RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARFGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101199

Ensembl transcript IDs: ENST00000353546.7, ENST00000370275.8, ENST00000370283.9, ENST00000395285.3, ENST00000468975.6, ENST00000518601.6, ENST00000518618.2, ENST00000518691.1, ENST00000518794.6, ENST00000519273.6, ENST00000519531.5, ENST00000519604.5, ENST00000520022.2, ENST00000520485.5, ENST00000522403.6, ENST00000522959.5, ENST00000523114.5, ENST00000523460.5, ENST00000524192.6, ENST00000547204.5, ENST00000549047.5, ENST00000549076.1, ENST00000550188.1

Found 1127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCACCCTCCGTGGACGGGGTCTCGGCC +
Preference number: 1 (lower is better)
Translates to: QGEAPAPVPGPPART*RRERPSPSVDGVSA
Trigger: GGCCGAGACCCCGTCCACGGAGGGTGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp GCACAGGCATCCCCTGCTCAGCTCCTGAACCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCC +
Preference number: 1 (lower is better)
Translates to: AQASPAQLLNPAPPA*PRPLSHPPASGPRA
Trigger: GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp CCACGCACAGGCATCCCCTGCTCAGCTCCTGAACCCGGCCCCTCCTaGCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAG +
Preference number: 1 (lower is better)
Translates to: PRTGIPCSAPEPGPS*LATSAIAPSCIRAE
Trigger: CTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp GGTGGGACGAGCACAGGGGCTGAAGGGCCCAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGC +
Preference number: 1 (lower is better)
Translates to: GGTSTGAEGPRLLQE*CRRRPGSGVTREHG
Trigger: GCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAGCCCCTGTGCTCGTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp CCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGG +
Preference number: 1 (lower is better)
Translates to: PSHHQWARPAALPSW*PPRPPRRRCCCSCW
Trigger: CCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 90 bp AGGCCGAGCCCCACACCTCCCAGCTGTCCGAGCTCCTCCTCTCGGTaGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGC +
Preference number: 1 (lower is better)
Translates to: RPSPTPPSCPSSSSR*RCPRTSSCRCSGTC
Trigger: GCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTGGGGCTCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR TCA 90 bp TCCCTAGACCCAGGCACCACGCACAGGCATCCCCTGCTCAGCTCCTaGACCCGGCCCCTCCTGCCTGGCCACGTCCGCTATCGCACCCTC +
Preference number: 1 (lower is better)
Translates to: SLDPGTTHRHPLLSS*TRPLLPGHVRYRTL
Trigger: GAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCGTGGTGCCTGGGTCTAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp GGGACGAGCACAGGGGCTGAAGGGCCCAGGCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAA +
Preference number: 1 (lower is better)
Translates to: GTSTGAEGPRLLQEC*RRRPGSGVTREHGQ
Trigger: TTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAGCCCCTGTGCTCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp GTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCT +
Preference number: 1 (lower is better)
Translates to: VLVVPAIISGHGRRH*LLGALPALPAVAVA
Trigger: AGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 90 bp TGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGT +
Preference number: 1 (lower is better)
Translates to: CPSHHQWARPAALPS*CPPRPPRRRCCCSC
Trigger: ACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 90 bp GGCGCAGTGGGCCCTACCAGTTCTGGTTGTCCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCT +
Preference number: 1 (lower is better)
Translates to: GAVGPTSSGCPSHHQ*ARPAALPSWCPPRP
Trigger: AGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCCCACTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 90 bp GGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTaGGGACGGGGGCGCAGTGGGCCCTACCAGTTCTGGTTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: GTTRAECKHEVARGR*GRGRSGPYQFWLSQ
Trigger: CTGGGACAACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR TCA 90 bp GTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGGCTaGAGGGCCCAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGG +
Preference number: 1 (lower is better)
Translates to: VLQVAESLGWDEHRG*RAQAAPGVLQTATG
Trigger: CCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAGCCCCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp TCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTaGCCGCACCTGCAGAAGGGAAAGGCCATCACCCTCCGTGGACGG +
Preference number: 1 (lower is better)
Translates to: SHTARRGPSTGPRPT*PHLQKGKAITLRGR
Trigger: CCGTCCACGGAGGGTGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp GTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTaGCATGTGGCGGGCACCGGTGTGCAGGGCAGCCCCATCCTGGGG +
Preference number: 1 (lower is better)
Translates to: VTRGSTSSSPRGGEG*HVAGTGVQGSPILG
Trigger: CCCCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGG +
Preference number: 1 (lower is better)
Translates to: TPHAQAAHTRVSLGS*LPRRCPHTAVADSW
Trigger: CCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR GCA 90 bp TGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTaGAGCCCACCTCCCAGCAAGCCACGCAGAGCCCCGGCCTTGAGT +
Preference number: 1 (lower is better)
Translates to: CVVNWPLERSHRPLC*SPPPSKPRRAPALS
Trigger: ACTCAAGGCCGGGGCTCTGCGTGGCTTGCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp TACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGCAAGCCACGCAGAGCCCCGGCCTTG +
Preference number: 1 (lower is better)
Translates to: YCVVNWPLERSHRPL*CSPPPSKPRRAPAL
Trigger: CAAGGCCGGGGCTCTGCGTGGCTTGCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp CGGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAGCACTTCCAAAGGTCTCCCAGAAGC +
Preference number: 1 (lower is better)
Translates to: RWRCPRTSSCRCSGT*GSWWAQHFQRSPRS
Trigger: GCTTCTGGGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR GCA 90 bp AGCTCCTCCTCTCGGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCAAAGG +
Preference number: 1 (lower is better)
Translates to: SSSSRWRCPRTSSCR*SGTCGSWWAQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGAGAGGAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 90 bp CGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGCAGCCCACCT +
Preference number: 1 (lower is better)
Translates to: RHVAGPRPQRYCVVN*PLERSHRPLCCSPP
Trigger: AGGTGGGCTGCAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp GGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGAGCACAGGGGCTGAAGGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: GGLAEISVPSCSASG*VPRVGRAQGLKGPG
Trigger: GCCTGGGCCCTTCAGCCCCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp TCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGC +
Preference number: 1 (lower is better)
Translates to: SLTARHVAGPRPQRY*VVNWPLERSHRPLC
Trigger: GCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCT +
Preference number: 1 (lower is better)
Translates to: QAALGRYHAAAHVSA*RKTLKDPHAQLSGA
Trigger: AGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp AGGCCGTGTCTGGTGAACCTGGTGAACTTGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGAC +
Preference number: 1 (lower is better)
Translates to: RPCLVNLVNLVVGRC*CRGATEGYDRRGSD
Trigger: GTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCAAGTTCACCAGGTTCACCAGACACGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp CCCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACAC +
Preference number: 1 (lower is better)
Translates to: PASDLRSNYSRWLLR*SNPSVAAKDTGPPH
Trigger: GTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp CCATCACCCTCCGTGGACGGGGTCTCGGCCACCACATCCACCTTCTaGAGGTGGCCCAGACACCTCCACGCTGCTGACTGCACTTCCCAT +
Preference number: 1 (lower is better)
Translates to: PSPSVDGVSATTSTF*RWPRHLHAADCTSH
Trigger: ATGGGAAGTGCAGTCAGCAGCGTGGAGGTGTCTGGGCCACCTTCAGAAGGTGGATGTGGTGGCCGAGACCCCGTCCACGGAGGGTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp CCCCGAGGAAGGCACCCTCCTGGGCGGGGACAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGCACATGTGGAA +
Preference number: 1 (lower is better)
Translates to: PRGRHPPGRGQTLAP*CQVKVLAWKQAHVE
Trigger: TTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCTTCCTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CAACGAGAAGGGACACCTCACGTCGCTGACAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGA +
Preference number: 1 (lower is better)
Translates to: QREGTPHVADSSARG*SQAPEILRSELAAG
Trigger: TCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp TCTGATGCCCCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCC +
Preference number: 1 (lower is better)
Translates to: SDAPPLTSGPTTAGG*FGDQIPPWQPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp GGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGGGC +
Preference number: 1 (lower is better)
Translates to: GPTTAGGCFGDQIPP*QPRTPALHTSYQEG
Trigger: GCCCTCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp TCCCGTATGCTTTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAG +
Preference number: 1 (lower is better)
Translates to: SRMLYWNAVRSAPST*ALTHSKERPQHRSQ
Trigger: CTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAAAGCATACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGGTCTCCCAGAAGCTCTGGTCTATGT +
Preference number: 1 (lower is better)
Translates to: PRTSSCRCSGTCGSW*AQHFQRSPRSSGLC
Trigger: ACATAGACCAGAGCTTCTGGGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR TCA 90 bp TTGTGCTGGCTGCTTTCCCGGTGGCTTCTCAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: LCWLLSRWLLSTLSL*CPASDLRSNYSRWL
Trigger: CAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCAGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp ACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: TSAIAPSCIRAEGPP*APFSSRVFQDGQVP
Trigger: TGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 90 bp GGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACG +
Preference number: 1 (lower is better)
Translates to: GEHLTYKLHELRAHA*LAKTEGHTGQTRET
Trigger: CGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 90 bp CGTGGAAACAGGCACATGTGGAACACCACATCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: RGNRHMWNTTSHCPR*SPPLLGALSPPGSK
Trigger: CTTGGACCCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp CAGGCAGGCGTGGACTCGGGAGCCGAGGGTGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAG +
Preference number: 1 (lower is better)
Translates to: QAGVDSGAEGGRMAA*APVSFPAFPSLPLQ
Trigger: CTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAGTCCACGCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp GTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTaGGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCA +
Preference number: 1 (lower is better)
Translates to: VQTARASGACMAGQD*GSHRADKGDESHVA
Trigger: TGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 90 bp CTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCACATGTGGAACACCACATCCCACTGT +
Preference number: 1 (lower is better)
Translates to: LLGGDRPWLHAAKSR*WRGNRHMWNTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp AGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTC +
Preference number: 1 (lower is better)
Translates to: STSRTNCTSFGRMHG*PRLRVTQGRQGRRV
Trigger: GACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTaGCGTGGAAACAGGCACATGTGGAACACCACATCCCACTGTCCA +
Preference number: 1 (lower is better)
Translates to: LGGDRPWLHAAKSRC*RGNRHMWNTTSHCP
Trigger: TGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 90 bp CCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: PRVLPPETLSSHCSC*FLGQMEGGGTTRAE
Trigger: CTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR TCA 90 bp TTCCCGGTGGCTTCTCAGCACCTTGAGCCTCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAA +
Preference number: 1 (lower is better)
Translates to: FPVASQHLEPLMPRL*PQVQLQQVAASVIK
Trigger: TTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCCACCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGCACATGTaGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTC +
Preference number: 1 (lower is better)
Translates to: LHAAKSRCWRGNRHM*NTTSHCPRWSPPLL
Trigger: GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAACACCACATCCCACTGTCCAAGGTG +
Preference number: 1 (lower is better)
Translates to: RGQTLAPCCQVKVLA*KQAHVEHHIPLSKV
Trigger: CACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp TCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAAC +
Preference number: 1 (lower is better)
Translates to: SCLPRRCPHTAVADS*VKWKEEERRGQSAN
Trigger: GTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR TCA 90 bp AAACCAAAGTTAAATATCTCAACGAGAAGGGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCG +
Preference number: 1 (lower is better)
Translates to: KPKLNISTRRDTSRR*QLGTWLVPGPRDTA
Trigger: CGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCGTTGAGATATTTAACTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp CCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATaGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCG +
Preference number: 1 (lower is better)
Translates to: PRRCPHTAVADSWVK*KEEERRGQSANTKS
Trigger: CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR CCA 90 bp CAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGTCTGGTGAACCTGGTGAACTTGGTG +
Preference number: 1 (lower is better)
Translates to: QDGQVPALRTAQVWV*LLWRPCLVNLVNLV
Trigger: CACCAAGTTCACCAGGTTCACCAGACACGGCCTCCACAATAGCCACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 90 bp GTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTaGGTGTGGCTATTGTGGAGGCCGTGTCTGGTGAACCTGGTGAAC +
Preference number: 1 (lower is better)
Translates to: VFQDGQVPALRTAQV*VWLLWRPCLVNLVN
Trigger: GTTCACCAGGTTCACCAGACACGGCCTCCACAATAGCCACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 90 bp TGGGCTCAGCACTTCCAAAGGTCTCCCAGAAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCAGACCGCTGTTCTGATAACTGTGGC +
Preference number: 1 (lower is better)
Translates to: WAQHFQRSPRSSGLC*CFGSGPDRCSDNCG
Trigger: GCCACAGTTATCAGAACAGCGGTCTGGACCACTTCCAAAACAGCAACATAGACCAGAGCTTCTGGGAGACCTTTGGAAGTGCTGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR TCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGCGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR TCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 2 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: WPRPLSHPPASGPRAHPAGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 2 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR GCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR CCA 90 bp GGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 2 (lower is better)
Translates to: GRPPHRLDSKPPPRTEDSMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...GGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR CCA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR GCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR GCA 90 bp GGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GGGVRARPAVAARGLAGLHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...AAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR GCA 90 bp GGCCGAGCCCCACACCTCCCAGCTGTCCGAGCTCCTCCTCTCGGTGGAGGTGTCAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GRAPHLPAVRAPPLGGGVSALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...GACACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTGGGGCTCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHRAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: RARPAVAARGLAGLGGLSAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...GCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR TCA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 2 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR GCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCCTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 2 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CGAGAAGGGACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: REGTPHVADSSARGWSQAAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...GGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: KTPTLSSRGLASWALCAGDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGAGCTCGGACGCCTTCTaGCTCGCTTGGGATCCAAAC +
Preference number: 2 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGSSDAF*LAWDPN
Trigger: GTTTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCT...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR GCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRAVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR GCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 2 (lower is better)
Translates to: RARPAVAARGLAGLGGLSTSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...GCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 2 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 2 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACTCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: TWALTHSKERPQHRSQAHSALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 2 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATAGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: TPHVADSSARGWSQAPEIAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR TCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PRSTQPTRVQAALGRYHASHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PRSTQPTRVQAALGRYHALLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp AAGGTGGTGACGTCCCGCCATCCCTTACTACCGACTCCCTGGACCTTGGACGCCGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: KVVTSRHPLLPTPWTLDAGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...GGCGTCCAAGGTCCAGGGAGTCGGTAGTAAGGGATGGCGGGACGTCACCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 2 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCACCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 2 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQAPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGCTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 2 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCAAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 2 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CAA 90 bp CCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGC +
Preference number: 2 (lower is better)
Translates to: PSSPREIPRGRPRLS*EKDTQRPPRSALGG
Trigger: GCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: QLGERHSKTPTLSSRGLAWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 2 (lower is better)
Translates to: HSKTPTLSSRGLASWALCRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR GCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: AGRRAPHVQTARASGACMALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR GCA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCAETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CCA 90 bp GGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTCGACTCCCTGGACCTTaGACGCCAACTGAGAGACCC +
Preference number: 2 (lower is better)
Translates to: GGGVRARPAVAARGLAGLRLPGP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGAGTCG...AAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR CAA 90 bp TCGGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCAGCACTTCCAAAGGTCTCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: SVEVSAHVQLSLLGD*RVLVGSALPKVSQK
Trigger: CTTCTGGGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR TCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCCGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVEVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGACAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 2 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGTCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: PSPPSPPSLLLFLLVEAESSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...CTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR GCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQARPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: HSKTPTLSSRGLASWALCAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 2 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSARLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CAA 90 bp GTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCAAAGGTCTCCCAGAAGCTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: VSAHVQLSLLGDLRV*VGSALPKVSQKLWS
Trigger: AGACCAGAGCTTCTGGGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR TCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 2 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGEDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR TCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGAGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 2 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 2 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGAGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 2 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 2 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGCCCTTTGTGCTGGCTaGTTTCCCGGTGGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGALCAG*FPGGFS
Trigger: TGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 2 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERTSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR CCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 2 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGATACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCATACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQAYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACACTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 2 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVERAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGEVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 2 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAASHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR TCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 2 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 2 (lower is better)
Translates to: HSKTPTLSSRGLASWALCCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 2 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 2 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSATTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGEVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: REESTSRTNCTSFGRMHGSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: AGRRAPHVQTARASGACMLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGACCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCA +
Preference number: 2 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRPPART*RRERPS
Trigger: TGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGG...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 2 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAESSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAACTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 2 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSALGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GTGGGCCCTACCAGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: VGPTSSGCPSHHQWARPATCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...CGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 2 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSACCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACGGAAACAGGCACATGTaGAACACCACATCCCACTGT +
Preference number: 2 (lower is better)
Translates to: TWALTHSKERPQHRSQAHGNRHM*NTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCC...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: WPRPLSHPPASGPRAHPASHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: GRPPHRLDSKPPPRTEDSSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...GGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR TCA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQIDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 2 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR TCA 90 bp CTTTCCCTCCTTCACCTTCTCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 2 (lower is better)
Translates to: LSLLHLLLRRLEDVLVQAGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...AGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGAGGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR GCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 2 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERRPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR GCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 2 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATCTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: PASRDAVLTLQLLILGSNLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 2 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 2 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGEGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR TCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGAGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 2 (lower is better)
Translates to: AGRRAPHVQTARASGACMCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR TCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGAGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 2 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR GCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCTTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CTTTCCCTCCTTCACCTTCTCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LSLLHLLLRRLEDVLVQAPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...AGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGAGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR GCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGACAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRQTLAP*CQVKVL
Trigger: CAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTG...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 2 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 2 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR GCA 90 bp CTCCAGCCCGAGTACAGGGAGGACATGGCGTTGTTGAGGAAGTCATCTTCTTTCCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LQPEYREDMALLRKSSSFRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGATACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 2 (lower is better)
Translates to: PASRDAVLTLQLLILGSNPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: AGRRAPHVQTARASGACMETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CCA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 2 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQIGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR GCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 2 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: WSDGSVSASIISSISIFTGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR GCA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 2 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQITSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SVSASIISSISIFTTPVTAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR TCA 90 bp GACGTTCTCGTTCAGGCTGTGGCCCAGCTCGGACGCCTTCTGACTCGCTTGGGAAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: DVLVQAVAQLGRLLTRLGRTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...TCCCAAGCGAGTCAGAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: PASRDAVLTLQLLILGSNYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 2 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR TCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: AGRRAPHVQTARASGACMSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 2 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR CAA 90 bp AGCACTTCCAAAGGTCTCCCAGAAGCTCTGGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCTGTTCTGATAACTGTGGCCCTCCGA +
Preference number: 2 (lower is better)
Translates to: STSKGLPEALVYVAV*EVVQTAVLITVALR
Trigger: TCGGAGGGCCACAGTTATCAGAACAGCGGTCTGGACCACTTCCAAAACAGCAACATAGACCAGAGCTTCTGGGAGACCTTTGGAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 2 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR GCA 72 bp GTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCCGCCCTCCCCGCCGTC +
Preference number: 3 (lower is better)
Translates to: VPAIISGHGRRH*LLGALPALPAV
Trigger: GACGGCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR GCA 72 bp CATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: HQWARPAALPSW*PPRPPRRRCCC
Trigger: ACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVSLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 72 bp CGCTGGGGACGGGGGCGCAGTGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGC +
Preference number: 3 (lower is better)
Translates to: RWGRGRSGPYQF*LSQPSSVGTAG
Trigger: GCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCCCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CCA 72 bp AGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTaGGGACGGGGGCGCAGTGGGCCCTACCAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: RAECKHEVARGR*GRGRSGPYQFW
Trigger: CCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 3 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAAGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp CATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCTTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 3 (lower is better)
Translates to: HQWARPAALPSWCPPRPPFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CAA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 3 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR CAA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCTCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEASPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR TCA 72 bp CAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAGGCGTGGACTCGGGAG +
Preference number: 3 (lower is better)
Translates to: QGSHRGLRPTRV*QHRPRQAWTRE
Trigger: CTCCCGAGTCCACGCCTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 72 bp GCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCTCACACTGCAGTTGCT +
Preference number: 3 (lower is better)
Translates to: AQAAHTRVSLGS*LPRRCPHTAVA
Trigger: AGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR GCA 72 bp CCCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCACCCTGCGCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: PSCLATSAIAPS*IRAEGPPCAPF
Trigger: AAAAGGAGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 72 bp CCCACACCTCCCAGCTGTCCGAGCTCCTCCTCTCGGTaGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCG +
Preference number: 3 (lower is better)
Translates to: PTPPSCPSSSSR*RCPRTSSCRCS
Trigger: CGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp AGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAGGCGTGGACTCGCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 3 (lower is better)
Translates to: RVTTDAGLTAQAQAGVDSRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...CGAGTCCACGCCTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp GACGTTCTCGTTCAGGCTGTGGCCCAGCTCGGACGCCTTCTGACTCGCTTGGGAGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 3 (lower is better)
Translates to: DVLVQAVAQLGRLLTRLGGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...TCCCAAGCGAGTCAGAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CAA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGCGCCTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 3 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGRLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCG...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR TCA 72 bp GTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGGCTaGAGGGCCCAGGCTGCTCCAGGAGTGCTGCAGACG +
Preference number: 3 (lower is better)
Translates to: VAESLGWDEHRG*RAQAAPGVLQT
Trigger: CGTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAGCCCCTGTGCTCGTCCCACCCTAGGGACTCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 72 bp TCTCGGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: SRWRCPRTSSCR*SGTCGSWWAQH
Trigger: GTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 3 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR TCA 72 bp CACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGGCACCGGTGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: HTWQHIIQSSGR*GLACGGHRCAG
Trigger: CCCTGCACACCGGTGCCCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CAA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR TCA 72 bp TGCCCACAGGGAGGACCGGGCGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: CPQGGPGARRAR*NLGPILFCKWL
Trigger: CAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCGCCCGGTCCTCCCTGTGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR TCA 72 bp CCTTGGCTGCCGAGGCAAACCGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGTACAGGGAGGACATGG +
Preference number: 3 (lower is better)
Translates to: PWLPRQTGWLQW*SCSSPSTGRTW
Trigger: CCATGTCCTCCCTGTACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCCGGTTTGCCTCGGCAGCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR GCA 72 bp GGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGGGGGCGCTGGGGACGG +
Preference number: 3 (lower is better)
Translates to: GQMEGGGTTRAE*KHEVARGRWGR
Trigger: CCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR GCA 72 bp GCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTGGAACGCAGTCACAGG +
Preference number: 3 (lower is better)
Translates to: ARHVAGPRPQRY*VVNWPLERSHR
Trigger: CCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp CAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTTCTCAGCACCTTGAGC +
Preference number: 3 (lower is better)
Translates to: QLSGAGFLGPLC*LLSRWLLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp GACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTGCTGGCTGCTTTCCCG +
Preference number: 3 (lower is better)
Translates to: DTQRPPRSALGG*LPGPFVLAAFP
Trigger: CGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp GGCCCTACCAGTTCTGGTTGTCCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: GPTSSGCPSHHQ*ARPAALPSWCP
Trigger: AGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp CGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 3 (lower is better)
Translates to: RPAVAARGLAGLGGLSTSIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...GGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR GCA 72 bp TGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAGCACTTCCAAAGGTCT +
Preference number: 3 (lower is better)
Translates to: CPRTSSCRCSGT*GSWWAQHFQRS
Trigger: AGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR GCA 72 bp AGGCACCCTCCTGGGCGGGGACAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGCA +
Preference number: 3 (lower is better)
Translates to: RHPPGRGQTLAP*CQVKVLAWKQA
Trigger: TGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp GCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: AGPRPQRYCVVN*PLERSHRPLCC
Trigger: GCAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp GGGACACCTCACGTCGCTGACAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTG +
Preference number: 3 (lower is better)
Translates to: GTPHVADSSARG*SQAPEILRSEL
Trigger: CAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp CCCGCACCTGCAGAAGGGAAAGGCCATCACCCTCCGTaGACGGGGTCTCGGCCACCACATCCACCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: PAPAEGKGHHPP*TGSRPPHPPSE
Trigger: TTCAGAAGGTGGATGTGGTGGCCGAGACCCCGTCCACGGAGGGTGATGGCCTTTCCCTTCTGCAGGTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR-3UTR CAA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 3 (lower is better)
Translates to: QLGERHSKTPTLSSRGLARRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp GTGGCCCAGCTCGGACGCCTTCTGACTCGCTTGGGATCCAAACTTTGTAGCGCCTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: VAQLGRLLTRLGSKLCSASLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...GGCGCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCTGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR-3UTR CAA 90 bp AGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: SSGCPSHHQWARPAALPSLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...AGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR-3UTR CAA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGATCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRSPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR-3UTR CAA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 3 (lower is better)
Translates to: TWALTHSKERPQHRSQAHRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 72 bp CTGGTGAACCTGGTGAACTTGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAGGGTTACGACCGACGC +
Preference number: 3 (lower is better)
Translates to: LVNLVNLVVGRC*CRGATEGYDRR
Trigger: GCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCAAGTTCACCAGGTTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp AGGCAGGCGTGGACTCGGGAGCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: RQAWTREPRVVG*QRERQYHFQHF
Trigger: GAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAGTCCACGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp ACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCCCTCCACACCAGCTAC +
Preference number: 3 (lower is better)
Translates to: TAGGCFGDQIPP*QPRTPALHTSY
Trigger: GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp CTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGACCCCCACGCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LGRYHAAAHVSA*RKTLKDPHAQL
Trigger: GAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp AAGGTGGTGACGTCCCGCCATCCCTTACTACCGACTCCCTGGACCTTGGACGCCTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 3 (lower is better)
Translates to: KVVTSRHPLLPTPWTLDAFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...GGCGTCCAAGGTCCAGGGAGTCGGTAGTAAGGGATGGCGGGACGTCACCACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR TCA 72 bp GACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCAGCCAAGGACACCGGC +
Preference number: 3 (lower is better)
Translates to: DLRSNYSRWLLR*SNPSVAAKDTG
Trigger: GCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 72 bp GCTTCTCAGCACCTTGAGCCTCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAGCAGGTGGCTGCTTCG +
Preference number: 3 (lower is better)
Translates to: ASQHLEPLMPRL*PQVQLQQVAAS
Trigger: CGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 72 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: PPLTSGPTTAGG*FGDQIPPWQPR
Trigger: CCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 72 bp CGCTTGGGATCCAAACTTTGTAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGCTCCAGTGGTGAAGCT +
Preference number: 3 (lower is better)
Translates to: RLGSKLCSALLG*RGKPAGSSGEA
Trigger: AGCTTCACCACTGGAGCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAAGTTTGGATCCCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR CCA 72 bp CGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACACAGGGCAGACAAGGG +
Preference number: 3 (lower is better)
Translates to: RTNCTSFGRMHG*PRLRVTQGRQG
Trigger: CCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 72 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCA +
Preference number: 3 (lower is better)
Translates to: RHMWNTTSHCPR*SPPLLGALSPP
Trigger: TGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp CTTTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAGGAGAGGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: LYWNAVRSAPST*ALTHSKERPQH
Trigger: GTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 72 bp GCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGAGCACAGGGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: AEISVPSCSASG*VPRVGRAQGLK
Trigger: CTTCAGCCCCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR CCA 72 bp CTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGTCACACAGGGCAGACA +
Preference number: 3 (lower is better)
Translates to: LTYKLHELRAHA*LAKTEGHTGQT
Trigger: TGTCTGCCCTGTGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR-3UTR CAA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 3 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370275.8
3UTR TCA 72 bp TTAAATATCTCAACGAGAAGGGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: LNISTRRDTSRR*QLGTWLVPGPR
Trigger: TCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCGTTGAGATATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR GCA 72 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCACATGTGGAACACCACA +
Preference number: 3 (lower is better)
Translates to: GDRPWLHAAKSR*WRGNRHMWNTT
Trigger: TGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR TCA 72 bp CTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAAGGAGGAGGAACGACG +
Preference number: 3 (lower is better)
Translates to: LPPETLSSHCSC*FLGQMEGGGTT
Trigger: CGTCGTTCCTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR TCA 72 bp TGCTCCAGCCCGAGTACAGGGAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCTTCTGAGGCGGTGGCG +
Preference number: 3 (lower is better)
Translates to: CSSPSTGRTWRC*GSHLLSSEAVA
Trigger: CGCCACCGCCTCAGAAGAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
3UTR CCA 72 bp CCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PRRCPHTAVADS*VKWKEEERRGQ
Trigger: CTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
3UTR CCA 72 bp CAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGTCTGGTGAACCTGGTG +
Preference number: 3 (lower is better)
Translates to: QVPALRTAQVWV*LLWRPCLVNLV
Trigger: CACCAGGTTCACCAGACACGGCCTCCACAATAGCCACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp ACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAACACCACATCCCACTG +
Preference number: 3 (lower is better)
Translates to: TLAPCCQVKVLA*KQAHVEHHIPL
Trigger: CAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAACGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 3 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp GATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTaGGTGTGGCTATTGTGGAGGCCGTGTCTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: DGQVPALRTAQV*VWLLWRPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR-3UTR CAA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: EILRSELAAGTQSQASVLVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CCA 72 bp ACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: TLRSFFFQGVPG*SSSSTENSSGV
Trigger: CACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
3UTR GCA 72 bp CACTTCCAAAGGTCTCCCAGAAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCAGACCGCTGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: HFQRSPRSSGLC*CFGSGPDRCSD
Trigger: ATCAGAACAGCGGTCTGGACCACTTCCAAAACAGCAACATAGACCAGAGCTTCTGGGAGACCTTTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp ATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCCCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ISGHGRRHCLLGALPALPHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...GGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAAWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAAQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSPPSPPSLLLFLLVEAEALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...CTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PPAWPRPLSHPPASGPRAWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGGGGAGGAGCGAGGCCTaGTCTTCCCTCCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLGRSEA*SSLPVC
Trigger: ACAGACGGGGAGGGAAGAGCAGGCCTCGCTCCTCCC...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCTTCTTGGGCTGGCCATaGTGCTGGAGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPFLGWP*CWREGR
Trigger: CCGCCCCTCCCTCCAGCATCATGGCCAGCCCAAGAA...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp ATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCCGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: ISGHGRRHCLLGALPALPGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...GGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR TCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGCCCTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGPLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGG...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR TCA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGAAALQ*GCARSP
Trigger: GGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGC...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRAAALQ*GCARSP
Trigger: GGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGC...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GGGVRARPAVAARGLAGLAAALQ*GCARSP
Trigger: GGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGC...AAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp GGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRPPHRLDSKPPPRTEDSSALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...GGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLTSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: GRPPHRLDSKPPPRTEDSPSHHQ*ARPAAL
Trigger: CAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGG...GGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTCTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCALGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGAGGAAGGCACCCTCCTaGGCGGGGACAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGRKAPS*AGTDLG
Trigger: GCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCTTCCT...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CAA 72 bp TGGGGACGGGGGCGCAGTGGGCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WGRGRSGPYQFW*SQPSSVGTAGG
Trigger: GCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR TCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPAAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPADREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHSTLSL*CPASDL
Trigger: GAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCT...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPSTLSL*CPASDL
Trigger: GAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCT...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPARCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAASHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp GGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCGCGGTGCCAGGTGTGTaGGGGACATGGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GRPPHRLDSKPPPRTEDSAVPGV*GTWQRG
Trigger: TCCTCGCTGCCATGTCCCGCACACACCTGGCACCGC...GGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp TCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SAHVQLSLLGDLRVLVGSAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCACCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQAPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPAWPRPLSHPPASGPRAVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGTTCTTGGGCTGGCCATaGTGCTGGAGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGFLGWP*CWREGR
Trigger: CCGCCCCTCCCTCCAGCATCATGGCCAGCCCAAGAA...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGGCAGAGCAGTGGGACTaGTGGCAGCAAAGACGGCGC +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPAAEQWD*WQQRRR
Trigger: GCGCCGTCTTTGCTGCCATCAGTCCCACTGCTCTGC...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR TCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTACCACATCCACCTTCTaGAGGTGGCCCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGTTSTF*RWPRHL
Trigger: GAGGTGTCTGGGCCACCTTCAGAAGGTGGATGTGGT...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGACCTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLTLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGT...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR GCA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCTGGCCAGAGACTCGGTaGACCATGGACGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEAWPETR*TMDGSV
Trigger: GACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCA...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPAWPRPLSHPPASGPRATSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCATSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: APKTPHAQAAHTRVSLGSTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...GGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp ATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCCACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: ISGHGRRHCLLGALPALPTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...GGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSPPSPPSLLLFLLVEAESHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...CTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCAAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRAAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PPAWPRPLSHPPASGPRALLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCCTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACTTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VSAHVQLSLLGDLRVLVGVGPPH*NEDAPG
Trigger: ACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTAC...GCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPEAVTL*GWPETL
Trigger: AAGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000520485.5
CDS-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHCCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCASSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: PPAWPRPLSHPPASGPRARAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCCCTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ISGHGRRHCLLGALPALPLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...GGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHLGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGCCATCACCCTCCGTaGACGGGGTCTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLGHHPP*TGSRPP
Trigger: TGGTGGCCGAGACCCCGTCCACGGAGGGTGATGGCC...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAGGCGTGGACTCGGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVTTDAGLTAQAQAGVDSAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...CGAGTCCACGCCTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAHVQLSLLGDLRVLVGSDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR TCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPARPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEIRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCACTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPHLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGTG...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRSTQPTRVQAALGRYHARCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRATSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp GGCCGAGCCCCACACCTCCCAGCTGTCCGAGCTCCTCCTCTCGGTGGAGGTGTCACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRAPHLPAVRAPPLGGGVTSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...GACACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTGGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHTSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSPPSPPSLLLFLLVEAETTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...CTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGACGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCACTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRALKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCATACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQAYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: PRSTQPTRVQAALGRYHAYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCGCCACTCTGCAGCGGTaGCAGGTGTGTGCGGGACAT +
Preference number: 4 (lower is better)
Translates to: RARPAVAARGLAGLGGLSATLQR*QVCAGH
Trigger: ATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGC...GCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGCTCCACGCTGCTGACTaGACTTCCCATCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGLHAAD*TSHQKG
Trigger: TCCCTTTTGATGGGAAGTGCAGTCAGCAGCGTGGAG...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGTGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PRSTQPTRVQAALGRYHAWTAAS*AEVGSS
Trigger: ACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCA...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATAGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEIGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEAFSFRL*PSSDAF
Trigger: GAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGGCGGGGACAGACCTTaGCTCCATGCTGCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEAGGDRP*LHAAKS
Trigger: TGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCC...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR TCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGGTCACACTGACCCACTaGGGATTGAACGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPAVTLTH*GLNAPH
Trigger: GTGTGGCGCGTTCAATCCTCAGTGGGTCAGTGTGAC...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR TCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RPAVAARGLAGLGGLSTSDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...GGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERSALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPAVAARGLAGLGGLSTSRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...GGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp CGAGAAGGGACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: REGTPHVADSSARGWSQAPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...GGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WPRPLSHPPASGPRAHPARPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...CGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGTGGAGGTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTCTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GGGVRARPAVAARGLAGLLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...AAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCGCCCTTTGTGCTGGCTaGTTTCCCGGTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTALCAG*FPGGFS
Trigger: TGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGC...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARAAKSR*WRGNRH
Trigger: GTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGC...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGAACCTTCCTGGTTCTTaGGCTGGCCATGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLNLPGS*AGHDAG
Trigger: TCCAGCATCATGGCCAGCCCAAGAACCAGGAAGGTT...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTAACCTTCCTGGTTCTTaGGCTGGCCATGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGNLPGS*AGHDAG
Trigger: TCCAGCATCATGGCCAGCCCAAGAACCAGGAAGGTT...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp AGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAGGCGTGGACTCGAGACTCGGTGCACCATaGACGGCAGCGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVTTDAGLTAQAQAGVDSRLGAP*TAASWA
Trigger: AGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCT...CGAGTCCACGCCTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHCCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSGCPSHHQWARPAALPSAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...AGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEIPSHHQ*ARPAAL
Trigger: CAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGG...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCATGTGGCGGATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: HVAAHHPVLGEVRVGMWRMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...CCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGACCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGACTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGTCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWSALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHFSFRL*PSSDAF
Trigger: GAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGATCAAAAGGGACTCCCTaGGGCAGAGTGGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGSKGTP*GRVGRP
Trigger: GGGACGGCCCACTCTGCCCCAGGGAGTCCCTTTTGA...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGGGCCATCACCCTCCGTaGACGGGGTCTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKGHHPP*TGSRPP
Trigger: TGGTGGCCGAGACCCCGTCCACGGAGGGTGATGGCC...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCATCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAG +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQASAPST*ALTHSK
Trigger: CTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGA...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACCGACTCCCTGGACCTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHRLPGP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGAGTCG...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR TCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRGSVLG*GGVQFW
Trigger: CCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCC...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR TCA 90 bp CATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTGGTGCCCTCCCCGCCCTCCCTCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HQWARPAALPSWCPPRPPSSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR TCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCCGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 4 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRAAALQ*GCARSP
Trigger: GGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGC...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGACCTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGTLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGT...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSASALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GTGGCCCAGCTCGGACGCCTTCTGACTCGCTTGGGATCCAAACTTTGTAGCGCCGCACTGCCTTCTTGGTaGCCTCCCCGCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VAQLGRLLTRLGSKLCSAALPSW*PPRPPR
Trigger: GCGGGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGC...GGCGCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCTGGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR GCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTCGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGATGGCGGGCACCGGTGTaGAGGGCAGCCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRWRAPV*RAAPSW
Trigger: CCAGGATGGGGCTGCCCTGCACACCGGTGCCCGCCA...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPARLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHAAKSR*WRGNRH
Trigger: GTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGC...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGACCTTGGCTCCATGCTaGCAAGTCAAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGTLAPC*QVKVLA
Trigger: CGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGT...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GAHPGLPRVLPPETLSSHCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...GTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGRRAPHVQTARASGACMAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTGGCCCCCACACAGGCTaGACAGCAAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QLGERHSKTPTLSSRGLAGPHTG*TASRPH
Trigger: GTGGGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCC...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RARPAVAARGLAGLGGLSAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...GCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAGGCGTGGACTCGCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RVTTDAGLTAQAQAGVDSLGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...CGAGTCCACGCCTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTTCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLSHCPR*SPPLLG
Trigger: TCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGA...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTGGCCATCACCCTCCGTaGACGGGGTCTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSGCPSHHQWARPAALPSGHHPP*TGSRPP
Trigger: TGGTGGCCGAGACCCCGTCCACGGAGGGTGATGGCC...AGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR TCA 90 bp CTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LTARHVAGPRPQRYCVVNGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...GTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGCGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATAGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEIARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCATGTGGCGGGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HVAAHHPVLGEVRVGMWRARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...CCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDALMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCATGTGGCGGGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: HVAAHHPVLGEVRVGMWRGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...CCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAAGCTCGGACGCCTTCTaGCTCGCTTGGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGSSDAF*LAWDPN
Trigger: GTTTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCT...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR GCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCTGGCCAGAGACTCGGTaGACCATGGACGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAWPETR*TMDGSV
Trigger: GACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCA...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGTGGCCAGAGACTCGGTaGACCATGGACGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRWPETR*TMDGSV
Trigger: GACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCA...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHREAVTL*GWPETR
Trigger: CCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYEAVTL*GWPETR
Trigger: CCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGESALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCTCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTSFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR GCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRRPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSARTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRATSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCTACCAAGAGGGCTGGTaGCCACAGGGAGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGYQEGW*PQGGPG
Trigger: GCCCGGTCCTCCCTGTGGGCACCAGCCCTCTTGGTA...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTTTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYVGPPH*NEDAPG
Trigger: ACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTAC...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCCTCCACGCTGCTGACTaGACTTCCCATCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPSHTARRGPSTGPRPTLHAAD*TSHQKG
Trigger: TCCCTTTTGATGGGAAGTGCAGTCAGCAGCGTGGAG...GGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTTATGCTTTATTGGAATaGTGTCAGGTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGYALLE*CQVRAF
Trigger: GAAGGCGCGGACCTGACAGCATTCCAATAAAGCATA...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGGTGGGGTCCAGTTCTaGGCAGGTGATGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SAHVQLSLLGDLRVLVGSGGVQF*AGDDSR
Trigger: TCTGGAGTCATCACCTGCCCAGAACTGGACCCCACC...TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp GGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GGGTTRAECKHEVARGRWCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...CCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGCGGCACTGCCTTCTTaGTGCCCTCCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EILRSELAAGTQSQASVLAALPS*CPPRPP
Trigger: GGGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGACCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRPSHHQ*ARPAAL
Trigger: CAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGG...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGACTCGGGAGCCGAGGGTaGTCGGATGGCAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRLGSRG*SDGSVS
Trigger: GCTCACGCTGCCATCCGACCACCCTCGGCTCCCGAG...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVEVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRLGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALLGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAGGTGTGTGCGGGACATaGCAGCGAGGACAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGGVCGT*QRGQPR
Trigger: ACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACC...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGGCCATCACCCTCCGTaGACGGGGTCTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSGHHPP*TGSRPP
Trigger: TGGTGGCCGAGACCCCGTCCACGGAGGGTGATGGCC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCTCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAG +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERSAPST*ALTHSK
Trigger: CTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGA...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGCGACTCCCTGGACCTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALRLPGP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGAGTCG...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR TCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTCACACTGACCCACTaGGGATTGAACGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGVTLTH*GLNAPH
Trigger: GTGTGGCGCGTTCAATCCTCAGTGGGTCAGTGTGAC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR TCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCATCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRASSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCTCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTSSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR TCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPASPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGCAGAGCCCCGGCCTTaGGTCCAAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGEAEPRP*VQECPG
Trigger: CCCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGC...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAACGACCGACGCGGGTCTaGCAGCACAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQRPTRV*QHRPRQ
Trigger: CTGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCG...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GDRPWLHAAKSRCWRGNRVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...CCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGCAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGACCTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALTLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGT...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR GCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGACGTTGTTCTCATCCTaGACCCTGACTTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGTLFSS*TLTSLR
Trigger: TCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACGT...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCTGGCCAGAGACTCGGTaGACCATGGACGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAWPETR*TMDGSV
Trigger: GACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCA...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGEAVTL*GWPETR
Trigger: CCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSSALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCATCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQASFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAERCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALRPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCCGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGERLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGEVGPPH*NEDAPG
Trigger: ACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTAC...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GDRPWLHAAKSRCWRGNRVGPPH*NEDAPG
Trigger: ACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTAC...CCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRVGPPH*NEDAPG
Trigger: ACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTAC...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCACGCCCCGGCCACTCTaGAGCGGTGCCAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPTPRPL*SGARCV
Trigger: CACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGT...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGAAKSR*WRGNRH
Trigger: GTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGCCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKPPART*RRERPS
Trigger: TGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGG...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCTGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVWTAAS*AEVGSS
Trigger: ACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCA...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGFSFRL*PSSDAG
Trigger: GCCGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR CCA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGTCTCCCAGAAGCTCTaGTCTATGTTGCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPVSQKL*SMLLFW
Trigger: CCAAAACAGCAACATAGACCAGAGCTTCTGGGAGAC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: PGSKQPSGDTTRPPTSQLGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...AAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PRSTQPTRVQAALGRYHAYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: QAALGRYHAAAHVSAWRKDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...CTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGATCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GMLSGPRLPPGPSHTARRSALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...TCTCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCAGGAAGGCACCCTCCTaGGCGGGGACAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSRKAPS*AGTDLG
Trigger: GCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCTTCCT...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATAGGAAGGCACCCTCCTaGGCGGGGACAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADRKAPS*AGTDLG
Trigger: GCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCTTCCT...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGATCAAAAGGGACTCCCTaGGGCAGAGTGGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERSKGTP*GRVGRP
Trigger: GGGACGGCCCACTCTGCCCCAGGGAGTCCCTTTTGA...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAATCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAG +
Preference number: 4 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVESAPST*ALTHSK
Trigger: CTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGA...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGATCCGCGCCTTCCACCTaGGCCCTCACACACAGCAAG +
Preference number: 4 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERSAPST*ALTHSK
Trigger: CTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGA...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGTCACACTGACCCACTaGGGATTGAACGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCVTLTH*GLNAPH
Trigger: GTGTGGCGCGTTCAATCCTCAGTGGGTCAGTGTGAC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR TCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWGSVLG*GGVQFW
Trigger: CCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCC...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR TCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQGSVLG*GGVQFW
Trigger: CCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCC...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR TCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACAGACACCTCACGTCGCTaGCAGCTCGGCACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTDTSRR*QLGTWL
Trigger: CAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTC...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TGGTGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WWWDGADAGEPQRVTTDAVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...CGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCRWLLR*SNPSVA
Trigger: TGCCACGGAGGGATTTGATCACCGAAGCAGCCACCT...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSALMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSSTLSL*CPASDL
Trigger: GAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCT...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGGGCTTCTCAGCACCTTaGGCCTCTGATGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEGFSAP*ASDAPP
Trigger: AGGCGGGGCATCAGAGGCTCAAGGTGCTGAGAAGCC...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCACCACATCCACCTTCTaGAGGTGGCCCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERTTSTF*RWPRHL
Trigger: GAGGTGTCTGGGCCACCTTCAGAAGGTGGATGTGGT...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPEAVTL*GWPETR
Trigger: CCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTTCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRSFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPSSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGCGCTGCTCGGGGACTTaGGGGTCTTGGTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRRCSGT*GSWWAQ
Trigger: CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCG...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGACGTCCAGCTGTCGCTaGTCGGGGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGETSSCR*SGTCGS
Trigger: AGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGT...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCCTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTCTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QLGERHSKTPTLSSRGLALKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCCCGCAGAGCGCCTCATaGCAGGAAACAGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGPQSAS*QETGQN
Trigger: ATTTTGTCCTGTTTCCTGGCATGAGGCGCTCTGCGG...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERAAKSR*WRGNRH
Trigger: GTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGC...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCGGTGGGGTCCAGTTCTaGGCAGGTGATGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPAGGVQF*AGDDSR
Trigger: TCTGGAGTCATCACCTGCCCAGAACTGGACCCCACC...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTTGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGWTAAS*AEVGSS
Trigger: ACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCA...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAAGACTCGGTGCACCATaGACGGCAGCGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGRLGAP*TAASWA
Trigger: AGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCT...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp CTTCTGAGGCGGTGGCGTGTTCCCAAACCCCACGTAGCGATTCCCCTGGGCCCCACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLRRWRVPKPHVAIPLGPTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...GGGGCCCAGGGGAATCGCTACGTGGGGTTTGGGAACACGCCACCGCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYCCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AAGGTGGTGACGTCCCGCCATCCCTTACTACCGACTCCCTGGACCTTGGACGCCTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: KVVTSRHPLLPTPWTLDACCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...GGCGTCCAAGGTCCAGGGAGTCGGTAGTAAGGGATGGCGGGACGTCACCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp CGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: RPAVAARGLAGLGGLSTSGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...GGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACAGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGGGACGGGGGCGCAGTaGGCCCTACCAGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPGTGAQ*ALPVLV
Trigger: AACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAAGCTCGGCACGTGGCTaGTCCCAGGCCCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGSSARG*SQAPEI
Trigger: TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCT...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGEPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGERAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGRAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTGTGAGGGTTGGCATGTaGCGGGCACCGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSVRVGM*RAPVCR
Trigger: CCTGCACACCGGTGCCCGCCACATGCCAACCCTCAC...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCATGTGGCGGTGGCTGCTTTCCCGGTaGCTTCTCAGCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HVAAHHPVLGEVRVGMWRWLLSR*LLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCA...CCGCCACATGCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGATGGCTGCTTTCCCGGTaGCTTCTCAGCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGWLLSR*LLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCA...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGGACGGCGCTGGCACTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWDGAGT*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGTGCCAGCGCCGTC...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp AGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGCACTGCCTTCTTCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SSGCPSHHQWARPAALPSSHCPR*SPPLLG
Trigger: TCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGA...AGAAGGCAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAA +
Preference number: 4 (lower is better)
Translates to: PRSTQPTRVQAALGRYHAVKVLA*KQAHVE
Trigger: TTCCACATGTGCCTGTTTCCACGCCAGCACCTTGAC...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACCTGGGCCCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACTCCCGTATGCTTTATTaGAATGCTGTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: TWALTHSKERPQHRSQAHSRMLY*NAVRSA
Trigger: CGCGGACCTGACAGCATTCCAATAAAGCATACGGGA...GTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGGGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
3UTR CAA 72 bp CACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCAAAGGTCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HVQLSLLGDLRV*VGSALPKVSQK
Trigger: CTTCTGGGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
3UTR CAA 72 bp CCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGACCCCCACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PREIPRGRPRLS*EKDTQRPPRSA
Trigger: AGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCTTCTTGGGCTGGCCATaGTGCTGGAGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PTLRSFFFQGVPGWSSSSFLGWP*CWREGR
Trigger: CCGCCCCTCCCTCCAGCATCATGGCCAGCCCAAGAA...GCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCGGCTGGCTCCAGTGGTaGAGCTGCTCCAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: PTLRSFFFQGVPGWSSSSGWLQW*SCSSPS
Trigger: ACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCC...GCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCCCCTTGGACGCCAACTaGGAGACCCCACTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSPLDAN*ETPLET
Trigger: TGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGG...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR TCA 90 bp CCTCACACACAGCAAGGAGAGGCCCCAGCACCGGTCCCAGGCCCACCTGCCCGCTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: PHTQQGEAPAPVPGPPARSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...GCGGGCAGGTGGGCCTGGGACCGGTGCTGGGGCCTCTCCTTGCTGTGTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGSTLSL*CPASDL
Trigger: GAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCT...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: WSDGSVSASIISSISIFTAAALQ*GCARSP
Trigger: GGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGC...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCASSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAACGACGAGGGCAGAGTaGAAACACGAAGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRTTRAE*KHEVAR
Trigger: CCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGT...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGTCTCCCTAGGGTCCTaGCTCCCGAGACGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPVSLGS*LPRRCP
Trigger: AGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAAGTCACAGGCCTCTGTaGTGCAGCCCACCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTSHRPL*CSPPPS
Trigger: GCTGGGAGGTGGGCTGCAGCACAGAGGCCTGTGACT...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGCGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPATSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACACTGAAGGGCCCAGGCTaGTCCAGGAGTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTLKGPG*SRSAAD
Trigger: GTCTGCAGCACTCCTGGAGCAGCCTGGGCCCTTCAG...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACGCCCTTTGTGCTGGCTaGTTTCCCGGTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LTARHVAGPRPQRYCVVNALCAG*FPGGFS
Trigger: TGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGC...GTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGTTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GDRPWLHAAKSRCWRGNRFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...CCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGCGAGGACAGCCTCGTaGACAGACCTCAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSARTAS*TDLKSS
Trigger: GGAGCTCTTGAGGTCTGTGCACGAGGCTGTCCTCGC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCCCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVPPART*RRERPS
Trigger: TGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGG...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCCCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSPPART*RRERPS
Trigger: TGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGG...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAAGACTCGGTGCACCATaGACGGCAGCGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTRLGAP*TAASWA
Trigger: AGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCT...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAATTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQFSFRL*PSSDAG
Trigger: GCCGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519604.5
CDS-3UTR CCA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTTACTACCGACTCCCTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCYYRLP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGGAGTCGGTAGTA...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGATACTACCGACTCCCTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGYYRLP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGGAGTCGGTAGTA...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519604.5
CDS-3UTR CCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCAAAGGTCTCCTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SLLGDLRVLVGSALPKVSCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...GGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACCCAGCCATCATCAGTaGGCACGGCCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPAPSHHQ*ARPAAL
Trigger: CAGTGCCGCCGGCCGTGCCCACTGATGATGGCTGGG...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCCGGCCCCTCCTGCCTaGCCACGTCCGCTATCGCAC +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSPAPPA*PRPLSH
Trigger: GTGCGATAGCGGACGTGGCCAGGCAGGAGGGGCCGG...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGRAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGACTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAATGGCTGCTTTCCCGGTaGCTTCTCAGCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVEWLLSR*LLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCA...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTSALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSFSFRL*PSSDAF
Trigger: GAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCAGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQAAHVSA*RKTLKD
Trigger: GTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGC...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGATCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGSHCPR*SPPLLG
Trigger: TCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGA...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCGGCGGGGACAGACCTTaGCTCCATGCTGCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGGGDRP*LHAAKS
Trigger: TGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCC...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGGCGGGGACAGACCTTaGCTCCATGCTGCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGEGGDRP*LHAAKS
Trigger: TGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCC...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTCAAAAGGGACTCCCTaGGGCAGAGTGGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSSKGTP*GRVGRP
Trigger: GGGACGGCCCACTCTGCCCCAGGGAGTCCCTTTTGA...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCGTCACACTCTGCGGCTaGCCAGAGACTCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERVTLCG*PETLIP
Trigger: AGGGATAAGAGTCTCTGGCCAGCCGCAGAGTGTGAC...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519273.6
CDS-3UTR TCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGTTCTTGGGCTGGCCATaGTGCTGGAGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVFLGWP*CWREGR
Trigger: CCGCCCCTCCCTCCAGCATCATGGCCAGCCCAAGAA...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSGSVLG*GGVQFW
Trigger: CCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR TCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATATCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEISSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTRTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR TCA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: QLGERHSKTPTLSSRGLAGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVEVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGAGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTGTCAAGTTCCAGCACTaGGAACAGCTCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGVKFQH*EQLRCG
Trigger: CCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGAC...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGGACCGGGAAGTGGGGTaGCCAGGGAGCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVDREVG*PGSMAK
Trigger: CTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTC...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAAGCACCTTGAGCCTCTaGTGCCCCGCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQSTLSL*CPASDL
Trigger: GAGGTCAGAGGCGGGGCATCAGAGGCTCAAGGTGCT...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAACCACATCCACCTTCTaGAGGTGGCCCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGTTSTF*RWPRHL
Trigger: GAGGTGTCTGGGCCACCTTCAGAAGGTGGATGTGGT...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRASSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR GCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACATTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTCAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGQTLAP*CQVKVL
Trigger: CAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTG...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATAAACCTTCCTGGTTCTTaGGCTGGCCATGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: TPHVADSSARGWSQAPEINLPGS*AGHDAG
Trigger: TCCAGCATCATGGCCAGCCCAAGAACCAGGAAGGTT...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEATERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp GGGGAGCCACAGAGGGTTACGACCGACGCGGGTCTGACAGCACAGGCCCAGGCATCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: GEPQRVTTDAGLTAQAQASMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...TGCCTGGGCCTGTGCTGTCAGACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGTGCTGTTCCTGTTGGTaGAGGCCGAGCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRCCSCW*RPSPTP
Trigger: AGGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCA...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGATGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCAAGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: SSCRCSGTCGSWWAQHFQGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CCA 90 bp GGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGCATGGCCAAGGGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GVLQTATGKWGDQGAWPRAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...CCTTGGCCATGCTCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: EILRSELAAGTQSQASVLGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAGGGCGCATGCATGGCTaGCCAAGACTGAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTGRMHG*PRLRVT
Trigger: TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCC...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGTGGCTGCTTTCCCGGTaGCTTCTCAGCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWWLLSR*LLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCA...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTCTGGGCCCTTTGTGCTaGCTGCTTTCCCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSLGPLC*LLSRWL
Trigger: AAGCCACCGGGAAAGCAGCCAGCACAAAGGGCCCAG...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCTCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQISALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCCTCCTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGGAAACAGGCACATGTaGAACACCACATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PSWAGTDLGSMLPSQGAGGNRHM*NTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCC...GCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAGGCGGGGACAGACCTTaGCTCCATGCTGCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTGGDRP*LHAAKS
Trigger: TGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCC...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATAGGAAGGCACCCTCCTaGGCGGGGACAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNRKAPS*AGTDLG
Trigger: GCCAAGGTCTGTCCCCGCCCAGGAGGGTGCCTTCCT...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACACGACTCCCTGGACCTTaGACGCCAACTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTRLPGP*TPTERP
Trigger: GGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGAGTCG...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370283.9
ENST00000519273.6
CDS-3UTR TCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAGTCACACTGACCCACTaGGGATTGAACGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTVTLTH*GLNAPH
Trigger: GTGTGGCGCGTTCAATCCTCAGTGGGTCAGTGTGAC...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR TCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCTCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSASSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGTGGTGGGACGGTGCTaGTGCAGGGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSVVGRC*CRGATE
Trigger: CTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCAC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCAGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPAARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLRWLLR*SNPSVA
Trigger: TGCCACGGAGGGATTTGATCACCGAAGCAGCCACCT...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: EILRSELAAGTQSQASVLRWLLR*SNPSVA
Trigger: TGCCACGGAGGGATTTGATCACCGAAGCAGCCACCT...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAESFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGCTATCGCACCCTCCTaGATCAGGGCCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSAIAPS*IRAEGP
Trigger: TGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATCTGCTCCAGGAGTGCTaGAGACGGCGACCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNLLQEC*RRRPGS
Trigger: ACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAG...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGTTCCTGGGCCCTTTGTaGTGGCTGCTTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWFLGPL*WLLSRW
Trigger: CCACCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAA...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGAAACAGGACAAAATaGACGCCCCAAATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGEGNRTK*TPQMAR
Trigger: GCGGGCCATTTGGGGCGTGCATTTTGTCCTGTTTCC...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCACCTTGGCTCCATGCTaGCAAGTCAAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLTLAPC*QVKVLA
Trigger: CGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGT...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATCAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADQTLAP*CQVKVL
Trigger: CAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTG...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGGTGGGGTCCAGTTCTaGGCAGGTGATGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPGGVQF*AGDDSR
Trigger: TCTGGAGTCATCACCTGCCCAGAACTGGACCCCACC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCAAGACTCGGTGCACCATaGACGGCAGCGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPARLGAP*TAASWA
Trigger: AGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCT...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: GDRPWLHAAKSRCWRGNRFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...CCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGATTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTGGGACTTGCGGGTCTTaGTGGGCTCAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSGTCGS*WAQHFQ
Trigger: TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCC...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTGGACCTTGGACGCCAACTGAGAGACCCCACTGGAGACATCATCAAAAATATGCCCAGGGGAGTGTaGGACGGGACGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: SLDLGRQLRDPTGDIIKNMPRGV*DGTAPT
Trigger: TGTGGGGGCCGTCCCGTCCCACACTCCCCTGGGCAT...ATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCAGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: AGRRAPHVQTARASGACMWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...CATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACAGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCAAGGGCAGCCCCATCCTaGGGCTGGAGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPARAAPS*GWSFPR
Trigger: TCTAGGGAAGCTCCAGCCCCAGGATGGGGCTGCCCT...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGTCAGCTCTCGGGGGCTaGCTTCCTGGGCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSSALGG*LPGPFV
Trigger: CACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGA...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCTTACTACCGACTCCCTaGACAGACACAGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLLLPTP*TDTDAP
Trigger: CGGGGCGTCTGTGTCTGTCCAGGGAGTCGGTAGTAA...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CCA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTTCCCGTATGCTTTATTaGAATGCTGTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: HSKTPTLSSRGLASWALCSRMLY*NAVRSA
Trigger: CGCGGACCTGACAGCATTCCAATAAAGCATACGGGA...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TTCTTTCTTCTGAGGCGGTGGCGTGTTCCCAAACCCCACGTAGCGATTCCCCTGGTCACACTGACCCACTaGGGATTGAACGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: FFLLRRWRVPKPHVAIPLVTLTH*GLNAPH
Trigger: GTGTGGCGCGTTCAATCCTCAGTGGGTCAGTGTGAC...CAGGGGAATCGCTACGTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR TCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCTCATCTTCTTTCTTCTaGGGCGGTGGCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSSSSFF*GGGVFP
Trigger: TGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGA...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATTCTCCTGCGCAGGCTTaGGGACGTTCTCGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNSPAQA*GRSRSG
Trigger: GCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGA...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR TCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAACCACATCCACCTTCTaGAGGTGGCCCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQTTSTF*RWPRHL
Trigger: GAGGTGTCTGGGCCACCTTCAGAAGGTGGATGTGGT...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCTCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLSFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCCTTCACCTTCTCCTaGGCAGGCTTGAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTSFTFS*AGLRTF
Trigger: GAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGA...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HVADSSARGWSQAPEILRSSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...ACGCAGTATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTCACGGCCGGCGGCACTaGCTTCTTGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTHGRRH*LLGALP
Trigger: GGGGAGGGCACCAAGAAGGCAGTGCCGCCGGCCGTG...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQRPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGCCGAGGGCCCACCCTaGGCTCCTTTTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSAEGPP*APFSSR
Trigger: CCTGGAAGAAAAAGGAGCGCAGGGTGGGCCCTCGGC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGAGCCCTTTGTGCTGGCTaGTTTCCCGGTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGALCAG*FPGGFS
Trigger: TGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGC...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTCTCCACGCTGCTGACTaGACTTCCCATCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QLGERHSKTPTLSSRGLALHAAD*TSHQKG
Trigger: TCCCTTTTGATGGGAAGTGCAGTCAGCAGCGTGGAG...AGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGCCACCTGCCCGCACCTaGAGAAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVPPART*RRERPS
Trigger: TGATGGCCTTTCCCTTCTGCAGGTGCGGGCAGGTGG...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGAACCTTCCTGGTTCTTaGGCTGGCCATGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQNLPGS*AGHDAG
Trigger: TCCAGCATCATGGCCAGCCCAAGAACCAGGAAGGTT...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGGTGGGGTCCAGTTCTaGGCAGGTGATGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWGGVQF*AGDDSR
Trigger: TCTGGAGTCATCACCTGCCCAGAACTGGACCCCACC...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCTGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: WSDGSVSASIISSISIFTWTAAS*AEVGSS
Trigger: ACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCA...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTTTCTTCTGAGGCGGTaGCGTGTTCCCAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSFLLRR*RVPKPH
Trigger: GTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAA...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: KTPTLSSRGLASWALCAGTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGATCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGSMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGGGCCCTACCAGTTCTaGTTGTCCCAGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: EILRSELAAGTQSQASVLGPYQF*LSQPSS
Trigger: TGATGATGGCTGGGACAACCAGAACTGGTAGGGCCC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTTACTGCGTAGTGAACTaGCCGCTGGAACGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGYCVVN*PLERSH
Trigger: GTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTA...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EILRSELAAGTQSQASVLETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCTGGCTGCTTTCCCGGTaGCTTCTCAGCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PTLRSFFFQGVPGWSSSSWLLSR*LLSTLS
Trigger: GCTCAAGGTGCTGAGAAGCCACCGGGAAAGCAGCCA...GCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGAHVSA*RKTLKD
Trigger: GTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGC...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGTCCCACTGTCCAAGGTaGAGTCCACCCCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVSHCPR*SPPLLG
Trigger: TCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGA...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAA +
Preference number: 4 (lower is better)
Translates to: REESTSRTNCTSFGRMHGVKVLA*KQAHVE
Trigger: TTCCACATGTGCCTGTTTCCACGCCAGCACCTTGAC...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAA +
Preference number: 4 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGVKVLA*KQAHVE
Trigger: TTCCACATGTGCCTGTTTCCACGCCAGCACCTTGAC...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCACAGTCCTCGGGGAGGTaGGGGTTGGCATGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSQSSGR*GLACGG
Trigger: CCCGCCACATGCCAACCCTCACCTCCCCGAGGACTG...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGTGTTCTGCAAGTGGCTaGGTCCCTAGGGTGGGACGA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVCSASG*VPRVGR
Trigger: TCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACA...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR GCA 90 bp GCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGCTGTTGTACTTCTCCTaGAAGGACCAGCAAGGATCG +
Preference number: 4 (lower is better)
Translates to: ADKGDESHVAAHHPVLGELLYFS*KDQQGS
Trigger: CGATCCTTGCTGGTCCTTGCAGGAGAAGTACAACAG...CTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGAGAGGGCCGCGGCTCTaGTGTTGTACTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVRGPRL*CCTSPA
Trigger: TGCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCT...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTAGCGCCCTCCTTGGCTaGCGAGGCAAACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTSALLG*RGKPAG
Trigger: GCCAGCCGGTTTGCCTCGGCAGCCAAGGAGGGCGCT...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCAAGGCCCCAGAGATACTaGGTAGTGAACTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPARPQRY*VVNWPL
Trigger: CAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCT...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACCGCACAGGCATCCCCTaGTCAGCTCCTGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHRTGIP*SAPEPG
Trigger: GCCGGGTTCAGGAGCTGAGCAGGGGATGCCTGTGCG...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATACCTTGGCTCCATGCTaGCAAGTCAAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNTLAPC*QVKVLA
Trigger: CGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGT...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTAGGTTGTTCTCATCCTaGACCCTGACTTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGRLFSS*TLTSLR
Trigger: TCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACCT...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519604.5
CDS-3UTR GCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSEAVTL*GWPETL
Trigger: AAGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000520485.5
CDS-3UTR CCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGTCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRSMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGACTTGCGGGTCTTGGTaGGCTCAGCACTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWTCGSW*AQHFQR
Trigger: CCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGT...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATTGTTGCTGTTCCTGTTaGTGGAGGCCGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNCCCSC*WRPSPT
Trigger: TGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACA...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp GACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTTGGCGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DESHVAAHHPVLGEVRVGAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...GCCAACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCCCGAGGGTGGTCGGATaGCAGCGTGAGCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: WSDGSVSASIISSISIFTPRVVG*QRERQY
Trigger: ATACTGGCGCTCACGCTGCCATCCGACCACCCTCGG...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACACAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSFSFRL*PSSDAF
Trigger: GAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAA...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR CCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEAHVSA*RKTLKD
Trigger: GTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGC...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCGCCCACGTCTCAGCTTaGAGAAAGACACTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PRLRVTQGRQGRRVTRGSAHVSA*RKTLKD
Trigger: GTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGC...GCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGAAACAGGCACATGTaGAACACCACATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGGNRHM*NTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCC...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACAGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAA +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTVKVLA*KQAHVE
Trigger: TTCCACATGTGCCTGTTTCCACGCCAGCACCTTGAC...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTTTCTTGGGCTGGCCATaGTGCTGGAGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTFLGWP*CWREGR
Trigger: CCGCCCCTCCCTCCAGCATCATGGCCAGCCCAAGAA...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRRTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSARTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGGTCGGATGGCAGCGTaGGCGCCAGTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSGRMAA*APVSFP
Trigger: TGGAAATGATACTGGCGCTCACGCTGCCATCCGACC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAACGTTGTTCTCATCCTaGACCCTGACTTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGTLFSS*TLTSLR
Trigger: TCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACGT...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR GCA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACCCCCGCCGTCGCTGTTaGTGTTCCTGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHPRRRC*CSCWWR
Trigger: CCTCCACCAACAGGAACAGCAACAGCGACGGCGGGG...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTAGGCTGCTCCAGGAGTaGTGCAGACGGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTRLLQE*CRRRPG
Trigger: TCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCT...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGGCACATGTGGAACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCACTACAGCAGGTGGCTaGTTCGGTGATCAAATCCCT +
Preference number: 4 (lower is better)
Translates to: RHMWNTTSHCPRWSPPLLTTAGG*FGDQIP
Trigger: AGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGT...GAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGAAACCTTCCTGGTTCTTaGGCTGGCCATGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGNLPGS*AGHDAG
Trigger: TCCAGCATCATGGCCAGCCCAAGAACCAGGAAGGTT...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGACTGAGAGACCCCACTaGAGACATCATCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRTERPH*RHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGT...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAGTCTCCCAGAAGCTCTaGTCTATGTTGCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGVSQKL*SMLLFW
Trigger: CCAAAACAGCAACATAGACCAGAGCTTCTGGGAGAC...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGGTCTCCCAGAAGCTCTaGTCTATGTTGCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEVSQKL*SMLLFW
Trigger: CCAAAACAGCAACATAGACCAGAGCTTCTGGGAGAC...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAGATCAAATCCCTCCGTaGCAGCCAAGGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRDQIPP*QPRTPA
Trigger: GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATC...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGGAAACAGGCACATGTaGAACACCACATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPGNRHM*NTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGTCCCGTATGCTTTATTaGAATGCTGTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRSRMLY*NAVRSA
Trigger: CGCGGACCTGACAGCATTCCAATAAAGCATACGGGA...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCCCGTATGCTTTATTaGAATGCTGTCAGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTSRMLY*NAVRSA
Trigger: CGCGGACCTGACAGCATTCCAATAAAGCATACGGGA...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGGTCACACTCTGCGGCTaGCCAGAGACTCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: WVKWKEEERRGQSANTKSVTLCG*PETLIP
Trigger: AGGGATAAGAGTCTCTGGCCAGCCGCAGAGTGTGAC...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000520485.5
CDS-3UTR TCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGERTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTGCCAGGAGGGCTCGCTaGAATCTCGGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTARRAR*NLGPIL
Trigger: CAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGC...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRRWLLR*SNPSVA
Trigger: TGCCACGGAGGGATTTGATCACCGAAGCAGCCACCT...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp GGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAACAGGAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GDRPWLHAAKSRCWRGNRSSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...CCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTACCTCACGTACAAACTaGACGAGCTTCGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSTSRTN*TSFGRM
Trigger: CATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGT...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAGCCCTTTGTGCTGGCTaGTTTCCCGGTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRALCAG*FPGGFS
Trigger: TGAGAAGCCACCGGGAAAGCAGCCAGCACAAAGGGC...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSQTLAP*CQVKVL
Trigger: CAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTG...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSSMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CCA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACATCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTSMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGCAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTTCAAAAGGGACTCCCTaGGGCAGAGTGGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTSKGTP*GRVGRP
Trigger: GGGACGGCCCACTCTGCCCCAGGGAGTCCCTTTTGA...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTCTGATGCCCCGCCTCTaGCCTCAGGTCCAACTACAG +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTLMPRL*PQVQLQ
Trigger: CTGTAGTTGGACCTGAGGTCAGAGGCGGGGCATCAG...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACAGCTCGGACGCCTTCTaGCTCGCTTGGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHSSDAF*LAWDPN
Trigger: GTTTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCT...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR GCA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGACGTTGTTCTCATCCTaGACCCTGACTTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGETLFSS*TLTSLR
Trigger: TCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACGT...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR GCA 90 bp TTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAAGGAACGTTGTTCTCATCCTaGACCCTGACTTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: LECCQVRAFHLGPHTQQGTLFSS*TLTSLR
Trigger: TCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACGT...TCCTTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR GCA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACACCTTGGCTCCATGCTaGCAAGTCAAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHTLAPC*QVKVLA
Trigger: CGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGT...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp GCTGCTCCAGCCCGAGTACAGGGAGGACATGGCGTTGTTGAGGAAGTCATCTTCGTCTCCCAGAAGCTCTaGTCTATGTTGCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AAPARVQGGHGVVEEVIFVSQKL*SMLLFW
Trigger: CCAAAACAGCAACATAGACCAGAGCTTCTGGGAGAC...GAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp CTTTCCCTCCTTCACCTTCTCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTGCAGTTGCTGATTCTTaGGTCAAATGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSLLHLLLRRLEDVLVQAAVADS*VKWKEE
Trigger: CTCCTCCTTCCATTTGACCCAAGAATCAGCAACTGC...AGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGGAGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCACTTCGGGCGCATGCATaGCTGGCCAAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSLRAHA*LAKTEG
Trigger: ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAG...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp TTCTTTCTTCTGAGGCGGTGGCGTGTTCCCAAACCCCACGTAGCGATTCCCCTGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: FFLLRRWRVPKPHVAIPLSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CAGGGGAATCGCTACGTGGGGTTTGGGAACACGCCACCGCCTCAGAAGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR TCA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAAGGTGGCTGCTTCGGTaGTCAAATCCCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSRWLLR*SNPSVA
Trigger: TGCCACGGAGGGATTTGATCACCGAAGCAGCCACCT...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCAGCTCTGGTCTATGTTaGTGTTTTGGAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PTLRSFFFQGVPGWSSSSSSGLC*CFGSGP
Trigger: TGGACCACTTCCAAAACAGCAACATAGACCAGAGCT...GCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATTATGCTTTATTGGAATaGTGTCAGGTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PASRDAVLTLQLLILGSNYALLE*CQVRAF
Trigger: GAAGGCGCGGACCTGACAGCATTCCAATAAAGCATA...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTGGGTGTGGCTATTGTaGAGGCCGTGTCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHWVWLL*RPCLVN
Trigger: GTTCACCAGACACGGCCTCCACAATAGCCACACCCA...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGCTCAGGTGTGGGTGTaGCTATTGTGGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSAQVWV*LLWRPC
Trigger: ACACGGCCTCCACAATAGCCACACCCACACCTGAGC...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGACAGGGTGTTCCAGGATaGTCAAGTTCCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRQGVPG*SSSSTE
Trigger: CTCAGTGCTGGAACTTGACCATCCTGGAACACCCTG...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR TCA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGTCACACTGCAGTTGCTaGTTCTTGGGTCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVSHCSC*FLGQME
Trigger: TTCCATTTGACCCAAGAATCAGCAACTGCAGTGTGA...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTCAGACCTTGGCTCCATaGTGCCAAGTCAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTQTLAP*CQVKVL
Trigger: CAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTG...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp CTCCAGCCCGAGTACAGGGAGGACATGGCGTTGTTGAGGAAGTCATCTTCTTTCTCTATGTTGCTGTTTTaGAAGTGGTCCAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: LQPEYREDMALLRKSSSFSMLLF*KWSRPL
Trigger: CAGCGGTCTGGACCACTTCCAAAACAGCAACATAGA...GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTGAGACGAGTCACACGTaGCAGCACATCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTETSHT*QHIIQS
Trigger: GGACTGGATGATGTGCTGCCACGTGTGACTCGTCTC...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp TGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGATATGCTTTATTGGAATaGTGTCAGGTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CAPFSSRVFQDGQVPALRYALLE*CQVRAF
Trigger: GAAGGCGCGGACCTGACAGCATTCCAATAAAGCATA...TCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CCA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCGTCTCCCAGAAGCTCTaGTCTATGTTGCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: WSDGSVSASIISSISIFTVSQKL*SMLLFW
Trigger: CCAAAACAGCAACATAGACCAGAGCTTCTGGGAGAC...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR GCA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTTATGCTTTATTGGAATaGTGTCAGGTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SVSASIISSISIFTTPVTYALLE*CQVRAF
Trigger: GAAGGCGCGGACCTGACAGCATTCCAATAAAGCATA...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR TCA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSRTWRC*GSHLLS
Trigger: AGAAAGAAGATGACTTCCTCAACAACGCCATGTCCT...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp CCGCCGGGGTCAGGCCAGGGCCGAGGTAGGGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCCACCAGCCGCCACCAGCTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PPGSGQGRGRAAALQ*GCARSPTSRHQLPA
Trigger: AGCCGGAAGCTGGTGGCGGCTGGTGGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTACCTCGGCCCTGGCCTGACCCCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000519273.6
ENST00000519604.5
ENST00000522959.5
ENST00000523114.5
ENST00000547204.5
CDS GCA 90 bp CAGGGCCGCCGGGGTCAGGCCAGGGCCGAGGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGTCGCCCACCAGCCGCCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QGRRGQARAEVGPPH*NEDAPGRPPAATSF
Trigger: GAAGCTGGTGGCGGCTGGTGGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTACCTCGGCCCTGGCCTGACCCCGGCGGCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000522959.5
ENST00000523114.5
ENST00000523460.5
ENST00000547204.5
ENST00000549047.5
CDS CCA 90 bp CCACCATGCGGCCCTGCCGGGCCGGGCTGGTGGGAACAGGCCCTGTaGAGCCTGTGCCTGAGGCCAACGCCGGCTGCAGCCACCCCATGC +
Preference number: 5 (lower is better)
Translates to: PPCGPAGPGWWEQAL*SLCLRPTPAAATPC
Trigger: GCATGGGGTGGCTGCAGCCGGCGTTGGCCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 90 bp GTCCTCCCTCACGCGCCACCATGCGGCCCTGCCGGGCCGGGCTGGTaGGAACAGGCCCTGTGGAGCCTGTGCCTGAGGCCAACGCCGGCT +
Preference number: 5 (lower is better)
Translates to: VLPHAPPCGPAGPGW*EQALWSLCLRPTPA
Trigger: AGCCGGCGTTGGCCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGGGAGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 90 bp AGGGTCCTCCCTCACGCGCCACCATGCGGCCCTGCCGGGCCGGGCTaGTGGGAACAGGCCCTGTGGAGCCTGTGCCTGAGGCCAACGCCG +
Preference number: 5 (lower is better)
Translates to: RVLPHAPPCGPAGPG*WEQALWSLCLRPTP
Trigger: CGGCGTTGGCCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGGGAGGACCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS GCA 90 bp AAGGTCCCCCTCCAGGGTCCTCCCTCACGCGCCACCATGCGGCCCTaGCGGGCCGGGCTGGTGGGAACAGGCCCTGTGGAGCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: KVPLQGPPSRATMRP*RAGLVGTGPVEPVP
Trigger: AGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGGGAGGACCCTGGAGGGGGACCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS GCA 90 bp CTTGCAGGAAGGTCCCCCTCCAGGGTCCTCCCTCACGCGCCACCATaGGGCCCTGCCGGGCCGGGCTGGTGGGAACAGGCCCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LAGRSPSRVLPHAPP*GPAGPGWWEQALWS
Trigger: GCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGGGAGGACCCTGGAGGGGGACCTTCCTGCAAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS-3UTR CAA 90 bp CAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: QAAPTHRRLPTRRRRTPGGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...CCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS TCA 90 bp GCTCTCCTCCCGTCTCAGAGGACAGCGGCCACTGCCAAGCTGGGCTaGGGGCTGCACGGGGCACACCCTGCTCTCACGCCCAGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: ALLPSQRTAATAKLG*GLHGAHPALTPRAV
Trigger: CACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCAGCCCTCAGCCCAGCTTGGCAGTGGCCGCTGTCCTCTGAGACGGGAGGAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS GCA 90 bp CGTTCAAGGGAGCGCAGGTGGCCAGGAAACCCTGCTCAGCAGCTCTaGGCCCAGTGCCCCCGCCCTCCCTCCAGCACCTCCCCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RSRERRWPGNPAQQL*AQCPRPPSSTSPAA
Trigger: TGCTGCCGGGGAGGTGCTGGAGGGAGGGCGGGGGCACTGGGCGCAGAGCTGCTGAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CCA 90 bp TCCTGCTCGCGCCCCGGGAGGCGACGTGCGTGGGCAGGGACCCTCTaGACTCCCGTAACCGGTGGGAGATTCCAGATCCGGGGTGCGGGT +
Preference number: 5 (lower is better)
Translates to: SCSRPGRRRAWAGTL*TPVTGGRFQIRGAG
Trigger: ACCCGCACCCCGGATCTGGAATCTCCCACCGGTTACGGGAGTCCAGAGGGTCCCTGCCCACGCACGTCGCCTCCCGGGGCGCGAGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522403.6
CDS-3UTR CAA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: DSKPPPRTEDSPRAGGAHRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...GTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS CCA 90 bp GCACCAACCACAGCGGCCCTTCTGGCTGAGCGGCCACCGCCAGCGTaGGCCATCTGCCAAGCCGGGCAGTCCTGCTCCCAACAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: APTTAALLAERPPPA*AICQAGQSCSQQGG
Trigger: GCCACCTTGTTGGGAGCAGGACTGCCCGGCTTGGCAGATGGCCCACGCTGGCGGTGGCCGCTCAGCCAGAAGGGCCGCTGTGGTTGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS-3UTR CAA 90 bp CGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: RAGGAHPGLPRVLPPETLIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...CAGCGTCTCGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS GCA 90 bp CCGACTCCCTGGACAGACACAGACGCCCCGGCCACTCTGCAGCGGTaGCAGGTGTGTGCGGGACATGGCAGCGAGGACAGCCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: PTPWTDTDAPATLQR*QVCAGHGSEDSLVH
Trigger: GTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTCCAGGGAGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS-3UTR CAA 90 bp GCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: APKTPHAQAAHTRVSLGSIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...GGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GTGCCCTCCCCGCCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: VPSPPSPPSLLLFLLVEAGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...GGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGGCGGGGAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp GTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: VSAHVQLSLLGDLRVLVGSLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...GCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp CGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RARPAVAARGLAGLGGLSSLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...GCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HSKTPTLSSRGLASWALCGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GTGGCTGGTCCCAGGCCCCAGAGATACTGCGTAGTGAACTGGCCGCTGGAACGCGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VAGPRPQRYCVVNWPLERGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...GCGTTCCAGCGGCCAGTTCACTACGCAGTATCTCTGGGGCCTGGGACCAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGGGCTTCCTGGGCCCTTaGTGCTGGCTGCTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGGFLGP*CWLLSR
Trigger: CCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCC...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGCAGCTTCCGGCTACGTaGCGCTTTGCAAGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPQLPAT*RFARSH
Trigger: GTGAGACCTTGCAAAGCGCAACGTAGCCGGAAGCTG...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp GGCCCTGCAGGCCCTGAGTGGGTCCATGAGGCAGCCACCCGGGCATaGGGAGGGGAACAGCATGGCAGGAACACCCCCTTCTACGCTGGG +
Preference number: 5 (lower is better)
Translates to: GPAGPEWVHEAATRA*GGEQHGRNTPFYAG
Trigger: CCCAGCGTAGAAGGGGGTGTTCCTGCCATGCTGTTCCCCTCCTCATGCCCGGGTGGCTGCCTCATGGACCCACTCAGGGCCTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 90 bp TCCCGTCTCAGAGGACAGCGGCCACTGCCAAGCTGGGCTGAGGGCTaGACGGGGCACACCCTGCTCTCACGCCCAGGGCCGTGGAATATG +
Preference number: 5 (lower is better)
Translates to: SRLRGQRPLPSWAEG*TGHTLLSRPGPWNM
Trigger: CATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCAGCCCTCAGCCCAGCTTGGCAGTGGCCGCTGTCCTCTGAGACGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS GCA 90 bp GCCCCGACTGGGGGAAGCCCTGGCCAGAGCAAAGAGACGCTCCGTTaGCTCGAAGTGCAGACGCGTCCAGTGTGCCGCAGGCACAGCACC +
Preference number: 5 (lower is better)
Translates to: APTGGSPGQSKETLR*LEVQTRPVCRRHST
Trigger: GGTGCTGTGCCTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCCAGTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 90 bp AGACGCCCCGGCCACTCTGCAGCGGTGCCAGGTGTGTGCGGGACATaGCAGCGAGGACAGCCTCGTGCACAGACCTCAAGAGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: RRPGHSAAVPGVCGT*QRGQPRAQTSRAPT
Trigger: GGTGGGAGCTCTTGAGGTCTGTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000395285.3
ENST00000518691.1
CDS-3UTR CAA 90 bp CCTCCTGCCTGGCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: PPAWPRPLSHPPASGPRAAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...GGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGCCAGGCAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGCCGAGCCCCACACCTCCCAGCTGTCCGAGCTCCTCCTCTCGGTGGAGGTGTCTTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: GRAPHLPAVRAPPLGGGVFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...GACACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTGGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp CCCAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PRGVWDGTAPTQAGQQAAFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...GGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGATCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGSLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CAA 90 bp CCACACAGGCTGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCATCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PHRLDSKPPPRTEDSPRASPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...TGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCAGCCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGTCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGSPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCAAGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SSCRCSGTCGSWWAQHFQGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...TTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAAGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVEGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: KPPPRTEDSPRAGGAHPGPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...ACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS TCA 90 bp ACTGCACATGGGAGGCCCCAAGGGAAGCAGCCCTACCCACCAGACTaGACCCTGTGGGCCTGGCCCACGCCAGGCGTCCCCAGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: TAHGRPQGKQPYPPD*TLWAWPTPGVPSSQ
Trigger: TTGAGAGCTGGGGACGCCTGGCGTGGGCCAGGCCCACAGGGTTCAGTCTGGTGGGTAGGGCTGCTTCCCTTGGGGCCTCCCATGTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS GCA 90 bp TCGCACACACGTACAGACACAGACGCCCCGGCCACTCTGCAGCGGTaGCAGGTGTGTGCGGGACATGGCAGCGAGGACAGCCTCGTGCAC +
Preference number: 5 (lower is better)
Translates to: SHTRTDTDAPATLQR*QVCAGHGSEDSLVH
Trigger: GTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTACGTGTGTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395285.3
ENST00000518691.1
CDS CCA 90 bp GCTGAGGGCTGCACGGGGCACACCCTGCTCTCACGCCCAGGGCCGTaGAATATGGAGACTGGCTTCGACTGTGCCCGCGTATCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AEGCTGHTLLSRPGP*NMETGFDCARVSGR
Trigger: CCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCAGCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 90 bp GGCTGGCTGGGACTCACTGCAATCAGACCCTGCACCGCGCATGCCTaGGTCCCACACCCACTGCACATGGGAGGCCCCAAGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GWLGLTAIRPCTAHA*VPHPLHMGGPKGSS
Trigger: GCTGCTTCCCTTGGGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGCAGGGTCTGATTGCAGTGAGTCCCAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGATTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TCTCGTTCAGGCTGTGGCCCAGCTCGGACGCCTTCTGACTCGCTTGGGATCCAAGGCGGCACTGCCTTCTaGGTGCCCTCCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SRSGCGPARTPSDSLGIQGGTAF*VPSPPS
Trigger: GGAGGGCGGGGAGGGCACCAAGAAGGCAGTGCCGCC...TTGGATCCCAAGCGAGTCAGAAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CAA 90 bp AGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RRRNDEGRVQTRSRPGALRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...CAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS TCA 90 bp GGCTGGCCAGAGACTCGGTGCACCATGGACGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGGGCAGGTGATGACTCCAGAGACCAC +
Preference number: 5 (lower is better)
Translates to: GWPETRCTMDGSVLG*GGVQFWAGDDSRDH
Trigger: GTGGTCTCTGGAGTCATCACCTGCCCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS GCA 90 bp GACAGACACAGACGCCCCGGCCACTCTGCAGCGGTGCCAGGTGTGTaGGGGACATGGCAGCGAGGACAGCCTCGTGCACAGACCTCAAGA +
Preference number: 5 (lower is better)
Translates to: DRHRRPGHSAAVPGV*GTWQRGQPRAQTSR
Trigger: TCTTGAGGTCTGTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS GCA 90 bp GGGGAAGCCCTGGCCAGAGCAAAGAGACGCTCCGTTGCCTCGAAGTaGAGACGCGTCCAGTGTGCCGCAGGCACAGCACCAACCACAGCG +
Preference number: 5 (lower is better)
Translates to: GEALARAKRRSVASK*RRVQCAAGTAPTTA
Trigger: CGCTGTGGTTGGTGCTGTGCCTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 90 bp ACTGGGCTGGCTGGGACTCACTGCAATCAGACCCTGCACCGCGCATaGCTGGGTCCCACACCCACTGCACATGGGAGGCCCCAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: TGLAGTHCNQTLHRA*LGPTPTAHGRPQGK
Trigger: CTTCCCTTGGGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGCAGGGTCTGATTGCAGTGAGTCCCAGCCAGCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS CCA 90 bp TCTGCGGCTGGCCAGAGACTCGGTGCACCATGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGTTCTGGGCAGGTGATGACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SAAGQRLGAPWTAAS*AEVGSSSGQVMTPE
Trigger: CTCTGGAGTCATCACCTGCCCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCAGCCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS CCA 90 bp GCTGCACGGGGCACACCCTGCTCTCACGCCCAGGGCCGTGGAATATaGAGACTGGCTTCGACTGTGCCCGCGTATCTGGCAGGCTCCCTA +
Preference number: 5 (lower is better)
Translates to: AARGTPCSHAQGRGI*RLASTVPAYLAGSL
Trigger: TAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 90 bp TCAGACCCTGCACCGCGCATGCCTGGGTCCCACACCCACTGCACATaGGAGGCCCCAAGGGAAGCAGCCCTACCCACCAGACTGAACCCT +
Preference number: 5 (lower is better)
Translates to: SDPAPRMPGSHTHCT*EAPREAALPTRLNP
Trigger: AGGGTTCAGTCTGGTGGGTAGGGCTGCTTCCCTTGGGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGCAGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS-3UTR CAA 90 bp GCCACGTCCGCTATCGCACCCTCCTGCATCAGGGCCGAGGGCCCACCCTGCGCTCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: ATSAIAPSCIRAEGPPCAQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...AGCGCAGGGTGGGCCCTCGGCCCTGATGCAGGAGGGTGCGATAGCGGACGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CGAGAAGGGACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: REGTPHVADSSARGWSQAIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...GGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGTCCCTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 5 (lower is better)
Translates to: APKTPHAQAAHTRVSLGSRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...GGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 5 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp GATGTTCTTAGGGGGTGGAAGCCCCACCGGGCTTCAGAGGCCACCTaGCTGGGATGTGTCCAGGCCGAGTCCTGGGTCCGAAGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: DVLRGWKPHRASEAT*LGCVQAESWVRRSS
Trigger: CGAGCTCCTTCGGACCCAGGACTCGGCCTGGACACATCCCAGTCAGGTGGCCTCTGAAGCCCGGTGGGGCTTCCACCCCCTAAGAACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522403.6
CDS TCA 90 bp TCACTTCTTAGGGGGTGGAAGCCCCACCGGGCTTCAGAGGCCACCTaGCTGGGATGTGTCCAGGCCGAGTCCTGGGTCCGAAGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SLLRGWKPHRASEAT*LGCVQAESWVRRSS
Trigger: CGAGCTCCTTCGGACCCAGGACTCGGCCTGGACACATCCCAGTCAGGTGGCCTCTGAAGCCCGGTGGGGCTTCCACCCCCTAAGAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550188.1
CDS GCA 90 bp TACAGACACAGACGCCCCGGCCACTCTGCAGCGGTGCCAGGTGTGTaGGGGACATGGCAGCGAGGACAGCCTCGTGCACAGACCTCAAGA +
Preference number: 5 (lower is better)
Translates to: YRHRRPGHSAAVPGV*GTWQRGQPRAQTSR
Trigger: TCTTGAGGTCTGTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395285.3
ENST00000518691.1
CDS CCA 90 bp GCCGCAGTGGGCCAAGTTGTTTCCATATCCCTCGGGCTGTCAGGCTaGGCAGCTCTCCTCCCGTCTCAGAGGACAGCGGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: AAVGQVVSISLGLSG*AALLPSQRTAATAK
Trigger: CTTGGCAGTGGCCGCTGTCCTCTGAGACGGGAGGAGAGCTGCCCAGCCTGACAGCCCGAGGGATATGGAAACAACTTGGCCCACTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395285.3
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 90 bp GGGGCACACCCTGCTCTCACGCCCAGGGCCGTGGAATATGGAGACTaGCTTCGACTGTGCCCGCGTATCTGGCAGGCTCCCTACCTTGGA +
Preference number: 5 (lower is better)
Translates to: GAHPALTPRAVEYGD*LRLCPRIWQAPYLG
Trigger: TCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 90 bp ACATGCAAAGGCCTGAGGCCACACTGCCCCGACTGGGGGAAGCCCTaGCCAGAGCAAAGAGACGCTCCGTTGCCTCGAAGTGCAGACGCG +
Preference number: 5 (lower is better)
Translates to: TCKGLRPHCPDWGKP*PEQRDAPLPRSADA
Trigger: CGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCCAGTCGGGGCAGTGTGGCCTCAGGCCTTTGCATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 90 bp AGAGCAAAGATCCTCCCCTTTGCACTGCGTTCAAGGGAGCGCAGGTaGCCAGGAAACCCTGCTCAGCAGCTCTGCGCCCAGTGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RAKILPFALRSRERR*PGNPAQQLCAQCPR
Trigger: GCGGGGGCACTGGGCGCAGAGCTGCTGAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CCA 90 bp TTCTTAGGGGGTGGAAGCCCCACCGGGCTTCAGAGGCCACCTGACTaGGATGTGTCCAGGCCGAGTCCTGGGTCCGAAGGAGCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: FLGGGSPTGLQRPPD*DVSRPSPGSEGARE
Trigger: TTCCCGAGCTCCTTCGGACCCAGGACTCGGCCTGGACACATCCCAGTCAGGTGGCCTCTGAAGCCCGGTGGGGCTTCCACCCCCTAAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522403.6
ENST00000550188.1
CDS-3UTR CAA 90 bp ACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTGCCTCCCGTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: TPHAQAAHTRVSLGSCLPSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...CGGGAGGCAGGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGGCCCTACCAGTTCTGGTTGTCCCAGCCATCATCAGTGGGCACGGCCGGCGGGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: WALPVLVVPAIISGHGRRAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...CCGCCGGCCGTGCCCACTGATGATGGCTGGGACAACCAGAACTGGTAGGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: APKTPHAQAAHTRVSLGSVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...GGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGGGGAGTGTGGGACGGGACGGCCCCCACACAGGCTGGACAGCAAGCCGCCCCGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: QGSVGRDGPHTGWTASRPVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...GGGGCGGCTTGCTGTCCAGCCTGTGTGGGGGCCGTCCCGTCCCACACTCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGAATCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: WAGTDLGSMLPSQGAGVESLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...TTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCACCAGGCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: IPLSKVESTPPRSTQPTRLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...CCTGGTGGGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: AGGCFGDQIPPWQPRTPALLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...GGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCGGCTTCCTGGGCCCTTaGTGCTGGCTGCTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAGFLGP*CWLLSR
Trigger: CCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCC...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCCTTCCCGTATGCTTTATaGGAATGCTGTCAGGTCCGC +
Preference number: 5 (lower is better)
Translates to: APKTPHAQAAHTRVSLGSFPYAL*ECCQVR
Trigger: GCGGACCTGACAGCATTCCAATAAAGCATACGGGAA...GGACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGTCTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: RTEDSPRAGGAHPGLPRVSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...GACCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGACAGCAAGCCGCCCCCACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: WTASRPHAPKTPHAQAAHSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...GTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTGGGGGCGGCTTGCTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGGGTGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: GRRVTRGSTSSSPRGGEGGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...ACCCTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: KTPTLSSRGLASWALCAGPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVRRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGTGAGCGCAGAGCCCCGGCCTaGAGTCCAAGAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QGRRVTRGSTSSSPRGGERRAPA*SPRMPR
Trigger: CCTGGGCATTCTTGGACTCAAGGCCGGGGCTCTGCG...CTCACCTCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCCGCCTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTRLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCG...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp GGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGGGAGGGCGGGGACAGACCTaGGCTCCATGCTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: GRQGRRVTRGSTSSSPRGGRGQT*APCCQV
Trigger: GACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCC...TCCCCGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGGGCGGGGACAGACCTaGGCTCCATGCTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRGRGQT*APCCQV
Trigger: GACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCC...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp CCAGCTGCCACAAACGGCAGGGCAGCCCCACACCATGGGCAAGAGTaGATCGGGCCCATCTCTACCTTATCCCTAAAGAGGGCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: PAATNGRAAPHHGQE*IGPISTLSLKRAAA
Trigger: AGCCGCGGCCCTCTTTAGGGATAAGGTAGAGATGGGCCCGATTCACTCTTGCCCATGGTGTGGGGCTGCCCTGCCGTTTGTGGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522959.5
CDS GCA 90 bp GCTCTCACGCCCAGGGCCGTGGAATATGGAGACTGGCTTCGACTGTaGCCGCGTATCTGGCAGGCTCCCTACCTTGGACGCCAACTGAGA +
Preference number: 5 (lower is better)
Translates to: ALTPRAVEYGDWLRL*PRIWQAPYLGRQLR
Trigger: TCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 90 bp GAAGCTGCTGAGAAAGGAGCTCAGCCTCTCCTGATCCTGGGTCAGTaGAGTCGAGGCCACACGGCCACCTGGGGATGTGGTGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: EAAEKGAQPLLILGQ*SRGHTATWGCGVRP
Trigger: AGGCCTCACACCACATCCCCAGGTGGCCGTGTGGCCTCGACTCCACTGACCCAGGATCAGGAGAGGCTGAGCTCCTTTCTCAGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468975.6
ENST00000518794.6
ENST00000520022.2
CDS CCA 90 bp TTCACCTTCTCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTGTAGGAAGGGAAGTCACGTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: FTFSCAGLRTFSFRL*PSSDACRKGSHVSP
Trigger: GGGGCTCACGTGACTTCCCTTCCTACAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp AGGGAGGAGAGCACCTCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: REESTSRTNCTSFGRMHGFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...GCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGAGGTGCTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CACGCACCGAAGACTCCCCACGCGCAGGCGGCGCACACCCGGGTCTCCCTAGGGAAACTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: HAPKTPHAQAAHTRVSLGKLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGTTT...CCCTAGGGAGACCCGGGTGTGCGCCGCCTGCGCGTGGGGAGTCTTCGGTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR CAA 90 bp CCCTCCCCGCCGTCGCTGTTGCTGTTCCTGTTGGTGGAGGCCGAGCCCCACACCGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: PSPPSLLLFLLVEAEPHTVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...GGTGTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAGCGACGGCGGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp GCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: AKTEGHTGQTRETSHTWQGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...CTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGTCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: EILRSELAAGTQSQASVLSLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCTCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVSPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGATCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPRSPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGGGCTTCCTGGGCCCTTaGTGCTGGCTGCTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: EILRSELAAGTQSQASVLGFLGP*CWLLSR
Trigger: CCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCC...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACACTCAAAGACCCGGGCGGGGACAGACCTaGGCTCCATGCTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: EIPRGRPRLSLEKDTQRPGRGQT*APCCQV
Trigger: GACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCC...GGGTCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp CAGCATGGCAGGAACACCCCCTTCTACGCTGGGACCCCTCAGCTCTaGGCATGTGGCCTGAGAAGAGGGAACCAGGCAGCTTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: QHGRNTPFYAGTPQL*ACGLRRGNQAASGA
Trigger: AGCACCTGAAGCTGCCTGGTTCCCTCTTCTCAGGCCACATGCTCAGAGCTGAGGGGTCCCAGCGTAGAAGGGGGTGTTCCTGCCATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 90 bp CTCCTGGGTGTGATTCTGAACCCGAGGACAGCCAGATCACAGCCCTaGCCACCAAGTGGGAACCGCGGGGCCCCTACCCACATCCTAAAG +
Preference number: 5 (lower is better)
Translates to: LLGVILNPRTARSQP*PPSGNRGAPTHILK
Trigger: CTTTAGGATGTGGGTAGGGGCCCCGCGGTTCCCACTTGGTGGTCAGGGCTGTGATCTGGCTGTCCTCGGGTTCAGAATCACACCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 90 bp CAGGCCCACCTGCCCGCACCTTGGCTCCATGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCACATGTGGAACACCACATCCCACTGT +
Preference number: 5 (lower is better)
Translates to: QAHLPAPWLHAAKSR*WRGNRHMWNTTSHC
Trigger: ACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTGCGGGCAGGTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395285.3
CDS CCA 90 bp GCCCACCTGCCCGCACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTaGCGTGGAAACAGGCACATGTGGAACACCACATCCCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: AHLPAPWLHAAKSRC*RGNRHMWNTTSHCP
Trigger: TGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTGCGGGCAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395285.3
CDS CCA 90 bp AGGGCCGTGGAATATGGAGACTGGCTTCGACTGTGCCCGCGTATCTaGCAGGCTCCCTACCTTGGACGCCAACTGAGAGACCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: RAVEYGDWLRLCPRI*QAPYLGRQLRDPTG
Trigger: TCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS-3UTR CAA 90 bp TGGCCAAGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: WPRLRVTQGRQGRRVTRGAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...GCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GAACGACGAGGGCAGAGTGCAAACACGAAGTCGCCCGGGGGCGCTGGGGACGGGGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: ERRGQSANTKSPGGAGDGEDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...CCCGTCCCCAGCGCCCCCGGGCGACTTCGTGTTTGCACTCTGCCCTCGTCGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GTGTCCGCGCACGTCCAGCTGTCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VSAHVQLSLLGDLRVLVGEDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...GCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGGCTGCTCCAGGAGTGCTGCAGACGGCGACCGGGAAGTGGGGTGACCAGGGAGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: QAAPGVLQTATGKWGDQGVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTCCTGGAGCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACACTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: TNCTSFGRMHGWPRLRVTLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...TGTGACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AGACTGAGGGTCACACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCCCCGCCGTCGCTGTaGCTGTTCCTGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RLRVTQGRQGRRVTRGSTSPPSL*LFLLVE
Trigger: CTCCACCAACAGGAACAGCAACAGCGACGGCGGGGA...TGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGTGTGACCCTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCGGGCGGGGACAGACCTaGGCTCCATGCTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQIGRGQT*APCCQV
Trigger: GACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCC...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CCTCGGAGCACTCAGCCCACCAGGGTCCAAGCAGCCCTCGGGAGATACCACGCGTTCCCGTATGCTTTATaGGAATGCTGTCAGGTCCGC +
Preference number: 5 (lower is better)
Translates to: PRSTQPTRVQAALGRYHAFPYAL*ECCQVR
Trigger: GCGGACCTGACAGCATTCCAATAAAGCATACGGGAA...CGCGTGGTATCTCCCGAGGGCTGCTTGGACCCTGGTGGGCTGAGTGCTCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGGACGAGCACAGGCAGCTTCCGGCTACGTaGCGCTTTGCAAGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: RSHPVLQVAESLGWDEHRQLPAT*RFARSH
Trigger: GTGAGACCTTGCAAAGCGCAACGTAGCCGGAAGCTG...CCTGTGCTCGTCCCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp CAAAGGCGCGTCCTAGAGCCATGCACAGCTCCACGCCTGCAGTCCTaGGCTTTCATGGTGAGCCTCACATGGGTACTGCCTCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: QRRVLEPCTAPRLQS*AFMVSLTWVLPPGC
Trigger: ACACCCAGGAGGCAGTACCCATGTGAGGCTCACCATGAAAGCTCAGGACTGCAGGCGTGGAGCTGTGCATGGCTCTAGGACGCGCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 90 bp TTGGACCCCCAGCATGACTCATTCAGGCGGATACCGTCATCAAACTaGGCATCCACCTATACAGCCGACTGGAGGGAGGGGCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LDPQHDSFRRIPSSN*ASTYTADWREGRAG
Trigger: CCCTGCCCGCCCCTCCCTCCAGTCGGCTGTATAGGTGGATGCTCAGTTTGATGACGGTATCCGCCTGAATGAGTCATGCTGGGGGTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS CCA 90 bp CCTGCCCGCACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTaGAAACAGGCACATGTGGAACACCACATCCCACTGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: PARTLAPCCQVKVLA*KQAHVEHHIPLSKV
Trigger: CACCTTGGACAGTGGGATGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTGCGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395285.3
CDS-3UTR CAA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TCGCTGCTCGGGGACTTGCGGGTCTTGGTGGGCTCAGCACTTCCAAAGGTCTCCCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: SLLGDLRVLVGSALPKVSQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...GGAGACCTTTGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370275.8
ENST00000520485.5
CDS-3UTR CAA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGATTCCCCTGGGCCCCTaGATAGGAGCCGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRIPLGP*IGAEVI
Trigger: GATGACCTCGGCTCCTATCAAGGGGCCCAGGGGAAT...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTCCCTAGGGTGGTTTGTAGCGCCCTCCTaGGCTGCCGAGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: SLKSRSHPVLQVAESLGWFVAPS*AAEANR
Trigger: CCGGTTTGCCTCGGCAGCCAAGGAGGGCGCTACAAA...CCACCCTAGGGACTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CTTCTGAGGCGGTGGCGTGTTCCCAAACCCCACGTAGCGATTCCCCTGGGCCCCGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: LLRRWRVPKPHVAIPLGPVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...GGGGCCCAGGGGAATCGCTACGTGGGGTTTGGGAACACGCCACCGCCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CAA 90 bp CCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCATCGCTGCTCGGGGACTaGCGGGTCTTGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PPCAPFSSRVFQDGQVPASLLGD*RVLVGS
Trigger: TGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGA...TGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000549076.1
CDS-3UTR CAA 90 bp CCGCCTCTGACCTCAGGTCCAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PPLTSGPTTAGGCFGDQILLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...GATTTGATCACCGAAGCAGCCACCTGCTGTAGTTGGACCTGAGGTCAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACACCACATCCCACTGTCCAAGGTGGAGTCCACCCCTCCTCGGAGCACTCAGCCCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: TPHPTVQGGVHPSSEHSAPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...GGCTGAGTGCTCCGAGGAGGGGTGGACTCCACCTTGGACAGTGGGATGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGCTGGCGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: KTPTLSSRGLASWALCAGVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GCCAGCACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGGGCTTCCTGGGCCCTTaGTGCTGGCTGCTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: WVKWKEEERRGQSANTKSGFLGP*CWLLSR
Trigger: CCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCC...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS GCA 90 bp GGCCGGAAAGGGAAGAACTCGTCACAGAGCAAAGATCCTCCCCTTTaGACTGCGTTCAAGGGAGCGCAGGTGGCCAGGAAACCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GRKGKNSSQSKDPPL*TAFKGAQVARKPCS
Trigger: TGAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTCTTCCCTTTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CCA 90 bp AGGCCACAGTCCAGCTGCCACAAACGGCAGGGCAGCCCCACACCATaGGCAAGAGTGAATCGGGCCCATCTCTACCTTATCCCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: RPQSSCHKRQGSPTP*ARVNRAHLYLIPKE
Trigger: CTCTTTAGGGATAAGGTAGAGATGGGCCCGATTCACTCTTGCCCATGGTGTGGGGCTGCCCTGCCGTTTGTGGCAGCTGGACTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522959.5
CDS-3UTR CAA 90 bp TGGTGGGACGGTGCTGATGCAGGGGAGCCACAGAGGGTTACGACCGACGCGGGTTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: WWDGADAGEPQRVTTDAGSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...ACCCGCGTCGGTCGTAACCCTCTGTGGCTCCCCTGCATCAGCACCGTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGAGCCGCGGCTCTGCTGTaGTACTTCTCCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGAAALL*YFSCKD
Trigger: GTCCTTGCAGGAGAAGTACAACAGCAGAGCCGCGGC...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GTCTCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: VSLGSCLPRRCPHTAVADQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...ATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TCCCTAGGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLGSCLPRRCPHTAVADSFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...AGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GAGATACTGCGTAGTGAACTGGCCGCTGGAACGCAGTCACAGGCCTCTGTGCTGTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: EILRSELAAGTQSQASVLFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...CAGCACAGAGGCCTGTGACTGCGTTCCAGCGGCCAGTTCACTACGCAGTATCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGTGTGGGTGTGCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GVPGWSSSSTENSSGVGVLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...CACACCCACACCTGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AAGCAGCCCTCGGGAGATACCACGCGGCCGCCCACGTCTCAGCTTGGAGAAAGACGCCTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: KQPSGDTTRPPTSQLGERRLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCG...TCTTTCTCCAAGCTGAGACGTGGGCGGCCGCGTGGTATCTCCCGAGGGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS GCA 90 bp GAAAGGGAAGAACTCGTCACAGAGCAAAGATCCTCCCCTTTGCACTaGGTTCAAGGGAGCGCAGGTGGCCAGGAAACCCTGCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EREELVTEQRSSPLH*VQGSAGGQETLLSS
Trigger: GCTGCTGAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTCTTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS-3UTR CAA 90 bp CTGGGCGGGGACAGACCTTGGCTCCATGCTGCCAAGTCAAGGTGCTGGCGTGGACACTCAAAACAAACGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LGGDRPWLHAAKSRCWRGHSKQT*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG...TCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTCTGTCCCCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CAA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTCACTCAAAACAAACGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: HSKTPTLSSRGLASWALCHSKQT*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CAA 90 bp CACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGCTTCCTGGGCCCTTTGTGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HSKTPTLSSRGLASWALCEDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...ACAAAGGGCCCAGGAAGCCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACACCTCACGTCGCTGACAGCTCGGCACGTGGCTGGTCCCAGGCCCCAGAGATAGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TPHVADSSARGWSQAPEIEDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...TATCTCTGGGGCCTGGGACCAGCCACGTGCCGAGCTGTCAGCGACGTGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCTGTTGCTGTTCCTGTaGGTGGAGGCCGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSLLLFL*VEAEPH
Trigger: GTGGGGCTCGGCCTCCACCAACAGGAACAGCAACAG...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCCGCCTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVRLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCG...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS TCA 90 bp AGCAGCAGCAAGATAAGAGCAGAGGGAGAAGTGACAGTTAGTGGCTaGCCGGGCCGCAGTGGGCCAAGTTGTTTCCATATCCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: SSSKIRAEGEVTVSG*PGRSGPSCFHIPRA
Trigger: AGCCCGAGGGATATGGAAACAACTTGGCCCACTGCGGCCCGGTCAGCCACTAACTGTCACTTCTCCCTCTGCTCTTATCTTGCTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395285.3
ENST00000518618.2
ENST00000518691.1
CDS-3UTR CAA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCACTCAAAACAAACGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYHSKQT*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CAA 90 bp GGGTCCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: GSCLPRRCPHTAVADSWVREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...GACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TTATTGGAATGCTGTCAGGTCCGCGCCTTCCACCTGGGCCCTCACACACAGCAACCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LLECCQVRAFHLGPHTQQPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...TTGCTGTGTGTGAGGGCCCAGGTGGAAGGCGCGGACCTGACAGCATTCCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TCACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 5 (lower is better)
Translates to: SRTNCTSFGRMHGWPRLRRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...CCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGTTCCCGTATGCTTTATaGGAATGCTGTCAGGTCCGC +
Preference number: 5 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEFPYAL*ECCQVR
Trigger: GCGGACCTGACAGCATTCCAATAAAGCATACGGGAA...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CAACTACAGCAGGTGGCTGCTTCGGTGATCAAATCCCTCCGTGGCAGCCAAGGACAGAGCGCACAAAGGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: QLQQVAASVIKSLRGSQGQSAQR*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACCTTTGTGCGCTCTG...TCCTTGGCTGCCACGGAGGGATTTGATCACCGAAGCAGCCACCTGCTGTAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519604.5
CDS TCA 90 bp GACTGTGCCCGCGTATCTGGCAGGCTCCCTACCTTGGACGCCAACTaGGAGACCCCACTGGAGACATCATCAAAAATCTTTCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DCARVSGRLPTLDAN*ETPLETSSKIFPSF
Trigger: GAAGGAGGGAAAGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS TCA 90 bp ATGTGGCCTGAGAAGAGGGAACCAGGCAGCTTCAGGTGCTGCACGTaGCGTCAGACTCAGGATAGTTTCAGATGCACCAGGGTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: MWPEKREPGSFRCCT*RQTQDSFRCTRVQK
Trigger: CTTCTGCACCCTGGTGCATCTGAAACTATCCTGAGTCTGACGTCACGTGCAGCACCTGAAGCTGCCTGGTTCCCTCTTCTCAGGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 90 bp AGACTGGCTTCGACTGTGCCCGCGTATCTGGCAGGCTCCCTACCTTaGACGCCAACTGAGAGACCCCACTGGAGACATCATCAAAAATCT +
Preference number: 5 (lower is better)
Translates to: RLASTVPAYLAGSLP*TPTERPHWRHHQKS
Trigger: AGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS-3UTR CAA 90 bp CTCAGCTTGGAGAAAGACACTCAAAGACCCCCACGCTCAGCTCTCGGGGGCTGGTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: LSLEKDTQRPPRSALGGWSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...CCAGCCCCCGAGAGCTGAGCGTGGGGGTCTTTGAGTGTCTTTCTCCAAGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACCAAGAGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SNPSVAAKDTGPPHQLPREDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...TCTTGGTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp GGTGATCAAATCCCTCCGTGGCAGCCAAGGACACCGGCCCTCCACACCAGCTACAAACTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: GDQIPPWQPRTPALHTSYKLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGTTT...GTAGCTGGTGTGGAGGGCCGGTGTCCTTGGCTGCCACGGAGGGATTTGATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353546.7
ENST00000519604.5
CDS-3UTR CAA 90 bp CGCCAGGAGGGCTCGCTGAAATCTCGGTCCCATCCTGTTCTGCAAGTGGCTGAGGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: RQEGSLKSRSHPVLQVAEVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...CTCAGCCACTTGCAGAACAGGATGGGACCGAGATTTCAGCGAGCCCTCCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTGGCTTCCTGGGCCCTTaGTGCTGGCTGCTTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SVSASIISSISIFTTPVTGFLGP*CWLLSR
Trigger: CCGGGAAAGCAGCCAGCACAAAGGGCCCAGGAAGCC...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CCCACCCTGCGCTCCTTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCCGCCTTCTGACTCGCTaGGGATCCAAACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: PTLRSFFFQGVPGWSSSSRLLTR*GSKLCS
Trigger: GCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGCG...GCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAAGGAGCGCAGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS TCA 90 bp GTTTCAGATGCACCAGGGTGCAGAAGCTTCTCCTCTGTTACCTTCTaGCTCGCTTGGGATCCAAACTTTGTAGCGCCCTCCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VSDAPGCRSFSSVTF*LAWDPNFVAPSLAA
Trigger: GGCAGCCAAGGAGGGCGCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGTAACAGAGGAGAAGCTTCTGCACCCTGGTGCATCTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS-3UTR CAA 90 bp ACGTACAAACTGCACGAGCTTCGGGCGCATGCATGGCTGGCCAAGACTGAGGGTCACTCAAAACAAACGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: TYKLHELRAHAWLAKTEGHSKQT*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG...ACCCTCAGTCTTGGCCAGCCATGCATGCGCCCGAAGCTCGTGCAGTTTGTACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
CDS-3UTR CAA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAGGGGACTTGCGGGTCTaGGTGGGCTCAGCACTTCCA +
Preference number: 5 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSGDLRV*VGSALP
Trigger: TGGAAGTGCTGAGCCCACCAAGACCCGCAAGTCCCC...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp ACAGGGCAGACAAGGGAGACGAGTCACACGTGGCAGCACATCATCCAGTCCTCGGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: TGQTRETSHTWQHIIQSSVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...CGAGGACTGGATGATGTGCTGCCACGTGTGACTCGTCTCCCTTGTCTGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATCGCCCACGTCTCAGCTaGGAGAAAGACACTCAAAGA +
Preference number: 5 (lower is better)
Translates to: PASRDAVLTLQLLILGSNRPRLS*EKDTQR
Trigger: TCTTTGAGTGTCTTTCTCCAAGCTGAGACGTGGGCG...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS TCA 90 bp CGACAAAGCAAGACTCCGTCGAGTACAGGGAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCTTCTGAGGCGGTGGCGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: RQSKTPSSTGRTWRC*GSHLLSSEAVACSQ
Trigger: TTGGGAACACGCCACCGCCTCAGAAGAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGACGGAGTCTTGCTTTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518601.6
CDS TCA 90 bp ACATCTGAATGCTCACTCCTGACCGCAGGACTTGGACCCCCAGCATaGCTCATTCAGGCGGATACCGTCATCAAACTGAGCATCCACCTA +
Preference number: 5 (lower is better)
Translates to: TSECSLLTAGLGPPA*LIQADTVIKLSIHL
Trigger: TAGGTGGATGCTCAGTTTGATGACGGTATCCGCCTGAATGAGTCATGCTGGGGGTCCAAGTCCTGCGGTCAGGAGTGAGCATTCAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS CCA 90 bp TATCTGGCAGGCTCCCTACCTTGGACGCCAACTGAGAGACCCCACTaGAGACATCATCAAAAATCTTTCCCTCCTTCACCTGCACGGATG +
Preference number: 5 (lower is better)
Translates to: YLAGSLPWTPTERPH*RHHQKSFPPSPARM
Trigger: CATCCGTGCAGGTGAAGGAGGGAAAGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518618.2
CDS-3UTR CAA 90 bp TCCCTGGACCTTGGACGCCAACTGAGAGACCCCACTGGAGACATCATCAAAAATCAGTCTTCAAAAGCCTaGTCCGAGGAGGCGGTCACA +
Preference number: 5 (lower is better)
Translates to: SLDLGRQLRDPTGDIIKNQSSKA*SEEAVT
Trigger: TGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTG...ATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CAA 90 bp CCTGCCTCCCGAGACGCTGTCCTCACACTGCAGTTGCTGATTCTTGGGTCAAATAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: PASRDAVLTLQLLILGSNREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCGTTCCCGTATGCTTTATaGGAATGCTGTCAGGTCCGC +
Preference number: 5 (lower is better)
Translates to: WVKWKEEERRGQSANTKSFPYAL*ECCQVR
Trigger: GCGGACCTGACAGCATTCCAATAAAGCATACGGGAA...CGACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCATTCTCCTGCGCAGGCTaGAGGACGTTCTCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSFSCAG*RTFSFR
Trigger: CCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAA...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTGTCTATGTTGCTGTTTaGGAAGTGGTCCAGACCGCT +
Preference number: 5 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSVYVAV*EVVQTA
Trigger: AGCGGTCTGGACCACTTCCAAAACAGCAACATAGAC...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACCCCTACCAGTTCTGGTaGTCCCAGCCATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHPYQFW*SQPSSV
Trigger: CACTGATGATGGCTGGGACAACCAGAACTGGTAGGG...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CTTGGGTCAAATGGAAGGAGGAGGAACGACGAGGGCAGAGTGCAAACACGAAGTCACTCAAAACAAACGTaGTTCTCATCCTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LGSNGRRRNDEGRVQTRSHSKQT*FSSCTL
Trigger: CAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG...ACTTCGTGTTTGCACTCTGCCCTCGTCGTTCCTCCTCCTTCCATTTGACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000520485.5
CDS-3UTR CAA 90 bp TGGTCGGATGGCAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: WSDGSVSASIISSISIFTREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...GGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTGCCATCCGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CTCCAGCCCGAGTACAGGGAGGACATGGCGTTGTTGAGGAAGTCATCTTCTTTCGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LQPEYREDMALLRKSSSFVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520485.5
CDS-3UTR CAA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACGAGGACATGGCGTTGTaGAGGAAGTCATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHEDMAL*RKSSSF
Trigger: GAAAGAAGATGACTTCCTCAACAACGCCATGTCCTC...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp TTTTTCTTCCAGGGTGTTCCAGGATGGTCAAGTTCCAGCACTGAGAACAGCTCAAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: FFFQGVPGWSSSSTENSSREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...TGAGCTGTTCTCAGTGCTGGAACTTGACCATCCTGGAACACCCTGGAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTAGGGAGGACATGGCGTaGTTGAGGAAGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: SVSASIISSISIFTTPVTREDMA*LRKSSS
Trigger: AGAAGATGACTTCCTCAACAACGCCATGTCCTCCCT...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp CAGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACGTCCTCACACTGCAGTaGCTGATTCTTGGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: QRERQYHFQHFHLYHSSHVLTLQ*LILGSN
Trigger: ATTTGACCCAAGAATCAGCAACTGCAGTGTGAGGAC...GTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS-3UTR CAA 90 bp AGCGTGAGCGCCAGTATCATTTCCAGCATTTCCATCTTTACCACTCCAGTCACTTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGC +
Preference number: 5 (lower is better)
Translates to: SVSASIISSISIFTTPVTSMSFH*SIVTER
Trigger: GCGCTCTGTTACTATGGACAAGTGGAAGGACATTGA...AGTGACTGGAGTGGTAAAGATGGAAATGCTGGAAATGATACTGGCGCTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
CDS GCA 72 bp CGGGGTCAGGCCAGGGCCGAGGTAGGGCCGCCGCACTaGAATGAGGATGCGCCCGGTCGCCCACCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: RGQARAEVGPPH*NEDAPGRPPAA
Trigger: GGCGGCTGGTGGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTACCTCGGCCCTGGCCTGACCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
ENST00000522959.5
ENST00000523114.5
ENST00000523460.5
ENST00000547204.5
ENST00000549047.5
CDS GCA 72 bp AGGTCCCCCTCCAGGGTCCTCCCTCACGCGCCACCATaGGGCCCTGCCGGGCCGGGCTGGTGGGAACAGGCC +
Preference number: 6 (lower is better)
Translates to: RSPSRVLPHAPP*GPAGPGWWEQA
Trigger: GGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGGGAGGACCCTGGAGGGGGACCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 72 bp GGCCCTGCCGGGCCGGGCTGGTGGGAACAGGCCCTGTaGAGCCTGTGCCTGAGGCCAACGCCGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: GPAGPGWWEQAL*SLCLRPTPAAA
Trigger: GGCTGCAGCCGGCGTTGGCCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 72 bp CACGCGCCACCATGCGGCCCTGCCGGGCCGGGCTGGTaGGAACAGGCCCTGTGGAGCCTGTGCCTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: HAPPCGPAGPGW*EQALWSLCLRP
Trigger: TGGCCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 72 bp CCTCACGCGCCACCATGCGGCCCTGCCGGGCCGGGCTaGTGGGAACAGGCCCTGTGGAGCCTGTGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: PHAPPCGPAGPG*WEQALWSLCLR
Trigger: CCTCAGGCACAGGCTCCACAGGGCCTGTTCCCACCAGCCCGGCCCGGCAGGGCCGCATGGTGGCGCGTGAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS TCA 72 bp TCAGGCCAGGGCCGAGGTAGGGCCGCCGCACTGCAATaGGGATGCGCCCGGTCGCCCACCAGCCGCCACCAG +
Preference number: 6 (lower is better)
Translates to: SGQGRGRAAALQ*GCARSPTSRHQ
Trigger: CTGGTGGCGGCTGGTGGGCGACCGGGCGCATCCTCATTGCAGTGCGGCGGCCCTACCTCGGCCCTGGCCTGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370283.9
ENST00000519273.6
ENST00000519604.5
ENST00000520485.5
ENST00000522959.5
ENST00000523114.5
ENST00000523460.5
ENST00000547204.5
ENST00000549047.5
CDS TCA 72 bp GGGAGGCCCCAAGGGAAGCAGCCCTACCCACCAGACTaGACCCTGTGGGCCTGGCCCACGCCAGGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: GRPQGKQPYPPD*TLWAWPTPGVP
Trigger: GGGGACGCCTGGCGTGGGCCAGGCCCACAGGGTTCAGTCTGGTGGGTAGGGCTGCTTCCCTTGGGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS TCA 72 bp CGCAGGCACAGCACCAACCACAGCGGCCCTTCTGGCTaGGCGGCCACCGCCAGCGTGGGCCATCTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: RRHSTNHSGPSG*AATASVGHLPS
Trigger: GCTTGGCAGATGGCCCACGCTGGCGGTGGCCGCTCAGCCAGAAGGGCCGCTGTGGTTGGTGCTGTGCCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp CCGCCAGCGTGGGCCATCTGCCAAGCCGGGCAGTCCTaGTCCCAACAAGGTGGCCGGCTGCAGTGGCCACAC +
Preference number: 6 (lower is better)
Translates to: PPAWAICQAGQS*SQQGGRLQWPH
Trigger: GTGTGGCCACTGCAGCCGGCCACCTTGTTGGGAGCAGGACTGCCCGGCTTGGCAGATGGCCCACGCTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp CGCCCCGGGAGGCGACGTGCGTGGGCAGGGACCCTCTaGACTCCCGTAACCGGTGGGAGATTCCAGATCCGG +
Preference number: 6 (lower is better)
Translates to: RPGRRRAWAGTL*TPVTGGRFQIR
Trigger: CCGGATCTGGAATCTCCCACCGGTTACGGGAGTCCAGAGGGTCCCTGCCCACGCACGTCGCCTCCCGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522403.6
CDS GCA 72 bp AGACGCCCCGGCCACTCTGCAGCGGTGCCAGGTGTGTaGGGGACATGGCAGCGAGGACAGCCTCGTGCACAG +
Preference number: 6 (lower is better)
Translates to: RRPGHSAAVPGV*GTWQRGQPRAQ
Trigger: CTGTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000395285.3
ENST00000518691.1
CDS GCA 72 bp CTTCTGGCTGAGCGGCCACCGCCAGCGTGGGCCATCTaGCAAGCCGGGCAGTCCTGCTCCCAACAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LLAERPPPAWAI*QAGQSCSQQGG
Trigger: GCCACCTTGTTGGGAGCAGGACTGCCCGGCTTGGCAGATGGCCCACGCTGGCGGTGGCCGCTCAGCCAGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 72 bp AGGGGGTGGAAGCCCCACCGGGCTTCAGAGGCCACCTaGCTGGGATGTGTCCAGGCCGAGTCCTGGGTCCGA +
Preference number: 6 (lower is better)
Translates to: RGWKPHRASEAT*LGCVQAESWVR
Trigger: TCGGACCCAGGACTCGGCCTGGACACATCCCAGTCAGGTGGCCTCTGAAGCCCGGTGGGGCTTCCACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522403.6
ENST00000550188.1
CDS GCA 72 bp TGGACAGACACAGACGCCCCGGCCACTCTGCAGCGGTaGCAGGTGTGTGCGGGACATGGCAGCGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: WTDTDAPATLQR*QVCAGHGSEDS
Trigger: GCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS GCA 72 bp CGTACAGACACAGACGCCCCGGCCACTCTGCAGCGGTaGCAGGTGTGTGCGGGACATGGCAGCGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: RTDTDAPATLQR*QVCAGHGSEDS
Trigger: GCTGTCCTCGCTGCCATGTCCCGCACACACCTGGCACCGCTGCAGAGTGGCCGGGGCGTCTGTGTCTGTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395285.3
ENST00000518691.1
CDS CCA 72 bp GCACCGCGCATGCCTGGGTCCCACACCCACTGCACATaGGAGGCCCCAAGGGAAGCAGCCCTACCCACCAGA +
Preference number: 6 (lower is better)
Translates to: APRMPGSHTHCT*EAPREAALPTR
Trigger: TCTGGTGGGTAGGGCTGCTTCCCTTGGGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS CAA 90 bp TGCCCCGACTGGGGGAAGCCCTGGCCAGAGCAAAGAGACGCTCCGTaGCCTCGAAGTGCAGACGCGTCCAGTGTGCCGCAGGCACAGCAC +
Preference number: 6 (lower is better)
Translates to: CPDWGKPWPEQRDAP*PRSADASSVPQAQH
Trigger: GTGCTGTGCCTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCCAGTCGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp TGCCAAGCTGGGCTGAGGGCTGCACGGGGCACACCCTaGTCTCACGCCCAGGGCCGTGGAATATGGAGACTG +
Preference number: 6 (lower is better)
Translates to: CQAGLRAARGTP*SHAQGRGIWRL
Trigger: CAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCAGCCCTCAGCCCAGCTTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS GCA 72 bp GGGGGAAGCCCTGGCCAGAGCAAAGAGACGCTCCGTTaGCTCGAAGTGCAGACGCGTCCAGTGTGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: GGSPGQSKETLR*LEVQTRPVCRR
Trigger: CCTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp GCTGGGACTCACTGCAATCAGACCCTGCACCGCGCATaGCTGGGTCCCACACCCACTGCACATGGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: AGTHCNQTLHRA*LGPTPTAHGRP
Trigger: GGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGCAGGGTCTGATTGCAGTGAGTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS CCA 72 bp GGCCAGAGACTCGGTGCACCATGGACGGCAGCGTCCTaGGCTGAGGTGGGGTCCAGTTCTGGGCAGGTGATG +
Preference number: 6 (lower is better)
Translates to: GQRLGAPWTAAS*AEVGSSSGQVM
Trigger: CATCACCTGCCCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS CCA 72 bp GGCCTGAGGCCACACTGCCCCGACTGGGGGAAGCCCTaGCCAGAGCAAAGAGACGCTCCGTTGCCTCGAAGT +
Preference number: 6 (lower is better)
Translates to: GLRPHCPDWGKP*PEQRDAPLPRS
Trigger: ACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCCAGTCGGGGCAGTGTGGCCTCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp GGTGGAAGCCCCACCGGGCTTCAGAGGCCACCTGACTaGGATGTGTCCAGGCCGAGTCCTGGGTCCGAAGGA +
Preference number: 6 (lower is better)
Translates to: GGSPTGLQRPPD*DVSRPSPGSEG
Trigger: TCCTTCGGACCCAGGACTCGGCCTGGACACATCCCAGTCAGGTGGCCTCTGAAGCCCGGTGGGGCTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522403.6
ENST00000550188.1
CDS CAA 72 bp CCTCTAGAAGGCGGAGACCGCGGCCCCCACCAATTCTaGCAGGAAGGTCCCCCTCCAGGGTCCTCCCTCACG +
Preference number: 6 (lower is better)
Translates to: PLEGGDRGPHQF*QEGPPPGSSLT
Trigger: CGTGAGGGAGGACCCTGGAGGGGGACCTTCCTGCAAGAATTGGTGGGGGCCGCGGTCTCCGCCTTCTAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS TCA 72 bp GAGACTCGGTGCACCATGGACGGCAGCGTCCTGGGCTaGGGTGGGGTCCAGTTCTGGGCAGGTGATGACTCC +
Preference number: 6 (lower is better)
Translates to: ETRCTMDGSVLG*GGVQFWAGDDS
Trigger: GGAGTCATCACCTGCCCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCATGGTGCACCGAGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS GCA 72 bp ACGCTCCGTTGCCTCGAAGTGCAGACGCGTCCAGTGTaGCGCAGGCACAGCACCAACCACAGCGGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: TLRCLEVQTRPV*RRHSTNHSGPS
Trigger: AGAAGGGCCGCTGTGGTTGGTGCTGTGCCTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp AAAGCCTTGTCCGAGGAGGCGGTCACACTCTGCGGCTaGCCAGAGACTCGGTGCACCATGGACGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: KALSEEAVTLCG*PETRCTMDGSV
Trigger: GACGCTGCCGTCCATGGTGCACCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS CCA 72 bp TCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTGCAACGCCTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SCAGLRTFSFRL*PSSDACNASPS
Trigger: GGAAGGAGAGGCGTTGCAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468975.6
ENST00000520022.2
CDS CCA 72 bp TGCACGGGGCACACCCTGCTCTCACGCCCAGGGCCGTaGAATATGGAGACTGGCTTCGACTGTGCCCGCGTA +
Preference number: 6 (lower is better)
Translates to: CTGHTLLSRPGP*NMETGFDCARV
Trigger: TACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCCCCGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 72 bp GGACTCACTGCAATCAGACCCTGCACCGCGCATGCCTaGGTCCCACACCCACTGCACATGGGAGGCCCCAAG +
Preference number: 6 (lower is better)
Translates to: GLTAIRPCTAHA*VPHPLHMGGPK
Trigger: CTTGGGGCCTCCCATGTGCAGTGGGTGTGGGACCCAGGCATGCGCGGTGCAGGGTCTGATTGCAGTGAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS CAA 72 bp TGGGGGAAGCCCTGGCCAGAGCAAAGAGACGCTCCGTaGCCTCGAAGTGCAGACGCGTCCAGTGTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: WGKPWPEQRDAP*PRSADASSVPQ
Trigger: CTGCGGCACACTGGACGCGTCTGCACTTCGAGGCAACGGAGCGTCTCTTTGCTCTGGCCAGGGCTTCCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 72 bp AATGCACGCCCCAAATGGCCCGCAGAGCAGTGGGACTaGTGGCAGCAAAGACGGCGCTGGCACTTGGACGCC +
Preference number: 6 (lower is better)
Translates to: NARPKWPAEQWD*WQQRRRWHLDA
Trigger: GGCGTCCAAGTGCCAGCGCCGTCTTTGCTGCCATCAGTCCCACTGCTCTGCGGGCCATTTGGGGCGTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370275.8
CDS TCA 72 bp GTGATTCTGAACCCGAGGACAGCCAGATCACAGCCCTaGCCACCAAGTGGGAACCGCGGGGCCCCTACCCAC +
Preference number: 6 (lower is better)
Translates to: VILNPRTARSQP*PPSGNRGAPTH
Trigger: GTGGGTAGGGGCCCCGCGGTTCCCACTTGGTGGTCAGGGCTGTGATCTGGCTGTCCTCGGGTTCAGAATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp CCCAGGGCCGTGGAATATGGAGACTGGCTTCGACTGTaGCCGCGTATCTGGCAGGCTCCCTACCTTGGACGC +
Preference number: 6 (lower is better)
Translates to: PRAVEYGDWLRL*PRIWQAPYLGR
Trigger: GCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 72 bp GGCACACCCTGCTCTCACGCCCAGGGCCGTGGAATATaGAGACTGGCTTCGACTGTGCCCGCGTATCTGGCA +
Preference number: 6 (lower is better)
Translates to: GTPCSHAQGRGI*RLASTVPAYLA
Trigger: TGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTCCACGGCCCTGGGCGTGAGAGCAGGGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CCA 72 bp ATCCTCCCCTTTGCACTGCGTTCAAGGGAGCGCAGGTaGCCAGGAAACCCTGCTCAGCAGCTCTGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: ILPFALRSRERR*PGNPAQQLCAQ
Trigger: CTGGGCGCAGAGCTGCTGAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CAA 90 bp AGTGGCCACACACCGGTACCAGCTACCAGTGAACAGGAAACGAGTTaGGCCCTGCAGGCCCTGAGTGGGTCCATGAGGCAGCCACCCGGG +
Preference number: 6 (lower is better)
Translates to: SGHTPVPATSEQETS*ALQALSGSMRQPPG
Trigger: CCCGGGTGGCTGCCTCATGGACCCACTCAGGGCCTGCAGGGCCAAACTCGTTTCCTGTTCACTGGTAGCTGGTACCGGTGTGTGGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp TCTTCAAAAGCCTTGTCCGAGGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCGGTGCACCATGGACGGC +
Preference number: 6 (lower is better)
Translates to: SSKALSEEAVTL*GWPETRCTMDG
Trigger: GCCGTCCATGGTGCACCGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTTTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000353546.7
ENST00000370275.8
ENST00000370283.9
ENST00000518601.6
ENST00000519531.5
ENST00000519604.5
ENST00000522403.6
ENST00000524192.6
ENST00000547204.5
ENST00000549047.5
CDS GCA 72 bp AGGTGTGTGCGGGACATGGCAGCGAGGACAGCCTCGTaGACAGACCTCAAGAGCTCCCACCACATGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RCVRDMAARTAS*TDLKSSHHMLG
Trigger: CCCAAGCATGTGGTGGGAGCTCTTGAGGTCTGTGCACGAGGCTGTCCTCGCTGCCATGTCCCGCACACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370275.8
ENST00000395285.3
ENST00000518691.1
CDS CCA 72 bp GAGAAAGGAGCTCAGCCTCTCCTGATCCTGGGTCAGTaGAGTCGAGGCCACACGGCCACCTGGGGATGTGGT +
Preference number: 6 (lower is better)
Translates to: EKGAQPLLILGQ*SRGHTATWGCG
Trigger: ACCACATCCCCAGGTGGCCGTGTGGCCTCGACTCCACTGACCCAGGATCAGGAGAGGCTGAGCTCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468975.6
ENST00000518794.6
ENST00000520022.2
CDS CCA 72 bp TCCTGCGCAGGCTTGAGGACGTTCTCGTTCAGGCTGTaGCCCAGCTCGGACGCCTGTAGGAAGGGAAGTCAC +
Preference number: 6 (lower is better)
Translates to: SCAGLRTFSFRL*PSSDACRKGSH
Trigger: GTGACTTCCCTTCCTACAGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518691.1
ENST00000518794.6
CDS CCA 72 bp CCCCTTCTACGCTGGGACCCCTCAGCTCTGAGCATGTaGCCTGAGAAGAGGGAACCAGGCAGCTTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: PLLRWDPSALSM*PEKREPGSFRC
Trigger: GCACCTGAAGCTGCCTGGTTCCCTCTTCTCAGGCCACATGCTCAGAGCTGAGGGGTCCCAGCGTAGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp CCCGAGGACAGCCAGATCACAGCCCTGACCACCAAGTaGGAACCGCGGGGCCCCTACCCACATCCTAAAGAA +
Preference number: 6 (lower is better)
Translates to: PEDSQITALTTK*EPRGPYPHPKE
Trigger: TTCTTTAGGATGTGGGTAGGGGCCCCGCGGTTCCCACTTGGTGGTCAGGGCTGTGATCTGGCTGTCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp AAAGCCTTGTCCGAGGAGGCGGTCACACTCTGCGGCTaGCCAGAGACTCTTATCCCTAAAGAGGGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: KALSEEAVTLCG*PETLIPKEGRG
Trigger: GCCGCGGCCCTCTTTAGGGATAAGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000520485.5
CDS TCA 72 bp AGGAACACCCCCTTCTACGCTGGGACCCCTCAGCTCTaGGCATGTGGCCTGAGAAGAGGGAACCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: RNTPFYAGTPQL*ACGLRRGNQAA
Trigger: AGCTGCCTGGTTCCCTCTTCTCAGGCCACATGCTCAGAGCTGAGGGGTCCCAGCGTAGAAGGGGGTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CCA 72 bp GTGGTGACGTCCCGCCATCCCTTACTACCGACTCCCTaGACCTGGAAGGAGACGGGAAGAGAGGTTAGGCAG +
Preference number: 6 (lower is better)
Translates to: VVTSRHPLLPTP*TWKETGREVRQ
Trigger: CTGCCTAACCTCTCTTCCCGTCTCCTTCCAGGTCCAGGGAGTCGGTAGTAAGGGATGGCGGGACGTCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395285.3
CDS TCA 72 bp AATGCACGCCCCAAATGGCCCGCAGAGCAGTGGGACTaGTGGCAGCAAAGACGGCGCTGGCACTTACTTACC +
Preference number: 6 (lower is better)
Translates to: NARPKWPAEQWD*WQQRRRWHLLT
Trigger: GGTAAGTAAGTGCCAGCGCCGTCTTTGCTGCCATCAGTCCCACTGCTCTGCGGGCCATTTGGGGCGTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395285.3
ENST00000518691.1
CDS GCA 72 bp CTGCCCGCACCTTGGCTCCATGCTGCCAAGTCAAGGTaGTGGCGTGGAAACAGGCACATGTGGAACACCACA +
Preference number: 6 (lower is better)
Translates to: LPAPWLHAAKSR*WRGNRHMWNTT
Trigger: TGTGGTGTTCCACATGTGCCTGTTTCCACGCCAGCACCTTGACTTGGCAGCATGGAGCCAAGGTGCGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395285.3
CDS CCA 72 bp TCGACTGTGCCCGCGTATCTGGCAGGCTCCCTACCTTaGACGCCAACTGAGAGACCCCACTGGAGACATCAT +
Preference number: 6 (lower is better)
Translates to: STVPAYLAGSLP*TPTERPHWRHH
Trigger: ATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CAA 72 bp ACACCGGTACCAGCTACCAGTGAACAGGAAACGAGTTaGGCCCTGCAGGCCCTGAGTGGGTCCATGAGGCAG +
Preference number: 6 (lower is better)
Translates to: TPVPATSEQETS*ALQALSGSMRQ
Trigger: CTGCCTCATGGACCCACTCAGGGCCTGCAGGGCCAAACTCGTTTCCTGTTCACTGGTAGCTGGTACCGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS CAA 90 bp AGGCCGGAAAGGGAAGAACTCGTCACAGAGCAAAGATCCTCCCCTTaGCACTGCGTTCAAGGGAGCGCAGGTGGCCAGGAAACCCTGCTC +
Preference number: 6 (lower is better)
Translates to: RPEREELVTEQRSSP*HCVQGSAGGQETLL
Trigger: GAGCAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTCTTCCCTTTCCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CAA 90 bp GGGCCTGGCCCACGCCAGGCGTCCCCAGCTCTCAAGTCCTTACCCTaGATAGGAGCCGAGGTCATCATTCAGCCAGTCTTCAAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: GPGPRQASPALKSLP*IGAEVIIQPVFKSL
Trigger: AAGGCTTTTGAAGACTGGCTGAATGATGACCTCGGCTCCTATCAAGGGTAAGGACTTGAGAGCTGGGGACGCCTGGCGTGGGCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS TCA 72 bp GCACAGCTCCACGCCTGCAGTCCTGAGCTTTCATGGTaGGCCTCACATGGGTACTGCCTCCTGGGTGTGATT +
Preference number: 6 (lower is better)
Translates to: AQLHACSPELSW*ASHGYCLLGVI
Trigger: AATCACACCCAGGAGGCAGTACCCATGTGAGGCTCACCATGAAAGCTCAGGACTGCAGGCGTGGAGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 72 bp GTCCTAGAGCCATGCACAGCTCCACGCCTGCAGTCCTaGGCTTTCATGGTGAGCCTCACATGGGTACTGCCT +
Preference number: 6 (lower is better)
Translates to: VLEPCTAPRLQS*AFMVSLTWVLP
Trigger: AGGCAGTACCCATGTGAGGCTCACCATGAAAGCTCAGGACTGCAGGCGTGGAGCTGTGCATGGCTCTAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS GCA 72 bp GAACTCGTCACAGAGCAAAGATCCTCCCCTTTGCACTaGGTTCAAGGGAGCGCAGGTGGCCAGGAAACCCTG +
Preference number: 6 (lower is better)
Translates to: ELVTEQRSSPLH*VQGSAGGQETL
Trigger: CAGGGTTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS CCA 72 bp GAATATGGAGACTGGCTTCGACTGTGCCCGCGTATCTaGCAGGCTCCCTACCTTGGACGCCAACTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: EYGDWLRLCPRI*QAPYLGRQLRD
Trigger: GTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCGGGCACAGTCGAAGCCAGTCTCCATATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS CAA 72 bp CCACGCCAGGCGTCCCCAGCTCTCAAGTCCTTACCCTaGATAGGAGCCGAGGTCATCATTCAGCCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: PRQASPALKSLP*IGAEVIIQPVF
Trigger: GAAGACTGGCTGAATGATGACCTCGGCTCCTATCAAGGGTAAGGACTTGAGAGCTGGGGACGCCTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524192.6
CDS TCA 72 bp TGCTCACTCCTGACCGCAGGACTTGGACCCCCAGCATaGCTCATTCAGGCGGATACCGTCATCAAACTGAGC +
Preference number: 6 (lower is better)
Translates to: CSLLTAGLGPPA*LIQADTVIKLS
Trigger: GCTCAGTTTGATGACGGTATCCGCCTGAATGAGTCATGCTGGGGGTCCAAGTCCTGCGGTCAGGAGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS TCA 72 bp GAGTGTCCAGGAACCACAGATCATGAGGCAGACATCTaGATGCTCACTCCTGACCGCAGGACTTGGACCCCC +
Preference number: 6 (lower is better)
Translates to: ECPGTTDHEADI*MLTPDRRTWTP
Trigger: GGGGGTCCAAGTCCTGCGGTCAGGAGTGAGCATTCAGATGTCTGCCTCATGATCTGTGGTTCCTGGACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS TCA 72 bp ACAAACGGCAGGGCAGCCCCACACCATGGGCAAGAGTaGATCGGGCCCATCTCTACCTTATCCCTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: TNGRAAPHHGQE*IGPISTLSLKR
Trigger: CCTCTTTAGGGATAAGGTAGAGATGGGCCCGATTCACTCTTGCCCATGGTGTGGGGCTGCCCTGCCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522959.5
CDS GCA 72 bp TCTTCAAAAGCCTTGTCCGAGGAGGCGGTCACACTCTaGGGCTGGCCAGAGACTCTTATCCCTAAAGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSKALSEEAVTL*GWPETLIPKEG
Trigger: GCCCTCTTTAGGGATAAGAGTCTCTGGCCAGCCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTTTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519273.6
ENST00000520485.5
CDS GCA 72 bp GGGAAGAACTCGTCACAGAGCAAAGATCCTCCCCTTTaGACTGCGTTCAAGGGAGCGCAGGTGGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: GKNSSQSKDPPL*TAFKGAQVARK
Trigger: TTTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS GCA 72 bp GTCCAGGAACCACAGATCATGAGGCAGACATCTGAATaGTCACTCCTGACCGCAGGACTTGGACCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: VQEPQIMRQTSE*SLLTAGLGPPA
Trigger: TGCTGGGGGTCCAAGTCCTGCGGTCAGGAGTGAGCATTCAGATGTCTGCCTCATGATCTGTGGTTCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS CAA 72 bp AGGGAAGAACTCGTCACAGAGCAAAGATCCTCCCCTTaGCACTGCGTTCAAGGGAGCGCAGGTGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: REELVTEQRSSP*HCVQGSAGGQE
Trigger: TTCCTGGCCACCTGCGCTCCCTTGAACGCAGTGCAAAGGGGAGGATCTTTGCTCTGTGACGAGTTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518794.6
CDS TCA 72 bp GAGAAGAGGGAACCAGGCAGCTTCAGGTGCTGCACGTaGCGTCAGACTCAGGATAGTTTCAGATGCACCAGG +
Preference number: 6 (lower is better)
Translates to: EKREPGSFRCCT*RQTQDSFRCTR
Trigger: CCTGGTGCATCTGAAACTATCCTGAGTCTGACGTCACGTGCAGCACCTGAAGCTGCCTGGTTCCCTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 72 bp CAGCATGACTCATTCAGGCGGATACCGTCATCAAACTaGGCATCCACCTATACAGCCGACTGGAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: QHDSFRRIPSSN*ASTYTADWREG
Trigger: CCCCTCCCTCCAGTCGGCTGTATAGGTGGATGCTCAGTTTGATGACGGTATCCGCCTGAATGAGTCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523114.5
CDS TCA 72 bp AAGACTCCGTCGAGTACAGGGAGGACATGGCGTTGTTaGGGAAGTCATCTTCTTTCTTCTGAGGCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: KTPSSTGRTWRC*GSHLLSSEAVA
Trigger: CGCCACCGCCTCAGAAGAAAGAAGATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGACGGAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518601.6
CDS CAA 72 bp GTGCAGAAGCTTCTCCTCTGTTACCTTCTGACTCGCTaGGGATCCAAACTTTGTAGCGCCCTCCTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: VQKLLLCYLLTR*GSKLCSALLGC
Trigger: GCAGCCAAGGAGGGCGCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGGTAACAGAGGAGAAGCTTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519531.5
CDS TCA 72 bp AAGATAAGAGCAGAGGGAGAAGTGACAGTTAGTGGCTaGCCGGGCCGCAGTGGGCCAAGTTGTTTCCATATC +
Preference number: 6 (lower is better)
Translates to: KIRAEGEVTVSG*PGRSGPSCFHI
Trigger: GATATGGAAACAACTTGGCCCACTGCGGCCCGGTCAGCCACTAACTGTCACTTCTCCCTCTGCTCTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395285.3
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS TCA 72 bp CGCGTATCTGGCAGGCTCCCTACCTTGGACGCCAACTaGGAGACCCCACTGGAGACATCATCAAAAATCTTT +
Preference number: 6 (lower is better)
Translates to: RVSGRLPTLDAN*ETPLETSSKIF
Trigger: AAAGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCAAGGTAGGGAGCCTGCCAGATACGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518618.2
ENST00000518691.1
ENST00000520022.2
CDS GCA 72 bp CTGGAGACATCATCAAAAATCTTTCCCTCCTTCACCTaGACGGATGAAGACAGCGGCATTAATGGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LETSSKIFPSFT*TDEDSGINGGG
Trigger: CCCGCCCCCATTAATGCCGCTGTCTTCATCCGTGCAGGTGAAGGAGGGAAAGATTTTTGATGATGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518618.2
CDS CAA 90 bp GCATTCCCACCAGCTTTCATCTTCTCAAGCTCAATGTCCTTCCACTaGTCCATAGTAACAGAGCGCACAAAGGTTGTTCTCATCCTGCAC +
Preference number: 6 (lower is better)
Translates to: AFPPAFIFSSSMSFH*SIVTERTKVVLILH
Trigger: GTGCAGGATGAGAACAACCTTTGTGCGCTCTGTTACTATGGACAAGTGGAAGGACATTGAGCTTGAGAAGATGAAAGCTGGTGGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518601.6
ENST00000519604.5
ENST00000547204.5
ENST00000549047.5