Pregenerated sensors for ARF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143761Ensembl transcript IDs: ENST00000272102.10, ENST00000470670.5, ENST00000473546.1, ENST00000473949.5, ENST00000477451.5, ENST00000478336.5, ENST00000482962.5, ENST00000490705.1, ENST00000497165.5, ENST00000540651.5, ENST00000541182.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACACGGCGACCGAGGGACAGATGGGGCCCTGCGTCCCATAGGCTaGCTGAAGGTGGGTAGGGCGGCCTGCGGCATAGTGGGGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PHGDRGTDGALRPIG*LKVGRAACGIVGWL Trigger: CAGCCACCCCACTATGCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGTCCCTCGGTCGCCGTGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR CCA 90 bp | AAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTaGCCACACGGCGACCGAGGGACAGATGGGGCCCTGCGTCCCATA | + |
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Preference number: 1 (lower is better) Translates to: KVSERARVLGTTDPL*PHGDRGTDGALRPI Trigger: TATGGGACGCAGGGCCCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGGGGAACAGCTGGGCTaGCGACTGGCATCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGGEQLG*RLASRP Trigger: CGGCCTGGATGCCAGTCGCCAGCCCAGCTGTTCCCC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTGTGGGCTCCCAGCCTaGCCCCTGGGAACCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGCGLPA*PLGTVG Trigger: TCCCACGGTTCCCAGGGGCCAGGCTGGGAGCCCACA...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR TCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGTGCGATGCACACGGTaGCCAAACCACGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGVRCTR*PNHGGS Trigger: GCTGCCTCCGTGGTTTGGTCACCGTGTGCATCGCAC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGGTGGGTAGGGCGGCCTaGGGCATAGTGGGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGVGRAA*GIVGWL Trigger: CAGCCACCCCACTATGCCGCAGGCCGCCCTACCCAC...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGGGGGAACAGCTGGGCTaGCGACTGGCATCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGGEQLG*RLASRP Trigger: CGGCCTGGATGCCAGTCGCCAGCCCAGCTGTTCCCC...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGGGAACAGCTGGGCTaGCGACTGGCATCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACGEQLG*RLASRP Trigger: CGGCCTGGATGCCAGTCGCCAGCCCAGCTGTTCCCC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGATAGTGGGGTGGCTGTaGGCTCCCAGCCTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGIVGWL*APSLAP Trigger: AGGGGCCAGGCTGGGAGCCCACAGCCACCCCACTAT...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGTGCGGCATAGTGGGGTaGCTGTGGGCTCCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGCGIVG*LWAPSL Trigger: CAGGCTGGGAGCCCACAGCCACCCCACTATGCCGCA...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR TCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGTGCGATGCACACGGTaGCCAAACCACGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACVRCTR*PNHGGS Trigger: GCTGCCTCCGTGGTTTGGTCACCGTGTGCATCGCAC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTTGATCGCAGTCTGCTaGGCCACCACCACCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGLIAVC*ATTTSC Trigger: ACATGAGGTGGTGGTGGCGCAGCAGACTGCGATCAA...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR TCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCTATGGAATGCAGGGTaGCCCAAGGACAAGCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGLWNAG*PKDKRV Trigger: AACTCGCTTGTCCTTGGGTCACCCTGCATTCCATAG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCACGAGCCGCACGTTTaGCACATGAGAGTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: DGALRPIGCLKVGRAACGHEPHV*HMRVKQ Trigger: CTGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCTTGATCGCAGTCTGCTaGGCCACCACCACCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACLIAVC*ATTTSC Trigger: ACATGAGGTGGTGGTGGCGCAGCAGACTGCGATCAA...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGAATTGATCGCAGTCTaGTGCGCCACCACCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACELIAV*CATTTS Trigger: TGAGGTGGTGGTGGCGCAGCAGACTGCGATCAATTC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGGAATTGATCGCAGTCTaGTGCGCCACCACCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGELIAV*CATTTS Trigger: TGAGGTGGTGGTGGCGCAGCAGACTGCGATCAATTC...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTGTGGGCTCCCAGCCTaGCCCCTGGGAACCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSCGLPA*PLGTVG Trigger: TCCCACGGTTCCCAGGGGCCAGGCTGGGAGCCCACA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCACGAGCCGCACGTTTaGCACATGAGAGTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACHEPHV*HMRVKQ Trigger: CTGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGCATCCAGGCCGTAACTaGAAATCTATGCTAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGHPGRN*KSMLGG Trigger: CCCGCCTAGCATAGATTTGCAGTTACGGCCTGGATG...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCATCCAGGCCGTAACTaGAAATCTATGCTAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: TDGALRPIGCLKVGRAACHPGRN*KSMLGG Trigger: CCCGCCTAGCATAGATTTGCAGTTACGGCCTGGATG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTATAGTGGGGTGGCTGTaGGCTCCCAGCCTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSIVGWL*APSLAP Trigger: AGGGGCCAGGCTGGGAGCCCACAGCCACCCCACTAT...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTGCGGCATAGTGGGGTaGCTGTGGGCTCCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSCGIVG*LWAPSL Trigger: CAGGCTGGGAGCCCACAGCCACCCCACTATGCCGCA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGTGCGATGCACACGGTaGCCAAACCACGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSVRCTR*PNHGGS Trigger: GCTGCCTCCGTGGTTTGGTCACCGTGTGCATCGCAC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCTGCGTCCCATAGGCTaGCTGAAGGTGGGTAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSLRPIG*LKVGRA Trigger: CGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTTGATCGCAGTCTGCTaGGCCACCACCACCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSLIAVC*ATTTSC Trigger: ACATGAGGTGGTGGTGGCGCAGCAGACTGCGATCAA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCACGAGCCGCACGTTTaGCACATGAGAGTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILPKCLSEHECWGRRTHSHEPHV*HMRVKQ Trigger: CTGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR CCA 72 bp | GAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTaGCCACACGGCGACCGAGGGACAGATGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ERARVLGTTDPL*PHGDRGTDGAL Trigger: CAGGGCCCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CAA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCCACGAGCCGCACGTTaGCCACATGAGAGTAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: DGALRPIGCLKVGRAACGPRAAR*PHESKA Trigger: TGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTGG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGCCACGAGCCGCACGTTaGCCACATGAGAGTAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGPRAAR*PHESKA Trigger: TGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTGG...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCCACGAGCCGCACGTTaGCCACATGAGAGTAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: TDGALRPIGCLKVGRAACPRAAR*PHESKA Trigger: TGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTGG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTCTAGGTGGACCGCCTaGCCGGCTTGCACGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGSRWTA*PACTRS Trigger: GGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGA...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCGGCTCCAACGTCTCTaGGGCCCACACCGGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACRLQRL*GPHRPA Trigger: CGCGGGCCGGTGTGGGCCGCAGAGACGTTGGAGCCG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGGGGTCCGCCCGGATaGCGCTCGCTCGCCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACGGPPG*RSLACT Trigger: AGTACAGGCGAGCGAGCGGCATCCGGGCGGACCCCC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTGCGGCATAGTGGGGTaGCTGTGGGCTCCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGCGIVG*LWAPSL Trigger: CAGGCTGGGAGCCCACAGCCACCCCACTATGCCGCA...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCTCGCCTGTACTCGGGTaGGGGAGGCCCCACGACCCC | + |
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Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACSPVLG*GRPHDP Trigger: GGGGTCGTGGGGCCTCCCCCACCCGAGTACAGGCGA...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS-3UTR TCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGACGCGCTCCTGCTGGTaGGGCCCCAGACATCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGTRSCW*GPRHPA Trigger: GGCAGGATGTCTGGGGCCTCACCAGCAGGAGCGCGT...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR TCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGACAAGATGGCGGCTCTaGCGGCGGCCACGTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGTRWRL*RRPRQR Trigger: GCGCTGACGTGGCCGCCGTCAGAGCCGCCATCTTGT...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCACCTCAGAGGCTGCTaGTCCGAGCCAGGCGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGHLRGC*SEPGVG Trigger: ACCAACGCCTGGCTCGGAGCAGCAGCCTCTGAGGTG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCTGCGTCCCATAGGCTaGCTGAAGGTGGGTAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGLRPIG*LKVGRA Trigger: CGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCTCTAGGTGGACCGCCTaGCCGGCTTGCACGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACSRWTA*PACTRS Trigger: GGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGA...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGTGTGGGCTCCCAGCCTaGCCCCTGGGAACCGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGCGLPA*PLGTVG Trigger: TCCCACGGTTCCCAGGGGCCAGGCTGGGAGCCCACA...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCACGACGGACCCACTCTaGCCACACGGCGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACTTDPL*PHGDRG Trigger: CCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGT...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGACGACGGACCCACTCTaGCCACACGGCGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGTTDPL*PHGDRG Trigger: CCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGT...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTGTGGGTCTAGGTaGACCGCCTGCCCGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACGCGSR*TACPAC Trigger: GCAAGCCGGGCAGGCGGTCCACCTAGACCCACAGCC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGGGCTGTGGGTCTAGGTaGACCGCCTGCCCGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGGCGSR*TACPAC Trigger: GCAAGCCGGGCAGGCGGTCCACCTAGACCCACAGCC...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCCATCACACACAGAGGTaGGGTGCTCCCGAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGHHTQR*GAPEGL Trigger: CAGCCCCTCGGGAGCACCCCACCTCTGTGTGTGATG...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGTCGGGAGGCGAAGATaGAAGCCCCCACCACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGVGRRR*KPPPPT Trigger: TGTAGGTGGTGGGGGCTTGCATCTTCGCCTCCCGAC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCTCTCGGCCGCATTCATaGCGTTGGGGAGGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGSRPHS*RWGGPA Trigger: AGCAGGACCTCCCCAACGCCATGAATGCGGCCGAGA...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCATAGTGGGGTGGCTGTaGGCTCCCAGCCTGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACIVGWL*APSLAP Trigger: AGGGGCCAGGCTGGGAGCCCACAGCCACCCCACTAT...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCTGCGGCATAGTGGGGTaGCTGTGGGCTCCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACCGIVG*LWAPSL Trigger: CAGGCTGGGAGCCCACAGCCACCCCACTATGCCGCA...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
||
| CDS-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCCTCACCTCAGAGGCTaGTGCTCCGAGCCAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACPHLRG*CSEPGV Trigger: AACGCCTGGCTCGGAGCAGCAGCCTCTGAGGTGAGG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCATCACACACAGAGGTaGGGTGCTCCCGAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACHHTQR*GAPEGL Trigger: CAGCCCCTCGGGAGCACCCCACCTCTGTGTGTGATG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
||
| CDS-3UTR GCA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGAATTGATCGCAGTCTaGTGCGCCACCACCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGALRPIGCLKVGRAACGELIAV*CATTTS Trigger: TGAGGTGGTGGTGGCGCAGCAGACTGCGATCAATTC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCAGCGAGCACGAGTGTTaGGGACGACGGACCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACSEHEC*GRRTHS Trigger: AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCT...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
||
| CDS-3UTR TCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGTCCTGCCAAAGTGTCTaGGCGAGCACGAGTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGSCQSV*ASTSVG Trigger: CCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGA...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGCCAGGCGTTGGTTTTaGTCCCACAAGATGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACARRWF*SHKMAA Trigger: AGCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGC...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTCTAGGTGGACCGCCTaGCCGGCTTGCACGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSSRWTA*PACTRS Trigger: GGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCTCCGAGCCAGGCGTTaGTTTTGCTCCCACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACLRARR*FCSHKM Trigger: CATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGGGGAACAGCTGGGCTaGCGACTGGCATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSGEQLG*RLASRP Trigger: CGGCCTGGATGCCAGTCGCCAGCCCAGCTGTTCCCC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTACGACGGACCCACTCTaGCCACACGGCGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSTTDPL*PHGDRG Trigger: CCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGT...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGGCTGTGGGTCTAGGTaGACCGCCTGCCCGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSGCGSR*TACPAC Trigger: GCAAGCCGGGCAGGCGGTCCACCTAGACCCACAGCC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR TCA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCCTATGGAATGCAGGGTaGCCCAAGGACAAGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDGALRPIGCLKVGRAACLWNAG*PKDKRV Trigger: AACTCGCTTGTCCTTGGGTCACCCTGCATTCCATAG...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGCAAACACGAACTGGATaGAGTCGGGAGGCGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGQTRTG*SREAKM Trigger: CATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTG...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCACCTCAGAGGCTGCTaGTCCGAGCCAGGCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSHLRGC*SEPGVG Trigger: ACCAACGCCTGGCTCGGAGCAGCAGCCTCTGAGGTG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGGACACCTCAGAGGCTaGTGCTCCGAGCCAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSGHLRG*CSEPGV Trigger: AACGCCTGGCTCGGAGCAGCAGCCTCTGAGGTGTCC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272102.10 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCATCACACACAGAGGTaGGGTGCTCCCGAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSHHTQR*GAPEGL Trigger: CAGCCCCTCGGGAGCACCCCACCTCTGTGTGTGATG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTCTCGGCCGCATTCATaGCGTTGGGGAGGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSSRPHS*RWGGPA Trigger: AGCAGGACCTCCCCAACGCCATGAATGCGGCCGAGA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTAGCGAGCACGAGTGTTaGGGACGACGGACCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSSEHEC*GRRTHS Trigger: AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCT...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR TCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTTCCTGCCAAAGTGTCTaGGCGAGCACGAGTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSSCQSV*ASTSVG Trigger: CCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGA...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGAATTGATCGCAGTCTaGTGCGCCACCACCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSELIAV*CATTTS Trigger: TGAGGTGGTGGTGGCGCAGCAGACTGCGATCAATTC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCTCCGAGCCAGGCGTTaGTTTTGCTCCCACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSLRARR*FCSHKM Trigger: CATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS-3UTR TCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCTATGGAATGCAGGGTaGCCCAAGGACAAGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSLWNAG*PKDKRV Trigger: AACTCGCTTGTCCTTGGGTCACCCTGCATTCCATAG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR GCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCATCCAGGCCGTAACTaGAAATCTATGCTAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSHPGRN*KSMLGG Trigger: CCCGCCTAGCATAGATTTGCAGTTACGGCCTGGATG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTACAGCAAACACGAACTaGATGGAGTCGGGAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPKCLSEHECWGRRTHSTANTN*MESGGE Trigger: TTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGT...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS TCA 90 bp | TGCTCCGAGCCAGGCGTTGGTTTTGCTCCCACAAGATGGCGGCTCTaGCGGCGGCCACGTCAGCGCCTCCGGGCGCGGGGCACGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSEPGVGFAPTRWRL*RRPRQRLRARGTPG Trigger: ACCCGGCGTGCCCCGCGCCCGGAGGCGCTGACGTGGCCGCCGTCAGAGCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS-3UTR CAA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGAGCGAGCACGAGTGTaGGGGACGACGGACCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: DGALRPIGCLKVGRAACGERARV*GTTDPL Trigger: GAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS-3UTR CAA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCACCACCTACATGACCTaGACGGCGTCTCAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DGALRPIGCLKVGRAACGTTYMT*TASQAA Trigger: GGCGGCCTGAGACGCCGTCAAGGTCATGTAGGTGGT...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541182.1 |
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| CDS-3UTR CAA 90 bp | GTGTTGGGGACGACGGACCCACTCTGGCCACACGGCGACCGAGGGACAGATGGGGAGCGAGCACGAGTGTaGGGGACGACGGACCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGTTDPLWPHGDRGTDGERARV*GTTDPL Trigger: GAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTC...CCCATCTGTCCCTCGGTCGCCGTGTGGCCAGAGTGGGTCCGTCGTCCCCAACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
||
| CDS-3UTR CAA 90 bp | GATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCGGCGCTCCGAGCCAGGCGTaGGTTTTGCTCCCACAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGALRPIGCLKVGRAACGAPSQA*VLLPQD Trigger: ATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAGC...GCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS TCA 90 bp | GGGCACGGGGTTCCTGTCCACCTGCCCGCCCGCTCTCACCACCCCTaGCCCGGTACCGTCTTCACAGCAAACACGAACTGGATGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GHGVPVHLPARSHHP*PGTVFTANTNWMES Trigger: CGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTACCGGGTCAGGGGTGGTGAGAGCGGGCGGGCAGGTGGACAGGAACCCCGTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477451.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGGGCCCTGCGTCCCATAGGCTGCCTGAAGGTGGGTAGGGCGGCCTGCAGCCAGGCGTTGGTTTaGCTCCCACAAGATGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDGALRPIGCLKVGRAACSQALV*LPQDGG Trigger: GCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGCT...GCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAGGGCCCCATCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGAGCGAGCACGAGTGTaGGGGACGACGGACCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ILPKCLSEHECWGRRTHSERARV*GTTDPL Trigger: GAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS CCA 90 bp | ACCACCCCTGACCCGGTACCGTCTTCACAGCAAACACGAACTGGATaGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACCTACATGACC | + |
|
Preference number: 5 (lower is better) Translates to: TTPDPVPSSQQTRTG*SREAKMQAPTTYMT Trigger: GGTCATGTAGGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTACCGGGTCAGGGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477451.5 |
||
| CDS CCA 90 bp | GGACACTGGCCAGGGACACCGTCTTCACAGCAAACACGAACTGGATaGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACCTACATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GHWPGTPSSQQTRTG*SREAKMQAPTTYMT Trigger: GGTCATGTAGGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTGTCCCTGGCCAGTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478336.5 ENST00000541182.1 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTAGCCAGGCGTTGGTTTaGCTCCCACAAGATGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILPKCLSEHECWGRRTHSSQALV*LPQDGG Trigger: GCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGCT...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
||
| CDS TCA 90 bp | CCCGGGCCACTCCTTCACATCTCTGCTCACATGGCACCTGTCAAATaGCACTCAGCCCCTTCCGGATGGTCCTGGTATCTCCCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPLLHISAHMAPVK*HSAPSGWSWYLPAF Trigger: GAAGGCAGGGAGATACCAGGACCATCCGGAAGGGGCTGAGTGTCATTTGACAGGTGCCATGTGAGCAGAGATGTGAAGGAGTGGCCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497165.5 |
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| CDS CCA 90 bp | GGAAGGACACTGGCCAGGGACACCGTCTTCACAGCAAACACGAACTaGATGGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACCTACAT | + |
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Preference number: 5 (lower is better) Translates to: GRTLARDTVFTANTN*MESGGEDASPHHLH Trigger: ATGTAGGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTGTCCCTGGCCAGTGTCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478336.5 ENST00000541182.1 |
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| CDS CCA 90 bp | ACCAGTATTTCTACTCTGGCAGGCAGGGTGCAGTTGGCCTCTACCTaGCCCCCAGTGCAGTGGCTGATGGACTGGCCACTGGGAAAACCA | + |
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Preference number: 5 (lower is better) Translates to: TSISTLAGRVQLAST*PPVQWLMDWPLGKP Trigger: TGGTTTTCCCAGTGGCCAGTCCATCAGCCACTGCACTGGGGGCCAGGTAGAGGCCAACTGCACCCTGCCTGCCAGAGTAGAAATACTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS-3UTR CAA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTGCTCCGAGCCAGGCGTaGGTTTTGCTCCCACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: ILPKCLSEHECWGRRTHSAPSQA*VLLPQD Trigger: ATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAGC...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272102.10 ENST00000540651.5 |
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| CDS TCA 90 bp | CCACACACCAGGTGGACTCCCAGGGCTGCTGAAGGCAGTGTCTCATaGCCTCTGACCACAGCTACAATGAAGGACTTGCACTGGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PHTRWTPRAAEGSVS*PLTTATMKDLHWLC Trigger: GCACAGCCAGTGCAAGTCCTTCATTGTAGCTGTGGTCAGAGGTCATGAGACACTGCCTTCAGCAGCCCTGGGAGTCCACCTGGTGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 90 bp | TCTGCCCTGATTGTCCCGGGCCACTCCTTCACATCTCTGCTCACATaGCACCTGTCAAATGACACTCAGCCCCTTCCGGATGGTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SALIVPGHSFTSLLT*HLSNDTQPLPDGPG Trigger: ACCAGGACCATCCGGAAGGGGCTGAGTGTCATTTGACAGGTGCCATGTGAGCAGAGATGTGAAGGAGTGGCCCGGGACAATCAGGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497165.5 |
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| CDS-3UTR CAA 90 bp | ATCCTGCCAAAGTGTCTGAGCGAGCACGAGTGTTGGGGACGACGGACCCACTCTCCACGAGCCGCACGTTaGCCACATGAGAGTAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ILPKCLSEHECWGRRTHSPRAAR*PHESKA Trigger: TGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTGG...AGAGTGGGTCCGTCGTCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272102.10 ENST00000540651.5 ENST00000541182.1 |
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| CDS CCA 90 bp | TGTCCATGGATGCTTACACAAGGACATGGAAGGGGCAGCAGAGCCTaGGGCCTACCAGTATTTCTACTCTGGCAGGCAGGGTGCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: CPWMLTQGHGRGSRA*GLPVFLLWQAGCSW Trigger: CCAACTGCACCCTGCCTGCCAGAGTAGAAATACTGGTAGGCCCCAGGCTCTGCTGCCCCTTCCATGTCCTTGTGTAAGCATCCATGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 90 bp | CACAGCTACAATGAAGGACTTGCACTGGCTGTGCACATGGCATCATaGCAAATGCTCTCCAGTCCTTTGTGCTGCCCCAGCCCTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HSYNEGLALAVHMAS*QMLSSPLCCPSPAL Trigger: GAGAGCAGGGCTGGGGCAGCACAAAGGACTGGAGAGCATTTGCCATGATGCCATGTGCACAGCCAGTGCAAGTCCTTCATTGTAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 90 bp | CCTCTGACCACAGCTACAATGAAGGACTTGCACTGGCTGTGCACATaGCATCATGGCAAATGCTCTCCAGTCCTTTGTGCTGCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PLTTATMKDLHWLCT*HHGKCSPVLCAAPA Trigger: GGCTGGGGCAGCACAAAGGACTGGAGAGCATTTGCCATGATGCCATGTGCACAGCCAGTGCAAGTCCTTCATTGTAGCTGTGGTCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS TCA 90 bp | AGATGCACAGCTCTAACCACACACCAGGTGGACTCCCAGGGCTGCTaGAGGCAGTGTCTCATGACCTCTGACCACAGCTACAATGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RCTALTTHQVDSQGC*RQCLMTSDHSYNEG Trigger: TCCTTCATTGTAGCTGTGGTCAGAGGTCATGAGACACTGCCTTCAGCAGCCCTGGGAGTCCACCTGGTGTGTGGTTAGAGCTGTGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS GCA 90 bp | GTGTTACTTCAAAGCACCTCACCAAACGTAAGTCCTTCTGAAATCTaGAGATGCACAGCTCTAACCACACACCAGGTGGACTCCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLLQSTSPNVSPSEI*RCTALTTHQVDSQG Trigger: GCCCTGGGAGTCCACCTGGTGTGTGGTTAGAGCTGTGCATCTGCAGATTTCAGAAGGACTTACGTTTGGTGAGGTGCTTTGAAGTAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS TCA 72 bp | CCAGGCGTTGGTTTTGCTCCCACAAGATGGCGGCTCTaGCGGCGGCCACGTCAGCGCCTCCGGGCGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PGVGFAPTRWRL*RRPRQRLRARG Trigger: GCCCCGCGCCCGGAGGCGCTGACGTGGCCGCCGTCAGAGCCGCCATCTTGTGGGAGCAAAACCAACGCCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS GCA 72 bp | GAGCCCTGCGGAGACTCCAGCAGGAAGGGCCTCCACTaGCCAGACGCCTCTCAAGTCGCCCCGAGGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: EPCGDSSRKGLH*PDASQVAPRPV Trigger: GACTGGCCTCGGGGCGACTTGAGAGGCGTCTGGGCAGTGGAGGCCCTTCCTGCTGGAGTCTCCGCAGGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473949.5 |
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| CDS CAA 90 bp | TGGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACCTACATGACCTaGACGGCGTCTCAGGCCGCCCGAGCCTCAGTTTCCCGGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: WSREAKMQAPTTYMT*TASQAARASVSRSP Trigger: CGGGGACCGGGAAACTGAGGCTCGGGCGGCCTGAGACGCCGTCAAGGTCATGTAGGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000473546.1 ENST00000477451.5 ENST00000478336.5 ENST00000482962.5 ENST00000541182.1 |
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| CDS TCA 72 bp | GGTTTCCACGTTGAAGCCTGGGTGCGGGATGCAGGGTaGGGCCTTGTACCTTGGCCCAGCCCAGCCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GFHVEAWVRDAG*GLVPWPSPAQP Trigger: GGGCTGGGCTGGGCTGGGCCAAGGTACAAGGCCTCACCCTGCATCCCGCACCCAGGCTTCAACGTGGAAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470670.5 |
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| CDS GCA 72 bp | CCTCAGAGGCTGCTGCTCCGAGCCAGGCGTTGGTTTTaGTCCCACAAGATGGCGGCTCTGACGGCGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: PQRLLLRARRWF*SHKMAALTAAT Trigger: CGTGGCCGCCGTCAGAGCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGCTCGGAGCAGCAGCCTCTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540651.5 |
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| CDS CCA 72 bp | GGACACTGGCCAGGGACACCCCAAATTGCGTCTCACTaGTGTGAAGGGAGGCACTCTGGGCTCCCCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GHWPGTPQIASH*CEGRHSGLPRR Trigger: CCTCCGGGGGAGCCCAGAGTGCCTCCCTTCACACCAGTGAGACGCAATTTGGGGTGTCCCTGGCCAGTGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477451.5 |
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| CDS CAA 90 bp | AGCCTGGGGCCTACCAGTATTTCTACTCTGGCAGGCAGGGTGCAGTaGGCCTCTACCTGGCCCCCAGTGCAGTGGCTGATGGACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLGPTSISTLAGRVQ*ASTWPPVQWLMDWP Trigger: TGGCCAGTCCATCAGCCACTGCACTGGGGGCCAGGTAGAGGCCAACTGCACCCTGCCTGCCAGAGTAGAAATACTGGTAGGCCCCAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 72 bp | TGGTCCTGGTATCTCCCTGCCTTCCCTCCACCAGTGTaGGCAGCTCTGTGTGGCACTCACCGTCACAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: WSWYLPAFPPPV*AALCGTHRHSH Trigger: GTGGCTGTGACGGTGAGTGCCACACAGAGCTGCCCACACTGGTGGAGGGAAGGCAGGGAGATACCAGGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497165.5 |
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| CDS CCA 72 bp | GACCCGGTACCGTCTTCACAGCAAACACGAACTGGATaGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: DPVPSSQQTRTG*SREAKMQAPTT Trigger: GGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTACCGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477451.5 |
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| CDS CCA 72 bp | CCAGGGACACCGTCTTCACAGCAAACACGAACTGGATaGAGTCGGGAGGCGAAGATGCAAGCCCCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: PGTPSSQQTRTG*SREAKMQAPTT Trigger: GGTGGTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTGTCCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478336.5 ENST00000541182.1 |
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| CDS CCA 72 bp | CTGGCCAGGGACACCGTCTTCACAGCAAACACGAACTaGATGGAGTCGGGAGGCGAAGATGCAAGCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LARDTVFTANTN*MESGGEDASPH Trigger: GTGGGGGCTTGCATCTTCGCCTCCCGACTCCATCCAGTTCGTGTTTGCTGTGAAGACGGTGTCCCTGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478336.5 ENST00000541182.1 |
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| CDS CAA 72 bp | CCTACCAGTATTTCTACTCTGGCAGGCAGGGTGCAGTaGGCCTCTACCTGGCCCCCAGTGCAGTGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: PTSISTLAGRVQ*ASTWPPVQWLM Trigger: CATCAGCCACTGCACTGGGGGCCAGGTAGAGGCCAACTGCACCCTGCCTGCCAGAGTAGAAATACTGGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS TCA 72 bp | GCTCTAACCACACACCAGGTGGACTCCCAGGGCTGCTaGAGGCAGTGTCTCATGACCTCTGACCACAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: ALTTHQVDSQGC*RQCLMTSDHSY Trigger: GTAGCTGTGGTCAGAGGTCATGAGACACTGCCTTCAGCAGCCCTGGGAGTCCACCTGGTGTGTGGTTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 72 bp | ATGCTTACACAAGGACATGGAAGGGGCAGCAGAGCCTaGGGCCTACCAGTATTTCTACTCTGGCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MLTQGHGRGSRA*GLPVFLLWQAG Trigger: CCCTGCCTGCCAGAGTAGAAATACTGGTAGGCCCCAGGCTCTGCTGCCCCTTCCATGTCCTTGTGTAAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 72 bp | TGCAGCTGTGCACACCCCGTGAGTCAGCTTTGTCCATaGATGCTTACACAAGGACATGGAAGGGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: CSCAHPVSQLCP*MLTQGHGRGSR Trigger: TCTGCTGCCCCTTCCATGTCCTTGTGTAAGCATCCATGGACAAAGCTGACTCACGGGGTGTGCACAGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 72 bp | ATTGTCCCGGGCCACTCCTTCACATCTCTGCTCACATaGCACCTGTCAAATGACACTCAGCCCCTTCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: IVPGHSFTSLLT*HLSNDTQPLPD Trigger: ATCCGGAAGGGGCTGAGTGTCATTTGACAGGTGCCATGTGAGCAGAGATGTGAAGGAGTGGCCCGGGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497165.5 |
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| CDS TCA 72 bp | CTCCTTCACATCTCTGCTCACATGGCACCTGTCAAATaGCACTCAGCCCCTTCCGGATGGTCCTGGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHISAHMAPVK*HSAPSGWSWYL Trigger: GAGATACCAGGACCATCCGGAAGGGGCTGAGTGTCATTTGACAGGTGCCATGTGAGCAGAGATGTGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497165.5 |
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| CDS CCA 72 bp | AATGAAGGACTTGCACTGGCTGTGCACATGGCATCATaGCAAATGCTCTCCAGTCCTTTGTGCTGCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: NEGLALAVHMAS*QMLSSPLCCPS Trigger: GCTGGGGCAGCACAAAGGACTGGAGAGCATTTGCCATGATGCCATGTGCACAGCCAGTGCAAGTCCTTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS GCA 72 bp | CTGACCACAGCTACAATGAAGGACTTGCACTGGCTGTaGACATGGCATCATGGCAAATGCTCTCCAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LTTATMKDLHWL*TWHHGKCSPVL Trigger: AAGGACTGGAGAGCATTTGCCATGATGCCATGTGCACAGCCAGTGCAAGTCCTTCATTGTAGCTGTGGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS GCA 72 bp | ACCTCACCAAACGTAAGTCCTTCTGAAATCTGCAGATaGACAGCTCTAACCACACACCAGGTGGACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSPNVSPSEICR*TALTTHQVDSQ Trigger: CTGGGAGTCCACCTGGTGTGTGGTTAGAGCTGTGCATCTGCAGATTTCAGAAGGACTTACGTTTGGTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS CCA 72 bp | ACAGCTACAATGAAGGACTTGCACTGGCTGTGCACATaGCATCATGGCAAATGCTCTCCAGTCCTTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TATMKDLHWLCT*HHGKCSPVLCA Trigger: AGCACAAAGGACTGGAGAGCATTTGCCATGATGCCATGTGCACAGCCAGTGCAAGTCCTTCATTGTAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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| CDS TCA 72 bp | GTTACTTCAAAGCACCTCACCAAACGTAAGTCCTTCTaGAATCTGCAGATGCACAGCTCTAACCACACACCA | + |
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Preference number: 6 (lower is better) Translates to: VTSKHLTKRKSF*NLQMHSSNHTP Trigger: TGGTGTGTGGTTAGAGCTGTGCATCTGCAGATTTCAGAAGGACTTACGTTTGGTGAGGTGCTTTGAAGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490705.1 |
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