Pregenerated sensors for ARF5 (Homo sapiens)
Ensembl gene IDs: ENSG00000004059Ensembl transcript IDs: ENST00000000233.10, ENST00000463733.5, ENST00000467281.5, ENST00000489673.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTaGCCAGAGAGCAAGGCTCCAGGCTCCAACAACAGAGAGAACATG | + |
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Preference number: 1 (lower is better) Translates to: SPFHRSQQAGEWTPL*PESKAPGSNNRENM Trigger: CATGTTCTCTCTGTTGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCAGGAAAGGGCACTGCCTaGGGAGTCCGGGAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PSIGPSRQESGPLCAQRAGKGTA*GVRESG Trigger: ACCAGACTCCCGGACTCCTCAGGCAGTGCCCTTTCC...TGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCAAGGAGCAGAGGCCTGTaGCTATGGGGGAGGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PSIGPSRQESGPLCAQRARSRGL*LWGRKS Trigger: ACTTTTCCTCCCCCATAGCCACAGGCCTCTGCTCCT...TGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR GCA 90 bp | ATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCCCTGGTCATCCCGGGGATaGACGCAGGAGCTTCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: ITQDPVPHYSTTRSPHLPWSSRG*TQELPG Trigger: GCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCA...GGGAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR CCA 90 bp | TTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCAGGAGTCCGGGAGTCTaGTCATCCCGGGGATGCACG | + |
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Preference number: 2 (lower is better) Translates to: LLLKIQCHIIAPPEALTFRSPGV*SSRGCT Trigger: CGTGCATCCCCGGGATGACCAGACTCCCGGACTCCT...GAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTGAGTGGACCCCTCTGTaGCCAGAGAGCAAGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SKFITQDPVPHYSTTRSPEWTPL*PESKAP Trigger: TGGAGCCTTGCTCTCTGGGCACAGAGGGGTCCACTC...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCGGAAACCCAGATCCCTaGTCCTCCTCTGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TANLLLKIQCHIIAPPEAGNPDP*SSSGRG Trigger: CCCTCTTCCAGAGGAGGAGCAGGGATCTGGGTTTCC...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR GCA 72 bp | TGCCTGAGGAGTCCGGGAGTCTGGTCATCCCGGGGATaGACGCAGGAGCTTCCGGGCATCAGGGGCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: CLRSPGVWSSRG*TQELPGIRGLP Trigger: GGGCAGGCCCCTGATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCTCAGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| 3UTR GCA 72 bp | CATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTaGCCAGAGAGCAAGGCTCCAGGCTCCAACAACAGA | + |
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Preference number: 3 (lower is better) Translates to: HRSQQAGEWTPL*PESKAPGSNNR Trigger: TCTGTTGTTGGAGCCTGGAGCCTTGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | CATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCAAGGCTAGAGCGCGGACACGGTaGGGCCCATGGCGGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: HRSQQAGEWTPLCPESKARARTR*GPWRGP Trigger: CGGGCCCCGCCATGGGCCTCACCGTGTCCGCGCTCT...AGCCTTGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | CGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAGGGGCCAGGAGTCCGGGAGTCTaGTCATCCCGGGGATGCACG | + |
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Preference number: 4 (lower is better) Translates to: RESGHPGDARRSFRASGARSPGV*SSRGCT Trigger: CGTGCATCCCCGGGATGACCAGACTCCCGGACTCCT...GGCCCCTGATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | GAGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATGGGAGGAAAGGGCACTaGCTGAGGAGTCCGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: EESGSLVIPGMHAGASGHGRKGH*LRSPGV Trigger: GACTCCCGGACTCCTCAGGCAGTGCCCTTTCCTCCC...ATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCGTGCGGCTGCGTAAGTaGTGTAGCCCCAGCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RSPGVWSSRGCTQELPGIVRLRK*CSPSLS Trigger: TGACAAGCTGGGGCTACAGCACTTACGCAGCCGCAC...GATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAAATACCAGCAGCACTaGATCCCGCAGCTCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSPGVWSSRGCTQELPGIKYQQH*IPQLVL Trigger: GAGGACGAGCTGCGGGATGCAGTGCTGCTGGTATTT...GATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | CGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAGGGGCCTCATCAGCAGATTCTTaGACCCGCTCCCGGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: RESGHPGDARRSFRASGASSADS*TRSRSL Trigger: TAATGACCGGGAGCGGGTCCAAGAATCTGCTGATGA...GGCCCCTGATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | GAGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATTGTCCACCACAAAGATaGGGCCCTGAGTGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EESGSLVIPGMHAGASGHCPPQR*GPECSG Trigger: TCCAGAACACTCAGGGCCTCATCTTTGTGGTGGACA...ATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCGCGTTGGGCATGTCCTaGTTGTTGGCAAATACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSPGVWSSRGCTQELPGIALGMS*LLANTS Trigger: GCTGGTATTTGCCAACAAGCAGGACATGCCCAACGC...GATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | CATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCAAGGCTCATCGTACAGACCTGTaGCTTGGGTGGCACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HRSQQAGEWTPLCPESKAHRTDL*LGWHRW Trigger: CCACCTGTGCCACCCAAGGCACAGGTCTGTACGATG...AGCCTTGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | CCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCATGGTTGGGATGGTGGTaGCAATCTCCCCCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: PSIGPSRQESGPLCAQRAWLGWW*QSPPTS Trigger: TGAAGTTGGGGGAGATTGTCACCACCATCCCAACCA...TGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | ATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCCCGGAAAGGGCACTGCCTaGGGAGTCCGGGAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ITQDPVPHYSTTRSPHLPGKGTA*GVRESG Trigger: ACCAGACTCCCGGACTCCTCAGGCAGTGCCCTTTCC...GGGAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCCCCTTGGGTGGCACAGGTaGCCTGGACATACCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: ITQDPVPHYSTTRSPHLPLGWHR*PGHTTC Trigger: GCACGTGGTATGTCCAGGCCACCTGTGCCACCCAAG...GGGAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCGGGCATCAGGGGCCTaGCCCTGGCTGGTTAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPRASGA*PWLVSA Trigger: AGCGCTAACCAGCCAGGGGCAGGCCCCTGATGCCCG...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCCCAGAGGCCTGTGGCTATaGGGGAGGAAAAGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ITQDPVPHYSTTRSPHLPRGLWL*GRKSGR Trigger: CCTCCCACTTTTCCTCCCCCATAGCCACAGGCCTCT...GGGAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | TTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCTACAGACCTGTGCCTTaGGTGGCACAGGTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLKIQCHIIAPPEALTFYRPVP*VAQVAW Trigger: CCAGGCCACCTGTGCCACCCAAGGCACAGGTCTGTA...GAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCGCTCGCTCACGGGCATaGCGTTGGGCATGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEAARSRA*RWACPA Trigger: AGCAGGACATGCCCAACGCCATGCCCGTGAGCGAGC...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTGTGGCACAGGTGGCCTaGACATACCACGTGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPVAQVA*TYHVRL Trigger: CAGCCGCACGTGGTATGTCCAGGCCACCTGTGCCAC...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTGGCTGGTTAGCGCTTTaGCAGCTCGTGGGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPGWLAL*QLVGQP Trigger: TGGCTGTCCCACGAGCTGTCAAAGCGCTAACCAGCC...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCGACCTGTGCCTTGGGTaGCACAGGTGGCCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEADLCLG*HRWPGH Trigger: ATGTCCAGGCCACCTGTGCCACCCAAGGCACAGGTC...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCTCAGGGGCCTGCCCCTaGCTGGTTAGCGCTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEASGACP*LVSALT Trigger: TGTCAAAGCGCTAACCAGCCAGGGGCAGGCCCCTGA...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | ATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCCCCCACTGTTTCTACATTaGAGCCTATGGTTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ITQDPVPHYSTTRSPHLPPLFLH*SLWLGW Trigger: CCATCCCAACCATAGGCTTCAATGTAGAAACAGTGG...GGGAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCATACCACGTGCGGCTaGGTAAGTGCTGTAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPHTTCG*VSAVAP Trigger: TGGGGCTACAGCACTTACGCAGCCGCACGTGGTATG...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCGCTTTGACAGCTCGTaGGACAGCCAGTCCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEARFDSS*DSQSRP Trigger: TGGTCTGGACTGGCTGTCCCACGAGCTGTCAAAGCG...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCAGGAGCAGAGGCCTGTaGCTATGGGGGAGGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEARSRGL*LWGRKS Trigger: ACTTTTCCTCCCCCATAGCCACAGGCCTCTGCTCCT...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR GCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTACAGGATTGTGGTCTTaGCAGCCGCATCCAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPTGLWS*QPHPSQ Trigger: TTGGCTTGGATGCGGCTGGCAAGACCACAATCCTGT...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR TCA 90 bp | ACAGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCATCCAAGCCAACCATaGGAATCCGCATCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TANLLLKIQCHIIAPPEAHPSQP*ESASAS Trigger: AGAAGCAGATGCGGATTCTCATGGTTGGCTTGGATG...GGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CCA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTTCCTGCAGCATCTTCTaGAGTTCATCAGCAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: SKFITQDPVPHYSTTRSPSCSIF*SSSADS Trigger: AGAATCTGCTGATGAACTCCAGAAGATGCTGCAGGA...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS GCA 90 bp | GGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAGGGGCCTaGCCCTGGCTGGTTAGCGCTTTGACAGCTCGTGGGACAGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GHPGDARRSFRASGA*PWLVSALTARGTAS Trigger: ACTGGCTGTCCCACGAGCTGTCAAAGCGCTAACCAGCCAGGGGCAGGCCCCTGATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000000233.10 ENST00000463733.5 |
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| CDS-3UTR CAA 90 bp | CGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAGGGGCCTGCTGTAGCCCCAGCTaGTCAGTCAGCTCGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: RESGHPGDARRSFRASGACCSPS*SVSSLT Trigger: CGTGAGCGAGCTGACTGACAAGCTGGGGCTACAGCA...GGCCCCTGATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS GCA 90 bp | TCCGGGCCGCGCGCTCGATCTGCCTCACCCATGAGAATCCGCATCTaGTTCTTCCCGAAGATCCGCGAAAAGAGCGCGGACACGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SGPRARSASPMRIRI*FFPKIREKSADTVR Trigger: CCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCGGGAAGAAGCAGATGCGGATTCTCATGGGTGAGGCAGATCGAGCGCGCGGCCCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467281.5 |
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| CDS-3UTR CAA 90 bp | CCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCATGGCTGGTTAGCGCTTaGACAGCTCGTGGGACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PSIGPSRQESGPLCAQRAWLVSA*TARGTA Trigger: GGCTGTCCCACGAGCTGTCAAAGCGCTAACCAGCCA...TGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CAA 90 bp | GAGGAGTCCGGGAGTCTGGTCATCCCGGGGATGCACGCAGGAGCTTCCGGGCATTTCATCAGCAGATTCTaGGACCCGCTCCCGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: EESGSLVIPGMHAGASGHFISRF*DPLPVI Trigger: AATGACCGGGAGCGGGTCCAAGAATCTGCTGATGAA...ATGCCCGGAAGCTCCTGCGTGCATCCCCGGGATGACCAGACTCCCGGACTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CAA 90 bp | CCTTCCATAGGTCCCAGCAGGCAGGAGAGTGGACCCCTCTGTGCCCAGAGAGCATTGGGCATGTCCTGCTaGTTGGCAAATACCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSIGPSRQESGPLCAQRALGMSC*LANTSS Trigger: GCTGCTGGTATTTGCCAACAAGCAGGACATGCCCAA...TGCTCTCTGGGCACAGAGGGGTCCACTCTCCTGCCTGCTGGGACCTATGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CAA 90 bp | AGCAAATTTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCTGGAAGAGGGGGCCTaGGCCAGGAAGCCCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SKFITQDPVPHYSTTRSPLEEGA*ARKPLP Trigger: TGGAAGGGGCTTCCTGGCCAAGGCCCCCTCTTCCAG...AGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAAATTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS-3UTR CAA 90 bp | TTATTACTCAAGATCCAGTGCCACATTATAGCACCACCCGAAGCCCTCACCTTCTCCACTGTTTCTACATaGAAGCCTATGGTTGGGATG | + |
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Preference number: 5 (lower is better) Translates to: LLLKIQCHIIAPPEALTFSTVST*KPMVGM Trigger: CATCCCAACCATAGGCTTCAATGTAGAAACAGTGGA...GAAGGTGAGGGCTTCGGGTGGTGCTATAATGTGGCACTGGATCTTGAGTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000000233.10 |
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| CDS CCA 90 bp | CTCTACAGAAGTTTACAGAACTCTATAGAAGCTCTACAGGAGTCATaGCACAAACTAGAGACCCCACTGCAAAGAGGAAGTAGTTTATCC | + |
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Preference number: 5 (lower is better) Translates to: LYRSLQNSIEALQES*HKLETPLQRGSSLS Trigger: GGATAAACTACTTCCTCTTTGCAGTGGGGTCTCTAGTTTGTGCCATGACTCCTGTAGAGCTTCTATAGAGTTCTGTAAACTTCTGTAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463733.5 |
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| CDS TCA 90 bp | GGAAGTAGTTTATCCAAAGATGTGCAAGGAAATAAAGACATGTTATaGGGGCTAAATCAGGCAGCCTGGTCCCAGAATCCTGCTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: GSSLSKDVQGNKDML*GLNQAAWSQNPASK Trigger: TTTAGAAGCAGGATTCTGGGACCAGGCTGCCTGATTTAGCCCTCATAACATGTCTTTATTTCCTTGCACATCTTTGGATAAACTACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463733.5 |
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| CDS CCA 72 bp | GCACGCAGGAGCTTCCGGGCATCAGGGGCCTGCCCCTaGCTGGTTAGCGCTTTGACAGCTCGTGGGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: ARRSFRASGACP*LVSALTARGTA Trigger: GGCTGTCCCACGAGCTGTCAAAGCGCTAACCAGCCAGGGGCAGGCCCCTGATGCCCGGAAGCTCCTGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000000233.10 ENST00000463733.5 |
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| CDS GCA 72 bp | CAGGTGGGCAGGACCCCTACCGTGCGGCTGCGTAAGTaGTGTAGCCCCAGCTTGTCAGTCAGCTCGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: QVGRTPTVRLRK*CSPSLSVSSLT Trigger: CGTGAGCGAGCTGACTGACAAGCTGGGGCTACAGCACTTACGCAGCCGCACGGTAGGGGTCCTGCCCACCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489673.1 |
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| CDS CAA 72 bp | CCTACCGTGCGGCTGCGTAAGTGCTGTAGCCCCAGCTaGTCAGTCAGCTCGCTCACGGGCATGGCGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PTVRLRKCCSPS*SVSSLTGMALG Trigger: GCCCAACGCCATGCCCGTGAGCGAGCTGACTGACAAGCTGGGGCTACAGCACTTACGCAGCCGCACGGTAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489673.1 |
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| CDS CAA 72 bp | TACCACGTGCGGCTGCGTAAGTGCTGTAGCCCCAGCTaGTCAGTCAGCTCGCTCACGGGCATGGCGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: YHVRLRKCCSPS*SVSSLTGMALG Trigger: GCCCAACGCCATGCCCGTGAGCGAGCTGACTGACAAGCTGGGGCTACAGCACTTACGCAGCCGCACGTGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000000233.10 ENST00000463733.5 |
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| CDS CCA 72 bp | AGTTTACAGAACTCTATAGAAGCTCTACAGGAGTCATaGCACAAACTAGAGACCCCACTGCAAAGAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLQNSIEALQES*HKLETPLQRGS Trigger: ACTTCCTCTTTGCAGTGGGGTCTCTAGTTTGTGCCATGACTCCTGTAGAGCTTCTATAGAGTTCTGTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463733.5 |
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