RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFGAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149182

Ensembl transcript IDs: ENST00000395449.7, ENST00000426335.6, ENST00000524586.1, ENST00000524727.5, ENST00000524782.6, ENST00000525314.5, ENST00000525398.5, ENST00000525635.1, ENST00000526185.5, ENST00000526342.5, ENST00000526948.1, ENST00000527097.5, ENST00000527776.5, ENST00000527927.5, ENST00000528041.5, ENST00000528072.1, ENST00000528444.5, ENST00000528708.5, ENST00000529439.5, ENST00000529455.5, ENST00000529599.5, ENST00000530596.5, ENST00000530794.1, ENST00000531750.5, ENST00000532438.5, ENST00000532478.5, ENST00000533243.5, ENST00000533939.5, ENST00000627920.2, ENST00000629231.2

Found 887 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAGGCAGGGGGC +
Preference number: 1 (lower is better)
Translates to: SGCARPLLSVDGAGC*VPEGSVAGASQAGG
Trigger: GCCCCCTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR GCA 90 bp TGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: CSGCARPLLSVDGAG*WVPEGSVAGASQAG
Trigger: CCCTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR GCA 90 bp CATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTTCTCTGCCACCTGAGCCTGCCGCTC +
Preference number: 1 (lower is better)
Translates to: HGGDHGLLRLLLGIG*LLLTELLCHLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR CCA 90 bp ACTGCCGGTGCGGCAGGGGAAGATGGCACCAAGAATGACAGTGCTTaGCTCAGCTGCCAGAGGGTGAGGCCCACAGCTCTCACTGGCGGG +
Preference number: 1 (lower is better)
Translates to: TAGAAGEDGTKNDSA*LSCQRVRPTALTGG
Trigger: CCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTTGGTGCCATCTTCCCCTGCCGCACCGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 90 bp AGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCTGAG +
Preference number: 1 (lower is better)
Translates to: RPDAWRRPWTPPPAS*HRLPAAHGASLPPE
Trigger: CTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 90 bp TGGCTCAGCTGCCAGAGGGTGAGGCCCACAGCTCTCACTGGCGGGTaGTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: WLSCQRVRPTALTGG*CPGQAQNDAEEGAQ
Trigger: CTGAGCTCCTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCAGCTGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR GCA 90 bp GCGGCAGGGGAAGATGGCACCAAGAATGACAGTGCTTGGCTCAGCTaGCAGAGGGTGAGGCCCACAGCTCTCACTGGCGGGTGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: AAGEDGTKNDSAWLS*QRVRPTALTGGCCP
Trigger: TGGACAGCACCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTTGGTGCCATCTTCCCCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 90 bp CCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATaGGACGGGTCTACAGTGAACTCCTTCCAGGCCTCCCCCTGGTTC +
Preference number: 1 (lower is better)
Translates to: PLAAAAAASPQPLSP*DGSTVNSFQASPWF
Trigger: GAACCAGGGGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 90 bp ATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTaGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAA +
Preference number: 1 (lower is better)
Translates to: MLAQLGFLAPQSKQA*VEAAMSESSGAPSK
Trigger: TTTACTCGGGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR TCA 90 bp AAGATGGCACCAAGAATGACAGTGCTTGGCTCAGCTGCCAGAGGGTaGGGCCCACAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCC +
Preference number: 1 (lower is better)
Translates to: KMAPRMTVLGSAARG*GPQLSLAGAVQAKP
Trigger: GGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTTGGTGCCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR GCA 90 bp CGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTCAATCTCACTGAAGCTCTGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RLLLGIGCLLLTELL*HLSLPLNLTEALAA
Trigger: AGCAGCCAGAGCTTCAGTGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 90 bp GCAGGGGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATAT +
Preference number: 1 (lower is better)
Translates to: AGGSVPCLARAALPS*RIFSRYIWAARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR TCA 90 bp CTGCTCCGTGAGCTCCATCCATGTCCCCAAAGAGGTCTGAAGAGCTaGTGGCACTGCTGCCTGAGAGCTGCTGCAGCCGAGACCTGGCCT +
Preference number: 1 (lower is better)
Translates to: LLRELHPCPQRGLKS*WHCCLRAAAAETWP
Trigger: AGGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGACATGGATGGAGCTCACGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 90 bp CCAAAGAGGTCTGAAGAGCTGATGGCACTGCTGCCTGAGAGCTGCTaGAGCCGAGACCTGGCCTCATACTCTGCATCCACCTCCCGCCCA +
Preference number: 1 (lower is better)
Translates to: PKRSEELMALLPESC*SRDLASYSASTSRP
Trigger: TGGGCGGGAGGTGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGACCTCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 90 bp TCCCCAAAGAGGTCTGAAGAGCTGATGGCACTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCCTCATACTCTGCATCCACCTCCCGC +
Preference number: 1 (lower is better)
Translates to: SPKRSEELMALLPES*CSRDLASYSASTSR
Trigger: GCGGGAGGTGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CCA 90 bp TTTCCAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTaGCACCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCC +
Preference number: 1 (lower is better)
Translates to: FPALGNAQTKVLPLS*HPEEATGSSSSSKS
Trigger: GGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 90 bp GTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGCTaGGCTGAGACTGCCGGTGCGGCAGGGGAAGATGGCACCAAGAAT +
Preference number: 1 (lower is better)
Translates to: VCVAWEPNLQPKGGG*AETAGAAGEDGTKN
Trigger: ATTCTTGGTGCCATCTTCCCCTGCCGCACCGGCAGTCTCAGCCCAGCCCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR TCA 90 bp TTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCACTGAAGCTCTGGCTGCTCACCTTC +
Preference number: 1 (lower is better)
Translates to: FLASAACCSRSFSAT*ACRSISLKLWLLTF
Trigger: GAAGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR CCA 90 bp GCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: ARAALPSCRIFSRYI*AARLLYLVLASLAV
Trigger: CACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR TCA 90 bp GGGGGCAGGACAGAAGGACAAGAGTCTAACACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCAGTCCACAGGCAGAGGACAAGGGCT +
Preference number: 1 (lower is better)
Translates to: GGRTEGQESNTRRVV*EGIKGSVHRQRTRA
Trigger: AGCCCTTGTCCTCTGCCTGTGGACTGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGTGTTAGACTCTTGTCCTTCTGTCCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR TCA 90 bp AGCGGTGCACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGG +
Preference number: 1 (lower is better)
Translates to: SGAPRNSQCTRKHRT*CWPNSDSWRRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR GCA 90 bp ATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATAT +
Preference number: 1 (lower is better)
Translates to: IQRSVPCLARAALPS*RIFSRYIWAARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR CCA 90 bp CCTCCCCAGCTTCCACAAGGCAAAGCATCCCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCACAGAGC +
Preference number: 1 (lower is better)
Translates to: PPQLPQGKASPAWEL*SSCCRHHRKPESQS
Trigger: GCTCTGTGACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTTGTGGAAGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
3UTR GCA 90 bp CCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTaGTTAAACTGGGCAATGTCCGCTGTAGGCAGCACGTTCCCCAGA +
Preference number: 1 (lower is better)
Translates to: PLASTAIFPATDLTP*LNWAMSAVGSTFPR
Trigger: TCTGGGGAACGTGCTGCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR TCA 90 bp CCAAAGAACATGTCAGATGAGATGGCTTTGGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCGAGGCCTGAGCTCCGGCTCTCCACT +
Preference number: 1 (lower is better)
Translates to: PKNMSDEMALAPANF*RASLDSRPELRLST
Trigger: AGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 90 bp AACTCTGTGGACCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTGATG +
Preference number: 1 (lower is better)
Translates to: NSVDLMKLRWTPRER*TPEQSMHKKTPYVM
Trigger: CATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGGTCCACAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR TCA 90 bp GGCCTCATACTCTGCATCCACCTCCCGCCCAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGCGAATTTCTGACGCGCCTCACTAGA +
Preference number: 1 (lower is better)
Translates to: GLILCIHLPPKEHVR*DGFGSCEFLTRLTR
Trigger: TCTAGTGAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTTGGGCGGGAGGTGGATGCAGAGTATGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CCA 90 bp GTAACAAATCCTCCCCAGCTTCCACAAGGCAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: VTNPPQLPQGKASPA*ELWSSCCRHHRKPE
Trigger: CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTTGTGGAAGCTGGGGAGGATTTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
3UTR CCA 90 bp ATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTG +
Preference number: 1 (lower is better)
Translates to: IVKQVQLRARGFCTH*GFLLNHLHLRQHGV
Trigger: CACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR CCA 90 bp AGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTaGGCAATGTCCGCTGTAGGCAGCACGTTCCCCAGAGATACACTT +
Preference number: 1 (lower is better)
Translates to: STAIFPATDLTPCLN*AMSAVGSTFPRDTL
Trigger: AAGTGTATCTCTGGGGAACGTGCTGCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 90 bp GAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTaGTCTCGCTTCTTCCCTTCCAGATTCTGTAGCTTCTTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: ETELRDTKPMPNLSA*SRFFPSRFCSFFSS
Trigger: AGAGGAAAAGAAGCTACAGAATCTGGAAGGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGACACCCTGAAACAATCTTCCAAGTG +
Preference number: 1 (lower is better)
Translates to: EGIKNVTEGPAFHSR*YRGTLRHPETIFQV
Trigger: CACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR TCA 90 bp TTCACTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTaGCACCACTTTGTTTCAATACAAACAGTCCAGAAAGAAAGTCAA +
Preference number: 1 (lower is better)
Translates to: FTQTNREPGPAGALF*HHFVSIQTVQKESQ
Trigger: TTGACTTTCTTTCTGGACTGTTTGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGCGCATCCCAGGCAGGGGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCGGGTGGAGGCGGCGATaGGCGAATCGTCAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: GASQAGGSVPCLARAALPGWRRR*ANRQGP
Trigger: GGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCC...GGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCCTGCCTGGGATGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR GCA 90 bp CGCATCCCAGGCAGGGGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 2 (lower is better)
Translates to: RIPGRGISAMPSQGRTPQAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...CTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCCTGCCTGGGATGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR GCA 90 bp GGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 2 (lower is better)
Translates to: GRTPQLPDLLPVHLGSSATPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...AGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR TCA 90 bp GATGGACGCCCAGGGAGCGGTGCACCCCGGAACAGTCAATGCACAAGAAAACACGGGTGGAGGCGGCGATaGGCGAATCGTCAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: DGRPGSGAPRNSQCTRKHGWRRR*ANRQGP
Trigger: GGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCC...GTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR GCA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGAGGCCAGATCACAGATaGCTCGGTGAGCCACTCTTG +
Preference number: 2 (lower is better)
Translates to: GAMLRLCQATALCRRGWLRPDHR*LGEPLL
Trigger: CAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCT...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR-3UTR CCA 90 bp CGCATCCCAGGCAGGGGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 2 (lower is better)
Translates to: RIPGRGISAMPSQGRTPQKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...CTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCCTGCCTGGGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR GCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGCTCTCACTGGCGGGTaGTGTCCAGGCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTALTGG*CPGQAQ
Trigger: CTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp TGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGCAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 2 (lower is better)
Translates to: CLARAALPSCRIFSRYIWQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...CCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR GCA 90 bp CTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: LLVGQTHGGDHGLLRLLLLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...AAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGCCCACAGCTCTCACTaGCGGGTGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTAHSSH*RVLSRP
Trigger: TGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 2 (lower is better)
Translates to: GISAMPSQGRTPQLPDLLPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...GAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR TCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp TTGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTCACAGATGCCTCGGTaGGCCACTCTTGAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: LGPCSGCARPLLSVDGAGSQMPR*ATLECV
Trigger: AACACACTCAAGAGTGGCTCACCGAGGCATCTGTGA...GCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR-3UTR CCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAGCCCACAGCTCTCACTaGCGGGTGCTGTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPAHSSH*RVLSRP
Trigger: TGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGC...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PCPYPRQHLYPSGSQSFPPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...GGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAGACAAGGGCTGGTACTaGCCATTCCCCTCACAGGAG +
Preference number: 2 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLADKGWY*PFPSQE
Trigger: CTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTC...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGTCGGTGAGCCACTCTTaGGTGTGTTCTGTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: GAMLRLCQATALCRRGWLSVSHS*VCSVKK
Trigger: TTTCTTCACAGAACACACTCAAGAGTGGCTCACCGA...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR-3UTR GCA 90 bp CTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: LYPVHTPGSICIPAGAKALTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...AGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAAGTGAGCAGCAGCTGTaGGGGCAGGACAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLASEQQL*GQDRRT
Trigger: TGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACT...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CAA 90 bp ATGCACAAGAAAACACCGTACGTGATGCTGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGAGC +
Preference number: 2 (lower is better)
Translates to: MHKKTPYVMLAQLGF*APQSKQAWVEAAMS
Trigger: GCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCTTGTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR TCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLTRRVV*EGIKGS
Trigger: TGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGT...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGGACGGGTCTACAGTaGACTCCTTCCAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGGTGLQ*TPSRPP
Trigger: GGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCC...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: GSFSSTLSIPQAASVSQRAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...CCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACAGAATAAGCCATCGTaGGGGAACCCCCTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLQNKPS*GNPLSQ
Trigger: CTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTATCCGCTTTCCCTACCTaGGGAAAGTCTGGACCCAGA +
Preference number: 2 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLSAFPT*GKSGPR
Trigger: TCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGA...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp AGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SFGIPSPCPTFLPALASSPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...GGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp TCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SFSSTLSIPQAASVSQREAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...CTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CTGGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 2 (lower is better)
Translates to: LAPSPLPCPYPRQHLYPSGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...GCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CATTGGCATTCCCGCCGACCTGCATACACCTCAGCTGGAACCAGTTCCAGTTGGCAGTCGAAACAGGCCTaGGTGGAGGCGGCGATGAGC +
Preference number: 2 (lower is better)
Translates to: HWHSRRPAYTSAGTSSSWQSKQA*VEAAMS
Trigger: GCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTG...CCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR TCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKTRRVV*EGIKGS
Trigger: TGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGGTATGGCAGGATAAGTaGGCAGCAGCTGTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: SRITADKTLHGHQPGEEGVWQDK*AAAVGA
Trigger: TGCCCCCACAGCTGCTGCTCACTTATCCTGCCATAC...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 2 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp CTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 2 (lower is better)
Translates to: LYPVHTPGSICIPAGAKASFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...AGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGCCTCTCACATCCTCTaGTTCCCTGGCCAGCATCAA +
Preference number: 2 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTASHIL*FPGQHQ
Trigger: TTGATGCTGGCCAGGGAAGCAGAGGATGTGAGAGGC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACACTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: TGVSCSITCISDSTEWETLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...TGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCAGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AASERILHSLGFPAQSPAASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...TGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GPEAKVPTSSNKSSCEREASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...CTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: DRASGYQAHAQPFCLLSLMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...AAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGAGTGAGCAGCAGCTGTaGGGGCAGGACAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGSEQQL*GQDRRT
Trigger: TGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACT...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGCAGCCTCTTTCCCCATaGGACGGGTCTACAGTGAAC +
Preference number: 2 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKQPLSP*DGSTVN
Trigger: GTTCACTGTAGACCCGTCCCATGGGGAAAGAGGCTG...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGCCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LPCPYPRQHLYPSGSQSFAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...AAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGGGACGGGTCTACAGTaGACTCCTTCCAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEGTGLQ*TPSRPP
Trigger: GGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 2 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp GCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGGGCAATGTCCGCTGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AIFPATDLTPCLNWAMSAASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...AGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR GCA 90 bp AGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: RQSFGIPSPCPTFLPALALASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...AGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GVQRRKYQHRQTSPAASELASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...CTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGAATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SLGFPAQSPASQTARSGRMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCACCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 2 (lower is better)
Translates to: VYPKISAMPSQGRTPQLPWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...CGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR CCA 90 bp GGCTCAGTGGCTGGCGCATCCCAGGCAGGGGGATCAGTGCCATGCCTAGCCAGGCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: GSVAGASQAGGSVPCLARLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...CCTGGCTAGGCATGGCACTGATCCCCCTGCCTGGGATGCGCCAGCCACTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR TCA 90 bp ATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: IGQHSHFPSHRLDTLLKLFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...CAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR TCA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 2 (lower is better)
Translates to: VQRRKYQHRQTSPAASERSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 2 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp GCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGAGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ARGFCTHWGFLLNHLHLRASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...TCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 2 (lower is better)
Translates to: SLGFPAQSPASQTARSGRLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCACTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 2 (lower is better)
Translates to: AASERILHSLGFPAQSPALLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...TGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp TGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: CEREDFALTGVSCSITCIMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...GATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp TGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: WGSRGESTNIVKQVQLRAHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...CGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCAGTGAGCAGCAGCTGTaGGGGCAGGACAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTISEQQL*GQDRRT
Trigger: TGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: WPASSSQHPESNHSRQDPPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CGCATCCCAGGCAGGGGGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 2 (lower is better)
Translates to: RIPGRGISAMPSQGRTPQYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...CTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCCTGCCTGGGATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529439.5
3UTR-3UTR CCA 90 bp AGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: SAMPSQGRTPQLPDLLPVLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...TACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR CCA 90 bp TGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: WGSRGESTNIVKQVQLRAISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...CGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LPCPYPRQHLYPSGSQSFISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...AAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: REDFALTGVSCSITCISDPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp GTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 2 (lower is better)
Translates to: VKQVQLRARGFCTHWGFLGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGTATGGCAGGATAAGTaGGCAGCAGCTGTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWVWQDK*AAAVGA
Trigger: TGCCCCCACAGCTGCTGCTCACTTATCCTGCCATAC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp AGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGGATGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: RQHLYPSGSQSFPLRKRDAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...ATCCCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp AGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGGGCAATGACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTC +
Preference number: 2 (lower is better)
Translates to: STAIFPATDLTPCLNWAMTRLEA*APALHF
Trigger: GAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGT...CATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR GCA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGTGTCACAGAGGGTCCTaGATTCCACAGCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: SRITADKTLHGHQPGEEGCHRGS*IPQQMV
Trigger: TACCATCTGCTGTGGAATGCAGGACCCTCTGTGACA...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp TTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: FGGPEAKVPTSSNKSSCELASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...CTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp TTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAGGCCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 2 (lower is better)
Translates to: FLFLTINLELLVGQTHGGLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...GCCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACACATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: TGVSCSITCISDSTEWETHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...TGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
3UTR-3UTR CCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: GPEAKVPTSSNKSSCEREPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...CTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGTACCTGGGGAAAGTCTaGACCCAGAATAAGCCATCG +
Preference number: 2 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGYLGKV*TQNKPS
Trigger: CGATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTA...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGA +
Preference number: 2 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGAFHSR*YRGTLR
Trigger: TCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGC...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGAAGAATGACAGTGCTTaGCTCAGCTGCCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRKNDSA*LSCQRV
Trigger: CACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTT...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: HRQTSPAASERILHSLGFAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 2 (lower is better)
Translates to: PAASERILHSLGFPAQSPSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...AGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp GTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 2 (lower is better)
Translates to: VQLRARGFCTHWGFLLNHSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR CAA 90 bp TTCATCACACCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTaGACACCCTGCTTAAACTGGGCAATGTCCGCTGTAGGCAGCACG +
Preference number: 2 (lower is better)
Translates to: FITPLASTAIFPATD*TPCLNWAMSAVGST
Trigger: CGTGCTGCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGGTGTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR TCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGACCCTGAGACACCCTaGAACAATCTTCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRDPETP*NNLPSA
Trigger: AGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 2 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp ACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: TSSNKSSCEREDFALTGVAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...AACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 2 (lower is better)
Translates to: REDFALTGVSCSITCISDAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp GCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 2 (lower is better)
Translates to: ASGYQAHAQPFCLLSLLPPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR GCA 90 bp ATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 2 (lower is better)
Translates to: IGQHSHFPSHRLDTLLKLLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...CAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR GCA 90 bp CATTGGCATTCCCGCCGACCTGCATACACCTCAGCTGGAACCAGTTCCAGTTGGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 2 (lower is better)
Translates to: HWHSRRPAYTSAGTSSSWPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCAGCCTCTTTCCCCATaGGACGGGTCTACAGTGAAC +
Preference number: 2 (lower is better)
Translates to: WPASSSQHPESNHSRQDPQPLSP*DGSTVN
Trigger: GTTCACTGTAGACCCGTCCCATGGGGAAAGAGGCTG...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGA +
Preference number: 2 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIAFHSR*YRGTLR
Trigger: TCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGC...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GTAGGAACCGTAGCGATCCTGCAAGGAATTCATCACACCATTGGCCAGCACAGCATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VGTVAILQGIHHTIGQHSISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...GCTGTGCTGGCCAATGGTGTGATGAATTCCTTGCAGGATCGCTACGGTTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CCA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: KYQHRQTSPAASERILHSPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...TGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 2 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 2 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 2 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 2 (lower is better)
Translates to: SLGFPAQSPASQTARSGRLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR GCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGAAGAGTGGTCTGTGTTaGTTGGGAGCCCAACCTACA +
Preference number: 2 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLKSGLC*LGAQPT
Trigger: TGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTT...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp AGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 2 (lower is better)
Translates to: SFGIPSPCPTFLPALASSPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...GGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR GCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp ACCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAAGATGGCTTTGGCTCCTaGGAATTTCTGACGCGCCTC +
Preference number: 2 (lower is better)
Translates to: TIGQHSHFPSHRLDTLLKDGFGS*EFLTRL
Trigger: GAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATC...TTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCACCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
3UTR-3UTR CCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACCCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: HRQTSPAASERILHSLGFISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp CTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 2 (lower is better)
Translates to: LPCPYPRQHLYPSGSQSFIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...AAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR TCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGACCCTGAGACACCCTaGAACAATCTTCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEDPETP*NNLPSA
Trigger: AGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGACCCTGAGACACCCTaGAACAATCTTCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWDPETP*NNLPSA
Trigger: AGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 2 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTELWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp CATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 2 (lower is better)
Translates to: HVVYPKISAMPSQGRTPQWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...CTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR GCA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGCCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 2 (lower is better)
Translates to: VQRRKYQHRQTSPAASERPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR GCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR GCA 90 bp AGCGATCCTGCAAGGAATTCATCACACCATTGGCCAGCACAGCCATTTTCCCAGCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SDPARNSSHHWPAQPFSQRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...CTGGGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTCCTTGCAGGATCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR GCA 90 bp ACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATCGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TSGQLGYYIWCWHHWLCIAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...GATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR TCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYTRRVV*EGIKGS
Trigger: TGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGT...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATAGCGCGTGCTACGGGTaGTTCTCAAGAAGGAAACGT +
Preference number: 2 (lower is better)
Translates to: GSSPGTSGQLGYYIWCWHSACYG*FSRRKR
Trigger: ACGTTTCCTTCTTGAGAATCACCCGTAGCACGCGCT...ATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
3UTR-3UTR GCA 90 bp AGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 2 (lower is better)
Translates to: RRKYQHRQTSPAASERILQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...CAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGACAGAATAAGCCATCGTaGGGGAACCCCCTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRQNKPS*GNPLSQ
Trigger: CTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTG...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGATCCGCTTTCCCTACCTaGGGAAAGTCTGGACCCAGA +
Preference number: 2 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRSAFPT*GKSGPR
Trigger: TCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGA...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CAA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACA +
Preference number: 2 (lower is better)
Translates to: KYQHRQTSPAASERI*HSLGFPAQSPASQT
Trigger: TGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CCA 90 bp TTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 2 (lower is better)
Translates to: LSIQRSVPCLARAALPSCYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...GCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR CCA 90 bp CACAGAGCTCGGATCAGTAGGAACCGTAGCGATCCTGCAAGGAATTCATCACACGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 2 (lower is better)
Translates to: HRARISRNRSDPARNSSHGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...GTGTGATGAATTCCTTGCAGGATCGCTACGGTTCCTACTGATCCGAGCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CAA 90 bp CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTaGTTTCAATACAAACAGTCCAGAAAGAAAGTCAAGTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PTGSQALQGLYFDTT*FQYKQSRKKVKSLW
Trigger: CCAGAGGGACTTGACTTTCTTTCTGGACTGTTTGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR GCA 90 bp GGAACGGCACTACTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 2 (lower is better)
Translates to: GTALLMLSIQRSVPCLARWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...CCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRKASPA*ELWSSC
Trigger: ACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR-3UTR CCA 90 bp CCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: PDLLPVHLGSSAIIFGVGLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...GCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR CCA 90 bp AGGAACGGCACTACTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 2 (lower is better)
Translates to: RNGTTHVVYPKISAMPSQFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...CTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR CAA 90 bp CTTCACTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTaGACACCACTTTGTTTCAATACAAACAGTCCAGAAAGAAAGTCA +
Preference number: 2 (lower is better)
Translates to: LHSDQQGARPCRGFI*TPLCFNTNSPERKS
Trigger: TGACTTTCTTTCTGGACTGTTTGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
3UTR-3UTR TCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTCTTGAGTGTGTTCTGTaGAGAAATCAGAGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVLECVL*RNQSPS
Trigger: AGAAGGACTCTGATTTCTTCACAGAACACACTCAAG...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR CCA 72 bp GCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAG +
Preference number: 3 (lower is better)
Translates to: ARPLLSVDGAGC*VPEGSVAGASQ
Trigger: CTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528041.5
ENST00000529439.5
3UTR GCA 72 bp TCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTACATCTGGGCAGCTCGG +
Preference number: 3 (lower is better)
Translates to: SVPCLARAALPS*RIFSRYIWAAR
Trigger: CCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR GCA 72 bp GCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGC +
Preference number: 3 (lower is better)
Translates to: ARRMEATMDSSA*FLASAACCSRS
Trigger: GCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 72 bp TGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCAGTGGCTGGCGCATCC +
Preference number: 3 (lower is better)
Translates to: CARPLLSVDGAG*WVPEGSVAGAS
Trigger: GGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR CCA 72 bp CAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTaGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCC +
Preference number: 3 (lower is better)
Translates to: QLGFLAPQSKQA*VEAAMSESSGA
Trigger: GGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR CCA 72 bp GCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: AWRRPWTPPPAS*HRLPAAHGASL
Trigger: CAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CAA 90 bp GCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: ASGYQAHAQPFCLLSLLPSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CAA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCCTCGGTGAGCCACTCTaGAGTGTGTTCTGTGAAGAA +
Preference number: 3 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCLGEPL*SVFCEE
Trigger: TTCTTCACAGAACACACTCAAGAGTGGCTCACCGAG...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
3UTR TCA 72 bp TCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCACTGAAGCTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: SAACCSRSFSAT*ACRSISLKLWL
Trigger: CAGCCAGAGCTTCAGTGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 72 bp TGCCAGAGGGTGAGGCCCACAGCTCTCACTGGCGGGTaGTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: CQRVRPTALTGG*CPGQAQNDAEE
Trigger: TTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 72 bp CTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTaGCACCCAGAAGAGGCCACTGGCAGCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LGNAQTKVLPLS*HPEEATGSSSS
Trigger: GCTGCTGCTGCTGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR TCA 72 bp TGCGAATTTCTGACGCGCCTCACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTCCCTCCGGTTTGTGGC +
Preference number: 3 (lower is better)
Translates to: CEFLTRLTRLEA*APALHFPPVCG
Trigger: GCCACAAACCGGAGGGAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGTGAGGCGCGTCAGAAATTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 72 bp GAAGATGGCACCAAGAATGACAGTGCTTGGCTCAGCTaGCAGAGGGTGAGGCCCACAGCTCTCACTGGCGGG +
Preference number: 3 (lower is better)
Translates to: EDGTKNDSAWLS*QRVRPTALTGG
Trigger: CCCGCCAGTGAGAGCTGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTTGGTGCCATCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR GCA 72 bp CTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTCAATCTCACTGAAGCT +
Preference number: 3 (lower is better)
Translates to: LGIGCLLLTELL*HLSLPLNLTEA
Trigger: AGCTTCAGTGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 72 bp TCTGAAGAGCTGATGGCACTGCTGCCTGAGAGCTGCTaGAGCCGAGACCTGGCCTCATACTCTGCATCCACC +
Preference number: 3 (lower is better)
Translates to: SEELMALLPESC*SRDLASYSAST
Trigger: GGTGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 72 bp AGGTCTGAAGAGCTGATGGCACTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCCTCATACTCTGCATCC +
Preference number: 3 (lower is better)
Translates to: RSEELMALLPES*CSRDLASYSAS
Trigger: GGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CAA 90 bp CTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LRARGFCTHWGFLLNHLHSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...ATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CAA 90 bp AGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTAGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 3 (lower is better)
Translates to: SAMPSQGRTPQLPDLLPVARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...TACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR CAA 90 bp ATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: ILHSLGFPAQSPASQTARSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...CCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 72 bp GACCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCG +
Preference number: 3 (lower is better)
Translates to: DLMKLRWTPRER*TPEQSMHKKTP
Trigger: CGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR CCA 72 bp CCTCCCCAGCTTCCACAAGGCAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGT +
Preference number: 3 (lower is better)
Translates to: PPQLPQGKASPA*ELWSSCCRHHR
Trigger: ACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTTGTGGAAGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
3UTR CCA 72 bp TCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGATACCAAGCCCATGCCC +
Preference number: 3 (lower is better)
Translates to: SCSITCISDSTE*ETELRDTKPMP
Trigger: GGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR TCA 72 bp CCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGATTCTTGGCGCCGCAGT +
Preference number: 3 (lower is better)
Translates to: PRNSQCTRKHRT*CWPNSDSWRRS
Trigger: ACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
3UTR TCA 72 bp ATGTCAGATGAGATGGCTTTGGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCGAGGCCTGAGCTCCGG +
Preference number: 3 (lower is better)
Translates to: MSDEMALAPANF*RASLDSRPELR
Trigger: CCGGAGCTCAGGCCTCGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CAA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR TCA 72 bp CTCTGCATCCACCTCCCGCCCAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGCGAATTTCTGACGCGC +
Preference number: 3 (lower is better)
Translates to: LCIHLPPKEHVR*DGFGSCEFLTR
Trigger: GCGCGTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTTGGGCGGGAGGTGGATGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR GCA 72 bp TGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTaGTCAATCACCTGCATCTCAGACAGCACGGAGTGG +
Preference number: 3 (lower is better)
Translates to: CEREDFALTGVS*SITCISDSTEW
Trigger: CCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR GCA 72 bp AGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTaGTTAAACTGGGCAATGTCCGCTGTAGGCAGCACG +
Preference number: 3 (lower is better)
Translates to: STAIFPATDLTP*LNWAMSAVGST
Trigger: CGTGCTGCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CCA 72 bp GCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATATTTGGTGTTGGCATCA +
Preference number: 3 (lower is better)
Translates to: ALPSCRIFSRYI*AARLLYLVLAS
Trigger: TGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR CCA 72 bp CATCCACCTCCCGCCCAAAGAACATGTCAGATGAGATaGCTTTGGCTCCTGCGAATTTCTGACGCGCCTCAC +
Preference number: 3 (lower is better)
Translates to: HPPPAQRTCQMR*LWLLRISDAPH
Trigger: GTGAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTTGGGCGGGAGGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR-3UTR CAA 90 bp CTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATCAAGAAGGAAACGTGTaGGCTGTAGGAGACATCTCC +
Preference number: 3 (lower is better)
Translates to: LPSCRIFSRYIWAARLLYQEGNV*AVGDIS
Trigger: GGAGATGTCTCCTACAGCCAACACGTTTCCTTCTTG...ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
3UTR-3UTR CAA 90 bp TATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 3 (lower is better)
Translates to: YPKISAMPSQGRTPQLPDARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...ATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
3UTR-3UTR CAA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: REDFALTGVSCSITCISDAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR CAA 90 bp AGGAACGGCACTACTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 3 (lower is better)
Translates to: RNGTTHVVYPKISAMPSQAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...CTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528708.5
3UTR-3UTR CAA 90 bp TCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SFSSTLSIPQAASVSQREPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...CTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
3UTR TCA 72 bp ACAGAAGGACAAGAGTCTAACACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCAGTCCACAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: TEGQESNTRRVV*EGIKGSVHRQR
Trigger: CCTCTGCCTGTGGACTGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGTGTTAGACTCTTGTCCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 72 bp CAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCACCTGCATCTCAGACAG +
Preference number: 3 (lower is better)
Translates to: QVQLRARGFCTH*GFLLNHLHLRQ
Trigger: CTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
3UTR-3UTR CAA 90 bp CCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 3 (lower is better)
Translates to: PQLPDLLPVHLGSSAIIFLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...AAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR-3UTR CAA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
3UTR-3UTR CAA 90 bp CCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 3 (lower is better)
Translates to: PDLLPVHLGSSAIIFGVGLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...GCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
3UTR TCA 72 bp GTCCTGCATTCCACAGCAGATGGTACAGAGGGACCCTaGGACACCCTGAAACAATCTTCCAAGTGCTTACTG +
Preference number: 3 (lower is better)
Translates to: VLHSTADGTEGP*DTLKQSSKCLL
Trigger: CAGTAAGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
3UTR CCA 72 bp AAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGACACCCTGAAACAATC +
Preference number: 3 (lower is better)
Translates to: KNVTEGPAFHSR*YRGTLRHPETI
Trigger: GATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGAGACACAACCGCGGCTaGCGGGTCCCGCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKRHNRG*RVPPRA
Trigger: GGCCCGCGGCGGGACCCGTCAGCCGCGGTTGTGTCT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTCCCTGAAGGCTCAGTaGCTGGCGCATCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCSLKAQ*LAHPRQ
Trigger: CTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGA...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp TTGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LGPCSGCARPLLSVDGAGDGAGC*VPEGSV
Trigger: CACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTC...GCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR TCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGAGACACAACCGCGGCTaGCGGGTCCCGCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGRHNRG*RVPPRA
Trigger: GGCCCGCGGCGGGACCCGTCAGCCGCGGTTGTGTCT...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AAACAGGCCTGGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAAGGGTGGAGGCGGCGATaGGCGAATCGTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KQAWVEAAMSESSGAPSKGWRRR*ANRQGP
Trigger: GGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCC...TTTACTCGGGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp CCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PSQGRTPQLPDLLPVHLGVDGAG*WVPEGS
Trigger: TGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTAC...GCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR TCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAGGTGGGGGCTGGGCTaGGACTGCCGGTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPRWGLG*DCRCGR
Trigger: CCTGCCGCACCGGCAGTCTCAGCCCAGCCCCCACCT...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CCGTCGCATTGGCATTCCCGCCGACCTGCATACACCTCAGCTGGAACCAGTTCCGGGTGGAGGCGGCGATaGGCGAATCGTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSHWHSRRPAYTSAGTSSGWRRR*ANRQGP
Trigger: GGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCC...GGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTGCGGGCCAGCCGAGGGGTaGGGTGATTGGAGTCCGATC +
Preference number: 4 (lower is better)
Translates to: QTHGGDHGLLRLLLGIGCGPAEG*GDWSPI
Trigger: GATCGGACTCCAATCACCCCACCCCTCGGCTGGCCC...GCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp CAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: QLGFLAPQSKQAWVEAAMTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp GGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GRTPQLPDLLPVHLGSSAAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...AGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp CTCAGTGGCTGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGAGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: LSGWRIPGRGLKRRPDHRAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...TCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCAGCCACTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCACTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLALLPES*CSRDLA
Trigger: GGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAG...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGTCCCTGAAGGCTCAGTaGCTGGCGCATCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CWPNSDSWRRSRNRPGWRSLKAQ*LAHPRQ
Trigger: CTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGA...CCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACATCCGATCTGGACCAATaGGCAGCCGGCGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTSDLDQ*AAGGTG
Trigger: CCCCGTCCCGCCGGCTGCCCATTGGTCCAGATCGGA...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp AGCCTGAGTCACAGAGCTCGGATCAGTAGGAACCGTAGCGATCCTGCAAGGAATAGACACAACCGCGGCTaGCGGGTCCCGCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SLSHRARISRNRSDPARNRHNRG*RVPPRA
Trigger: GGCCCGCGGCGGGACCCGTCAGCCGCGGTTGTGTCT...ATTCCTTGCAGGATCGCTACGGTTCCTACTGATCCGAGCTCTGTGACTCAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp CTCAGTGGCTGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGAGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSGWRIPGRGLKRRPDHRVDGAG*WVPEGS
Trigger: TGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTAC...TCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCAGCCACTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp TTGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCAGGCCAGATCACAGATaGCTCGGTGAGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LGPCSGCARPLLSVDGAGRPDHR*LGEPLL
Trigger: CAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCT...GCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCACAGGCCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCTGLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGT...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKDGAGC*VPEGSV
Trigger: CACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTC...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARRMEATMDSSACFLASAAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...AGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGGGGCCAGCCGAGGGGTaGGGTGATTGGAGTCCGATC +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKGPAEG*GDWSPI
Trigger: GATCGGACTCCAATCACCCCACCCCTCGGCTGGCCC...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGAT +
Preference number: 4 (lower is better)
Translates to: PSQGRTPQLPDLLPVHLGRKHRT*CWPNSD
Trigger: ATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCT...GCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR TCA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGTTCTTCTCTGGGGAGTaGTTAGGAACGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: GAMLRLCQATALCRRGWLFFSGE*LGTALL
Trigger: GAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAA...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR TCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGTGGCTGCTGGGTCCCTaGAGGCTCAGTGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGWLLGP*RLSGWR
Trigger: GCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCA...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR TCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACATTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTAGGTGGGGGCTGGGCTaGGACTGCCGGTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPRWGLG*DCRCGR
Trigger: CCTGCCGCACCGGCAGTCTCAGCCCAGCCCCCACCT...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp TTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: LSIQRSVPCLARAALPSCAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...GCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKVDGAG*WVPEGS
Trigger: TGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTAC...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACACTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp CCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PVHTPGSICIPAGAKAFPASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...GGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCCTGGCCTCATACTCTaGATCCACCTCCCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPPGLIL*IHLPPK
Trigger: TTTGGGCGGGAGGTGGATGCAGAGTATGAGGCCAGG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: ARRMEATMDSSACFLASAPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...AGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACACCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LLVGQTHGGDHGLLRLLLGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...AAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGCTGCAGCCGAGACCTaGCCTCATACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPAAAET*PHTLHP
Trigger: TGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCAGTGAGCAGCAGCTGTaGGGGCAGGACAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPSEQQL*GQDRRT
Trigger: TGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACT...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGCCCACAGCTCTCACTaGCGGGTGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGAHSSH*RVLSRP
Trigger: TGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGC...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp ACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCAGTCGAAACAGGCCTaGGTGGAGGCGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: TVRDAGPTRILGAAVETGQSKQA*VEAAMS
Trigger: GCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTG...GCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR TCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGTGGCTGCTGGGTCCCTaGAGGCTCAGTGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMWLLGP*RLSGWR
Trigger: GCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCA...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR TCA 90 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LWLLTFWAPRPFLAPSPFAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...GAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR TCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: LLVGQTHGGDHGLLRLLLSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...AAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTTRLEA*APALHF
Trigger: GAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGT...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGTCCCCAAAGAGGTCTaGAGAGCTGATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPVPKEV*RADGTA
Trigger: AGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGAC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAGCCGAGGGGTGGGGTaGTTGGAGTCCGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPSRGVG*LESDLD
Trigger: GTCCAGATCGGACTCCAATCACCCCACCCCTCGGCT...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCAAGGTGGGGGCTGGGCTaGGACTGCCGGTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPRWGLG*DCRCGR
Trigger: CCTGCCGCACCGGCAGTCTCAGCCCAGCCCCCACCT...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AACACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: NTVRDAGPTRILGAAVETAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...TGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp CCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: PRQHLYPSGSQSFPLRKRAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...CCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR GCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ASGYQAHAQPFCLLSLLPLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACCTGGCCTCATACTCTaGATCCACCTCCCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLPGLIL*IHLPPK
Trigger: TTTGGGCGGGAGGTGGATGCAGAGTATGAGGCCAGG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CATTGGCATTCCCGCCGACCTGCATACACCTCAGCTGGAACCAGTTCCAGTTGGGGGGGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: HWHSRRPAYTSAGTSSSWGGSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCC...CCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR GCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGCTCTCACTGGCGGGTaGTGTCCAGGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRALTGG*CPGQAQ
Trigger: CTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: GRTPQLPDLLPVHLGSSAWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...AGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp TTGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGPCSGCARPLLSVDGAGWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...GCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp CAGGCCTGGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAAGGCAGAGTCCTTCTTCTCTaGGGAGTGATTAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: QAWVEAAMSESSGAPSKGRVLLL*GVIRNG
Trigger: GCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCT...GCCTTTACTCGGGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528708.5
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGTCCCTGAAGGCTCAGTaGCTGGCGCATCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGSLKAQ*LAHPRQ
Trigger: CTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGA...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp ACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATAGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TPQLPDLLPVHLGSSAIIDGAGC*VPEGSV
Trigger: CACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTC...TATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGCAAGCAGGTCTGTGTTaGGGCCATGCTCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKQAGLC*GHAPAV
Trigger: CACAGCCGGAGCATGGCCCCAACACAGACCTGCTTG...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASGYQAHAQPFCLLSLLPPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPYPRQHLYPSGSQSFPAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...GGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PVHTPGSICIPAGAKAFPGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...GGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp TCCGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: SACFLASAACCSRSFSATSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...GGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAGCTGCAGCCGAGACCTaGCCTCATACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLAAAET*PHTLHP
Trigger: TGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGC...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGATTGGAGTCCGATCTaGACCAATGGGCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTDWSPI*TNGQPA
Trigger: CGCCGGCTGCCCATTGGTCCAGATCGGACTCCAATC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp GCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTGAGGGGTGGGGTGATTaGAGTCCGATCTGGACCAAT +
Preference number: 4 (lower is better)
Translates to: ARRMEATMDSSACFLASAEGWGD*SPIWTN
Trigger: ATTGGTCCAGATCGGACTCCAATCACCCCACCCCTC...AGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CAA 72 bp AAAACACCGTACGTGATGCTGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KTPYVMLAQLGF*APQSKQAWVEA
Trigger: CGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR TCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPTRLEA*APALHF
Trigger: GAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGT...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGACACTTCCTGCTCCGTaGGCTCCATCCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKTLPAP*APSMSP
Trigger: TGGGGACATGGATGGAGCTCACGGAGCAGGAAGTGT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGGGACGGGTCTACAGTaGACTCCTTCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRGTGLQ*TPSRPP
Trigger: GGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGGGACGGGTCTACAGTaGACTCCTTCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKGTGLQ*TPSRPP
Trigger: GGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCC...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: AGPTRILGAAVETGLGGGPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...GCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp CTGGAGCTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: LELLVGQTHGGDHGLLRLPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR GCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPETPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp AACACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: NTVRDAGPTRILGAAVETTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...TGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp GCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTACAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: ALPSCRIFSRYIWAARLLQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...TAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp GGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GVQRRKYQHRQTSPAASELTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...CTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp AGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SFGIPSPCPTFLPALASSASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...GGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCACATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLAHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LWLLTFWAPRPFLAPSPFHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...GAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAGATGGCTTTGGCTCCTaGGAATTTCTGACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLADGFGS*EFLTRL
Trigger: GAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATC...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGACTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRLLPES*CSRDLA
Trigger: GGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAG...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAGCCTCTCACATCCTCTaGTTCCCTGGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLASHIL*FPGQHQ
Trigger: TTGATGCTGGCCAGGGAAGCAGAGGATGTGAGAGGC...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATACAGGCCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PHSPAAGSSPGTSGQLGYTGLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGT...ATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CCA 90 bp CTCAGTGGCTGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGACGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSGWRIPGRGLKRRPDHRRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...TCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCAGCCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACACCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: PSQGRTPQLPDLLPVHLGFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...GCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CAGGCCTGGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAAGGCTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: QAWVEAAMSESSGAPSKGFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...GCCTTTACTCGGGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LWLLTFWAPRPFLAPSPFISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...GAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp AGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RQSFGIPSPCPTFLPALAPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...AGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGGCTGCAGCCGAGACCTaGCCTCATACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKAAAET*PHTLHP
Trigger: TGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGC...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGGTCTGAAGAGCTGATGGCACTGCTGCCTGAGAGCTGCTGCAGCCGAGACCTGGCTGCAGCCGAGACCTaGCCTCATACTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: RSEELMALLPESCCSRDLAAAET*PHTLHP
Trigger: TGGATGCAGAGTATGAGGCCAGGTCTCGGCTGCAGC...CAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAGTGCCATCAGCTCTTCAGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGCCCACAGCTCTCACTaGCGGGTGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIAHSSH*RVLSRP
Trigger: TGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGC...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AACACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACACAGTCGAAACAGGCCTaGGTGGAGGCGGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: NTVRDAGPTRILGAAVETQSKQA*VEAAMS
Trigger: GCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTG...TGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR TCA 90 bp CCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGGCTGCTGGGTCCCTaGAGGCTCAGTGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGTSGQLGYYIWCWHHWLWLLGP*RLSGWR
Trigger: GCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCA...CAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR TCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCG +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGAPANF*RASLDS
Trigger: CGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGC...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCATTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCAGCCGAGGGGTGGGGTaGTTGGAGTCCGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTISRGVG*LESDLD
Trigger: GTCCAGATCGGACTCCAATCACCCCACCCCTCGGCT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAAATAGGCCGGATGCTTaGGATGGTCACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLNRPDA*DGHFWL
Trigger: GAGCCAGAAGTGACCATCTCAAGCATCCGGCCTATT...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTTGAGTGTGTTCTGTaGAGAAATCAGAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GAMLRLCQATALCRRGWLLECVL*RNQSPS
Trigger: AGAAGGACTCTGATTTCTTCACAGAACACACTCAAG...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp GGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTCTTGTTGGTTGGAACTaGGCGAAGCCTCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GRTPQLPDLLPVHLGSSALVGWN*AKPLKK
Trigger: CTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAG...AGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR GCA 90 bp TTGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCCTTGTTGGTTGGAACTaGGCGAAGCCTCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LGPCSGCARPLLSVDGAGLVGWN*AKPLKK
Trigger: CTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAG...GCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASGYQAHAQPFCLLSLLPAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp CCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: PSQGRTPQLPDLLPVHLGWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...GCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp GGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: GRTPQLPDLLPVHLGSSAWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...AGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp TTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAGGCGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: FLFLTINLELLVGQTHGGAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...GCCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR GCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGTCTGTGTTGGGGCCATaGTCCGGCTGTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMSVLGP*SGCARP
Trigger: TGGCCTGGCACAGCCGGAGCATGGCCCCAACACAGA...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp CCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PAASERILHSLGFPAQSPLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...AGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LWLLTFWAPRPFLAPSPFRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...GAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp CTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLVGQTHGGDHGLLRLLLRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...AAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGGATGGCTTTGGCTCCTaGGAATTTCTGACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKDGFGS*EFLTRL
Trigger: GAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATC...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AGCCTGAGTCACAGAGCTCGGATCAGTAGGAACCGTAGCGATCCTGCAAGGAATCTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLSHRARISRNRSDPARNLLPES*CSRDLA
Trigger: GGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAG...ATTCCTTGCAGGATCGCTACGGTTCCTACTGATCCGAGCTCTGTGACTCAGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGCTGCTGCCTGAGAGCTaGTGCAGCCGAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTELLPES*CSRDLA
Trigger: GGCCAGGTCTCGGCTGCAGCAGCTCTCAGGCAGCAG...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGGGGGGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKGGSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCCCCC...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426335.6
CDS-3UTR GCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGCTCTCACTGGCGGGTaGTGTCCAGGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPALTGG*CPGQAQ
Trigger: CTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCCAGTTATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALQLSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATAACTG...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529455.5
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp TGGACGCCCAGGGAGCGGTGCACCCCGGAACAGTCAATGCACAAGAAAACACCGAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: WTPRERCTPEQSMHKKTPKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...CGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWDGAGC*VPEGSV
Trigger: CACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp TGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: WETELRDTKPMPNLSACSGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...AGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: GSFSSTLSIPQAASVSQRSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...CCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: PVHTPGSICIPAGAKAFPSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...GGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATTCCGATCTGGACCAATaGGCAGCCGGCGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHSDLDQ*AAGGTG
Trigger: CCCCGTCCCGCCGGCTGCCCATTGGTCCAGATCGGA...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGATTGGAGTCCGATCTaGACCAATGGGCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRDWSPI*TNGQPA
Trigger: CGCCGGCTGCCCATTGGTCCAGATCGGACTCCAATC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGGGCCAGCCGAGGGGTaGGGTGATTGGAGTCCGATC +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWGPAEG*GDWSPI
Trigger: GATCGGACTCCAATCACCCCACCCCTCGGCTGGCCC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACACAGAATAAGCCATCGTaGGGGAACCCCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTQNKPS*GNPLSQ
Trigger: CTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTG...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGTCCGCTTTCCCTACCTaGGGAAAGTCTGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKSAFPT*GKSGPR
Trigger: TCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGA...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPTRLEA*APALHF
Trigger: GAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGT...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCG +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRAPANF*RASLDS
Trigger: CGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCG +
Preference number: 4 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSAPANF*RASLDS
Trigger: CGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGC...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGGATTTCCCCTCACAGGAGTaGGCGCCTCAAAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: RQHLYPSGSQSFPLRKRDFPSQE*APQRPP
Trigger: GGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAA...ATCCCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGACAAGGGCTGGTACTaGCCATTCCCCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKDKGWY*PFPSQE
Trigger: CTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTC...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGGACAAGGGCTGGTACTaGCCATTCCCCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEDKGWY*PFPSQE
Trigger: CTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTC...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRITADKTLHGHQPGEEGTRRVV*EGIKGS
Trigger: TGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGT...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCAATAGGCCGGATGCTTaGGATGGTCACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PVHTPGSICIPAGAKAFPNRPDA*DGHFWL
Trigger: GAGCCAGAAGTGACCATCTCAAGCATCCGGCCTATT...GGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGTATGGCAGGATAAGTaGGCAGCAGCTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGVWQDK*AAAVGA
Trigger: TGCCCCCACAGCTGCTGCTCACTTATCCTGCCATAC...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGTATGGCAGGATAAGTaGGCAGCAGCTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRVWQDK*AAAVGA
Trigger: TGCCCCCACAGCTGCTGCTCACTTATCCTGCCATAC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCGCTTCTTCTTGCCAATaGTGGAGCTTTTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: SACFLASAACCSRSFSATASSCQ*WSFSVR
Trigger: GCGAACTGAAAAGCTCCATCATTGGCAAGAAGAAGC...GGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532438.5
CDS-3UTR GCA 90 bp CCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: PKISAMPSQGRTPQLPDLPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...AAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp CATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HVVYPKISAMPSQGRTPQAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...CTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCAGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp ATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCCAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: MLSIQRSVPCLARAALPSQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...GCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp CCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGCAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: PRQHLYPSGSQSFPLRKRQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...CCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR GCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTTCTGTGTTGGGGCCATaGTCCGGCTGTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPSVLGP*SGCARP
Trigger: TGGCCTGGCACAGCCGGAGCATGGCCCCAACACAGA...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp GTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VKQVQLRARGFCTHWGFLASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQLRARGFCTHWGFLLNHMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTGATGGCTTTGGCTCCTaGGAATTTCTGACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LYPVHTPGSICIPAGAKADGFGS*EFLTRL
Trigger: GAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATC...AGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGCCTCTCACATCCTCTaGTTCCCTGGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGASHIL*FPGQHQ
Trigger: TTGATGCTGGCCAGGGAAGCAGAGGATGTGAGAGGC...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGCCAGGAGCCTGCCTCTaGCTCTCACATCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEPGACL*LSHPLL
Trigger: AAGCAGAGGATGTGAGAGGCAGAGGCAGGCTCCTGG...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGCCAGGAGCCTGCCTCTaGCTCTCACATCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGPGACL*LSHPLL
Trigger: AAGCAGAGGATGTGAGAGGCAGAGGCAGGCTCCTGG...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCAGTGCTTGGCTCAGCTaGCAGAGGGTGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTISAWLS*QRVRPT
Trigger: TGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGAGTGCTTGGCTCAGCTaGCAGAGGGTGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMSAWLS*QRVRPT
Trigger: TGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: LMLSIQRSVPCLARAALPPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...GGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR CCA 90 bp AGTGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SGRQSFGIPSPCPTFLPAPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...AGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: DRASGYQAHAQPFCLLSLPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...AAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: QLGFLAPQSKQAWVEAAMCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...CATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SRITADKTLHGHQPGEEGKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCACAAGCAGGTCTGTGTTaGGGCCATGCTCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPQAGLC*GHAPAV
Trigger: CACAGCCGGAGCATGGCCCCAACACAGACCTGCTTG...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCAGATGAGATGGCTTTaGCTCCTGCGAATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPQMRWL*LLRISD
Trigger: GTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCCCAGCCTGGGAACTGTaGAGTTCTTGTTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GRQSFGIPSPCPTFLPALPAWEL*SSCCRH
Trigger: GTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGG...GAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTTCCGATCTGGACCAATaGGCAGCCGGCGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFSDLDQ*AAGGTG
Trigger: CCCCGTCCCGCCGGCTGCCCATTGGTCCAGATCGGA...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGAGACAAGACCCTCCATaGCCACCAACCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRRQDPP*PPTRGR
Trigger: TCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCT...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGAGACAAGACCCTCCATaGCCACCAACCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKRQDPP*PPTRGR
Trigger: TCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCT...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGAGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SLGFPAQSPASQTARSGRAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp GGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: GPEAKVPTSSNKSSCEREAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...CTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKTRLEA*APALHF
Trigger: GAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGT...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGGTCCCCAAAGAGGTCTaGAGAGCTGATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEVPKEV*RADGTA
Trigger: AGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGAC...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp GGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGGTCCCCAAAGAGGTCTaGAGAGCTGATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GVQRRKYQHRQTSPAASEVPKEV*RADGTA
Trigger: AGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGAC...CTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAACACTTCCTGCTCCGTaGGCTCCATCCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRTLPAP*APSMSP
Trigger: TGGGGACATGGATGGAGCTCACGGAGCAGGAAGTGT...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGACAAGGGCTGGTACTaGCCATTCCCCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIDKGWY*PFPSQE
Trigger: CTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTC...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGGACAAGGGCTGGTACTaGCCATTCCCCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLDKGWY*PFPSQE
Trigger: CTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTC...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGACACGGAGGGTGGTGTaGGAGGGAATAAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPETRRVV*EGIKGS
Trigger: TGAGCCCTTTATTCCCTCTCACACCACCCTCCGTGT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATAGCCGAGGGGTGGGGTaGTTGGAGTCCGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHSRGVG*LESDLD
Trigger: GTCCAGATCGGACTCCAATCACCCCACCCCTCGGCT...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGGTATGGCAGGATAAGTaGGCAGCAGCTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLVWQDK*AAAVGA
Trigger: TGCCCCCACAGCTGCTGCTCACTTATCCTGCCATAC...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACAAGGGTCTCCGGTCTaGTCCCAAATGAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLQGSPV*SQMKPL
Trigger: TAAAGGTTTCATTTGGGATCAGACCGGAGACCCTTG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp ATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: ILHSLGFPAQSPASQTARTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTGCTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: QTHGGDHGLLRLLLGIGCWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...GCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR GCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCTCACGGAGCTTCTCTaGCACCTGAGCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHLTELL*HLSLPL
Trigger: GAGCGGCAGGCTCAGGTGGCAGAGAAGCTCCGTGAG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTGCATCGGCTGCCTGCTaGTCACGGAGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HRQTSPAASERILHSLGFASAAC*SRSFSA
Trigger: GGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGC...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAASERILHSLGFPAQSPLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...AGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTILLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp CCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAASERILHSLGFPAQSPLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...AGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGATGGACTCCTCCGCCTaGTTCTTGGCATCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKQVQLRARGFCTHWGFLMDSSA*FLASAA
Trigger: GGCAGCCGATGCCAAGAAGCAGGCGGAGGAGTCCAT...CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPCPYPRQHLYPSGSQSFHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...AAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGATGGCTTTGGCTCCTaGGAATTTCTGACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKDGFGS*EFLTRL
Trigger: GAGGCGCGTCAGAAATTCGCAGGAGCCAAAGCCATC...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGCCAGGAGCCTGCCTCTaGCTCTCACATCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLPGACL*LSHPLL
Trigger: AAGCAGAGGATGTGAGAGGCAGAGGCAGGCTCCTGG...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGAGTGCTTGGCTCAGCTaGCAGAGGGTGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWSAWLS*QRVRPT
Trigger: TGTGGGCCTCACCCTCTGGCAGCTGAGCCAAGCACT...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAAGAGTGGTCTGTGTTaGTTGGGAGCCCAACCTACA +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKKSGLC*LGAQPT
Trigger: TGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTT...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGAAGAGTGGTCTGTGTTaGTTGGGAGCCCAACCTACA +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKKSGLC*LGAQPT
Trigger: TGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTCGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: STLSIPQAASVSQREPKLRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...AAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCATGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLACIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: LMLSIQRSVPCLARAALPKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...GGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528708.5
CDS-3UTR CCA 90 bp GGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: GVQRRKYQHRQTSPAASEKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...CTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: GAMLRLCQATALCRRGWLYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp ATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ISAMPSQGRTPQLPDLLPLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...CGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCATTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLAFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp CTCAGTGGCTGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGATTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: LSGWRIPGRGLKRRPDHRFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...TCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCAGCCACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATTCCCTGAAGGCTCAGTaGCTGGCGCATCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHSLKAQ*LAHPRQ
Trigger: CTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGA...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SIPQAASVSQREPKLSPKISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...CTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp AGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SERILHSLGFPAQSPASQPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...CTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGGGTAGGCCAGACGCATaGAGGCGACCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKGRPDA*RRPWTP
Trigger: AGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACC...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGCTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: KLWLLTFWAPRPFLAPSPGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...AGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLAGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGAGGGGTGGGGTGATTaGAGTCCGATCTGGACCAAT +
Preference number: 4 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSEGWGD*SPIWTN
Trigger: ATTGGTCCAGATCGGACTCCAATCACCCCACCCCTC...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGTACCTGGGGAAAGTCTaGACCCAGAATAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKYLGKV*TQNKPS
Trigger: CGATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTA...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCCGCTTTCCCTACCTaGGGAAAGTCTGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPESAFPT*GKSGPR
Trigger: TCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGA...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGAAGAATGACAGTGCTTaGCTCAGCTGCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGKNDSA*LSCQRV
Trigger: CACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTT...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCATGGCACCCAGCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPWHPAH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGCTGGGTGCCA...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCCCCCTAGGCCTTTCTTaGCACCCAGCGCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIPLGLS*HPAHWH
Trigger: ATGCCAATGCGCTGGGTGCCAAGAAAGGCCTAGGGG...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627920.2
CDS-3UTR CCA 90 bp AGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCCCCTAGGCCTTTCTTaGCACCCAGCTGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: SFGIPSPCPTFLPALASSPLGLS*HPADEA
Trigger: AGCTTCATCAGCTGGGTGCCAAGAAAGGCCTAGGGG...GGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGAT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPERKHRT*CWPNSD
Trigger: ATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCATTCTTCTCTGGGGAGTaGTTAGGAACGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPFFSGE*LGTALL
Trigger: GAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAA...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR TCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTTGGCTGCTGGGTCCCTaGAGGCTCAGTGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVWLLGP*RLSGWR
Trigger: GCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCA...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR TCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGGTCCCCAAAGAGGTCTaGAGAGCTGATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMVPKEV*RADGTA
Trigger: AGCAGTGCCATCAGCTCTTCAGACCTCTTTGGGGAC...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCGCTTCTTCTTGCCAATaGTGGAGCTTTTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SACFLASAACCSRSFSATASSCQ*WSFSVL
Trigger: CAAAACTGAAAAGCTCCATCATTGGCAAGAAGAAGC...GGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR GCA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACTTGTTGGTTGGAACTaGGCGAAGCCTCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLLVGWN*AKPLKK
Trigger: CTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCCTTGTTGGTTGGAACTaGGCGAAGCCTCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LWLLTFWAPRPFLAPSPFLVGWN*AKPLKK
Trigger: CTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAG...GAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp AGGAACGGCACTACTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: RNGTTHVVYPKISAMPSQTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...CTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR GCA 90 bp CTTTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LFLFLTINLELLVGQTHGTPRER*TPEQSM
Trigger: CATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGT...TCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCAGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: VHLGSSAIIFGVGIIGCAAALPS*RIFSRY
Trigger: GTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGC...TGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR GCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FALTGVSCSITCISDSTELLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPESCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp GACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: DRASGYQAHAQPFCLLSLSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...AAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: WETELRDTKPMPNLSACSRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...AGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGACAGACTTGACACCCTaGTTAAACTGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKTDLTP*LNWAMS
Trigger: GGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGT...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCACAGACTTGACACCCTaGTTAAACTGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PCPYPRQHLYPSGSQSFPTDLTP*LNWAMS
Trigger: GGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGT...GGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGACAGGCCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKTGLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGT...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTACAGGCCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQSFGIPSPCPTFLPALATGLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGT...AGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLKLWLLTFWAPRPFLAPCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...GGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp CACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSPAAGSSPGTSGQLGYYWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...ATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCTTAGCTTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLTFWAPRPFLAPSPFLAWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...AGCTAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GGCTGCTGGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAGGCAGGGGGATCATATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: GCWVPEGSVAGASQAGGSYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...TGATCCCCCTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529439.5
CDS-3UTR CCA 90 bp CTGGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCAGAGTCCTTCTTCTCTaGGGAGTGATTAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LAPSPLPCPYPRQHLYPSRVLLL*GVIRNG
Trigger: GCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCT...GCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp AGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCCTCCGCCTGCTTCTTaGCATCGGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRKYQHRQTSPAASERILPPPAS*HRLPAA
Trigger: AGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGG...CAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: REDFALTGVSCSITCISDAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp ATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGGCATGGAGGCGACCATaGACTCCTCCGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILHSLGFPAQSPASQTARAWRRP*TPPPAS
Trigger: AGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGC...CCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTISDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCATCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPSDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGCTCTCACTGGCGGGTGCTGTCCAGGCCAAGCCCAGAATGATGCAGAGGAAGATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: QLSLAGAVQAKPRMMQRKIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...CTTCCTCTGCATCATTCTGGGCTTGGCCTGGACAGCACCCGCCAGTGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGACACCCTGCTTAAACTaGGCAATGTCCGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGTPCLN*AMSAVG
Trigger: GCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGT...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGACACCCTGCTTAAACTaGGCAATGTCCGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPETPCLN*AMSAVG
Trigger: GCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AGCGATCCTGCAAGGAATTCATCACACCATTGGCCAGCACAGCCATTTTCCCAGGATTGGAGTCCGATCTaGACCAATGGGCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SDPARNSSHHWPAQPFSQDWSPI*TNGQPA
Trigger: CGCCGGCTGCCCATTGGTCCAGATCGGACTCCAATC...CTGGGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTCCTTGCAGGATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGAGTGAGCAGCAGCTGTaGGGGCAGGACAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWSEQQL*GQDRRT
Trigger: TGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACT...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGTCCGCTTTCCCTACCTaGGGAAAGTCTGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMSAFPT*GKSGPR
Trigger: TCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGA...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGCAGCCTCTTTCCCCATaGGACGGGTCTACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLQPLSP*DGSTVN
Trigger: GTTCACTGTAGACCCGTCCCATGGGGAAAGAGGCTG...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCACCCAGAAGAGGCCACTaGCAGCAGCAGCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPPRRGH*QQQQQQ
Trigger: TTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGAGACAAGACCCTCCATaGCCACCAACCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTERQDPP*PPTRGR
Trigger: TCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCT...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAGCCCACAGCTCTCACTaGCGGGTGCTGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRAHSSH*RVLSRP
Trigger: TGGCCTGGACAGCACCCGCCAGTGAGAGCTGTGGGC...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAGTGGTCTGTGTTGCTTaGGAGCCCAACCTACAACCC +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRVVCVA*EPNLQP
Trigger: GGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCAC...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAGTGGTCTGTGTTGCTTaGGAGCCCAACCTACAACCC +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPVVCVA*EPNLQP
Trigger: GGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCAC...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTCGCTTCTTCCCTTTTCAGTTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SFGIPSPCPTFLPALASSLFSSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGAACTGAAAAG...GGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532438.5
CDS-3UTR TCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGAT +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMRKHRT*CWPNSD
Trigger: ATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp AGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGGCCGCTCAATCTCACTaGAGCTCTGGCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SERILHSLGFPAQSPASQAAQSH*SSGCSP
Trigger: AGGTGAGCAGCCAGAGCTTCAGTGAGATTGAGCGGC...CTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp TTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAGGACACTTCCTGCTCCGTaGGCTCCATCCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FPLSYDQSGAPGRPDAWRTLPAP*APSMSP
Trigger: TGGGGACATGGATGGAGCTCACGGAGCAGGAAGTGT...CCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAGGGACGGGTCTACAGTaGACTCCTTCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRGTGLQ*TPSRPP
Trigger: GGGAGGCCTGGAAGGAGTTCACTGTAGACCCGTCCC...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGGACCCTGAGACACCCTaGAACAATCTTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEDPETP*NNLPSA
Trigger: AGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTC...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACGTAGACGGGGCTGGCTaGTGGGTCCCTGAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYVDGAG*WVPEGS
Trigger: TGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTAC...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGCCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTTTGGCATCGGCTGCCTaGTGCTCACGGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HRQTSPAASERILHSLGFLASAA*CSRSFS
Trigger: AGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAA...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp ATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGCTTCTTGGCATCGGCTaGCTGCTGCTCACGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ILHSLGFPAQSPASQTARLLGIG*LLLTEL
Trigger: AAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAG...CCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QHRQTSPAASERILHSLGHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...CCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: VQRRKYQHRQTSPAASERSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp ACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTCCTGGCCTCATACTCTaGATCCACCTCCCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSSNKSSCEREDFALTGVPGLIL*IHLPPK
Trigger: TTTGGGCGGGAGGTGGATGCAGAGTATGAGGCCAGG...AACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp TCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: STLSIPQAASVSQREPKLLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...AAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGTCACAGAGGGTCCTaGATTCCACAGCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRCHRGS*IPQQMV
Trigger: TACCATCTGCTGTGGAATGCAGGACCCTCTGTGACA...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAACAGGCCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRTGLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGT...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CCA 90 bp CACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HSPAAGSSPGTSGQLGYYCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...ATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCTTAGCTTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: LLTFWAPRPFLAPSPFLAFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...AGCTAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGAGAGTCCTTCTTCTCTaGGGAGTGATTAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPERVLLL*GVIRNG
Trigger: GCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGTTCCAGTGAGGCTTTaGGTGAGGTGCCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPVPVRL*VRCQAG
Trigger: ACCTGCTTGGCACCTCACCCAAAGCCTCACTGGAAC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGGTTCCAGTGAGGCTTTaGGTGAGGTGCCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKVPVRL*VRCQAG
Trigger: ACCTGCTTGGCACCTCACCCAAAGCCTCACTGGAAC...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp TTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAGGCATCTCACTGAAGCTCTaGCTGCTCACCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FLFLTINLELLVGQTHGGISLKL*LLTFWA
Trigger: GGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGAGAT...GCCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTCAGACAGCACGGAGTaGGAGACAGAGCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: FALTGVSCSITCISDSTESDSTE*ETELRD
Trigger: ATCCCGAAGCTCTGTCTCCCACTCCGTGCTGTCTGA...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCTTAGCTATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLTFWAPRPFLAPSPFLAIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...AGCTAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGCAGATGAGATGGCTTTaGCTCCTGCGAATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGQMRWL*LLRISD
Trigger: GTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTG...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGACATGTCAGATGAGATaGCTTTGGCTCCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKTCQMR*LWLLRI
Trigger: AATTCGCAGGAGCCAAAGCCATCTCATCTGACATGT...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACAACACCCTGCTTAAACTaGGCAATGTCCGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: TGVSCSITCISDSTEWETTPCLN*AMSAVG
Trigger: GCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGT...TGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCACACCCTGCTTAAACTaGGCAATGTCCGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTITPCLN*AMSAVG
Trigger: GCCTACAGCGGACATTGCCCAGTTTAAGCAGGGTGT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RGRVVCVAWEPNLQPKGGKASPA*ELWSSC
Trigger: ACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT...CCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEKASPA*ELWSSC
Trigger: ACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGAGGGGTGGGGTGATTaGAGTCCGATCTGGACCAAT +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEEGWGD*SPIWTN
Trigger: ATTGGTCCAGATCGGACTCCAATCACCCCACCCCTC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCAGAATAAGCCATCGTaGGGGAACCCCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKQNKPS*GNPLSQ
Trigger: CTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTG...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCAAGAATGACAGTGCTTaGCTCAGCTGCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIKNDSA*LSCQRV
Trigger: CACCCTCTGGCAGCTGAGCCAAGCACTGTCATTCTT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCAAGTTATTATCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: LSIQRSVPCLARAALPSCKLLSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGATAATAACTT...GCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CCA 90 bp TTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCTCTGTGGACCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: FGGPEAKVPTSSNKSSCELCGPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGTCCACAGAG...CTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCTGGAATCCAACTCTGTaGACCTTGTTGGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: SLKLWLLTFWAPRPFLAPWNPTL*TLLVGT
Trigger: AGTTCCAACCAACAAGGTCCACAGAGTTGGATTCCA...GGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532478.5
3UTR CAA 72 bp CCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTaGACACCCTGCTTAAACTGGGCAATGTCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLASTAIFPATD*TPCLNWAMSAV
Trigger: TACAGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGTTGAGTGTGTTCTGTaGAGAAATCAGAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTVECVL*RNQSPS
Trigger: AGAAGGACTCTGATTTCTTCACAGAACACACTCAAC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR TCA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAGCTTCTTCTTGCCAATaGTGGAGCTTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPASSCQ*WSFSVP
Trigger: TGGAACTGAAAAGCTCCATCATTGGCAAGAAGAAGC...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR TCA 90 bp GGATTGTCCTTGTACTTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAGCTTCTCTGCCACCTaGGCCTGCCGCTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GLSLYFGGPEAKVPTSSNSFSAT*ACRSIS
Trigger: TGAGATTGAGCGGCAGGCTCAGGTGGCAGAGAAGCT...GTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGAATAGGCCGGATGCTTaGGATGGTCACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTENRPDA*DGHFWL
Trigger: GAGCCAGAAGTGACCATCTCAAGCATCCGGCCTATT...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATAATAGGCCGGATGCTTaGGATGGTCACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRARGFCTHWGFLLNHLHNRPDA*DGHFWL
Trigger: GAGCCAGAAGTGACCATCTCAAGCATCCGGCCTATT...ATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGCAAGGGTCTCCGGTCTaGTCCCAAATGAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKQGSPV*SQMKPL
Trigger: TAAAGGTTTCATTTGGGATCAGACCGGAGACCCTTG...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGGTACAGAGGGACCCTaGGACACCCTGAAACAATCT +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPGTEGP*DTLKQS
Trigger: AGATTGTTTCAGGGTGTCTCAGGGTCCCTCTGTACC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RYIWAARLLYLVLASLAVAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...CACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCATTCCCGCCGACCTaGATACACCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFAFPPT*IHLSWN
Trigger: GTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGC...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp TGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCCAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CEREDFALTGVSCSITCIQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...GATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCATGCCCAACCTTTCTaGCTGCTCTCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHHAQPF*LLSLLP
Trigger: GGGAAGAAGCGAGAGCAGGCAGAAAGGTTGGGCATG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: LRARGFCTHWGFLLNHLHSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...ATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGCTGTGGAGTTCTTGTTaGCGTCACCATCGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLLWSSC*RHHRKP
Trigger: AGGCTTACGATGGTGACGGCAACAAGAACTCCACAG...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCACGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp ACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTCGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: TSSNKSSCEREDFALTGVRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...AACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: GSSPGTSGQLGYYIWCWHPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...ATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATCCATGCCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: LGSSAIIFGVGIIGCASMPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...CATGGATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp AGTGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SGRQSFGIPSPCPTFLPACIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...AGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp CCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: PAASERILHSLGFPAQSPWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...AGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTACTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALPSCRIFSRYIWAARLLLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...TAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp TCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: SIPQAASVSQREPKLSPKIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...CTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGCAGATGAGATGGCTTTaGCTCCTGCGAATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKQMRWL*LLRISD
Trigger: GTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTG...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLKASPA*ELWSSC
Trigger: ACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCAGAATAAGCCATCGTaGGGGAACCCCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHQNKPS*GNPLSQ
Trigger: CTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACCCTGGTTCCAGAGGATaGGGACCCAAGGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYPGSRG*GPKASN
Trigger: GTTCGAGGCCTTGGGTCCCCATCCTCTGGAACCAGG...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCAGCCTCTTTCCCCATaGGACGGGTCTACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHQPLSP*DGSTVN
Trigger: GTTCACTGTAGACCCGTCCCATGGGGAAAGAGGCTG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEAFHSR*YRGTLR
Trigger: TCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGC...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTGTGGACCTTGTTGGTTaGAACTGCGCGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QTSPAASERILHSLGFPAVDLVG*NCAKPL
Trigger: AAGAGGCTTCGCGCAGTTCCAACCAACAAGGTCCAC...AGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
3UTR CAA 72 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCTGCTCAATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HRQTSPAASERI*HSLGFPAQSPA
Trigger: TGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR TCA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGAT +
Preference number: 4 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCRKHRT*CWPNSD
Trigger: ATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCT...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR TCA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCAGCTCCTGCGAATTTCTaGCGCGCCTCACTAGACTCG +
Preference number: 4 (lower is better)
Translates to: KYQHRQTSPAASERILHSAPANF*RASLDS
Trigger: CGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGC...TGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR TCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACACACTTCCTGCTCCGTaGGCTCCATCCATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYTLPAP*APSMSP
Trigger: TGGGGACATGGATGGAGCTCACGGAGCAGGAAGTGT...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGAGCGCGTGCTACGGGTaGTTCTCAAGAAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: PGTSGQLGYYIWCWHHWLSACYG*FSRRKR
Trigger: ACGTTTCCTTCTTGAGAATCACCCGTAGCACGCGCT...CAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR TCA 90 bp ATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCGGAGACATCTCCTTATaGCAGCGAAGTTATTATCGC +
Preference number: 4 (lower is better)
Translates to: MLSIQRSVPCLARAALPSGDISL*QRSYYR
Trigger: GCGATAATAACTTCGCTGTCATAAGGAGATGTCTCC...GCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR GCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGCTTGTTGGTTGGAACTaGGCGAAGCCTCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPELVGWN*AKPLKK
Trigger: CTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAG...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp AAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGATAAAGAATGTCACAGAGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: KTLHGHQPGEEGIKNVTEPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CTCTGTGACATTCTTTATCCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: FALTGVSCSITCISDSTEPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR GCA 90 bp CAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: QHRQTSPAASERILHSLGPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp CGGTGCACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTGATGCTGGCCTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: RCTPEQSMHKKTPYVMLAWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...GGCCAGCATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCACCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR GCA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HRQTSPAASERILHSLGFQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp GGAATTCATCACACCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACTCCTGCTCAATCACCTaGATCTCAGACAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: GIHHTIGQHSHFPSHRLDSCSIT*ISDSTE
Trigger: CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA...GTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGACCTGGCCTCATACTCTaGATCCACCTCCCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRPGLIL*IHLPPK
Trigger: TTTGGGCGGGAGGTGGATGCAGAGTATGAGGCCAGG...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACAGACTTGACACCCTaGTTAAACTGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPTDLTP*LNWAMS
Trigger: GGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGT...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGAAGAGTGGTCTGTGTTaGTTGGGAGCCCAACCTACA +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWKSGLC*LGAQPT
Trigger: TGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTT...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPGTSGQLGYYIWCWHHWRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...CCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTCGAAACAGGCCTTGTTaGTTGGAACTGCGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFRNRPC*LELREA
Trigger: GGCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCG...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGACCCAACTCGGATTCTTaGCGCCGCAGTCGAAACAGG +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRPNSDS*RRSRNR
Trigger: CCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGG...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTICIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp CCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: PDLLPVHLGSSAIIFGVGWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...GCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp CGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: RTPQLPDLLPVHLGSSAIYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...AATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGATTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: SLGFPAQSPASQTARSGRFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGACATGTCAGATGAGATaGCTTTGGCTCCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPETCQMR*LWLLRI
Trigger: AATTCGCAGGAGCCAAAGCCATCTCATCTGACATGT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGAATTCATCACACCATTaGCCAGCACAGCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKNSSHH*PAQPFS
Trigger: GGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATT...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTTACCTGGGGAAAGTCTaGACCCAGAATAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: WPASSSQHPESNHSRQDPYLGKV*TQNKPS
Trigger: CGATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTA...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCAGCATTCCACAGCAGATaGTACAGAGGGACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPAFHSR*YRGTLR
Trigger: TCTCAGGGTCCCTCTGTACCATCTGCTGTGGAATGC...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGAGAAAACACCGTACGTaGTGCTGGCCCAACTCGGAT +
Preference number: 4 (lower is better)
Translates to: SPGTSGQLGYYIWCWHHWRKHRT*CWPNSD
Trigger: ATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCT...CCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR TCA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWKEHVR*DGFGSC
Trigger: GCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTT...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATGACCCTGAGACACCCTaGAACAATCTTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHDPETP*NNLPSA
Trigger: AGCACTTGGAAGATTGTTTCAGGGTGTCTCAGGGTC...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTCAAAGATCAGTGCCATaGCTAGCCAGGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVQRSVP*LARAAL
Trigger: GAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTG...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528041.5
ENST00000528708.5
CDS-3UTR GCA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGCCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FALTGVSCSITCISDSTEPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTCAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR GCA 90 bp AGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCGAGCGAGAGGATTTTaGACTCACTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RRKYQHRQTSPAASERILRARGF*THWGFL
Trigger: CAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCG...CAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR GCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGACAGACTTGACACCCTaGTTAAACTGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKTDLTP*LNWAMS
Trigger: GGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGT...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR GCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAGCCTCTCACATCCTCTaGTTCCCTGGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRASHIL*FPGQHQ
Trigger: TTGATGCTGGCCAGGGAAGCAGAGGATGTGAGAGGC...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPAWELWSSCCRHHRKPELGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GAAAACACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAACTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ENTVRDAGPTRILGAAVELGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...TTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCACATGTCAGATGAGATaGCTTTGGCTCCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTITCQMR*LWLLRI
Trigger: AATTCGCAGGAGCCAAAGCCATCTCATCTGACATGT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CCA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGAATTCATCACACCATTaGCCAGCACAGCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMNSSHH*PAQPFS
Trigger: GGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAAATTCATCACACCATTaGCCAGCACAGCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRNSSHH*PAQPFS
Trigger: GGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATT...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAAAGCATCCCCAGCCTaGGAACTGTGGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: REDFALTGVSCSITCISDKASPA*ELWSSC
Trigger: ACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACGTGGTCTGTGTTGCTTaGGAGCCCAACCTACAACCC +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYVVCVA*EPNLQP
Trigger: GGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCAC...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAAATAGGCCGGATGCTTaGGATGGTCACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRNRPDA*DGHFWL
Trigger: GAGCCAGAAGTGACCATCTCAAGCATCCGGCCTATT...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGAGCTTCTTCTTGCCAATaGTGGAGCTTTTCAGTTATC +
Preference number: 4 (lower is better)
Translates to: SLGFPAQSPASQTARSGRASSCQ*WSFSVI
Trigger: GATAACTGAAAAGCTCCATCATTGGCAAGAAGAAGC...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529455.5
CDS-3UTR GCA 90 bp TCTCCCGGTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: SPGTSGQLGYYIWCWHHWPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...CCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTACCGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR GCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGACAGCCCTTTCTTAGCTaGTGCTGGCTTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRQPFLS*CWLLLA
Trigger: GGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTG...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCATGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp TCTGTAGCTTCTTTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAAAAAAGCCGTCGCATTaGCATTCCCGCCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SVASFPLSYDQSGAPGRPKKPSH*HSRRPA
Trigger: TGCAGGTCGGCGGGAATGCCAATGCGACGGCTTTTT...TGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAAAGAAGCTACAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTILGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACACTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGVSCSITCISDSTEWETLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...TGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGAGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: ARGFCTHWGFLLNHLHLRGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...TCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp AGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGGGCAATGGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: STAIFPATDLTPCLNWAMGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...CATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp CTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCACAGAGCTCGGATACATGTCAGATGAGATaGCTTTGGCTCCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: LWSSCCRHHRKPESQSSDTCQMR*LWLLRI
Trigger: AATTCGCAGGAGCCAAAGCCATCTCATCTGACATGT...ATCCGAGCTCTGTGACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CCA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGAATTCATCACACCATTaGCCAGCACAGCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: KASPAWELWSSCCRHHRKNSSHH*PAQPFS
Trigger: GGAAAATGGCTGTGCTGGCCAATGGTGTGATGAATT...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR TCA 90 bp ACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATCTTCTTCTCTGGGGAGTaGTTAGGAACGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: TSGQLGYYIWCWHHWLCIFFSGE*LGTALL
Trigger: GAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAA...GATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528708.5
CDS-3UTR TCA 90 bp GAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EAKVPTSSNKSSCEREDFKEHVR*DGFGSC
Trigger: GCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTT...AAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR GCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACCCCCGGAACAGTCAATaGACAAGAAAACACCGTACG +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYPRNSQ*TRKHRT
Trigger: CGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGG...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR GCA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp ACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTGGCATCATTGGCTGTaGATCCATGTTGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: TSSNKSSCEREDFALTGVWHHWL*IHVGEK
Trigger: TTTTTCGCCAACATGGATGCACAGCCAATGATGCCA...AACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR GCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGATGTCACAGAGGGTCCTaGATTCCACAGCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRCHRGS*IPQQMV
Trigger: TACCATCTGCTGTGGAATGCAGGACCCTCTGTGACA...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACTGGTGTTGGCATCATTaGCTGTGCATCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYWCWHH*LCIHVG
Trigger: GCCAACATGGATGCACAGCCAATGATGCCAACACCA...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GTCCTTGTACTTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCGGATTTTGCACTCACTaGGGTTTCCTGCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: VLVLWGSRGESTNIVKQVGFCTH*GFLLNH
Trigger: GTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCC...GACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAAGTACAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CCA 90 bp GGATTGTCCTTGTACTTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACCAGATGAGATGGCTTTaGCTCCTGCGAATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GLSLYFGGPEAKVPTSSNQMRWL*LLRISD
Trigger: GTCAGAAATTCGCAGGAGCCAAAGCCATCTCATCTG...GTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533243.5
3UTR CAA 72 bp GACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTaGACACCACTTTGTTTCAATACAAACAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DQQGARPCRGFI*TPLCFNTNSPE
Trigger: TTCTGGACTGTTTGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp TCTGTAGCTTCTTTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCATTCTTCTCTGGGGAGTaGTTAGGAACGGCACTACTC +
Preference number: 4 (lower is better)
Translates to: SVASFPLSYDQSGAPGRPFFSGE*LGTALL
Trigger: GAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAA...TGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAAAGAAGCTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR TCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRKEHVR*DGFGSC
Trigger: GCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTT...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAAAGAACATGTCAGATaGGATGGCTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYKEHVR*DGFGSC
Trigger: GCAGGAGCCAAAGCCATCTCATCTGACATGTTCTTT...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp CTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATTTTGAGTGTGTTCTGTaGAGAAATCAGAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRARGFCTHWGFLLNHLHFECVL*RNQSPS
Trigger: AGAAGGACTCTGATTTCTTCACAGAACACACTCAAA...ATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCATGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KYQHRQTSPAASERILHSCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...TGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATCCATGTTGTTCTCCCGGTACATCTaGGCAGCTCGGCTATTATAT +
Preference number: 4 (lower is better)
Translates to: GSSAIIFGVGIIGCASMLFSRYI*AARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAA...CAACATGGATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTAGAGTCCTTCTTCTCTaGGGAGTGATTAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVRVLLL*GVIRNG
Trigger: GCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCT...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528041.5
ENST00000528708.5
CDS-3UTR CCA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAATTGTCCTTGTACTTTaGGGGTCCAGAGGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRIVLVL*GSRGES
Trigger: ACTTTCGCCTCTGGACCCCCAAAGTACAAGGACAAT...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR TCA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACGCTTCTTCTTGCCAATaGTGGAGCTTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYASSCQ*WSFSVP
Trigger: TGGAACTGAAAAGCTCCATCATTGGCAAGAAGAAGC...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR TCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTTCGGTGAGCCACTCTTaGGTGTGTTCTGTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVSVSHS*VCSVKK
Trigger: TTTCTTCACAGAACACACTCAAGAGTGGCTCACCGA...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR GCA 90 bp TCTGTAGCTTCTTTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCACCCTTTCTTAGCTGCTaGTGGCTTCTTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SVASFPLSYDQSGAPGRPPFLSC*WLLLAN
Trigger: ATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGG...TGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAAAGAAGCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTTGCATACACCTCAGCTaGAACCAGTTCCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVCIHLS*NQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCA...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528708.5
CDS-3UTR CCA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: FALTGVSCSITCISDSTEYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp AGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCTCGGCTATTATATTTaGTGTTGGCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRKYQHRQTSPAASERILLGYYI*CWHHWL
Trigger: CAGCCAATGATGCCAACACCAAATATAATAGCCGAG...CAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CCA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CCA 90 bp GTCCTTGTACTTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: VLVLWGSRGESTNIVKQVYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...GACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAAGTACAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CCA 90 bp GAAATCAGAGTCCTTCTTCTCTGGGGAGTGATTAGGAACGGCACTACTCATGTTTATTATATTTGGTGTTaGCATCATTGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: EIRVLLLWGVIRNGTTHVYYIWC*HHWLCI
Trigger: GATGCACAGCCAATGATGCCAACACCAAATATAATA...AACATGAGTAGTGCCGTTCCTAATCACTCCCCAGAGAAGAAGGACTCTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528041.5
ENST00000528708.5
CDS TCA 90 bp TCGGCTCCGCCGCCATTTTCTCTCCTTCCCAGACACAACCGCGGCTaGCGGGTCCCGCCGCGGGCCAATCCACGGCGGGGAGGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: SAPPPFSLLPRHNRG*RVPPRANPRRGGRA
Trigger: AGCCCGCCCTCCCCGCCGTGGATTGGCCCGCGGCGGGACCCGTCAGCCGCGGTTGTGTCTGGGAAGGAGAGAAAATGGCGGCGGAGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS CCA 90 bp GGGCTCACCAGGCCGGCCTCAGCGGTGCCTGGGCCAGCCGAGGGGTaGGGTGATTGGAGTCCGATCTGGACCAATGGGCAGCCGGCGGGA +
Preference number: 5 (lower is better)
Translates to: GLTRPASAVPGPAEG*GDWSPIWTNGQPAG
Trigger: TCCCGCCGGCTGCCCATTGGTCCAGATCGGACTCCAATCACCCCACCCCTCGGCTGGCCCAGGCACCGCTGAGGCCGGCCTGGTGAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS CCA 90 bp TCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAGGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: SGCARPLLSVDGAGC*VPEGSVAGASQAGG
Trigger: ACCCCCTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395449.7
ENST00000524782.6
ENST00000525314.5
ENST00000527097.5
CDS CCA 90 bp TCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTaGGTCCCTGAAGGCTCAGTGGCTGGCGCATCCCAGGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SGCARPLLSVDGAGC*VPEGSVAGASQAGG
Trigger: TCCCCCTGCCTGGGATGCGCCAGCCACTGAGCCTTCAGGGACCCAGCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426335.6
CDS CCA 90 bp GGCCCAAGTCGAGGCAGCCACTCTCCCTTGTTGCCCAGACACCCCTaGCCGGCCGGGTGGAAACACGGCAACCGCGCGGAGAGCCTACCT +
Preference number: 5 (lower is better)
Translates to: GPSRGSHSPLLPRHP*PAGWKHGNRAESLP
Trigger: AGGTAGGCTCTCCGCGCGGTTGCCGTGTTTCCACCCGGCCGGCCAGGGGTGTCTGGGCAACAAGGGAGAGTGGCTGCCTCGACTTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CCA 90 bp CAGAGGCGGAGACGGACCGCCCATGTGCCAAAGGGCCCACACAGGTaGTTCCCTCTGGCAGGAGGCTACCGGACCCTCTCGGCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: QRRRRTAHVPKGPHR*FPLAGGYRTLSAQR
Trigger: CCTCTGGGCCGAGAGGGTCCGGTAGCCTCCTGCCAGAGGGAACCACCTGTGTGGGCCCTTTGGCACATGGGCGGTCCGTCTCCGCCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS GCA 90 bp ACCGAATTCAGAGCGGCCCAAGTCGAGGCAGCCACTCTCCCTTGTTaGCCAGACACCCCTGGCCGGCCGGGTGGAAACACGGCAACCGCG +
Preference number: 5 (lower is better)
Translates to: TEFRAAQVEAATLPC*PDTPGRPGGNTATA
Trigger: CGCGGTTGCCGTGTTTCCACCCGGCCGGCCAGGGGTGTCTGGGCAACAAGGGAGAGTGGCTGCCTCGACTTGGGCCGCTCTGAATTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CCA 90 bp AGGAGCCCAACCAGCATGGCCAAGACAATAGTGCTCCGCTGGAGCTaGGCATGGGCGGCTCACACAGCCCCAGCAGAGCCCGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RSPTSMAKTIVLRWS*AWAAHTAPAEPGPE
Trigger: CTCAGGCCCGGGCTCTGCTGGGGCTGTGTGAGCCGCCCATGCCCAGCTCCAGCGGAGCACTATTGTCTTGGCCATGCTGGTTGGGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS-3UTR CAA 90 bp GGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: GPCSGCARPLLSVDGAGCAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...GCAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS GCA 90 bp ACGCCTGCCCGCTGGCATACTGACCCAGTGAGGCTTTGGGTGAGGTaGCAAGCAGGTCTGTGTTGGGGCCATGCTCCGGCTGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TPARWHTDPVRLWVR*QAGLCWGHAPAVPG
Trigger: GCCTGGCACAGCCGGAGCATGGCCCCAACACAGACCTGCTTGGCACCTCACCCAAAGCCTCACTGGGTCAGTATGCCAGCGGGCAGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS-3UTR CAA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: GAMLRLCQATALCRRGWLVWISV*FGSAAI
Trigger: AATGGCGGCGGAGCCGAACAAGACCGAAATCCAGAC...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: GAMLRLCQATALCRRGWLQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTATCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGCCCCTAGGCCTTTCTaGGCACCCAGCGCATTGGCA +
Preference number: 5 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPAPRPF*APSALA
Trigger: TGCCAATGCGCTGGGTGCCAAGAAAGGCCTAGGGGC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627920.2
CDS CCA 90 bp AAAAACAGGAGCCCAACCAGCATGGCCAAGACAATAGTGCTCCGCTaGAGCTGGGCATGGGCGGCTCACACAGCCCCAGCAGAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: KNRSPTSMAKTIVLR*SWAWAAHTAPAEPG
Trigger: CCCGGGCTCTGCTGGGGCTGTGTGAGCCGCCCATGCCCAGCTCCAGCGGAGCACTATTGTCTTGGCCATGCTGGTTGGGCTCCTGTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS-3UTR CAA 90 bp CAGCCCTTGGTAACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QPLVTPRQRSFPSPGTQKSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...CTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGTTACCAAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLAAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: PKISAMPSQGRTPQLPDLAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...AAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR CAA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: GAMLRLCQATALCRRGWLLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp GGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCTCTGTAGACGGGGCTGGCTGCTCGGTGAGCCACTCTaGAGTGTGTTCTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GAMLRLCQATALCRRGWLLGEPL*SVFCEE
Trigger: TTCTTCACAGAACACACTCAAGAGTGGCTCACCGAG...CAGCCAGCCCCGTCTACAGAGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS TCA 90 bp TTTGGCTCCTGCGAATTTCTGACGCGCCTCACTAGACTCGAGGCCTaGGCTCCGGCTCTCCACTTCCCTCCGGTTTGTGGCTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: FGSCEFLTRLTRLEA*APALHFPPVCGSQA
Trigger: TGCCTGGGAGCCACAAACCGGAGGGAAGTGGAGAGCCGGAGCTCAGGCCTCGAGTCTAGTGAGGCGCGTCAGAAATTCGCAGGAGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395449.7
CDS GCA 90 bp AAAAAGAGGAAGTTTTGGCCCAGAGGCGGAGACGGACCGCCCATGTaGCAAAGGGCCCACACAGGTGGTTCCCTCTGGCAGGAGGCTACC +
Preference number: 5 (lower is better)
Translates to: KKRKFWPRGGDGPPM*QRAHTGGSLWQEAT
Trigger: GGTAGCCTCCTGCCAGAGGGAACCACCTGTGTGGGCCCTTTGGCACATGGGCGGTCCGTCTCCGCCTCTGGGCCAAAACTTCCTCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS GCA 90 bp TGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGATaGCTCGGTGAGCCACTCCTGCTGGCAAGAAGCACCAAGACCTAC +
Preference number: 5 (lower is better)
Translates to: WRIPGRGLKRRPDHR*LGEPLLLARSTKTY
Trigger: GTAGGTCTTGGTGCTTCTTGCCAGCAGGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528444.5
CDS-3UTR CAA 90 bp GCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGGCATCGGCTTCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: ARRMEATMDSSACFLASASKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...AGCCGATGCCAAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCTCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPSKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TCCGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: SACFLASAACCSRSFSATQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...GGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTTGGCACCCAGCGCATaGGCATTCCCGCCGACCTGC +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRLAPSA*AFPPTC
Trigger: GCAGGTCGGCGGGAATGCCAATGCGCTGGGTGCCAA...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627920.2
CDS-3UTR CAA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLASKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CTCAGTGGCTGGCGCATCCCAGGCAGGGGGCTGAAAAGGAGGCCAGATCACAGATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: LSGWRIPGRGLKRRPDHRSKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TCTGTGATCTGGCCTCCTTTTCAGCCCCCTGCCTGGGATGCGCCAGCCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGCCAAGCAGGTCTGTGTaGGGGCCATGCTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: SPAWELWSSCCRHHRKPEPSRSV*GPCSGC
Trigger: ACAGCCGGAGCATGGCCCCAACACAGACCTGCTTGG...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp CTGGAGCTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LELLVGQTHGGDHGLLRLAAGFF*PMMELF
Trigger: GAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGC...CAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CAA 90 bp CCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: PVHTPGSICIPAGAKAFPAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...GGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CAA 90 bp ACGCCCAGACAAAGGTCCTTCCCCTCTCCTGGCACCCAGAAGAGGCCACTGGCAGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TPRQRSFPSPGTQKRPLAASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...TGCCAGTGGCCTCTTCTGGGTGCCAGGAGAGGGGAAGGACCTTTGTCTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCGATTGTCCTTGTACTTaGGGGGTCCAGAGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPDCPCT*GVQRRK
Trigger: CTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATC...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTAGAAGAGTGGTCTGTGTaGCTTGGGAGCCCAACCTAC +
Preference number: 5 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLEEWSV*LGSPTY
Trigger: GTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTC...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: SRITADKTLHGHQPGEEGVWISV*FGSAAI
Trigger: AATGGCGGCGGAGCCGAACAAGACCGAAATCCAGAC...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: YPKISAMPSQGRTPQLPDNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...ATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp GCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: ALPSCRIFSRYIWAARLLSKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp CTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: LMLSIQRSVPCLARAALPAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...GGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR CAA 90 bp TGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: WETELRDTKPMPNLSACSAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...AGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CCTAGCCAGGGCCGCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: PSQGRTPQLPDLLPVHLGARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...GCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CAA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCCCAAGCAGGTCTGTGTaGGGGCCATGCTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIPSRSV*GPCSGC
Trigger: ACAGCCGGAGCATGGCCCCAACACAGACCTGCTTGG...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp TCCGCCTGCTTCTTGGCATCGGCTGCCTGCTGCTCACGGAGCTTCTCTGCCACCGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SACFLASAACCSRSFSATAAGFF*PMMELF
Trigger: GAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGC...GGTGGCAGAGAAGCTCCGTGAGCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CAA 90 bp GCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGGATTGTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AASVSQREPKLSPKEKGLSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...CAATCCCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTATTCCCAGCCACAGACTaGACACCCTGCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLFPATD*TPCLNW
Trigger: CCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAA...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS GCA 90 bp CGGAGAGCCTACCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTGATG +
Preference number: 5 (lower is better)
Translates to: RRAYLMKLRWTPRER*TPEQSMHKKTPYVM
Trigger: CATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGGTAGGCTCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS GCA 90 bp CTTGGCACCCAGCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTGATG +
Preference number: 5 (lower is better)
Translates to: LGTQLMKLRWTPRER*TPEQSMHKKTPYVM
Trigger: CATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGCTGGGTGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533243.5
ENST00000629231.2
CDS CCA 90 bp TGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCTaGGAACAGAATCATGTAAGGGGCCTTCCCAATCACACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: WLLTFWAPRPFLAPS*EQNHVRGLPNHTLL
Trigger: GAGGAGAGTGTGATTGGGAAGGCCCCTTACATGATTCTGTTCCCAGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS CCA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTaGGAGACAGAGCTGCGCAGCAAAGCAGAGCCAGGCATGAGACCA +
Preference number: 5 (lower is better)
Translates to: TGVSCSITCISDSTE*ETELRSKAEPGMRP
Trigger: TGGTCTCATGCCTGGCTCTGCTTTGCTGCGCAGCTCTGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS-3UTR CAA 90 bp GAGGGGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: EGQGEEWSVLLGSPTYNPNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...TGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: SRITADKTLHGHQPGEEGQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: SSQHPESNHSRQDPPWPPAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...TGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: VQRRKYQHRQTSPAASERAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTAGTTCCAGTGAGGCTTaGGGTGAGGTGCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSSSSEA*GEVPSR
Trigger: CCTGCTTGGCACCTCACCCAAAGCCTCACTGGAACT...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp AGAGGACAAGGGCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGAGTTCCAGTGAGGCTTaGGGTGAGGTGCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RGQGLVLTIPLTGVSASKSSSEA*GEVPSR
Trigger: CCTGCTTGGCACCTCACCCAAAGCCTCACTGGAACT...CTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGCCCTTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp CTTCTACCTTCCGCTTTCCCTACCTGGGGAAAGTCTGGACCCAGAATAAGCCATTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LLPSAFPTWGKSGPRISHSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...ATGGCTTATTCTGGGTCCAGACTTTCCCCAGGTAGGGAAAGCGGAAGGTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCAGACGCATGGAGGTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FPLSYDQSGAPGRPDAWRSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...CCTCCATGCGTCTGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTTCCTCCGCCTGCTTCTaGGCATCGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HRQTSPAASERILHSLGFSSACF*ASAACC
Trigger: GCAGCAGGCAGCCGATGCCAAGAAGCAGGCGGAGGA...AAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GCTGGTACTGACCATTCCCCTCACAGGAGTGAGCGCCTCAAAGGCCACCCCACAGATTGTCCTTGTACTTaGGGGGTCCAGAGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: AGTDHSPHRSERLKGHPTDCPCT*GVQRRK
Trigger: CTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATC...TGTGGGGTGGCCTTTGAGGCGCTCACTCCTGTGAGGGGAATGGTCAGTACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGGAAGAGTGGTCTGTGTaGCTTGGGAGCCCAACCTAC +
Preference number: 5 (lower is better)
Translates to: SRITADKTLHGHQPGEEGEEWSV*LGSPTY
Trigger: GTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTC...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS GCA 90 bp TTTCAGTTATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTaGCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATAT +
Preference number: 5 (lower is better)
Translates to: FQLSVPCLARAALPS*RIFSRYIWAARLLY
Trigger: ATATAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATAACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529455.5
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SPAWELWSSCCRHHRKPENRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: WPASSSQHPESNHSRQDPAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GCACTCCCCAGCTGCCGGATCTTCTCCCGGTACATCTGGGCAGCTCGGCTATTATTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: ALPSCRIFSRYIWAARLLLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...TAATAGCCGAGCTGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CAA 90 bp CAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGACGGCACTACTCATGTaGTCTATCCAAAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: QLGFLAPQSKQAWVEAAMTALLM*SIQRSV
Trigger: CACTGATCTTTGGATAGACAACATGAGTAGTGCCGT...CATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528708.5
CDS-3UTR CAA 90 bp CAGTATGGCAGGATAAGTGAGCAGCAGCTGTGGGGGCAGGACAGAAGGACAAGAGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QYGRISEQQLWGQDRRTRAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...TCTTGTCCTTCTGTCCTGCCCCCACAGCTGCTGCTCACTTATCCTGCCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: VQRRKYQHRQTSPAASERAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CAA 90 bp TGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: WETELRDTKPMPNLSACSASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...AGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PRQHLYPSGSQSFPLRKRASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...CCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp TGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCCATGGGACGGGTCTACCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: WQQQQQQVRSLFPHGTGLPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...TAGACCCGTCCCATGGGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGTTCCCAGCCACAGACTaGACACCCTGCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SRITADKTLHGHQPGEEGFPATD*TPCLNW
Trigger: CCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAA...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTAGTGGTCTGTGTTGCTaGGGAGCCCAACCTACAACC +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSSGLCC*GAQPTT
Trigger: GGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACT...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGAAGAGTGGTCTGTGTaGCTTGGGAGCCCAACCTAC +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQREEWSV*LGSPTY
Trigger: GTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCAGGCAGCATCTGTATCCCAGCGGGAGCCAAAGCTTTCCCCTAAGGAAAAGGCCAACTCTGTGGACCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: PRQHLYPSGSQSFPLRKRPTLWT*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGTCCACAGAGTTGG...CCTTTTCCTTAGGGGAAAGCTTTGGCTCCCGCTGGGATACAGATGCTGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS CCA 90 bp AGGATAGGCATCAGCATCACCGCACAAGAGACAATGCCCAGCAACTaGGTTCTCCTTCACGGAGCGTCACCCAGAGCCTTCTGTCCTTAC +
Preference number: 5 (lower is better)
Translates to: RIGISITAQETMPSN*VLLHGASPRAFCPY
Trigger: GTAAGGACAGAAGGCTCTGGGTGACGCTCCGTGAAGGAGAACCCAGTTGCTGGGCATTGTCTCTTGTGCGGTGATGCTGATGCCTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS-3UTR CAA 90 bp AAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: KASPAWELWSSCCRHHRKVWISV*FGSAAI
Trigger: AATGGCGGCGGAGCCGAACAAGACCGAAATCCAGAC...CTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp CAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: QHRQTSPAASERILHSLGVWISV*FGSAAI
Trigger: AATGGCGGCGGAGCCGAACAAGACCGAAATCCAGAC...CCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GGAAAGTCTGGACCCAGAATAAGCCATCGTGGGGGAACCCCCTTTCCCAGTATGAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GKSGPRISHRGGTPFPSMNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...CATACTGGGAAAGGGGGTTCCCCCACGATGGCTTATTCTGGGTCCAGACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp ACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGACATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: TGVSCSITCISDSTEWETSKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: AASERILHSLGFPAQSPASKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp ACCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAAGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: TIGQHSHFPSHRLDTLLKAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...TTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CAA 90 bp TTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCCGCACTCCCCAGCTGCTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: LSIQRSVPCLARAALPSCLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...GCAGCTGGGGAGTGCGGCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS-3UTR CAA 90 bp CTCCTGGTAGGCCAGACGCATGGAGGCGACCATGGACTCCTCCGCCTGCTTCTTGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: LLVGQTHGGDHGLLRLLLARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...AAGAAGCAGGCGGAGGAGTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CAA 90 bp GGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTGGGGGAAAAGGGATTGTCCTaGTACTTTGGGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GEEWSVLLGSPTYNPKVGEKGLS*YFGGPE
Trigger: CTCTGGACCCCCAAAGTACAAGGACAATCCCTTTTC...CCCCACCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CTGCTCACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCCCTTTCTTAGCTGAAAAGGGATTGTCCTaGTACTTTGGGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LLTFWAPRPFLAPSPFLAEKGLS*YFGGPE
Trigger: CTCTGGACCCCCAAAGTACAAGGACAATCCCTTTTC...AGCTAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CAA 90 bp CTGGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGAAAAGGGATTGTCCTaGTACTTTGGGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LAPSPLPCPYPRQHLYPSEKGLS*YFGGPE
Trigger: CTCTGGACCCCCAAAGTACAAGGACAATCCCTTTTC...GCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTTTCCCAGCCACAGACTaGACACCCTGCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSFPATD*TPCLNW
Trigger: CCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAA...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS GCA 90 bp TTGTCCTTGTACCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCGTACGTGATG +
Preference number: 5 (lower is better)
Translates to: LSLYLMKLRWTPRER*TPEQSMHKKTPYVM
Trigger: CATCACGTACGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGGTACAAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526342.5
CDS-3UTR CAA 90 bp TTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: FALTGVSCSITCISDSTENRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...CTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp TGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTCTTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: WETELRDTKPMPNLSACSLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...AGAGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CAA 90 bp AGTGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: SGRQSFGIPSPCPTFLPALVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...AGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CAA 90 bp GGCTCCTTCTCCTCTACCCTGTCCATACCCCAGGCAGCATCTGTATCCCAGCGGACGGCACTACTCATGTaGTCTATCCAAAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: GSFSSTLSIPQAASVSQRTALLM*SIQRSV
Trigger: CACTGATCTTTGGATAGACAACATGAGTAGTGCCGT...CCGCTGGGATACAGATGCTGCCTGGGGTATGGACAGGGTAGAGGAGAAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CAA 90 bp AAGGCAAAGCATCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCATCCCAGGCAGGGGGTaGAGTGTGTTCTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: KAKHPQPGNCGVLVAVTIIPGRG*SVFCEE
Trigger: TTCTTCACAGAACACACTCAACCCCCTGCCTGGGAT...GATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGATGCTTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRAAGFF*PMMELF
Trigger: GAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp ATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGGCCCCTAGGCCTTTCTaGGCACCCAGCCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: ILHSLGFPAQSPASQTARAPRPF*APSPFL
Trigger: TAAGAAAGGGCTGGGTGCCAAGAAAGGCCTAGGGGC...CCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CAA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: WPASSSQHPESNHSRQDPASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FGGPEAKVPTSSNKSSCEASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...CTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp AGTCGAATCACAGCAGACAAGACCCTCCATGGCCACCAACCCGGGGAAGAAGGGGAATTCATCACACCATaGGCCAGCACAGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: SRITADKTLHGHQPGEEGEFITP*ASTAIF
Trigger: GAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTC...CCCTTCTTCCCCGGGTTGGTGGCCATGGAGGGTCTTGTCTGCTGTGATTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGAGTGGTCTGTGTTGCTaGGGAGCCCAACCTACAACC +
Preference number: 5 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWSGLCC*GAQPTT
Trigger: GGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACT...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCAGAAGAGGCCACTGGCAGCAGCAGCAGCAGCAAGTCCGCAGCCTCTTTCCCTGCAGGGGCTTTATTTaGACACCACTTTGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: PRRGHWQQQQQQVRSLFPCRGFI*TPLCFN
Trigger: ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCA...GGGAAAGAGGCTGCGGACTTGCTGCTGCTGCTGCTGCCAGTGGCCTCTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TTTGGGGGTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGACTCTGTGGACCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: FGGPEAKVPTSSNKSSCETLWTL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGTCCACAGAGT...CTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CAA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACGCTTTTCAGTTCGCATaGGCATTCCCGCCGACCTGC +
Preference number: 5 (lower is better)
Translates to: REDFALTGVSCSITCISDAFQFA*AFPPTC
Trigger: GCAGGTCGGCGGGAATGCCAATGCGAACTGAAAAGC...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532438.5
CDS TCA 90 bp GCACAGGGCTGGGCCAGACCCCAACAGAAGGCTAGCTGTGTGTGGTaGCCTGTGAAGCACACCTCAGAATTCTTTACACATCAGCTTTGT +
Preference number: 5 (lower is better)
Translates to: AQGWARPQQKASCVW*PVKHTSEFFTHQLC
Trigger: ACAAAGCTGATGTGTAAAGAATTCTGAGGTGTGCTTCACAGGTCACCACACACAGCTAGCCTTCTGTTGGGGTCTGGCCCAGCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS CCA 90 bp CAGGCCTTGTTGGTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTaGATTTCGGTCTTGTTCGGCTCCGCCGCCATTTTCTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QALLVGTARSLLKRV*ISVLFGSAAIFSPS
Trigger: GGAAGGAGAGAAAATGGCGGCGGAGCCGAACAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000426335.6
ENST00000524586.1
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000526185.5
ENST00000527097.5
ENST00000527927.5
ENST00000528041.5
ENST00000528072.1
ENST00000528444.5
ENST00000529599.5
ENST00000530596.5
ENST00000530794.1
ENST00000531750.5
ENST00000532438.5
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp AGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGAACAGGCCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SERILHSLGFPAQSPASQNRPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGCCTGTT...CTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp AGAGCAAAGAAGAGAGCAGCGCGTGCTACGGGTGATTCTCAAGAAGGAAACGTGCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: RAKKRAARATGDSQEGNVQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...CACGTTTCCTTCTTGAGAATCACCCGTAGCACGCGCTGCTCTCTTCTTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCACAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp AGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGCAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: SERILHSLGFPAQSPASQQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...CTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000533243.5
CDS-3UTR CAA 90 bp ACCATTGGCCAGCACAGCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACAGTCGAAACAGGCCTaGTTGGTTGGAACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: TIGQHSHFPSHRLDTLLKQSKQA*LVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTG...TTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGCTGTGCTGGCCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CAA 90 bp GTCCAGAGGCGAAAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: VQRRKYQHRQTSPAASERAAGFF*PMMELF
Trigger: GAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGC...CCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTTTCGCCTCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
CDS-3UTR CAA 90 bp GCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTCCATGGGATTGTCCTTGTACTTaGGGGGTCCAGAGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: ASSSQHPESNHSRQDPPWDCPCT*GVQRRK
Trigger: CTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATC...CCATGGAGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTGATTGTCCTTGTACTTaGGGGGTCCAGAGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: QTSPAASERILHSLGFPADCPCT*GVQRRK
Trigger: CTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATC...AGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GCCATTTTCCCAGCCACAGACTTGACACCCTGCTTAAACTGGGCAATGTCCGCTGATTGTCCTTGTACTTaGGGGGTCCAGAGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: AIFPATDLTPCLNWAMSADCPCT*GVQRRK
Trigger: CTTTCGCCTCTGGACCCCCAAAGTACAAGGACAATC...AGCGGACATTGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAAAATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CAA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGGAAAAGGGATTGTCCTaGTACTTTGGGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLEKGLS*YFGGPE
Trigger: CTCTGGACCCCCAAAGTACAAGGACAATCCCTTTTC...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTCCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGAATTCATCACACCATaGGCCAGCACAGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSEFITP*ASTAIF
Trigger: GAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTC...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000533243.5
ENST00000627920.2
CDS-3UTR CAA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCAAGTGGTCTGTGTTGCTaGGGAGCCCAACCTACAACC +
Preference number: 5 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPSGLCC*GAQPTT
Trigger: GGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACT...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS GCA 90 bp ATCCACTATTTCAATCACAGTCCCCACTCCAGAGAATCAGATAGATaGTCAGTCTCCTGTGGCCTCTGTCCACACGGCCAGGCAGTAGGA +
Preference number: 5 (lower is better)
Translates to: IHYFNHSPHSRESDR*SVSCGLCPHGQAVG
Trigger: TCCTACTGCCTGGCCGTGTGGACAGAGGCCACAGGAGACTGAGCATCTATCTGATTCTCTGGAGTGGGGACTGTGATTGAAATAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS-3UTR CAA 90 bp GTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCAGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATT +
Preference number: 5 (lower is better)
Translates to: VHLGSSAIIFGVGIIGCAVWISV*FGSAAI
Trigger: AATGGCGGCGGAGCCGAACAAGACCGAAATCCAGAC...TGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp TACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAG +
Preference number: 5 (lower is better)
Translates to: YIWAARLLYLVLASLAVHAQLGF*APQSKQ
Trigger: CTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGC...ATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CAA 90 bp GGCAAGGGGAAGAGTGGTCTGTGTTGCTTGGGAGCCCAACCTACAACCCAAAGGGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: GKGKSGLCCLGAQPTTQRARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...CCTTTGGGTTGTAGGTTGGGCTCCCAAGCAACACAGACCACTCTTCCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp CCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: PQPGNCGVLVAVTIVSLSARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...ACTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp AGTGGGAGACAGAGCTTCGGGATACCAAGCCCATGCCCAACCTTTCTGCCTGCTGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SGRQSFGIPSPCPTFLPAARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...AGCAGGCAGAAAGGTTGGGCATGGGCTTGGTATCCCGAAGCTCTGTCTCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529455.5
ENST00000532478.5
CDS-3UTR CAA 90 bp AACGGCACTACTCATGTTGTCTATCCAAAGATCAGTGCCATGCCTAGCCAGGGCGAAGTTATTATCGCATaGGCATTCCCGCCGACCTGC +
Preference number: 5 (lower is better)
Translates to: NGTTHVVYPKISAMPSQGEVIIA*AFPPTC
Trigger: GCAGGTCGGCGGGAATGCCAATGCGATAATAACTTC...GCCCTGGCTAGGCATGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGATCGAAACAGGCCTTGTaGGTTGGAACTGCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRSKQAL*VGTARS
Trigger: GCTTCGCGCAGTTCCAACCAACAAGGCCTGTTTCGA...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCAGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KYQHRQTSPAASERILHSASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...TGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529455.5
ENST00000532438.5
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACGCGAGCGAGAGGATTTaGCACTCACTGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYASERI*HSLGFP
Trigger: AGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGC...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp CAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: QTSPAASERILHSLGFPAPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...AGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp CAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCACTGGGGGAATTCATCACACCATaGGCCAGCACAGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: QHRQTSPAASERILHSLGEFITP*ASTAIF
Trigger: GAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTC...CCCCAGTGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CAA 90 bp TGGCCAGCATCAAGCTCACAGCATCCAGAGTCGAATCACAGCAGACAAGACCCTGAATTCATCACACCATaGGCCAGCACAGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: WPASSSQHPESNHSRQDPEFITP*ASTAIF
Trigger: GAAAATGGCTGTGCTGGCCAATGGTGTGATGAATTC...AGGGTCTTGTCTGCTGTGATTCGACTCTGGATGCTGTGAGCTTGATGCTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp AAGTACCAACATCGTCAAACAAGTCCAGCTGCGAGCGAGAGGATTTTGCACTCATGTGGACCTTGTTGGTaGGAACTGCGCGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KYQHRQTSPAASERILHSCGPCW*ELREAS
Trigger: AGAGGCTTCGCGCAGTTCCAACCAACAAGGTCCACA...TGAGTGCAAAATCCTCTCGCTCGCAGCTGGACTTGTTTGACGATGTTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS TCA 90 bp GCTGGGCCAGACCCCAACAGAAGGCTAGCTGTGTGTGGTGACCTGTaGAGCACACCTCAGAATTCTTTACACATCAGCTTTGTTTATTCC +
Preference number: 5 (lower is better)
Translates to: AGPDPNRRLAVCGDL*STPQNSLHISFVYS
Trigger: GGAATAAACAAAGCTGATGTGTAAAGAATTCTGAGGTGTGCTTCACAGGTCACCACACACAGCTAGCCTTCTGTTGGGGTCTGGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS CCA 90 bp TATAGGAGTCGATTTCTAAGGAGGGCTACACTGCACCTCCATTTATaGAGGAGGAAACACCTAGGCCTACCCAGCAGGAACAGTGGACTT +
Preference number: 5 (lower is better)
Translates to: YRSRFLRRATLHLHL*RRKHLGLPSRNSGL
Trigger: AAGTCCACTGTTCCTGCTGGGTAGGCCTAGGTGTTTCCTCCTCCATAAATGGAGGTGCAGTGTAGCCCTCCTTAGAAATCGACTCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS-3UTR CAA 90 bp CGAGAGGATTTTGCACTCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACCCTAAGGAAAAGGGATaGTCCTTGTACTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: REDFALTGVSCSITCISDPKEKG*SLYFGG
Trigger: ACCCCCAAAGTACAAGGACAATCCCTTTTCCTTAGG...GTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGAGTGCAAAATCCTCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532478.5
ENST00000533243.5
CDS-3UTR CAA 90 bp TCCCCAGCCTGGGAACTGTGGAGTTCTTGTTGCCGTCACCATCGTAAGCCTGAGTGCAGGGGCTTTATTTaGACACCACTTTGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SPAWELWSSCCRHHRKPECRGFI*TPLCFN
Trigger: ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCA...CTCAGGCTTACGATGGTGACGGCAACAAGAACTCCACAGTTCCCAGGCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS CCA 90 bp CCATTTATGGAGGAGGAAACACCTAGGCCTACCCAGCAGGAACAGTaGACTTCATACGTGGTGTCCAAGACATCACATCAAAGCAAATGG +
Preference number: 5 (lower is better)
Translates to: PFMEEETPRPTQQEQ*TSYVVSKTSHQSKW
Trigger: CCATTTGCTTTGATGTGATGTCTTGGACACCACGTATGAAGTCCACTGTTCCTGCTGGGTAGGCCTAGGTGTTTCCTCCTCCATAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS-3UTR CAA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGATTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp AGAGCAAAGAAGAGAGCAGCGCGTGCTACGGGTGATTCTCAAGAAGGAAACGTGGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: RAKKRAARATGDSQEGNVARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...CACGTTTCCTTCTTGAGAATCACCCGTAGCACGCGCTGCTCTCTTCTTTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp CTCAAAGGCCACCCCACACACACACCACACATACGAAGTAACAAATCCTCCCCAACGGCACTACTCATGTaGTCTATCCAAAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: LKGHPTHTPHIRSNKSSPTALLM*SIQRSV
Trigger: CACTGATCTTTGGATAGACAACATGAGTAGTGCCGT...TGGGGAGGATTTGTTACTTCGTATGTGTGGTGTGTGTGTGGGGTGGCCTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524782.6
CDS-3UTR CAA 90 bp AAAAGGAGGCCAGATCACAGATGCCTCGGTGAGCCACTCTTGAGTGTGTTCTGTACGGCACTACTCATGTaGTCTATCCAAAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: KRRPDHRCLGEPLLSVFCTALLM*SIQRSV
Trigger: CACTGATCTTTGGATAGACAACATGAGTAGTGCCGT...ACAGAACACACTCAAGAGTGGCTCACCGAGGCATCTGTGATCTGGCCTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS-3UTR CAA 90 bp GAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACAGAGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: EGIKNVTEGPAFHSRWYRAAGFF*PMMELF
Trigger: GAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGC...TCTGTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426335.6
ENST00000524782.6
CDS-3UTR CAA 90 bp GAAGAAGGGATAAAGAATGTCACAGAGGGTCCTGCATTCCACAGCAGATGGTACGAAAAGGGATTGTCCTaGTACTTTGGGGGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: EEGIKNVTEGPAFHSRWYEKGLS*YFGGPE
Trigger: CTCTGGACCCCCAAAGTACAAGGACAATCCCTTTTC...GTACCATCTGCTGTGGAATGCAGGACCCTCTGTGACATTCTTTATCCCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp TCTGTAGCTTCTTTTCCTCTTTCTTACGATCAATCTGGAGCTCCTGGTAGGCCATTCCCAGCCACAGACTaGACACCCTGCTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SVASFPLSYDQSGAPGRPFPATD*TPCLNW
Trigger: CCAGTTTAAGCAGGGTGTCAAGTCTGTGGCTGGGAA...TGGCCTACCAGGAGCTCCAGATTGATCGTAAGAAAGAGGAAAAGAAGCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533243.5
CDS-3UTR CAA 90 bp CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTGCAGGGGCTTTATTTaGACACCACTTTGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: LRPTGSQALQGLYFDTTLCRGFI*TPLCFN
Trigger: ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCA...CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000627920.2
CDS-3UTR CAA 90 bp GTACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCACAAGAAGGAAACGTGTaGGCTGTAGGAGACATCTCC +
Preference number: 5 (lower is better)
Translates to: VHLGSSAIIFGVGIIGCAQEGNV*AVGDIS
Trigger: GGAGATGTCTCCTACAGCCAACACGTTTCCTTCTTG...TGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS-3UTR CAA 90 bp TCACTGGGGTTTCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTGGGAGATGGAGCTTTTCAGTTTaGAGTGTGTTCTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLGFPAQSPASQTARSGRWSFSV*SVFCEE
Trigger: TTCTTCACAGAACACACTCAAAACTGAAAAGCTCCA...TCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGAAACCCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532478.5
CDS-3UTR CAA 90 bp TACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATTTGGTGTTGGCATCATaGGCTGTGCATCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: YIWAARLLYLVLASLAVHLVLAS*AVHPCW
Trigger: CCAACATGGATGCACAGCCAATGATGCCAACACCAA...ATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS CCA 90 bp AGGAAACACCTAGGCCTACCCAGCAGGAACAGTGGACTTCATACGTaGTGTCCAAGACATCACATCAAAGCAAATGGAATCTACAACCAT +
Preference number: 5 (lower is better)
Translates to: RKHLGLPSRNSGLHT*CPRHHIKANGIYNH
Trigger: ATGGTTGTAGATTCCATTTGCTTTGATGTGATGTCTTGGACACCACGTATGAAGTCCACTGTTCCTGCTGGGTAGGCCTAGGTGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS TCA 90 bp GTGGTGTCCAAGACATCACATCAAAGCAAATGGAATCTACAACCATaGTCACAGAAGGCCTGGGCCTTGGTAAATTGCCTGTCAAGAACA +
Preference number: 5 (lower is better)
Translates to: VVSKTSHQSKWNLQP*SQKAWALVNCLSRT
Trigger: TGTTCTTGACAGGCAATTTACCAAGGCCCAGGCCTTCTGTGATCATGGTTGTAGATTCCATTTGCTTTGATGTGATGTCTTGGACACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS-3UTR CAA 90 bp TACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATGCTCGGCTATTATATTaGGTGTTGGCATCATTGGCT +
Preference number: 5 (lower is better)
Translates to: YIWAARLLYLVLASLAVHARLLY*VLASLA
Trigger: AGCCAATGATGCCAACACCAAATATAATAGCCGAGC...ATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524586.1
ENST00000528708.5
ENST00000529439.5
CDS-3UTR CAA 90 bp TACATCTGGGCAGCTCGGCTATTATATTTGGTGTTGGCATCATTGGCTGTGCATACGGCACTACTCATGTaGTCTATCCAAAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: YIWAARLLYLVLASLAVHTALLM*SIQRSV
Trigger: CACTGATCTTTGGATAGACAACATGAGTAGTGCCGT...ATGCACAGCCAATGATGCCAACACCAAATATAATAGCCGAGCTGCCCAGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524586.1
ENST00000528708.5
CDS TCA 90 bp TTTCAGAAAATAGCTTATGGTGGTGTTATAGAACAGAGAACCCTCTaGACAGGGAAAACGACAGGGCCTCTTAGGGAGTCGTGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: FQKIAYGGVIEQRTL*TGKTTGPLRESCKV
Trigger: AACTTTGCACGACTCCCTAAGAGGCCCTGTCGTTTTCCCTGTTCAGAGGGTTCTCTGTTCTATAACACCACCATAAGCTATTTTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS TCA 90 bp CTTATGACAGCGAAGTTATTATCTATACAGGATGATACACGCTACTaGCACCGGTTTTTCAGAGATAAAGTTTCTCGAAATTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LMTAKLLSIQDDTRY*HRFFRDKVSRNSCK
Trigger: TTTGCAGGAATTTCGAGAAACTTTATCTCTGAAAAACCGGTGTCAGTAGCGTGTATCATCCTGTATAGATAATAACTTCGCTGTCATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CCA 72 bp CGAGGCAGCCACTCTCCCTTGTTGCCCAGACACCCCTaGCCGGCCGGGTGGAAACACGGCAACCGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: RGSHSPLLPRHP*PAGWKHGNRAE
Trigger: CTCCGCGCGGTTGCCGTGTTTCCACCCGGCCGGCCAGGGGTGTCTGGGCAACAAGGGAGAGTGGCTGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS TCA 72 bp CCGCCATTTTCTCTCCTTCCCAGACACAACCGCGGCTaGCGGGTCCCGCCGCGGGCCAATCCACGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: PPFSLLPRHNRG*RVPPRANPRRG
Trigger: TCCCCGCCGTGGATTGGCCCGCGGCGGGACCCGTCAGCCGCGGTTGTGTCTGGGAAGGAGAGAAAATGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS CCA 72 bp TCAGCGGTGCCTGGGCCAGCCGAGGGGTGGGGTGATTaGAGTCCGATCTGGACCAATGGGCAGCCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: SAVPGPAEGWGD*SPIWTNGQPAG
Trigger: TCCCGCCGGCTGCCCATTGGTCCAGATCGGACTCCAATCACCCCACCCCTCGGCTGGCCCAGGCACCGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS CCA 72 bp AGGCCGGCCTCAGCGGTGCCTGGGCCAGCCGAGGGGTaGGGTGATTGGAGTCCGATCTGGACCAATGGGCAG +
Preference number: 6 (lower is better)
Translates to: RPASAVPGPAEG*GDWSPIWTNGQ
Trigger: CTGCCCATTGGTCCAGATCGGACTCCAATCACCCCACCCCTCGGCTGGCCCAGGCACCGCTGAGGCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426335.6
ENST00000533243.5
ENST00000627920.2
CDS CAA 90 bp CACCGAATTCAGAGCGGCCCAAGTCGAGGCAGCCACTCTCCCTTGTaGCCCAGACACCCCTGGCCGGCCGGGTGGAAACACGGCAACCGC +
Preference number: 6 (lower is better)
Translates to: HRIQSGPSRGSHSPL*PRHPWPAGWKHGNR
Trigger: GCGGTTGCCGTGTTTCCACCCGGCCGGCCAGGGGTGTCTGGGCAACAAGGGAGAGTGGCTGCCTCGACTTGGGCCGCTCTGAATTCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CCA 72 bp AGACGGACCGCCCATGTGCCAAAGGGCCCACACAGGTaGTTCCCTCTGGCAGGAGGCTACCGGACCCTCTCG +
Preference number: 6 (lower is better)
Translates to: RRTAHVPKGPHR*FPLAGGYRTLS
Trigger: CGAGAGGGTCCGGTAGCCTCCTGCCAGAGGGAACCACCTGTGTGGGCCCTTTGGCACATGGGCGGTCCGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CAA 90 bp TCCCACCGAATTCAGAGCGGCCCAAGTCGAGGCAGCCACTCTCCCTaGTTGCCCAGACACCCCTGGCCGGCCGGGTGGAAACACGGCAAC +
Preference number: 6 (lower is better)
Translates to: SHRIQSGPSRGSHSP*LPRHPWPAGWKHGN
Trigger: GTTGCCGTGTTTCCACCCGGCCGGCCAGGGGTGTCTGGGCAACAAGGGAGAGTGGCTGCCTCGACTTGGGCCGCTCTGAATTCGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CCA 72 bp ACCAGCATGGCCAAGACAATAGTGCTCCGCTGGAGCTaGGCATGGGCGGCTCACACAGCCCCAGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: TSMAKTIVLRWS*AWAAHTAPAEP
Trigger: GGGCTCTGCTGGGGCTGTGTGAGCCGCCCATGCCCAGCTCCAGCGGAGCACTATTGTCTTGGCCATGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS GCA 72 bp AAGTTTTGGCCCAGAGGCGGAGACGGACCGCCCATGTaGCAAAGGGCCCACACAGGTGGTTCCCTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: KFWPRGGDGPPM*QRAHTGGSLWQ
Trigger: CTGCCAGAGGGAACCACCTGTGTGGGCCCTTTGGCACATGGGCGGTCCGTCTCCGCCTCTGGGCCAAAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528072.1
CDS CCA 72 bp GTGAGGCTTTGGGTGAGGTGCCAAGCAGGTCTGTGTTaGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTCT +
Preference number: 6 (lower is better)
Translates to: VRLWVRCQAGLC*GHAPAVPGHCS
Trigger: AGAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAACACAGACCTGCTTGGCACCTCACCCAAAGCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524727.5
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000527097.5
ENST00000528444.5
CDS CCA 72 bp AGCCCAACCAGCATGGCCAAGACAATAGTGCTCCGCTaGAGCTGGGCATGGGCGGCTCACACAGCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SPTSMAKTIVLR*SWAWAAHTAPA
Trigger: TGCTGGGGCTGTGTGAGCCGCCCATGCCCAGCTCCAGCGGAGCACTATTGTCTTGGCCATGCTGGTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS CAA 72 bp AGTGAGGCTTTGGGTGAGGTGCCAAGCAGGTCTGTGTaGGGGCCATGCTCCGGCTGTGCCAGGCCACTGCTC +
Preference number: 6 (lower is better)
Translates to: SEALGEVPSRSV*GPCSGCARPLL
Trigger: GAGCAGTGGCCTGGCACAGCCGGAGCATGGCCCCAACACAGACCTGCTTGGCACCTCACCCAAAGCCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524727.5
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000527097.5
ENST00000528444.5
CDS CCA 72 bp ACGCCTGCCCGCTGGCATACTGACCCAGTGAGGCTTTaGGTGAGGTGCCAAGCAGGTCTGTGTTGGGGCCAT +
Preference number: 6 (lower is better)
Translates to: TPARWHTDPVRL*VRCQAGLCWGH
Trigger: ATGGCCCCAACACAGACCTGCTTGGCACCTCACCCAAAGCCTCACTGGGTCAGTATGCCAGCGGGCAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS CAA 72 bp CTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTaGGCACCCAGCTGGGAACAGAATCATGTAAGGGGC +
Preference number: 6 (lower is better)
Translates to: LWLLTFWAPRPF*APSWEQNHVRG
Trigger: GCCCCTTACATGATTCTGTTCCCAGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS GCA 72 bp CGTCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCG +
Preference number: 6 (lower is better)
Translates to: RLMKLRWTPRER*TPEQSMHKKTP
Trigger: CGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528041.5
CDS GCA 72 bp CAGCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCG +
Preference number: 6 (lower is better)
Translates to: QLMKLRWTPRER*TPEQSMHKKTP
Trigger: CGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533243.5
ENST00000629231.2
CDS CAA 90 bp TCACTGAAGCTCTGGCTGCTCACCTTCTGGGCCCCTAGGCCTTTCTaGGCACCCAGCTGGGAACAGAATCATGTAAGGGGCCTTCCCAAT +
Preference number: 6 (lower is better)
Translates to: SLKLWLLTFWAPRPF*APSWEQNHVRGLPN
Trigger: ATTGGGAAGGCCCCTTACATGATTCTGTTCCCAGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGTGAGCAGCCAGAGCTTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS GCA 72 bp TACCTGATGAAGCTCAGATGGACGCCCAGGGAGCGGTaGACCCCGGAACAGTCAATGCACAAGAAAACACCG +
Preference number: 6 (lower is better)
Translates to: YLMKLRWTPRER*TPEQSMHKKTP
Trigger: CGGTGTTTTCTTGTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCTTCATCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526342.5
ENST00000528072.1
CDS GCA 72 bp TTCTTGGCACCCAGCGCATTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAACCAGTTCCAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: FLAPSALAFPPT*IHLSWNQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGCTGGGTGCCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527927.5
ENST00000627920.2
CDS CCA 72 bp ACCTTCTGGGCCCCTAGGCCTTTCTTGGCACCCAGCTaGGAACAGAATCATGTAAGGGGCCTTCCCAATCAC +
Preference number: 6 (lower is better)
Translates to: TFWAPRPFLAPS*EQNHVRGLPNH
Trigger: GTGATTGGGAAGGCCCCTTACATGATTCTGTTCCCAGCTGGGTGCCAAGAAAGGCCTAGGGGCCCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526948.1
CDS CCA 72 bp ATCAGCATCACCGCACAAGAGACAATGCCCAGCAACTaGGTTCTCCTTCACGGAGCGTCACCCAGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: ISITAQETMPSN*VLLHGASPRAF
Trigger: GAAGGCTCTGGGTGACGCTCCGTGAAGGAGAACCCAGTTGCTGGGCATTGTCTCTTGTGCGGTGATGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS CAA 90 bp ATGCACAAGAAAACACCGTACGTGATGCTGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAGGCCTTGTTGGTTGGAACTGCGCGA +
Preference number: 6 (lower is better)
Translates to: MHKKTPYVMLAQLGF*APQSKQALLVGTAR
Trigger: TCGCGCAGTTCCAACCAACAAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTTCTTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524586.1
ENST00000524727.5
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000526185.5
ENST00000526342.5
ENST00000527097.5
ENST00000527927.5
ENST00000528041.5
ENST00000528072.1
ENST00000528444.5
ENST00000529455.5
ENST00000529599.5
ENST00000530596.5
ENST00000530794.1
ENST00000531750.5
ENST00000532438.5
ENST00000533243.5
ENST00000533939.5
ENST00000627920.2
ENST00000629231.2
CDS CCA 72 bp TCCTGCTCAATCACCTGCATCTCAGACAGCACGGAGTaGGAGACAGAGCTTTCTGCCTGCTCTCGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SCSITCISDSTE*ETELSACSRFF
Trigger: GAAGAAGCGAGAGCAGGCAGAAAGCTCTGTCTCCCACTCCGTGCTGTCTGAGATGCAGGTGATTGAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527776.5
CDS CCA 72 bp TGGAAGGTGAGGGAAGTAGAAGGAGCTTTACCGCATTaGCATTCCCGCCGACCTGCATACACCTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: WKVREVEGALPH*HSRRPAYTSAG
Trigger: TCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGGTAAAGCTCCTTCTACTTCCCTCACCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 72 bp AAAACACCGTACGTGATGCTGGCCCAACTCGGATTCTaGGCGCCGCAGTCGAAACAGGCCTTGTTGGTTGGA +
Preference number: 6 (lower is better)
Translates to: KTPYVMLAQLGF*APQSKQALLVG
Trigger: TCCAACCAACAAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACGGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524586.1
ENST00000524727.5
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000526185.5
ENST00000526342.5
ENST00000527097.5
ENST00000527927.5
ENST00000528041.5
ENST00000528072.1
ENST00000528444.5
ENST00000529455.5
ENST00000529599.5
ENST00000530596.5
ENST00000530794.1
ENST00000531750.5
ENST00000532438.5
ENST00000533243.5
ENST00000533939.5
ENST00000627920.2
ENST00000629231.2
CDS CAA 72 bp ATGGAAGGTGAGGGAAGTAGAAGGAGCTTTACCGCATaGGCATTCCCGCCGACCTGCATACACCTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: MEGEGSRRSFTA*AFPPTCIHLSW
Trigger: CCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGGTAAAGCTCCTTCTACTTCCCTCACCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS GCA 72 bp TTCAATCACAGTCCCCACTCCAGAGAATCAGATAGATaGTCAGTCTCCTGTGGCCTCTGTCCACACGGCCAG +
Preference number: 6 (lower is better)
Translates to: FNHSPHSRESDR*SVSCGLCPHGQ
Trigger: CTGGCCGTGTGGACAGAGGCCACAGGAGACTGAGCATCTATCTGATTCTCTGGAGTGGGGACTGTGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS GCA 72 bp AGAAGGAGCTTTACCGCATTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAACCAGTTCCAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: RRSFTALAFPPT*IHLSWNQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGGTAAAGCTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS GCA 72 bp GGAGCTTTTCAGTTCGCATTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAACCAGTTCCAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: GAFQFALAFPPT*IHLSWNQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGAACTGAAAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532438.5
CDS CAA 90 bp GTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTGGATTTCGGTCTaGTTCGGCTCCGCCGCCATTTTCTCTCCTTCCCAGACACAACCG +
Preference number: 6 (lower is better)
Translates to: VGTARSLLKRVWISV*FGSAAIFSPSQTQP
Trigger: CGGTTGTGTCTGGGAAGGAGAGAAAATGGCGGCGGAGCCGAACAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAGTTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000426335.6
ENST00000524782.6
ENST00000525314.5
ENST00000527927.5
ENST00000528041.5
ENST00000528072.1
ENST00000529599.5
ENST00000530794.1
ENST00000531750.5
ENST00000532438.5
ENST00000533243.5
ENST00000627920.2
CDS CCA 72 bp CGATTTCTAAGGAGGGCTACACTGCACCTCCATTTATaGAGGAGGAAACACCTAGGCCTACCCAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RFLRRATLHLHL*RRKHLGLPSRN
Trigger: GTTCCTGCTGGGTAGGCCTAGGTGTTTCCTCCTCCATAAATGGAGGTGCAGTGTAGCCCTCCTTAGAAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 90 bp CCTTTCTTGGCACCCAGCCCTTTCTTAGCTGCTGCTGGCTTCTTCTaGCCAATGATGGAGCTTTTCAGTTCCAGTGAGGCTTTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: PFLAPSPFLAAAGFF*PMMELFSSSEALGE
Trigger: CTCACCCAAAGCCTCACTGGAACTGAAAAGCTCCATCATTGGCAAGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTGGGTGCCAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524782.6
ENST00000525398.5
CDS TCA 72 bp GTGTTGGGGCCATGCTCCGGCTTTGAGTGTGTTCTGTaGAGAAATCAGAGTCCTTCTTCTCTGGGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: VLGPCSGFECVL*RNQSPSSLGSD
Trigger: ATCACTCCCCAGAGAAGAAGGACTCTGATTTCTTCACAGAACACACTCAAAGCCGGAGCATGGCCCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529599.5
CDS GCA 72 bp AGCGAAGTTATTATCGCATTGGCATTCCCGCCGACCTaGATACACCTCAGCTGGAACCAGTTCCAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: SEVIIALAFPPT*IHLSWNQFQLE
Trigger: TTCCAACTGGAACTGGTTCCAGCTGAGGTGTATGCAGGTCGGCGGGAATGCCAATGCGATAATAACTTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS CCA 72 bp TTGGTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTaGATTTCGGTCTTGTTCGGCTCCGCCGCCATTTTC +
Preference number: 6 (lower is better)
Translates to: LVGTARSLLKRV*ISVLFGSAAIF
Trigger: GAAAATGGCGGCGGAGCCGAACAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAGTTCCAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 21 transcripts:
ENST00000395449.7
ENST00000426335.6
ENST00000524586.1
ENST00000524727.5
ENST00000524782.6
ENST00000525314.5
ENST00000525398.5
ENST00000526185.5
ENST00000526342.5
ENST00000527097.5
ENST00000527927.5
ENST00000528041.5
ENST00000528072.1
ENST00000528444.5
ENST00000529599.5
ENST00000530596.5
ENST00000530794.1
ENST00000531750.5
ENST00000532438.5
ENST00000533243.5
ENST00000627920.2
CDS CCA 72 bp GAGGAGGAAACACCTAGGCCTACCCAGCAGGAACAGTaGACTTCATACGTGGTGTCCAAGACATCACATCAA +
Preference number: 6 (lower is better)
Translates to: EEETPRPTQQEQ*TSYVVSKTSHQ
Trigger: TTGATGTGATGTCTTGGACACCACGTATGAAGTCCACTGTTCCTGCTGGGTAGGCCTAGGTGTTTCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 90 bp ATGGAATCTACAACCATGATCACAGAAGGCCTGGGCCTTGGTAAATaGCCTGTCAAGAACAACTGGGAAAACGGTTCCTTGTGGGCACTC +
Preference number: 6 (lower is better)
Translates to: MESTTMITEGLGLGK*PVKNNWENGSLWAL
Trigger: GAGTGCCCACAAGGAACCGTTTTCCCAGTTGTTCTTGACAGGCAATTTACCAAGGCCCAGGCCTTCTGTGATCATGGTTGTAGATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS TCA 72 bp GAAGGAAACGTGTTGGCTGTAGGAGACATCTCCTTATaGCAGCGAAGTTATTATCGCATTGGCATTCCCGCC +
Preference number: 6 (lower is better)
Translates to: EGNVLAVGDISL*QRSYYRIGIPA
Trigger: GGCGGGAATGCCAATGCGATAATAACTTCGCTGTCATAAGGAGATGTCTCCTACAGCCAACACGTTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524586.1
CDS CCA 72 bp CTAGGCCTACCCAGCAGGAACAGTGGACTTCATACGTaGTGTCCAAGACATCACATCAAAGCAAATGGAATC +
Preference number: 6 (lower is better)
Translates to: LGLPSRNSGLHT*CPRHHIKANGI
Trigger: GATTCCATTTGCTTTGATGTGATGTCTTGGACACCACGTATGAAGTCCACTGTTCCTGCTGGGTAGGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 72 bp ACAACCATGATCACAGAAGGCCTGGGCCTTGGTAAATaGCCTGTCAAGAACAACTGGGAAAACGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: TTMITEGLGLGK*PVKNNWENGSL
Trigger: CAAGGAACCGTTTTCCCAGTTGTTCTTGACAGGCAATTTACCAAGGCCCAGGCCTTCTGTGATCATGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 90 bp CAGGCCTTATACACCAGCCCACCCAGATTCATCAATTCAAAGGGCTaGGCTCTAAAATCAGTGTTGCATCCACTATTTCAATCACAGTCC +
Preference number: 6 (lower is better)
Translates to: QALYTSPPRFINSKG*ALKSVLHPLFQSQS
Trigger: GGACTGTGATTGAAATAGTGGATGCAACACTGATTTTAGAGCCAAGCCCTTTGAATTGATGAATCTGGGTGGGCTGGTGTATAAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS CAA 72 bp TGTGAAGCACACCTCAGAATTCTTTACACATCAGCTTaGTTTATTCCACGTAGGAGTTCCCTGGCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: CEAHLRILYTSA*FIPRRSSLASD
Trigger: GTCACTGGCCAGGGAACTCCTACGTGGAATAAACAAAGCTGATGTGTAAAGAATTCTGAGGTGTGCTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525635.1
CDS CAA 72 bp GAACAACTGGGAAAACGGTTCCTTGTGGGCACTCACTaGAGTGTGTTCTGTGAAGAAATCAGAGTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: EQLGKRFLVGTH*SVFCEEIRVLL
Trigger: AAGAAGGACTCTGATTTCTTCACAGAACACACTCAAGTGAGTGCCCACAAGGAACCGTTTTCCCAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS CAA 90 bp CCACCCAGATTCATCAATTCAAAGGGCTTGGCTCTAAAATCAGTGTaGCATCCACTATTTCAATCACAGTCCCCACTCCAGAGAATCAGA +
Preference number: 6 (lower is better)
Translates to: PPRFINSKGLALKSV*HPLFQSQSPLQRIR
Trigger: TCTGATTCTCTGGAGTGGGGACTGTGATTGAAATAGTGGATGCAACACTGATTTTAGAGCCAAGCCCTTTGAATTGATGAATCTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524727.5
CDS TCA 72 bp ATGTGCTCCATCTCACCGACTCCTCCCAGCAGCCCTTaGAGACAGGCTTTAAATCCCTTTAAATCTTTAAAT +
Preference number: 6 (lower is better)
Translates to: MCSISPTPPSSP*RQALNPFKSLN
Trigger: ATTTAAAGATTTAAAGGGATTTAAAGCCTGTCTTCAAGGGCTGCTGGGAGGAGTCGGTGAGATGGAGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526948.1
ENST00000527097.5
CDS TCA 72 bp GAAGGAAACGTGTTGGCTGTAGGAGACATCTCCTTATaGCAGCGAAGTTATTATCTATACAGGATGATACAC +
Preference number: 6 (lower is better)
Translates to: EGNVLAVGDISL*QRSYYLYRMIH
Trigger: GTGTATCATCCTGTATAGATAATAACTTCGCTGTCATAAGGAGATGTCTCCTACAGCCAACACGTTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526185.5
CDS TCA 72 bp GCGAAGTTATTATCTATACAGGATGATACACGCTACTaGCACCGGTTTTTCAGAGATAAAGTTTCTCGAAAT +
Preference number: 6 (lower is better)
Translates to: AKLLSIQDDTRY*HRFFRDKVSRN
Trigger: ATTTCGAGAAACTTTATCTCTGAAAAACCGGTGTCAGTAGCGTGTATCATCCTGTATAGATAATAACTTCGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526185.5