGCAACTGCACACTGGATAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTTCATTCACCCATGACTaGGTGGTTGGTATTGTTTTT +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLSFTHD*VVGIVF
Trigger: AAAAACAATACCAACCACCAAGTCATGGGTGAATGA...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCATATATGCAACAGAAATaGGTGTTCCTGGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSYMQQK*VFLEFH
Trigger: ATGGAATTCCAGGAACACCAATTTCTGTTGCATATA...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp CATTTTATCCTTCAAAATACAGCTCTCCTGAGTTGTACTTCTTGTAGAAGTTCAAGCTTTCTCTGTCTGTaGTTCTGGCAATTTCATATT +
Preference number: 5 (lower is better)
Translates to: HFILQNTALLSCTSCRSSSFLCL*FWQFHI
Trigger: AATATGAAATTGCCAGAACAACAGACAGAGAAAGCT...TGAACTTCTACAAGAAGTACAACTCAGGAGAGCTGTATTTTGAAGGATAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS-3UTR CAA 90 bp GACTACATGACATGTAATGATTTCATCTCTTTGAAGCTAGCAAAATGTGTCCTTATCCACAGACCTTGGTaGAATAGAATCATGAATATC +
Preference number: 5 (lower is better)
Translates to: DYMTCNDFISLKLAKCVLIHRPW*NRIMNI
Trigger: GATATTCATGATTCTATTCAACCAAGGTCTGTGGAT...AAGGACACATTTTGCTAGCTTCAAAGAGATGAAATCATTACATGTCATGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520381.5
CDS TCA 72 bp CGCCCCTCTCACTCGTCCCTCCGGCCCTGGTGGCGGTaGGGGAGCCCGGCCCGGGCGGCTGTCTGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: RPSHSSLRPWWR*GSPARAAVCRE
Trigger: TTCCCGGCAGACAGCCGCCCGGGCCGGGCTCCCTCACCGCCACCAGGGCCGGAGGGACGAGTGAGAGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CCA 72 bp GCGGCTCTCAGAGGCACCGCGAGAGAAGGGCTACCCTaGCTACTGTGGGGATTAGCACCCGCCGCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: AALRGTAREGLP*LLWGLAPAAAA
Trigger: CGCGGCCGCGGCGGGTGCTAATCCCCACAGTAGCCAGGGTAGCCCTTCTCTCGCGGTGCCTCTGAGAGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 72 bp AGGCGGCGGCTCGTCCGACCCGCGGCTCCCAGCGGCTaGAGGGGAGGAGGAGGAGAGGAAGGAAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: RRRLVRPAAPSG*RGGGGEEGREE
Trigger: CTCTTCTCTTCCTTCCTCTCCTCCTCCTCCCCTCCAGCCGCTGGGAGCCGCGGGTCGGACGAGCCGCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 72 bp AGAGGCACCGCGAGAGAAGGGCTACCCTGGCTACTGTaGGGATTAGCACCCGCCGCGGCCGCGAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: RGTAREGLPWLL*GLAPAAAANWP
Trigger: GGGCCAGTTCGCGGCCGCGGCGGGTGCTAATCCCCACAGTAGCCAGGGTAGCCCTTCTCTCGCGGTGCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CCA 72 bp CACGGCGGCTCTGGGACCCCGCATCCCAATGCGAATTaGGCTAGAAATGTGGGGCTGGATTCGAAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: HGGSGTPHPNAN*ARNVGLDSKPH
Trigger: ATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCGGGGTCCCAGAGCCGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CCA 72 bp GGCCACTGGTGGCTTTGCACAAGCAGCAGTGCAGCCTaGGCACTGCTTGATTCATCTCTGAGAGCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: GHWWLCTSSSAA*ALLDSSLRALA
Trigger: TGCAAGAGCTCTCAGAGATGAATCAAGCAGTGCCCAGGCTGCACTGCTGCTTGTGCAAAGCCACCAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CCA 72 bp GAAAAGCAAGGACTGAGGAAGATACAGCAAGGCCACTaGTGGCTTTGCACAAGCAGCAGTGCAGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: EKQGLRKIQQGH*WLCTSSSAAWA
Trigger: TGCCCAGGCTGCACTGCTGCTTGTGCAAAGCCACCAGTGGCCTTGCTGTATCTTCCTCAGTCCTTGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CCA 72 bp CTGCAGAGCCTTAAACTGCCTAGAGTCAAACTACTCTaGGGCTCCATCACAGGAGCCAGGAAAGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: LQSLKLPRVKLL*GSITGARKAGS
Trigger: GGACCCTGCTTTCCTGGCTCCTGTGATGGAGCCCCAGAGTAGTTTGACTCTAGGCAGTTTAAGGCTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518290.1
CDS CAA 72 bp CTGCTGGTCTCCTGCTTCAGAAGGTTGGGCTTGGATTaGCCTTTGAATCCTGCTTTCCACAGGGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: LLVSCFRRLGLD*PLNPAFHRAVL
Trigger: GAGGACTGCCCTGTGGAAAGCAGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAAGCAGGAGACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000518789.5
ENST00000520381.5
ENST00000522878.5
CDS CCA 72 bp GGACCCCGCATCCCAATGCGAATTGGGCTAGAAATGTaGGGCTGGATTCGAAGCCTCATACTTACCCTATTA +
Preference number: 6 (lower is better)
Translates to: GPRIPMRIGLEM*GWIRSLILTLL
Trigger: TAATAGGGTAAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS GCA 72 bp CAACTTAAACATGGGCCTCACATGCTCCAAATGTGTTaGACTTGTAAAGGGTGCCTGAACATGGCTCACGGC +
Preference number: 6 (lower is better)
Translates to: QLKHGPHMLQMC*TCKGCLNMAHG
Trigger: GCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS TCA 72 bp GTCGCCAGGTCAACAGCGCATGTGGGATTGTGGTTTTaGAGATATCCAGTGTGCAGTTGCAAGTTTTATCCC +
Preference number: 6 (lower is better)
Translates to: VARSTAHVGLWF*RYPVCSCKFYP
Trigger: GGGATAAAACTTGCAACTGCACACTGGATATCTTCAAAACCACAATCCCACATGCGCTGTTGACCTGGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 72 bp GCTGACTTCTTCATTAACAGCAGACGCAGAAACCAGTaGTGCTTGTGGTCTGTTATCCACAGACCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: ADFFINSRRRNQ*CLWSVIHRPWL
Trigger: CAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 90 bp AAGGCATCTTATGTAAAGGTGAAACAGCCCGTATGGAGGCACATTTaGTTTGTGCTCAGCCATCAGCATCTGCTGCTTACAAAACGGAGC +
Preference number: 6 (lower is better)
Translates to: KASYVKVKQPVWRHI*FVLSHQHLLLTKRS
Trigger: GCTCCGTTTTGTAAGCAGCAGATGCTGATGGCTGAGCACAAACAAAATGTGCCTCCATACGGGCTGTTTCACCTTTACATAAGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS CCA 72 bp GGGAAGGCATCTTATGTAAAGGTGAAACAGCCCGTATaGAGGCACATTTTGTTTGTGCTCAGCCATCAGCAT +
Preference number: 6 (lower is better)
Translates to: GKASYVKVKQPV*RHILFVLSHQH
Trigger: ATGCTGATGGCTGAGCACAAACAAAATGTGCCTCCATACGGGCTGTTTCACCTTTACATAAGATGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS CCA 72 bp CGCATCCCAATGCGAATTGGGCTAGAAATGTGGGGCTaGATTCGAAGCCTCATACTTACCCTATTATCACTT +
Preference number: 6 (lower is better)
Translates to: RIPMRIGLEMWG*IRSLILTLLSL
Trigger: AAGTGATAATAGGGTAAGTATGAGGCTTCGAATCCAGCCCCACATTTCTAGCCCAATTCGCATTGGGATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518230.5
ENST00000518290.1
CDS CAA 72 bp ACATGGCTCACGGCCTCCATGAGTGCTTTAGCTGTCTaGGCCATCTGCTCCATTTCTAAGTTATACAGAAGT +
Preference number: 6 (lower is better)
Translates to: TWLTASMSALAV*AICSISKLYRS
Trigger: ACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS TCA 72 bp CCAACTAGCCCTAAACCCACAAATTCATCAGGAGCCTaGTCTTTTGTTCCAGTAAGAGATCCTTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: PTSPKPTNSSGA*SFVPVRDPSLP
Trigger: AGGCAGAGAAGGATCTCTTACTGGAACAAAAGATCAGGCTCCTGATGAATTTGTGGGTTTAGGGCTAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp AGCTGCATTGCACGCAAATTCAGACAAACACTTCACTaGATCCTGGAAAGAATCAATGGTCGCTGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: SCIARKFRQTLH*ILERINGRWKV
Trigger: CACTTTCCAGCGACCATTGATTCTTTCCAGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp GACTTCTTCATTAACAGCAGACGCAGAAACCAGTGGTaGTTGTGGTCTGTTATCCACAGACCTTGGTTGAAT +
Preference number: 6 (lower is better)
Translates to: DFFINSRRRNQW*LWSVIHRPWLN
Trigger: ATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 72 bp GCTCTGTGTCATCCTGAAGACTTTTATCTACATCATTaGTATGGAGGTCAAGGTCCCCTTCGTGTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: ALCHPEDFYLHH*YGGQGPLRVLG
Trigger: CCCAAGAACACGAAGGGGACCTTGACCTCCATACAAATGATGTAGATAAAAGTCTTCAGGATGACACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CAA 72 bp TTGGGCAATATCTTCAGGTGTGGTGCCAAGCATCCCTaGTTCTTGGAGGTACTGTATTCCTCTCTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: LGNIFRCGAKHP*FLEVLYSSLWF
Trigger: AAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS CAA 72 bp CGAATTGCTTCCATACTTGTGTCTGGGAAAGCTGCATaGCACGCAAATTCAGACAAACACTTCACTGCATCC +
Preference number: 6 (lower is better)
Translates to: RIASILVSGKAA*HANSDKHFTAS
Trigger: GGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS TCA 72 bp TTCACTCCAGTTCCTATAAGCTGTGCCAGCTCCAACTaGCTGATGCACTTCAGAATCTCATGCCATGAATTT +
Preference number: 6 (lower is better)
Translates to: FTPVPISCASSN*LMHFRISCHEF
Trigger: AAATTCATGGCATGAGATTCTGAAGTGCATCAGTCAGTTGGAGCTGGCACAGCTTATAGGAACTGGAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp CTTGATGTAAGAATTGGGCAATATCTTCAGGTGTGGTaGCAAGCATCCCTTGTTCTTGGAGGTACTGTATTC +
Preference number: 6 (lower is better)
Translates to: LDVRIGQYLQVW*QASLVLGGTVF
Trigger: GAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS GCA 72 bp ACGGCCTCCATGAGTGCTTTAGCTGTCTTGGCCATCTaGTCCATTTCTAAGTTATACAGAAGTCTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: TASMSALAVLAI*SISKLYRSLLC
Trigger: ACAAAGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS GCA 72 bp GAATTGCTTCCATACTTGTGTCTGGGAAAGCTGCATTaGACGCAAATTCAGACAAACACTTCACTGCATCCT +
Preference number: 6 (lower is better)
Translates to: ELLPYLCLGKLH*TQIQTNTSLHP
Trigger: AGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp AAGTCGAATTGCTTCCATACTTGTGTCTGGGAAAGCTaGATTGCACGCAAATTCAGACAAACACTTCACTGC +
Preference number: 6 (lower is better)
Translates to: KSNCFHTCVWES*IARKFRQTLHC
Trigger: GCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp CTTCAGAAGGTTGGGCTTGGATTTGCCTTTGAATCCTaGAGAAAAGGGAAGTTTCTGGGATTAGTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: LQKVGLGFAFES*RKGKFLGLVWE
Trigger: TTCCCAAACTAATCCCAGAAACTTCCCTTTTCTGCAGGATTCAAAGGCAAATCCAAGCCCAACCTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517955.2
ENST00000518290.1
CDS CCA 72 bp TTCATTAACAGCAGACGCAGAAACCAGTGGTGCTTGTaGTCTGTTATCCACAGACCTTGGTTGAATAGAATC +
Preference number: 6 (lower is better)
Translates to: FINSRRRNQWCL*SVIHRPWLNRI
Trigger: GATTCTATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 72 bp TTGATTTCACTGGTGGAAGGGTGCTTGATCCAGCTTTaGCTTCTCCATGAGGAGGACTCTGTTTTTCAGTTT +
Preference number: 6 (lower is better)
Translates to: LISLVEGCLIQL*LLHEEDSVFQF
Trigger: AAACTGAAAAACAGAGTCCTCCTCATGGAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCAGTGAAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CAA 72 bp TCTTCTTTCTTACTTGTGGCTGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGTTCCAGCTGCACAACA +
Preference number: 6 (lower is better)
Translates to: SSFLLVAGKKTM*SIVWMSSSCTT
Trigger: TGTTGTGCAGCTGGAACTCATCCAGACTATCGACAACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
ENST00000522878.5
CDS CAA 90 bp CAACAACACTCTGAGAACTGGTTTCTCCAATGGATTCCTGAATACTaGCTATCTGTTTCCAGTCCACATTTCCTCCAACTAGCCCTAAAC +
Preference number: 6 (lower is better)
Translates to: QQHSENWFLQWIPEY*LSVSSPHFLQLALN
Trigger: GTTTAGGGCTAGTTGGAGGAAATGTGGACTGGAAACAGATAGCAAGTATTCAGGAATCCATTGGAGAAACCAGTTCTCAGAGTGTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 90 bp CGAATAAGTCGAATTGCTTCCATACTTGTGTCTGGGAAAGCTGCATaGCACGCAAATTCAGACAAACACTTCACTGCATCCTGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: RISRIASILVSGKAA*HANSDKHFTASWKE
Trigger: TTCTTTCCAGGATGCAGTGAAGTGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS TCA 72 bp TGTTGTGATGTTAAAAAGCGGTACATTCCTTGGTCTTaGGTATCAACGCGAACATCAAAGTCCACCGCATCT +
Preference number: 6 (lower is better)
Translates to: CCDVKKRYIPWS*VSTRTSKSTAS
Trigger: AGATGCGGTGGACTTTGATGTTCGCGTTGATACTCAAGACCAAGGAATGTACCGCTTTTTAACATCACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000518789.5
ENST00000520381.5
ENST00000522878.5
CDS GCA 72 bp ACCATCCTCTATAGTTCCAATGTTGCCATCTGCACTTaGATTTATAGTAGTCCCTTCTCCCATATCTCCAAC +
Preference number: 6 (lower is better)
Translates to: TILYSSNVAICT*IYSSPFSHISN
Trigger: GTTGGAGATATGGGAGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS GCA 72 bp GTCACTACCATCCTCTATAGTTCCAATGTTGCCATCTaGACTTGCATTTATAGTAGTCCCTTCTCCCATATC +
Preference number: 6 (lower is better)
Translates to: VTTILYSSNVAI*TCIYSSPFSHI
Trigger: GATATGGGAGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS GCA 72 bp GCAAGCTCCCCTTTCTCTAAGAACTTCATTGACAACTaGCTCAAGGAGTCTACTGCAAAAATAGCTACATCT +
Preference number: 6 (lower is better)
Translates to: ASSPFSKNFIDN*LKESTAKIATS
Trigger: AGATGTAGCTATTTTTGCAGTAGACTCCTTGAGGCAGTTGTCAATGAAGTTCTTAGAGAAAGGGGAGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 72 bp TCTAGAGATGTACTAACTATGCGAGGACATTTGGACTaGCATGCCAACTCAAAAGGCAAGAAGTACTTGTCT +
Preference number: 6 (lower is better)
Translates to: SRDVLTMRGHLD*HANSKGKKYLS
Trigger: AGACAAGTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CCA 72 bp ATGGCGAATAAGTCGAATTGCTTCCATACTTGTGTCTaGGAAAGCTGCATTGCACGCAAATTCAGACAAACA +
Preference number: 6 (lower is better)
Translates to: MANKSNCFHTCV*ESCIARKFRQT
Trigger: TGTTTGTCTGAATTTGCGTGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 72 bp AAGCAATCTAGAGATGTACTAACTATGCGAGGACATTaGGACTGGCATGCCAACTCAAAAGGCAAGAAGTAC +
Preference number: 6 (lower is better)
Translates to: KQSRDVLTMRGH*DWHANSKGKKY
Trigger: GTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CAA 72 bp ATCATTTGTATGGAGGTCAAGGTCCCCTTCGTGTTCTaGGGATATATGATCAACAGTCTGAGGTGGCAAATA +
Preference number: 6 (lower is better)
Translates to: IICMEVKVPFVF*GYMINSLRWQI
Trigger: TATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAACACGAAGGGGACCTTGACCTCCATACAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CAA 72 bp TTGAATCCTGCTTTCCACAGGGCAGTCCTCTGTTCGTaGTTGGAATTAAACGCTTTTGCAAATCTATGTGAC +
Preference number: 6 (lower is better)
Translates to: LNPAFHRAVLCS*LELNAFANLCD
Trigger: GTCACATAGATTTGCAAAAGCGTTTAATTCCAACAACGAACAGAGGACTGCCCTGTGGAAAGCAGGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000518789.5
ENST00000520381.5
ENST00000522878.5
CDS CAA 72 bp TCTTCTTTCTTACTTGTGGCTGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGTTCCAGTTGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: SSFLLVAGKKTM*SIVWMSSSCCR
Trigger: TCTACAGCAACTGGAACTCATCCAGACTATCGACAACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518789.5
CDS CAA 90 bp AGTTTCTGTAAGCAATCTAGAGATGTACTAACTATGCGAGGACATTaGGACTGGCATGCCAACTCAAAAGGCAAGAAGTACTTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: SFCKQSRDVLTMRGH*DWHANSKGKKYLSA
Trigger: AGCAGACAAGTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000519436.1
CDS CAA 90 bp TGCCAGACATCTGTGTACTGTAGCTGCCTATTCCTGATGATGATGTaGACTCCAGGGAATTTAAACTTCCGTATCTGTTTATTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: CQTSVYCSCLFLMMM*TPGNLNFRICLLSQ
Trigger: CTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS CAA 90 bp TTTGCTGACTTCTTCATTAACAGCAGACGCAGAAACCAGTGGTGCTaGTGGTCTGTTATCCACAGACCTTGGTTGAATAGAATCATGAAT +
Preference number: 6 (lower is better)
Translates to: FADFFINSRRRNQWC*WSVIHRPWLNRIMN
Trigger: ATTCATGATTCTATTCAACCAAGGTCTGTGGATAACAGACCACAAGCACCACTGGTTTCTGCGTCTGCTGTTAATGAAGAAGTCAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp ATATGCATCTCTCTCCAGCTGAATGCTGAAAATGCATaGAATTCTGATTGCACATCTTATACCTTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: ICISLQLNAENA*NSDCTSYTFQA
Trigger: TGCCTGGAAGGTATAAGATGTGCAATCAGAATTGCATGCATTTTCAGCATTCAGCTGGAGAGAGATGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS GCA 72 bp CAATGTGCCCGGTTGTTTGGAATGCAAGTTCCACTATaGTTTCATCTTGATCAGATGCAGCTAGATGAAATA +
Preference number: 6 (lower is better)
Translates to: QCARLFGMQVPL*FHLDQMQLDEI
Trigger: TATTTCATCTAGCTGCATCTGATCAAGATGAAAGCATAGTGGAACTTGCATTCCAAACAACCGGGCACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp AGACACATATTTTGCACAATGGCGAATAAGTCGAATTaGTTCCATACTTGTGTCTGGGAAAGCTGCATTGCA +
Preference number: 6 (lower is better)
Translates to: RHIFCTMANKSN*FHTCVWESCIA
Trigger: TGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAATATGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 72 bp GCAGAATGGATAGAAGTAACTGCAATGAAAGAATCTTaGATCGTAGTTCATGAGACTTTGGATCTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: AEWIEVTAMKES*IVVHETLDLVV
Trigger: GACCACCAGATCCAAAGTCTCATGAACTACGATCCAAGATTCTTTCATTGCAGTTACTTCTATCCATTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CAA 72 bp TCTGAGAACTGGTTTCTCCAATGGATTCCTGAATACTaGCTATCTGTTTCCAGTCCACATTTCCTCCAACTA +
Preference number: 6 (lower is better)
Translates to: SENWFLQWIPEY*LSVSSPHFLQL
Trigger: TAGTTGGAGGAAATGTGGACTGGAAACAGATAGCAAGTATTCAGGAATCCATTGGAGAAACCAGTTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CAA 90 bp TTTTCTGCATCTTCTTTCTTACTTGTGGCTGGGAAGAAGACAATGTaGTCGATAGTCTGGATGAGTTCCAGCTGCACAACACATTTAATC +
Preference number: 6 (lower is better)
Translates to: FSASSFLLVAGKKTM*SIVWMSSSCTTHLI
Trigger: GATTAAATGTGTTGTGCAGCTGGAACTCATCCAGACTATCGACAACATTGTCTTCTTCCCAGCCACAAGTAAGAAAGAAGATGCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
ENST00000522878.5
CDS CAA 90 bp GATTTGCCTTTGAATCCTGCTTTCCACAGGGCAGTCCTCTGTTCGTaGTTGGAATTAAACGCTTTTGCAAATCTATGTGACTCTAATAAG +
Preference number: 6 (lower is better)
Translates to: DLPLNPAFHRAVLCS*LELNAFANLCDSNK
Trigger: CTTATTAGAGTCACATAGATTTGCAAAAGCGTTTAATTCCAACAACGAACAGAGGACTGCCCTGTGGAAAGCAGGATTCAAAGGCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000518789.5
ENST00000520381.5
ENST00000522878.5
CDS CAA 90 bp TTTATCTACATCATTTGTATGGAGGTCAAGGTCCCCTTCGTGTTCTaGGGATATATGATCAACAGTCTGAGGTGGCAAATATCTAAGTTG +
Preference number: 6 (lower is better)
Translates to: FIYIICMEVKVPFVF*GYMINSLRWQISKL
Trigger: CAACTTAGATATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAACACGAAGGGGACCTTGACCTCCATACAAATGATGTAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS GCA 72 bp AGATCGAATGTTAGCAGCTTGAGAATTAACCATCTGTaGTATACACCGTACAACCATATCTCGAATTGTTGG +
Preference number: 6 (lower is better)
Translates to: RSNVSSLRINHL*YTPYNHISNCW
Trigger: CCAACAATTCGAGATATGGTTGTACGGTGTATAGCACAGATGGTTAATTCTCAAGCTGCTAACATTCGATCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp TTCCTTGAAAGCCTGAGGTCTATCAGACACATATTTTaGACAATGGCGAATAAGTCGAATTGCTTCCATACT +
Preference number: 6 (lower is better)
Translates to: FLESLRSIRHIF*TMANKSNCFHT
Trigger: AGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAATATGTGTCTGATAGACCTCAGGCTTTCAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS GCA 72 bp ACTGCAGGGAAAATGAATTTCTCCATTAGTAGTGATTaGAAACTGCAGAGCCTTAAACTGCCTAGAGTCAAA +
Preference number: 6 (lower is better)
Translates to: TAGKMNFSISSD*KLQSLKLPRVK
Trigger: TTTGACTCTAGGCAGTTTAAGGCTCTGCAGTTTGCAATCACTACTAATGGAGAAATTCATTTTCCCTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518290.1
CDS CAA 72 bp TTTTCACTGTCACTACCATCCTCTATAGTTCCAATGTaGCCATCTGCACTTGCATTTATAGTAGTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: FSLSLPSSIVPM*PSALAFIVVPS
Trigger: AGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGTAGTGACAGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262215.8
CDS CAA 72 bp TCTGTGTACTGTAGCTGCCTATTCCTGATGATGATGTaGACTCCAGGGAATTTAAACTTCCGTATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: SVYCSCLFLMMM*TPGNLNFRICL
Trigger: TAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262215.8
ENST00000520381.5
CDS CCA 72 bp CATACGTTTCACATGTACAGTTCAATTGCTATACTTTaGCTGTATCTTCACAGTAGTTCCTTCATCTCTGAA +
Preference number: 6 (lower is better)
Translates to: HTFHMYSSIAIL*LYLHSSSFISE
Trigger: TTCAGAGATGAAGGAACTACTGTGAAGATACAGCCAAAGTATAGCAATTGAACTGTACATGTGAAACGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518290.1
CDS CAA 72 bp TGTGGGATTGTGGTTTTGAAGATATCCAGTGTGCAGTaGCAAGTTTTATCCCAGATTTCTAGGGTAAATTTT +
Preference number: 6 (lower is better)
Translates to: CGIVVLKISSVQ*QVLSQISRVNF
Trigger: AAAATTTACCCTAGAAATCTGGGATAAAACTTGCAACTGCACACTGGATATCTTCAAAACCACAATCCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5
CDS CCA 72 bp TTCATTATATGTTCAAAAGGTCTTAAGAAATCCTTCTaGAATCTGAAGTTAGCAAGCTCCCCTTTCTCTAAG +
Preference number: 6 (lower is better)
Translates to: FIICSKGLKKSF*NLKLASSPFSK
Trigger: CTTAGAGAAAGGGGAGCTTGCTAACTTCAGATTCCAGAAGGATTTCTTAAGACCTTTTGAACATATAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262215.8
ENST00000518230.5
ENST00000520381.5